Pregenerated sensors for LINS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053091Ensembl transcript IDs: ENSMUST00000065323.14, ENSMUST00000077967.13, ENSMUST00000121777.9, ENSMUST00000130161.9, ENSMUST00000132351.8, ENSMUST00000133199.3, ENSMUST00000133771.9, ENSMUST00000153007.2, ENSMUST00000153773.2
Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCCATTAGCTGGCACTGGGAGAGTTTCCTTGGGCATCATGACCTaGCTCTGGGATTCGGAGGAGGCATCAGAAGCCCAGGGGAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: GPLAGTGRVSLGIMT*LWDSEEASEAQGSQ Trigger: CTGGCTCCCCTGGGCTTCTGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCCAGTGCCAGCTAATGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR CCA 90 bp | TTAGCTGGCACTGGGAGAGTTTCCTTGGGCATCATGACCTGGCTCTaGGATTCGGAGGAGGCATCAGAAGCCCAGGGGAGCCAGGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LAGTGRVSLGIMTWL*DSEEASEAQGSQGQ Trigger: TTGCCCCTGGCTCCCCTGGGCTTCTGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCCAGTGCCAGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR TCA 90 bp | TCAGGGAGGCTTTGGCAGCCTCCAGCATGTCATCGTCCTGCTCTATaGAGACCCTGGACAGCCACTCGCATGGGTTGTGTGGCTGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: SGRLWQPPACHRPAL*RPWTATRMGCVAVE Trigger: CTCTACAGCCACACAACCCATGCGAGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATGACATGCTGGAGGCTGCCAAAGCCTCCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR TCA 90 bp | GACAGCCACTCGCATGGGTTGTGTGGCTGTAGAGAGGGCTGGAGGTaGGGCTTTAAGAAGGCCAGTAGCTCGGACATGAACGTCTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: DSHSHGLCGCREGWR*GFKKASSSDMNVCK Trigger: CTTGCAGACGTTCATGTCCGAGCTACTGGCCTTCTTAAAGCCTCACCTCCAGCCCTCTCTACAGCCACACAACCCATGCGAGTGGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR GCA 90 bp | GAACTGGACTCTGCAGAGAGCAAAGGCTCCAGGCTATGTTCCTTTTaGTCCTCCCATGTCCTAGGCAGGCCCTGGATCTCCTCAGACCTT | + |
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Preference number: 1 (lower is better) Translates to: ELDSAESKGSRLCSF*SSHVLGRPWISSDL Trigger: AAGGTCTGAGGAGATCCAGGGCCTGCCTAGGACATGGGAGGAGCAAAAGGAACATAGCCTGGAGCCTTTGCTCTCTGCAGAGTCCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR CCA 90 bp | TTCGGAGCTGTCATAATCTACCAGACTCTGCGGTGTCCGGGAAGGTaGGCCATTAGCTGGCACTGGGAGAGTTTCCTTGGGCATCATGAC | + |
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Preference number: 1 (lower is better) Translates to: FGAVIIYQTLRCPGR*AISWHWESFLGHHD Trigger: GTCATGATGCCCAAGGAAACTCTCCCAGTGCCAGCTAATGGCCCACCTTCCCGGACACCGCAGAGTCTGGTAGATTATGACAGCTCCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR GCA 90 bp | GTCTGCAGCAACTCTACCCTTGGCAGAGAAGGGAGAACTGGACTCTaGAGAGAGCAAAGGCTCCAGGCTATGTTCCTTTTGCTCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: VCSNSTLGREGRTGL*REQRLQAMFLLLLP Trigger: TGGGAGGAGCAAAAGGAACATAGCCTGGAGCCTTTGCTCTCTGCAGAGTCCAGTTCTCCCTTCTCTGCCAAGGGTAGAGTTGCTGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR CCA 90 bp | CAGTCCCGTCTGCAGCAACTCTACCCTTGGCAGAGAAGGGAGAACTaGACTCTGCAGAGAGCAAAGGCTCCAGGCTATGTTCCTTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: QSRLQQLYPWQRREN*TLQRAKAPGYVPFA Trigger: AGCAAAAGGAACATAGCCTGGAGCCTTTGCTCTCTGCAGAGTCCAGTTCTCCCTTCTCTGCCAAGGGTAGAGTTGCTGCAGACGGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR TCA 90 bp | CTGGGACAGGAGATGATACTGGGAGTCTATGGGGGTGACCCTAACTaGGATTCCTACCAGACGGGGATAAAGAGACTGAAGAGGCCACCT | + |
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Preference number: 1 (lower is better) Translates to: LGQEMILGVYGGDPN*DSYQTGIKRLKRPP Trigger: AGGTGGCCTCTTCAGTCTCTTTATCCCCGTCTGGTAGGAATCTCAGTTAGGGTCACCCCCATAGACTCCCAGTATCATCTCCTGTCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR GCA 90 bp | AACACAGTGAGGGTTACAGCCATGTCCATGTGTGGAGCGGATCCATaGTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCT | + |
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Preference number: 1 (lower is better) Translates to: NTVRVTAMSMCGADP*FLFLGQTCRSIPLS Trigger: AGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATCCGCTCCACACATGGACATGGCTGTAACCCTCACTGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR GCA 90 bp | TTTCCAGAAACAGCCAGTGCCTTCCACAACCCCACATGTACAGCGTaGAGAAGTGTGTCAGCTAAAGTGAGCATGTCACTGTCCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: FPETASAFHNPTCTA*RSVSAKVSMSLSRR Trigger: CCTTCTGGACAGTGACATGCTCACTTTAGCTGACACACTTCTGCACGCTGTACATGTGGGGTTGTGGAAGGCACTGGCTGTTTCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR GCA 90 bp | CACCCACAAAGTCGTCAACACAAAATCTGTCCTGCTTACAAGACGTaGAGGGATAAAGATGGAGGAGAGACAGAGGGAACAGCCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: HPQSRQHKICPAYKT*RDKDGGETEGTATS Trigger: GCTGGTGGCTGTTCCCTCTGTCTCTCCTCCATCTTTATCCCTGCACGTCTTGTAAGCAGGACAGATTTTGTGTTGACGACTTTGTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR CCA 90 bp | GGTTTCAAAAATAGCATCCTCTGGCTCCTGAAGTGCAGTTTCAGGTaGATTCTGGAGGCTACGAGAAGCTCAAGCAGCTCCAGAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: GFKNSILWLLKCSFR*ILEATRSSSSSRKH Trigger: GTGCTTTCTGGAGCTGCTTGAGCTTCTCGTAGCCTCCAGAATCCACCTGAAACTGCACTTCAGGAGCCAGAGGATGCTATTTTTGAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR GCA 90 bp | GGCCAGTTGACCTGTCATGGGATGGTCCTTTCTCAAACACTACTATaGTCCATAAGGCAAAGACCCAGACACGCATGTTTGCAGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: GQLTCHGMVLSQTLL*SIRQRPRHACLQFL Trigger: CAAGAACTGCAAACATGCGTGTCTGGGTCTTTGCCTTATGGAGCATAGTAGTGTTTGAGAAAGGACCATCCCATGACAGGTCAACTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR CCA 90 bp | TGTGTAAATCTCACTCAGAAGGGGGAAATAGATAGCCACTGGAGGTaGATGAAGAGAGAAGACGGCGTGAGGAGGGAAGCAATCATGTCA | + |
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Preference number: 1 (lower is better) Translates to: CVNLTQKGEIDSHWR*MKREDGVRREAIMS Trigger: TGACATGATTGCTTCCCTCCTCACGCCGTCTTCTCTCTTCATCCACCTCCAGTGGCTATCTATTTCCCCCTTCTGAGTGAGATTTACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR CCA 90 bp | CAGGCAAGAATATCTAGAGCATGGGGTTTCAAAAATAGCATCCTCTaGCTCCTGAAGTGCAGTTTCAGGTGGATTCTGGAGGCTACGAGA | + |
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Preference number: 1 (lower is better) Translates to: QARISRAWGFKNSIL*LLKCSFRWILEATR Trigger: TCTCGTAGCCTCCAGAATCCACCTGAAACTGCACTTCAGGAGCCAGAGGATGCTATTTTTGAAACCCCATGCTCTAGATATTCTTGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR CCA 90 bp | AGAAGAATAAGAAAACACAGTGAGGGTTACAGCCATGTCCATGTGTaGAGCGGATCCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAG | + |
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Preference number: 1 (lower is better) Translates to: RRIRKHSEGYSHVHV*SGSMLPFLGSDLPK Trigger: CTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATCCGCTCCACACATGGACATGGCTGTAACCCTCACTGTGTTTTCTTATTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR GCA 90 bp | CAAAACAGAAGAGAAAATAACCATGGTAGCAAACGATGCAGAGCGTaGAGAGATGGAGATGCATCATGGATAAGATGTGCAGCGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: QNRRENNHGSKRCRA*RDGDASWIRCAASQ Trigger: CTGGGACGCTGCACATCTTATCCATGATGCATCTCCATCTCTGCACGCTCTGCATCGTTTGCTACCATGGTTATTTTCTCTTCTGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR GCA 90 bp | GGCCCTGGATCTCCTCAGACCTTTCTTGACATAAAGATGTCTGTTTaGTGTTTGCTAAATGCTCACTTGTGGTTTCCTCCTCAGAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GPGSPQTFLDIKMSV*CLLNAHLWFPPQKL Trigger: AAGCTTCTGAGGAGGAAACCACAAGTGAGCATTTAGCAAACAGCAAACAGACATCTTTATGTCAAGAAAGGTCTGAGGAGATCCAGGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR GCA 90 bp | GACGTTAACACACTTGGCCTCCACACCTTTCAACAACTTCAGAAGTaGCGCTGGGTTATATGGAAAGAGATTTTTCTCCTGCAAACGGTA | + |
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Preference number: 1 (lower is better) Translates to: DVNTLGLHTFQQLQK*RWVIWKEIFLLQTV Trigger: TACCGTTTGCAGGAGAAAAATCTCTTTCCATATAACCCAGCGGCACTTCTGAAGTTGTTGAAAGGTGTGGAGGCCAAGTGTGTTAACGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR TCA 90 bp | GTAGAATCGAATGCTACATTCTTCAAGAAGAATAAGAAAACACAGTaGGGGTTACAGCCATGTCCATGTGTGGAGCGGATCCATGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: VESNATFFKKNKKTQ*GLQPCPCVERIHAS Trigger: GGAAGCATGGATCCGCTCCACACATGGACATGGCTGTAACCCTCACTGTGTTTTCTTATTCTTCTTGAAGAATGTAGCATTCGATTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR TCA 90 bp | TCACCAACATGTCTCCCTAACCGTTTTGACATCCACACTTCTATTTaGCTAGGCTTTTCTGCCTTAAGACAGGGTTTCTTCCTCAACTTG | + |
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Preference number: 1 (lower is better) Translates to: SPTCLPNRFDIHTSI*LGFSALRQGFFLNL Trigger: CAAGTTGAGGAAGAAACCCTGTCTTAAGGCAGAAAAGCCTAGTCAAATAGAAGTGTGGATGTCAAAACGGTTAGGGAGACATGTTGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR TCA 90 bp | TTCACAGACCCAAAGATACTGGGTAATAAAGTAGGTCCCAAGGAATaGTGTGTAAATCTCACTCAGAAGGGGGAAATAGATAGCCACTGG | + |
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Preference number: 1 (lower is better) Translates to: FTDPKILGNKVGPKE*CVNLTQKGEIDSHW Trigger: CCAGTGGCTATCTATTTCCCCCTTCTGAGTGAGATTTACACATCATTCCTTGGGACCTACTTTATTACCCAGTATCTTTGGGTCTGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR CCA 90 bp | CAGTGCAACCAGAACTTATCTTGTGTGAGTGTAAGTGAATCTAGGTaGATGTATGTAGGCTGTATGAAGATCGCATGCTGTTTTATAAAG | + |
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Preference number: 1 (lower is better) Translates to: QCNQNLSCVSVSESR*MYVGCMKIACCFIK Trigger: CTTTATAAAACAGCATGCGATCTTCATACAGCCTACATACATCCACCTAGATTCACTTACACTCACACAAGATAAGTTCTGGTTGCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR GCA 90 bp | GTAAGTGAATCTAGGTGGATGTATGTAGGCTGTATGAAGATCGCATaGTGTTTTATAAAGAGACTGTCAGTAGATTTTGGTTTCATGATA | + |
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Preference number: 1 (lower is better) Translates to: VSESRWMYVGCMKIA*CFIKRLSVDFGFMI Trigger: TATCATGAAACCAAAATCTACTGACAGTCTCTTTATAAAACAGCATGCGATCTTCATACAGCCTACATACATCCACCTAGATTCACTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAGAGTTTCCTTGGGCATCATGACCTGGCTCTGGGATTCGGAGGAGGCATCACATCGTCCTGCTCTATaGAGACCCTGGACAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: GRVSLGIMTWLWDSEEASHRPAL*RPWTAT Trigger: AGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATG...TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTCGGTGTCCGGGAAGGTaGGCCATTAGCTGGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: KAEDRCCCVTQGSDVNTLRCPGR*AISWHW Trigger: CCAGTGCCAGCTAATGGCCCACCTTCCCGGACACCG...AAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR CAA 90 bp | AACAATCCCACTTGCCAGACAGTCCCGTCTGCAGCAACTCTACCCTaGGCAGAGAAGGGAGAACTGGACTCTGCAGAGAGCAAAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: NNPTCQTVPSAATLP*AEKGELDSAESKGS Trigger: GGAGCCTTTGCTCTCTGCAGAGTCCAGTTCTCCCTTCTCTGCCAAGGGTAGAGTTGCTGCAGACGGGACTGTCTGGCAAGTGGGATTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR GCA 90 bp | GGGACCATGGATGTTATGGAGCCTGGGCCACAACCAGGGAGCTTTCAGAGGCTGAGGCTATGTTCCTTTTaGTCCTCCCATGTCCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: GTMDVMEPGPQPGSFQRLRLCSF*SSHVLG Trigger: GCCTAGGACATGGGAGGAGCAAAAGGAACATAGCCT...CAGCCTCTGAAAGCTCCCTGGTTGTGGCCCAGGCTCCATAACATCCATGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGTTTCCTTGGGCATCATGACCTGGCTCTGGGATTCGGAGGAGGCATCAAAGCATCCCACTCTCTaGTCAGCTGGAGGTAGATGC | + |
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Preference number: 2 (lower is better) Translates to: GRVSLGIMTWLWDSEEASKHPTL*SAGGRC Trigger: GCATCTACCTCCAGCTGACCAGAGAGTGGGATGCTT...TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCATGTCATCGTCCTGCTCTATGAAGACCCTGGACAGCCACTCGCATGGGTTGATCAGGACCAGTCCTaGGTCTGCATCCAGGTTGAA | + |
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Preference number: 2 (lower is better) Translates to: QHVIVLLYEDPGQPLAWVDQDQS*VCIQVE Trigger: TTCAACCTGGATGCAGACTCAGGACTGGTCCTGATC...AACCCATGCGAGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATGACATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR GCA 90 bp | CATGATAGGGGTAGCGATGGGTCCTGGAAGCCATGCCTCTGGATACCAAAAGGTGGGAGAACTGGACTCTaGAGAGAGCAAAGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HDRGSDGSWKPCLWIPKGGRTGL*REQRLQ Trigger: CTGGAGCCTTTGCTCTCTGCAGAGTCCAGTTCTCCC...ACCTTTTGGTATCCAGAGGCATGGCTTCCAGGACCCATCGCTACCCCTATCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR-3UTR CCA 90 bp | GATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACACCTATCATGACCTGGCTCTaGGATTCGGAGGAGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: DAAVLPRAQTLTHLASTPIMTWL*DSEEAS Trigger: TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGAT...AGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR CCA 90 bp | GGGACCATGGATGTTATGGAGCCTGGGCCACAACCAGGGAGCTTTCAGAGGCTGCAGAGCGTGCAGAGATaGAGATGCATCATGGATAAG | + |
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Preference number: 2 (lower is better) Translates to: GTMDVMEPGPQPGSFQRLQSVQR*RCIMDK Trigger: CTTATCCATGATGCATCTCCATCTCTGCACGCTCTG...CAGCCTCTGAAAGCTCCCTGGTTGTGGCCCAGGCTCCATAACATCCATGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR-3UTR TCA 90 bp | ATGATAGGGGTAGCGATGGGTCCTGGAAGCCATGCCTCTGGATACCAAAAGGTAGCATCCTCTGGCTCCTaGAGTGCAGTTTCAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: MIGVAMGPGSHASGYQKVASSGS*SAVSGG Trigger: TCCACCTGAAACTGCACTTCAGGAGCCAGAGGATGC...TACCTTTTGGTATCCAGAGGCATGGCTTCCAGGACCCATCGCTACCCCTATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTTTCCTCCTCAGAAGCTTCGGAGCTGTCATAATCTACCAGACTCTGCGGGCATCCTCTGGCTCCTaGAGTGCAGTTTCAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: CGFLLRSFGAVIIYQTLRASSGS*SAVSGG Trigger: TCCACCTGAAACTGCACTTCAGGAGCCAGAGGATGC...CCGCAGAGTCTGGTAGATTATGACAGCTCCGAAGCTTCTGAGGAGGAAACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR TCA 90 bp | TATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCTCAGACATCGTCCTGCTCTATaGAGACCCTGGACAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: YQGEQSRGQMLLCYPGLRHRPAL*RPWTAT Trigger: AGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATG...TCTGAGCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAAAGTTGGAGATAGAAGTGAGCAAGTTGGAGGGGTCAAGGACACCATGAGATCTGCCACGGGCAGGTaGGGGGACAGGATCATGAAC | + |
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Preference number: 2 (lower is better) Translates to: GKVGDRSEQVGGVKDTMRSATGR*GDRIMN Trigger: GTTCATGATCCTGTCCCCTCACCTGCCCGTGGCAGA...TCTCATGGTGTCCTTGACCCCTCCAACTTGCTCACTTCTATCTCCAACTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTTTCCTCCTCAGAAGCTTCGGAGCTGTCATAATCTACCAGACTCTGCGGTGCTCAGGGAGGCTTTaGCAGCCTCCAGCATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: CGFLLRSFGAVIIYQTLRCSGRL*QPPACH Trigger: ATGACATGCTGGAGGCTGCCAAAGCCTCCCTGAGCA...CCGCAGAGTCTGGTAGATTATGACAGCTCCGAAGCTTCTGAGGAGGAAACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCCTCCTCAGAAGCTTCGGAGCTGTCATAATCTACCAGACTCTGCGGTGTTGCTCAGGGAGGCTTTaGCAGCCTCCAGCATGTCAT | + |
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Preference number: 2 (lower is better) Translates to: GFLLRSFGAVIIYQTLRCCSGRL*QPPACH Trigger: ATGACATGCTGGAGGCTGCCAAAGCCTCCCTGAGCA...ACACCGCAGAGTCTGGTAGATTATGACAGCTCCGAAGCTTCTGAGGAGGAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR TCA 90 bp | GATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACACCTGTGTGTCAGCTAAAGTaGGCATGTCACTGTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: DAAVLPRAQTLTHLASTPVCQLK*ACHCPE Trigger: TTCTGGACAGTGACATGCTCACTTTAGCTGACACAC...AGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAAGGCTTTCCAGAAACAGCCAGTGCCTTCCACAACCCCACATGTACAGCGTTTCAGGTGGATTCTaGAGGCTACGAGAAGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: AGRLSRNSQCLPQPHMYSVSGGF*RLREAQ Trigger: TTGAGCTTCTCGTAGCCTCCAGAATCCACCTGAAAC...GCTGTACATGTGGGGTTGTGGAAGGCACTGGCTGTTTCTGGAAAGCCTTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| 3UTR-3UTR CCA 90 bp | TATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCTCAGAATCATGACCTGGCTCTaGGATTCGGAGGAGGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: YQGEQSRGQMLLCYPGLRIMTWL*DSEEAS Trigger: TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGAT...TCTGAGCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTCCTCCTCAGAAGCTTCGGAGCTGTCATAATCTACCAGACTCTGCGGTGTCTCTGGCTCCTGAAGTaGAGTTTCAGGTGGATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GFLLRSFGAVIIYQTLRCLWLLK*SFRWIL Trigger: CAGAATCCACCTGAAACTGCACTTCAGGAGCCAGAG...ACACCGCAGAGTCTGGTAGATTATGACAGCTCCGAAGCTTCTGAGGAGGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR GCA 90 bp | TATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCTCAGACTCTGGCTCCTGAAGTaGAGTTTCAGGTGGATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: YQGEQSRGQMLLCYPGLRLWLLK*SFRWIL Trigger: CAGAATCCACCTGAAACTGCACTTCAGGAGCCAGAG...TCTGAGCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCCAGTCTTTCTTCCAGAAACAGCCAGTaGCTTCCACAACCCCACATG | + |
|
Preference number: 2 (lower is better) Translates to: IPLQQRTCRWTESGPSLSSRNSQ*LPQPHM Trigger: CATGTGGGGTTGTGGAAGGCACTGGCTGTTTCTGGA...AGAAAGACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR GCA 90 bp | GATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACACCTTTGCTGTTTGCTAAATaGTCACTTGTGGTTTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: DAAVLPRAQTLTHLASTPLLFAK*SLVVSS Trigger: GGAGGAAACCACAAGTGAGCATTTAGCAAACAGCAA...AGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTAAGTGCAGTTTCAGGTaGATTCTGGAGGCTACGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KAEDRCCCVTQGSDVNTLKCSFR*ILEATR Trigger: TCTCGTAGCCTCCAGAATCCACCTGAAACTGCACTT...AAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGCAGATGGACAGAAAGTGGGCCCAGTCTTTCTGCAGCAGTTTTAAATATTTACAGAAGGTGATCTGGTaGCATCAGGGAGGGCGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LQMDRKWAQSFCSSFKYLQKVIW*HQGGRR Trigger: CCTGCGCCCTCCCTGATGTCACCAGATCACCTTCTG...TAAATATTTAAAACTGCTGCAGAAAGACTGGGCCCACTTTCTGTCCATCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACAAATAAGAAAACACAGTaGGGGTTACAGCCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: TDAAVLPRAQTLTHLASTNKKTQ*GLQPCP Trigger: TGGACATGGCTGTAACCCTCACTGTGTTTTCTTATT...TGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCCAGTCTTTCTGTTTCAGGTGGATTCTaGAGGCTACGAGAAGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: IPLQQRTCRWTESGPSLSVSGGF*RLREAQ Trigger: TTGAGCTTCTCGTAGCCTCCAGAATCCACCTGAAAC...AGAAAGACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGAGTTTCCTTGGGCATCATGACCTGGCTCTGGGATTCGGAGGAGGCATCAAGAATATCTAGAGCATaGGGTTTCAAAAATAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: GRVSLGIMTWLWDSEEASRISRA*GFKNSI Trigger: GATGCTATTTTTGAAACCCCATGCTCTAGATATTCT...TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAGCATTCCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGCATGTCATCGTCCTaGTCTATGAAGACCCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: QAFHIVIPLQQRTCRWTESMSSS*SMKTLD Trigger: GTCCAGGGTCTTCATAGAGCAGGACGATGACATGCT...TTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGGAATGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCCTCAGAAGCTTCGGAGCTGTCATAATCTACCAGACTCTGCGGTGTCCGTGGGCCCAGTCTTTCTaGAGCAGTTTTAAATATTTA | + |
|
Preference number: 2 (lower is better) Translates to: FLLRSFGAVIIYQTLRCPWAQSF*SSFKYL Trigger: TAAATATTTAAAACTGCTGCAGAAAGACTGGGCCCA...CGGACACCGCAGAGTCTGGTAGATTATGACAGCTCCGAAGCTTCTGAGGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAGGCCAGTAGCTCGGACATGAACGTCTGCAAGGCAACTTTCATCTCAGCTAAAAATAGCATCCTCTaGCTCCTGAAGTGCAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KKASSSDMNVCKATFISAKNSIL*LLKCSF Trigger: GAAACTGCACTTCAGGAGCCAGAGGATGCTATTTTT...AGCTGAGATGAAAGTTGCCTTGCAGACGTTCATGTCCGAGCTACTGGCCTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCAAAAATAGCATCCTCTaGCTCCTGAAGTGCAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PHCDSTAAKNLQMDRKWAKNSIL*LLKCSF Trigger: GAAACTGCACTTCAGGAGCCAGAGGATGCTATTTTT...GGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CAA 90 bp | TGCAAGGCAACTTTCATCTCAGCTGCTGAGGTGCAATTCTGGGACTaGATTTCTAAGGACTTCACTGTAATTAAGCTTGCTGCTCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: CKATFISAAEVQFWD*ISKDFTVIKLAALR Trigger: CCTGAGAGCAGCAAGCTTAATTACAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGCAGCTGAGATGAAAGTTGCCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CAA 90 bp | GGATCTCCTCAGACCTTTCTTGACATAAAGATGTCTGTTTGCTGTTaGCTAAATGCTCACTTGTGGTTTCCTCCTCAGAAGCTTCGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: GSPQTFLDIKMSVCC*LNAHLWFPPQKLRS Trigger: GCTCCGAAGCTTCTGAGGAGGAAACCACAAGTGAGCATTTAGCAAACAGCAAACAGACATCTTTATGTCAAGAAAGGTCTGAGGAGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCCAGTCTTCCTTTTTATAAAAGCTaGAATAGGCCAGGCAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VIPLQQRTCRWTESGPSLPFYKS*NRPGKN Trigger: ATTCTTGCCTGGCCTATTCCAGCTTTTATAAAAAGG...AAGACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAAGTTGGAGATAGAAGTGAGCAAGTTGGAGGGGTCAAGGACACCATGAGAGTAAGTGAATCTAGGTaGATGTATGTAGGCTGTATG | + |
|
Preference number: 2 (lower is better) Translates to: GKVGDRSEQVGGVKDTMRVSESR*MYVGCM Trigger: CATACAGCCTACATACATCCACCTAGATTCACTTAC...TCTCATGGTGTCCTTGACCCCTCCAACTTGCTCACTTCTATCTCCAACTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTACTCCAGCTGGAAAGCTATGCTCAAAACAGAAGAGAAAATAACCATGGTAGCATGTCATCGTCCTaGTCTATGAAGACCCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: MLLQLESYAQNRRENNHGSMSSS*SMKTLD Trigger: GTCCAGGGTCTTCATAGAGCAGGACGATGACATGCT...ACCATGGTTATTTTCTCTTCTGTTTTGAGCATAGCTTTCCAGCTGGAGTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCCGCTGGGTTATATGGAAAGAGATTTTTCTCCTGCAAACGGTAAATTGCTCCCTAAATGCTCACTTGTaGTTTCCTCCTCAGAAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: CRWVIWKEIFLLQTVNCSLNAHL*FPPQKL Trigger: AAGCTTCTGAGGAGGAAACCACAAGTGAGCATTTAG...GGAGCAATTTACCGTTTGCAGGAGAAAAATCTCTTTCCATATAACCCAGCGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | GACGAGTATAACCAACTTCCTTTTTATAAAAGCTGGAATAGGCCAGGCAAGAATGTTTCAGGTGGATTCTaGAGGCTACGAGAAGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: DEYNQLPFYKSWNRPGKNVSGGF*RLREAQ Trigger: TTGAGCTTCTCGTAGCCTCCAGAATCCACCTGAAAC...ATTCTTGCCTGGCCTATTCCAGCTTTTATAAAAAGGAAGTTGGTTATACTCGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTACTCCAGCTGGAAAGCTATGCTCAAAACAGAAGAGAAAATAACCATGGTAAGTGCAGTTTCAGGTaGATTCTGGAGGCTACGAGA | + |
|
Preference number: 2 (lower is better) Translates to: MLLQLESYAQNRRENNHGKCSFR*ILEATR Trigger: TCTCGTAGCCTCCAGAATCCACCTGAAACTGCACTT...ACCATGGTTATTTTCTCTTCTGTTTTGAGCATAGCTTTCCAGCTGGAGTAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAGCATTCCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAATGGGCCCAGTCTTTCTaGAGCAGTTTTAAATATTTA | + |
|
Preference number: 2 (lower is better) Translates to: QAFHIVIPLQQRTCRWTEWAQSF*SSFKYL Trigger: TAAATATTTAAAACTGCTGCAGAAAGACTGGGCCCA...TTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGGAATGCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCATTCCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAACCTTTTTATAAAAGCTaGAATAGGCCAGGCAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: QAFHIVIPLQQRTCRWTEPFYKS*NRPGKN Trigger: ATTCTTGCCTGGCCTATTCCAGCTTTTATAAAAAGG...TTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGGAATGCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCCGCTGGGTTATATGGAAAGAGATTTTTCTCCTGCAAACGGTAAATTGCTCCATAAAGATGTCTGTTTaGTGTTTGCTAAATGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: CRWVIWKEIFLLQTVNCSIKMSV*CLLNAH Trigger: GTGAGCATTTAGCAAACAGCAAACAGACATCTTTAT...GGAGCAATTTACCGTTTGCAGGAGAAAAATCTCTTTCCATATAACCCAGCGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | AGCCCAGGGGAGCCAGGGGCAAGTGTTCTCTCCAACTaGAGAAGCCGGAGCATGAGGCACTGTGAGGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPGEPGASVLSN*RSRSMRHCEAG Trigger: ACCAGCCTCACAGTGCCTCATGCTCCGGCTTCTCCAGTTGGAGAGAACACTTGCCCCTGGCTCCCCTGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | CTGCGGTGTCCGGGAAGGTGGGCCATTAGCTGGCACTaGGAGAGTTTCCTTGGGCATCATGACCTGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRCPGRWAISWH*ESFLGHHDLAL Trigger: CAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCCAGTGCCAGCTAATGGCCCACCTTCCCGGACACCGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACACCTAGCCACTCGCATGGGTaGTGTGGCTGTAGAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: DAAVLPRAQTLTHLASTPSHSHG*CGCREG Trigger: GCCCTCTCTACAGCCACACAACCCATGCGAGTGGCT...AGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR TCA 72 bp | CTTTGGCAGCCTCCAGCATGTCATCGTCCTGCTCTATaGAGACCCTGGACAGCCACTCGCATGGGTTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LWQPPACHRPAL*RPWTATRMGCV Trigger: CACACAACCCATGCGAGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATGACATGCTGGAGGCTGCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | TCTGCAGAGAGCAAAGGCTCCAGGCTATGTTCCTTTTaGTCCTCCCATGTCCTAGGCAGGCCCTGGATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SAESKGSRLCSF*SSHVLGRPWIS Trigger: GGAGATCCAGGGCCTGCCTAGGACATGGGAGGAGCAAAAGGAACATAGCCTGGAGCCTTTGCTCTCTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | GTCATAATCTACCAGACTCTGCGGTGTCCGGGAAGGTaGGCCATTAGCTGGCACTGGGAGAGTTTCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VIIYQTLRCPGR*AISWHWESFLG Trigger: CCCAAGGAAACTCTCCCAGTGCCAGCTAATGGCCCACCTTCCCGGACACCGCAGAGTCTGGTAGATTATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CAA 90 bp | AACCTGGGACCATGGATGTTATGGAGCCTGGGCCACAACCAGGGAGCTTTCAGAACTGGGAGAGTTTCCTaGGGCATCATGACCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NLGPWMLWSLGHNQGAFRTGRVS*GIMTWL Trigger: GAGCCAGGTCATGATGCCCAAGGAAACTCTCCCAGT...TCTGAAAGCTCCCTGGTTGTGGCCCAGGCTCCATAACATCCATGGTCCCAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR TCA 72 bp | GGGGAAGCTGAGGCAAGAGGGCTGCACACAGGAGTTTaGGAACAAGCCAACGGCAAAGAGAAAGGAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GEAEARGLHTGV*EQANGKEKGSR Trigger: CCTGCTTCCTTTCTCTTTGCCGTTGGCTTGTTCTCAAACTCCTGTGTGCAGCCCTCTTGCCTCAGCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR TCA 72 bp | GGGTCACTAGTGATTAGCTGGGCCTGGGACAGGAGATaGTACTGGGAGTCTATGGGGGTGACCCTAACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSLVISWAWDRR*YWESMGVTLTE Trigger: CTCAGTTAGGGTCACCCCCATAGACTCCCAGTATCATCTCCTGTCCCAGGCCCAGCTAATCACTAGTGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | TTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTaGTCAGCTGGAGGTAGATGCTCAGGGAGGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLGSDLPKHPTL*SAGGRCSGRLW Trigger: CCAAAGCCTCCCTGAGCATCTACCTCCAGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133199.3 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | AGTCAACTAACCTGGGACCATGGATGTTATGGAGCCTaGGCCACAACCAGGGAGCTTTCAGAGGCTGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: SQLTWDHGCYGA*ATTRELSEAGP Trigger: AGGTCCAGCCTCTGAAAGCTCCCTGGTTGTGGCCCAGGCTCCATAACATCCATGGTCCCAGGTTAGTTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | GACCTACAGTCAACTAACCTGGGACCATGGATGTTATaGAGCCTGGGCCACAACCAGGGAGCTTTCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: DLQSTNLGPWML*SLGHNQGAFRG Trigger: GCCTCTGAAAGCTCCCTGGTTGTGGCCCAGGCTCCATAACATCCATGGTCCCAGGTTAGTTGACTGTAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR TCA 72 bp | GTGCTTCTGCCACGGGCAGGTGAGGGGACAGGATCATaGACAAGCATTCCACATTGTGATTCCACTGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLLPRAGEGTGS*TSIPHCDSTAA Trigger: TGCTGCAGTGGAATCACAATGTGGAATGCTTGTTCATGATCCTGTCCCCTCACCTGCCCGTGGCAGAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR TCA 72 bp | GGCATTACAGACAGTAGTGAGCTGCCAAGGGGAAGCTaGGGCAAGAGGGCTGCACACAGGAGTTTGAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: GITDSSELPRGS*GKRAAHRSLRT Trigger: TGTTCTCAAACTCCTGTGTGCAGCCCTCTTGCCTCAGCTTCCCCTTGGCAGCTCACTACTGTCTGTAATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAGTTTCCTTGGGCATCATGACCTGGCTCTGGGATTCGGAGGAGGCATCAACTGCAGCAAAGAACTaGCAGATGGACAGAAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GRVSLGIMTWLWDSEEASTAAKN*QMDRKW Trigger: CCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGT...TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | AGGGTTACAGCCATGTCCATGTGTGGAGCGGATCCATaGTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: RVTAMSMCGADP*FLFLGQTCRSI Trigger: GATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATCCGCTCCACACATGGACATGGCTGTAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | ACGAAGAAACAATCCCACTTGCCAGACAGTCCCGTCTaGAGCAACTCTACCCTTGGCAGAGAAGGGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: TKKQSHLPDSPV*SNSTLGREGRT Trigger: AGTTCTCCCTTCTCTGCCAAGGGTAGAGTTGCTGCAGACGGGACTGTCTGGCAAGTGGGATTGTTTCTTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | GCAAAGAGAAAGGAAGCAGGAACGGCTACCAAGCCCTaGAGTCCAAAGCTTTCCTCAACATTGCAAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AKRKEAGTATKP*SPKLSSTLQGL Trigger: CAGGCCTTGCAATGTTGAGGAAAGCTTTGGACTGCAGGGCTTGGTAGCCGTTCCTGCTTCCTTTCTCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAGTTTCCTTGGGCATCATGACCTGGCTCTGGGATTCGGAGGAGGCATCAGTGCAATTCTGGGACTaGATTTCTAAGGACTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: GRVSLGIMTWLWDSEEASVQFWD*ISKDFT Trigger: AGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCAC...TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | AACTCTACCCTTGGCAGAGAAGGGAGAACTGGACTCTaGAGAGAGCAAAGGCTCCAGGCTATGTTCCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: NSTLGREGRTGL*REQRLQAMFLL Trigger: CAAAAGGAACATAGCCTGGAGCCTTTGCTCTCTGCAGAGTCCAGTTCTCCCTTCTCTGCCAAGGGTAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | GTAAATCTCACTCAGAAGGGGGAAATAGATAGCCACTaGAGGTGGATGAAGAGAGAAGACGGCGTGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VNLTQKGEIDSH*RWMKREDGVRR Trigger: CCTCCTCACGCCGTCTTCTCTCTTCATCCACCTCCAGTGGCTATCTATTTCCCCCTTCTGAGTGAGATTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACACCTCAGAGAAGGCACTTTTaGACGAGTATAACCAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: DAAVLPRAQTLTHLASTPQRRHF*TSITNF Trigger: GAAGTTGGTTATACTCGTCAAAAAGTGCCTTCTCTG...AGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR TCA 72 bp | CCACATGTACAGCGTGCAGAAGTGTGTCAGCTAAAGTaGGCATGTCACTGTCCAGAAGGTGATCTGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PHVQRAEVCQLK*ACHCPEGDLVT Trigger: TGTCACCAGATCACCTTCTGGACAGTGACATGCTCACTTTAGCTGACACACTTCTGCACGCTGTACATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR TCA 72 bp | ATAGAAGTGAGCAAGTTGGAGGGGTCAAGGACACCATaGGACCTACAGTCAACTAACCTGGGACCATGGATG | + |
|
Preference number: 3 (lower is better) Translates to: IEVSKLEGSRTP*DLQSTNLGPWM Trigger: CATCCATGGTCCCAGGTTAGTTGACTGTAGGTCTCATGGTGTCCTTGACCCCTCCAACTTGCTCACTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR GCA 72 bp | ACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATaGTGCTGTGTTACCCAGGGCTCAGACGTTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: TLSIKENKAEDR*CCVTQGSDVNT Trigger: TGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | AAACGATGCAGAGCGTGCAGAGATGGAGATGCATCATaGATAAGATGTGCAGCGTCCCAGGACATTACACTG | + |
|
Preference number: 3 (lower is better) Translates to: KRCRACRDGDAS*IRCAASQDITL Trigger: CAGTGTAATGTCCTGGGACGCTGCACATCTTATCCATGATGCATCTCCATCTCTGCACGCTCTGCATCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | TTTCTTACTGGTTTCCCTTCCTCTAACTGGACTGCCTaGTTAGGTCTCAGTGAGAGGTTGTGCCTAGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLTGFPSSNWTA*LGLSERLCLVL Trigger: CAGGACTAGGCACAACCTCTCACTGAGACCTAACCAGGCAGTCCAGTTAGAGGAAGGGAAACCAGTAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | TGTCTCCTCTTTCTTACTGGTTTCCCTTCCTCTAACTaGACTGCCTGGTTAGGTCTCAGTGAGAGGTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CLLFLTGFPSSN*TAWLGLSERLC Trigger: GCACAACCTCTCACTGAGACCTAACCAGGCAGTCCAGTTAGAGGAAGGGAAACCAGTAAGAAAGAGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGACCAGTCCTGAGTCTGCATCCAGGTTGAACTTCATCCCCTCCAAAGCAGGACAGAGAAGGCACTTTTaGACGAGTATAACCAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: RTSPESASRLNFIPSKAGQRRHF*TSITNF Trigger: GAAGTTGGTTATACTCGTCAAAAAGTGCCTTCTCTG...TCCTGCTTTGGAGGGGATGAAGTTCAACCTGGATGCAGACTCAGGACTGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | GCATTCCACATTGTGATTCCACTGCAGCAAAGAACTTaGAGATGGACAGAAAGTGGGCCCAGTCTTTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AFHIVIPLQQRT*RWTESGPSLSA Trigger: TGCAGAAAGACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGGAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTaGTGTGTTACCCAGGGCTCAGACGTTAACACACTT | + |
|
Preference number: 3 (lower is better) Translates to: LSIKENKAEDRC*CVTQGSDVNTL Trigger: AAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | AGCGTGCAGAGATGGAGATGCATCATGGATAAGATGTaGAGCGTCCCAGGACATTACACTGCACATCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SVQRWRCIMDKM*SVPGHYTAHLD Trigger: ATCAAGATGTGCAGTGTAATGTCCTGGGACGCTGCACATCTTATCCATGATGCATCTCCATCTCTGCACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | CACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATaGACAGAAAGTGGGCCCAGTCTTTCTGCAGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HIVIPLQQRTCR*TESGPSLSAAV Trigger: AACTGCTGCAGAAAGACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | AGACAGGGTTTCTTCCTCAACTTGAAACTGGATCTTTaGACAAGGAGGAGTAGTGGATGTCTCCGATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQGFFLNLKLDL*TRRSSGCLRSG Trigger: CCCTGATCGGAGACATCCACTACTCCTCCTTGTCCAAAGATCCAGTTTCAAGTTGAGGAAGAAACCCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | ATGCAGAGACCCATAGCCAATCACCAGGCAGAGATCTaGGACTCTTGTGGAAAAGTTGGAGATAGAAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: MQRPIANHQAEI*DSCGKVGDRSE Trigger: CTCACTTCTATCTCCAACTTTTCCACAAGAGTCCCAGATCTCTGCCTGGTGATTGGCTATGGGTCTCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCCAGTCTTTCTGCAGCAGAGAAGGCACTTTTaGACGAGTATAACCAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: HCSKELADGQKVGPVFLQQRRHF*TSITNF Trigger: GAAGTTGGTTATACTCGTCAAAAAGTGCCTTCTCTG...CTGCAGAAAGACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCATTCCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAACCATGCTTCCTTTTCTaGGGTCAGACTTGCCGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QAFHIVIPLQQRTCRWTEPCFLF*GQTCRS Trigger: GCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGG...TTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGGAATGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGCTGGGTTATATGGAAAGAGATTTTTCTCCTGCAAACGGTAAATTGCTCCAAGAAACAATCCCACTaGCCAGACAGTCCCGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CRWVIWKEIFLLQTVNCSKKQSH*PDSPVC Trigger: GCAGACGGGACTGTCTGGCAAGTGGGATTGTTTCTT...GGAGCAATTTACCGTTTGCAGGAGAAAAATCTCTTTCCATATAACCCAGCGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR TCA 72 bp | TTTGAGGCAAATGGATGGAACTTGAGAATATCATCCTaGGTGAGGTACCCCGGAGCCAGCAAGACAGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: FEANGWNLRISS*VRYPGASKTDD Trigger: ATCATCTGTCTTGCTGGCTCCGGGGTACCTCACTCAGGATGATATTCTCAAGTTCCATCCATTTGCCTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR GCA 72 bp | ACCTGTCATGGGATGGTCCTTTCTCAAACACTACTATaGTCCATAAGGCAAAGACCCAGACACGCATGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TCHGMVLSQTLL*SIRQRPRHACL Trigger: CAAACATGCGTGTCTGGGTCTTTGCCTTATGGAGCATAGTAGTGTTTGAGAAAGGACCATCCCATGACAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR GCA 72 bp | AGTCGTCAACACAAAATCTGTCCTGCTTACAAGACGTaGAGGGATAAAGATGGAGGAGAGACAGAGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SRQHKICPAYKT*RDKDGGETEGT Trigger: TGTTCCCTCTGTCTCTCCTCCATCTTTATCCCTGCACGTCTTGTAAGCAGGACAGATTTTGTGTTGACGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | GGCCTCCACACCTTTCAACAACTTCAGAAGTGCCGCTaGGTTATATGGAAAGAGATTTTTCTCCTGCAAACG | + |
|
Preference number: 3 (lower is better) Translates to: GLHTFQQLQKCR*VIWKEIFLLQT Trigger: CGTTTGCAGGAGAAAAATCTCTTTCCATATAACCCAGCGGCACTTCTGAAGTTGTTGAAAGGTGTGGAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | ATGGGAAAGAGTCAACCCCTAACACTATTAATATCCTaGTATGCTTGCAGACAGGAACCTAGCACGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: MGKSQPLTLLIS*YACRQEPSTTV Trigger: GACAGTCGTGCTAGGTTCCTGTCTGCAAGCATAGCAGGATATTAATAGTGTTAGGGGTTGACTCTTTCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR GCA 72 bp | AGAGAAAATAACCATGGTAGCAAACGATGCAGAGCGTaGAGAGATGGAGATGCATCATGGATAAGATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RENNHGSKRCRA*RDGDASWIRCA Trigger: TGCACATCTTATCCATGATGCATCTCCATCTCTGCACGCTCTGCATCGTTTGCTACCATGGTTATTTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR TCA 72 bp | AATGCTACATTCTTCAAGAAGAATAAGAAAACACAGTaGGGGTTACAGCCATGTCCATGTGTGGAGCGGATC | + |
|
Preference number: 3 (lower is better) Translates to: NATFFKKNKKTQ*GLQPCPCVERI Trigger: GATCCGCTCCACACATGGACATGGCTGTAACCCTCACTGTGTTTTCTTATTCTTCTTGAAGAATGTAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR GCA 72 bp | TTTCATGATAGGGGTAGCGATGGGTCCTGGAAGCCATaGCTCTGGATACCAAAAGGTAATTATATATATAAG | + |
|
Preference number: 3 (lower is better) Translates to: FHDRGSDGSWKP*LWIPKGNYIYK Trigger: CTTATATATATAATTACCTTTTGGTATCCAGAGGCATGGCTTCCAGGACCCATCGCTACCCCTATCATGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | AAGGCAACTTTCATCTCAGCTGCTGAGGTGCAATTCTaGGACTTGATTTCTAAGGACTTCACTGTAATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KATFISAAEVQF*DLISKDFTVIK Trigger: CTTAATTACAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGCAGCTGAGATGAAAGTTGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | ACCTTTCAACAACTTCAGAAGTGCCGCTGGGTTATATaGAAAGAGATTTTTCTCCTGCAAACGGTAAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: TFQQLQKCRWVI*KEIFLLQTVNC Trigger: GCAATTTACCGTTTGCAGGAGAAAAATCTCTTTCCATATAACCCAGCGGCACTTCTGAAGTTGTTGAAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CCA 72 bp | GGCCTCTTGAGCTCAGAAGATAAATCTTACTTAGTTTaGGCTACAGAATATGCAGTCATTTGTCATGGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLLSSEDKSYLV*ATEYAVICHGE Trigger: TTCGCCATGACAAATGACTGCATATTCTGTAGCCCAAACTAAGTAAGATTTATCTTCTGAGCTCAAGAGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR GCA 72 bp | TATATAAGTACACGAGGATGTAAATGTCTCTGCTCCTaGCCAATACTTTTCTTAAACAAATGGAAGCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YISTRGCKCLCS*PILFLNKWKPS Trigger: ACTGGGCTTCCATTTGTTTAAGAAAAGTATTGGGCAGGAGCAGAGACATTTACATCCTCGTGTACTTATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR CCA 72 bp | CAAATCAAAGCTACAACGAGACAATGTTACTCCAGCTaGAAAGCTATGCTCAAAACAGAAGAGAAAATAACC | + |
|
Preference number: 3 (lower is better) Translates to: QIKATTRQCYSS*KAMLKTEEKIT Trigger: GGTTATTTTCTCTTCTGTTTTGAGCATAGCTTTCCAGCTGGAGTAACATTGTCTCGTTGTAGCTTTGATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| 3UTR GCA 72 bp | CATTCTTCTTTACAGGTCTGTAATATTCCAATGAAATaGCTAGTCTTGTCTTTTACAACGTACAATCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: HSSLQVCNIPMK*LVLSFTTYNPS Trigger: ACTAGGATTGTACGTTGTAAAAGACAAGACTAGGCATTTCATTGGAATATTACAGACCTGTAAAGAAGAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTCTGGTCAGCTGGAGGTAGATGCTCAGGGAGGCTTTGGCAGCCTCCAGCACAGAAGGTGATCTGGTaGCATCAGGGAGGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLWSAGGRCSGRLWQPPAQKVIW*HQGGRR Trigger: CCTGCGCCCTCCCTGATGTCACCAGATCACCTTCTG...TGCTGGAGGCTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGACCAGAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR TCA 90 bp | CATCCCACTCTCTGGTCAGCTGGAGGTAGATGCTCAGGGAGGCTTTGGCAGCCTGCATCCTCTGGCTCCTaGAGTGCAGTTTCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPTLWSAGGRCSGRLWQPASSGS*SAVSGG Trigger: TCCACCTGAAACTGCACTTCAGGAGCCAGAGGATGC...AGGCTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGACCAGAGAGTGGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCACTCTCTGGTCAGCTGGAGGTAGATGCTCAGGGAGGCTTTGGCAGCCTCCATCGTCCTGCTCTATaGAGACCCTGGACAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IPLSGQLEVDAQGGFGSLHRPAL*RPWTAT Trigger: AGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATG...GAGGCTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGACCAGAGAGTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGAAGGCTTTCCAGAAACAGCCAGTGCCTTCCACAACCCCACATGTACAGCGAGGATGGCCCATGCTaGCCTGCCATGCCATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRLSRNSQCLPQPHMYSEDGPC*PAMPSS Trigger: GCTTGATGGCATGGCAGGCCAGCATGGGCCATCCTC...GCTGTACATGTGGGGTTGTGGAAGGCACTGGCTGTTTCTGGAAAGCCTTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CAA 72 bp | GAAGGTGGGCCATTAGCTGGCACTGGGAGAGTTTCCTaGGGCATCATGACCTGGCTCTGGGATTCGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGGPLAGTGRVS*GIMTWLWDSEE Trigger: CTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCCAGTGCCAGCTAATGGCCCACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | ACTCTCTGGTCAGCTGGAGGTAGATGCTCAGGGAGGCTTTGGCAGCCTCCAGCAGATCAGGACCAGTCCTaGGTCTGCATCCAGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLWSAGGRCSGRLWQPPADQDQS*VCIQVE Trigger: TTCAACCTGGATGCAGACTCAGGACTGGTCCTGATC...TGCTGGAGGCTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGACCAGAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR GCA 90 bp | GGATCCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTGGGAGGATGGCCCATaGTGGCCTGCCATGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSMLPFLGSDLPKHPTLWWEDGP*WPAMPS Trigger: TGATGGCATGGCAGGCCAGCATGGGCCATCCTCCCA...CCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCCAGAAGGTGATCTGGTaGCATCAGGGAGGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGQKVIW*HQGGRR Trigger: CCTGCGCCCTCCCTGATGTCACCAGATCACCTTCTG...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGTCTGCCACGGGCAGGTaGGGGGACAGGATCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFYQGEQSRGQMLLCYPGSATGR*GDRIMN Trigger: GTTCATGATCCTGTCCCCTCACCTGCCCGTGGCAGA...CCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCGAGCATGAGGCACTGTaGGGCTGGTGCTTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGEHEAL*GWCFCH Trigger: GTGGCAGAAGCACCAGCCTCACAGTGCCTCATGCTC...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | CGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGTGGGAGGATGGCCCATaGTGGCCTGCCATGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RFLSRRTKPRTDAAVLPRWEDGP*WPAMPS Trigger: TGATGGCATGGCAGGCCAGCATGGGCCATCCTCCCA...CCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | GATCCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTGAGGATGGCCCATGCTaGCCTGCCATGCCATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPCFLFLGQTCRSIPLSGEDGPC*PAMPSS Trigger: GCTTGATGGCATGGCAGGCCAGCATGGGCCATCCTC...ACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | AGGACCAGTCCTGAGTCTGCATCCAGGTTGAACTTCATCCCCTCCAAAGCAGGACCACTGGCATTAGACTaGGCTACAGGGAAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTSPESASRLNFIPSKAGPLALD*ATGKAG Trigger: TCCAGCCTTCCCTGTAGCTCAGTCTAATGCCAGTGG...TCCTGCTTTGGAGGGGATGAAGTTCAACCTGGATGCAGACTCAGGACTGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | AGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCTCTGCCACGGGCAGGTaGGGGGACAGGATCATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRFLSRRTKPRTDAAVLPSATGR*GDRIMN Trigger: GTTCATGATCCTGTCCCCTCACCTGCCCGTGGCAGA...GGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | ACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGAGCATGAGGCACTGTaGGGCTGGTGCTTCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLSIKENKAEDRCCCVTQEHEAL*GWCFCH Trigger: GTGGCAGAAGCACCAGCCTCACAGTGCCTCATGCTC...CTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGGGAGAAGCCGGAGCATaGGGCACTGTGAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGRRFLSRRTKPRTDAAVGEAGA*GTVRLV Trigger: CACCAGCCTCACAGTGCCTCATGCTCCGGCTTCTCC...CACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCATGGGAGGATGGCCCATaGTGGCCTGCCATGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPWEDGP*WPAMPS Trigger: TGATGGCATGGCAGGCCAGCATGGGCCATCCTCCCA...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | CCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCTGGGAGGATGGCCCATaGTGGCCTGCCATGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PHCDSTAAKNLQMDRKWAWEDGP*WPAMPS Trigger: TGATGGCATGGCAGGCCAGCATGGGCCATCCTCCCA...GGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGAGGATGGCCCATGCTaGCCTGCCATGCCATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPEDGPC*PAMPSS Trigger: GCTTGATGGCATGGCAGGCCAGCATGGGCCATCCTC...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | GATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACACCTTCTGAAGCTGTCTCTTaGGACACTCCTGTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DAAVLPRAQTLTHLASTPSEAVS*DTPVLQ Trigger: CTGGAGCACAGGAGTGTCCCAAGAGACAGCTTCAGA...AGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTGGTCAGCTGGAGGTAGATGCTCAGGGAGGCTTTGGCAGCCTCCAGCATTCTTCTCTCTCAGCTaGAAATACAGTAGCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLWSAGGRCSGRLWQPPAFFSLS*KYSSEA Trigger: CGCCTCGCTACTGTATTTCCAGCTGAGAGAGAAGAA...TGCTGGAGGCTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGACCAGAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CAA 72 bp | CACGTGATCAGGACCAGTCCTGAGTCTGCATCCAGGTaGAACTTCATCCCCTCCAAAGCAGGAAGGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVIRTSPESASR*NFIPSKAGRLS Trigger: GGAAAGCCTTCCTGCTTTGGAGGGGATGAAGTTCAACCTGGATGCAGACTCAGGACTGGTCCTGATCACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GATCCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCCACTGGCATTAGACTaGGCTACAGGGAAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DPCFLFLGQTCRSIPLSGPLALD*ATGKAG Trigger: TCCAGCCTTCCCTGTAGCTCAGTCTAATGCCAGTGG...ACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GGGAGAGTTTCCTTGGGCATCATGACCTGGCTCTGGGATTCGGAGGAGGCATCATCAATCACTGTTAACTaGAGGAGCTTCATCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVSLGIMTWLWDSEEASSITVN*RSFISR Trigger: CCGGGAGATGAAGCTCCTTCAGTTAACAGTGATTGA...TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGATGCCCAAGGAAACTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGGCATCCTCTGGCTCCTaGAGTGCAGTTTCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFYQGEQSRGQMLLCYPGASSGS*SAVSGG Trigger: TCCACCTGAAACTGCACTTCAGGAGCCAGAGGATGC...CCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCGCATCCTCTGGCTCCTaGAGTGCAGTTTCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGASSGS*SAVSGG Trigger: TCCACCTGAAACTGCACTTCAGGAGCCAGAGGATGC...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCAGAAGGTGATCTGGTaGCATCAGGGAGGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYQKVIW*HQGGRR Trigger: CCTGCGCCCTCCCTGATGTCACCAGATCACCTTCTG...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAGCAACTCTACCCTTGGCAGAGAAGGGAGAACTGGACTCTGCAGAGAGTCCGAGAGATGCTTCTaGCAGAAAGTGACCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCSNSTLGREGRTGLCRESERCF*QKVTQE Trigger: TTCCTGGGTCACTTTCTGCCAGAAGCATCTCTCGGA...CTCTCTGCAGAGTCCAGTTCTCCCTTCTCTGCCAAGGGTAGAGTTGCTGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | CGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGTGCTCAGGGAGGCTTTaGCAGCCTCCAGCATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFLSRRTKPRTDAAVLPRCSGRL*QPPACH Trigger: ATGACATGCTGGAGGCTGCCAAAGCCTCCCTGAGCA...CCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | CGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGTCCTAGGCAGGCCCTaGATCTCCTCAGACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFLSRRTKPRTDAAVLPRVLGRP*ISSDLS Trigger: AGAAAGGTCTGAGGAGATCCAGGGCCTGCCTAGGAC...CCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| 3UTR CAA 72 bp | ATGTCCATGTGTGGAGCGGATCCATGCTTCCTTTTCTaGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSMCGADPCFLF*GQTCRSIPLSG Trigger: ACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATCCGCTCCACACATGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CAA 72 bp | GCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTaGGCCTCCACACCTTTCAACAACTTCAGAAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAVLPRAQTLTH*ASTPFNNFRSA Trigger: GGCACTTCTGAAGTTGTTGAAAGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | AGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCCCACTGGCATTAGACTaGGCTACAGGGAAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRFLSRRTKPRTDAAVLPPLALD*ATGKAG Trigger: TCCAGCCTTCCCTGTAGCTCAGTCTAATGCCAGTGG...GGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGAGTCTGCATCCAGGTTGAACTTCATCCCCTCCAAAGCAGGAAGGCTTGAGGACTCCGAGAGATaGTTCTGGCAGAAAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SPESASRLNFIPSKAGRLEDSER*FWQKVT Trigger: GGTCACTTTCTGCCAGAAGCATCTCTCGGAGTCCTC...AAGCCTTCCTGCTTTGGAGGGGATGAAGTTCAACCTGGATGCAGACTCAGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | ATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTTCCAGAAACAGCCAGTaGCTTCCACAACCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: MLPFLGSDLPKHPTLWSASRNSQ*LPQPHM Trigger: CATGTGGGGTTGTGGAAGGCACTGGCTGTTTCTGGA...AGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR GCA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCATCAGCTGGAGGTAGATaGTCAGGGAGGCTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPSAGGR*SGRLWQ Trigger: CTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGA...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | CCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGTCCGAGAGATGCTTCTaGCAGAAAGTGACCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCFLFLGQTCRSIPLSGQSERCF*QKVTQE Trigger: TTCCTGGGTCACTTTCTGCCAGAAGCATCTCTCGGA...CTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTGGGTTTCAGGTGGATTCTaGAGGCTACGAGAAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASFSWVRLAEASHSLVSWVSGGF*RLREAQ Trigger: TTGAGCTTCTCGTAGCCTCCAGAATCCACCTGAAAC...CCAGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTGGAAGTGCAGTTTCAGGTaGATTCTGGAGGCTACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASFSWVRLAEASHSLVSWKCSFR*ILEATR Trigger: TCTCGTAGCCTCCAGAATCCACCTGAAACTGCACTT...CCAGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | GCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCAGATGGACAGAAAGTaGGCCCAGTCTTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFYQGEQSRGQMLLCYPGQMDRK*AQSFCS Trigger: GCTGCAGAAAGACTGGGCCCACTTTCTGTCCATCTG...CCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCACTGGCATTAGACTaGGCTACAGGGAAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYPLALD*ATGKAG Trigger: TCCAGCCTTCCCTGTAGCTCAGTCTAATGCCAGTGG...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACACCTGCTTCTGGCAGAAAGTaGCCCAGGAATTACTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: DAAVLPRAQTLTHLASTPASGRK*PRNYLT Trigger: TGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGC...AGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCATCGTCCTGCTCTATaGAGACCCTGGACAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYHRPAL*RPWTAT Trigger: AGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATG...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGCATGTCATCGTCCTGCTCTATGAAGACCCTGGACAGCCACTCGCATGGGCAGAATTCTGGAGCATaGGCATCAATTTGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSMSSSCSMKTLDSHSHGQNSGA*ASIWNR Trigger: TCGATTCCAAATTGATGCGCATGCTCCAGAATTCTG...CCCATGCGAGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATGACATGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | ATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTCTCTGGCTCCTGAAGTaGAGTTTCAGGTGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLPFLGSDLPKHPTLWSALWLLK*SFRWIL Trigger: CAGAATCCACCTGAAACTGCACTTCAGGAGCCAGAG...AGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGAGCATGTCATCGTCCTaGTCTATGAAGACCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AFYQGEQSRGQMLLCYPGSMSSS*SMKTLD Trigger: GTCCAGGGTCTTCATAGAGCAGGACGATGACATGCT...CCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | GGATCCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGAAGTTAGAGGGGCTCTaGAAGTCTCCAAAATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSMLPFLGSDLPKHPTLWKLEGL*KSPKCW Trigger: CCAGCATTTTGGAGACTTCCAGAGCCCCTCTAACTT...CCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACTGCTCAGGGAGGCTTTaGCAGCCTCCAGCATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYCSGRL*QPPACH Trigger: ATGACATGCTGGAGGCTGCCAAAGCCTCCCTGAGCA...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGATCATGACCTGGCTCTaGGATTCGGAGGAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSIKENKAEDRCCCVTQIMTWL*DSEEAS Trigger: TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGAT...CTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTCGGTGTCCGGGAAGGTaGGCCATTAGCTGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDARCPGR*AISWHW Trigger: CCAGTGCCAGCTAATGGCCCACCTTCCCGGACACCG...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTTCAATCACTGTTAACTaGAGGAGCTTCATCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLPFLGSDLPKHPTLWSASITVN*RSFISR Trigger: CCGGGAGATGAAGCTCCTTCAGTTAACAGTGATTGA...AGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTGTGTGTCAGCTAAAGTaGGCATGTCACTGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLPFLGSDLPKHPTLWSAVCQLK*ACHCPE Trigger: TTCTGGACAGTGACATGCTCACTTTAGCTGACACAC...AGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR TCA 90 bp | ACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGTTTTGTGCTGGCTTCTaGCCTTCTCTCTCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLSIKENKAEDRCCCVTQFCAGF*PSLSAG Trigger: TCCAGCTGAGAGAGAAGGTCAGAAGCCAGCACAAAA...CTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTGGTCGAGTTCAACAGACTaGAAAAGGACTTCAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASFSWVRLAEASHSLVSWSSSTD*KRTSVS Trigger: GCTAACTGAAGTCCTTTTGCAGTCTGTTGAACTCGA...CCAGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | ATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCCAGTCTTTCTGAGGACTCCGAGAGATaGTTCTGGCAGAAAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: IPLQQRTCRWTESGPSLSEDSER*FWQKVT Trigger: GGTCACTTTCTGCCAGAAGCATCTCTCGGAGTCCTC...AGAAAGACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACGAGGACTCCGAGAGATaGTTCTGGCAGAAAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYEDSER*FWQKVT Trigger: GGTCACTTTCTGCCAGAAGCATCTCTCGGAGTCCTC...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTGGAAAGGAGTCAAGAGCTaGTTTAGACTTTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASFSWVRLAEASHSLVSWKGVKS*FRLSAL Trigger: GAGAGCAGAAAGTCTAAAGCAGCTCTTGACTCCTTT...CCAGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR GCA 90 bp | ACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGCTCTGGCTCCTGAAGTaGAGTTTCAGGTGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSIKENKAEDRCCCVTQLWLLK*SFRWIL Trigger: CAGAATCCACCTGAAACTGCACTTCAGGAGCCAGAG...CTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCTGCAGCAAAGAACTTaGAGATGGACAGAAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFYQGEQSRGQMLLCYPGLQQRT*RWTESG Trigger: CCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAG...CCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | AGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGCTATGTTCCTTTTaGTCCTCCCATGTCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRFLSRRTKPRTDAAVLPRLCSF*SSHVLG Trigger: GCCTAGGACATGGGAGGAGCAAAAGGAACATAGCCT...GGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | GATCCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTTTCTTCTCTCTCAGCTaGAAATACAGTAGCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DPCFLFLGQTCRSIPLSGFFSLS*KYSSEA Trigger: CGCCTCGCTACTGTATTTCCAGCTGAGAGAGAAGAA...ACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCATCCGAGAGATGCTTCTaGCAGAAAGTGACCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPSERCF*QKVTQE Trigger: TTCCTGGGTCACTTTCTGCCAGAAGCATCTCTCGGA...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCAAGTTAGAGGGGCTCTaGAAGTCTCCAAAATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGKLEGL*KSPKCW Trigger: CCAGCATTTTGGAGACTTCCAGAGCCCCTCTAACTT...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | CCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGGCTGAGGTGCAATTCTaGGACTTGATTTCTAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PCFLFLGQTCRSIPLSGQAEVQF*DLISKD Trigger: GTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGC...CTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCCATGCTTCCTTTTCTTaGGTCAGACTTGCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGHASFS*VRLAEA Trigger: TGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATG...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | CGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGCAAAGAACTTGCAGATaGACAGAAAGTGGGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RFLSRRTKPRTDAAVLPRQRTCR*TESGPS Trigger: ACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTG...CCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTCCTAGGCAGGCCCTaGATCTCCTCAGACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAAVLGRP*ISSDLS Trigger: AGAAAGGTCTGAGGAGATCCAGGGCCTGCCTAGGAC...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCTCAGAAGCTTCGGAGCTGTCATAATCTACCAGACTCTGCGGTGTCCGCTGAGAGATCTGGGTTaGGATAGAAGATGTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLRSFGAVIIYQTLRCPLRDLG*DRRCNH Trigger: ATGGTTACATCTTCTATCTCAACCCAGATCTCTCAG...CGGACACCGCAGAGTCTGGTAGATTATGACAGCTCCGAAGCTTCTGAGGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | AGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCGTGTGTCAGCTAAAGTaGGCATGTCACTGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRFLSRRTKPRTDAAVLPVCQLK*ACHCPE Trigger: TTCTGGACAGTGACATGCTCACTTTAGCTGACACAC...GGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | CCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGTGCAATTCTGGGACTTaGTTTCTAAGGACTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PCFLFLGQTCRSIPLSGQCNSGT*FLRTSL Trigger: CAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCA...CTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR GCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTTCCAGAAACAGCCAGTaGCTTCCACAACCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAASRNSQ*LPQPHM Trigger: CATGTGGGGTTGTGGAAGGCACTGGCTGTTTCTGGA...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTGTGGAGCGGATCCATaGTTCCTTTTCTTGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGRRFLSRRTKPRTDAAVCGADP*FLFLGQ Trigger: CTGACCCAAGAAAAGGAAGCATGGATCCGCTCCACA...CACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACTCCGAGAGATGCTTCTaGCAGAAAGTGACCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYSERCF*QKVTQE Trigger: TTCCTGGGTCACTTTCTGCCAGAAGCATCTCTCGGA...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | AGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAAGTGCAGTTTCAGGTaGATTCTGGAGGCTACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRFLSRRTKPRTDAAVLPKCSFR*ILEATR Trigger: TCTCGTAGCCTCCAGAATCCACCTGAAACTGCACTT...GGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTGGTCAGCTGGAGGTAGATGCTCAGGGAGGCTTTGGCAGCCTCCAGCAAGAATATCTAGAGCATaGGGTTTCAAAAATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLWSAGGRCSGRLWQPPARISRA*GFKNSI Trigger: GATGCTATTTTTGAAACCCCATGCTCTAGATATTCT...TGCTGGAGGCTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGACCAGAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCGCTGAGGTGCAATTCTaGGACTTGATTTCTAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGAEVQF*DLISKD Trigger: GTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGC...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTAAGCATCCCACTCTCTaGTCAGCTGGAGGTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAAKHPTL*SAGGRC Trigger: GCATCTACCTCCAGCTGACCAGAGAGTGGGATGCTT...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | AGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCCAAAGAACTTGCAGATaGACAGAAAGTGGGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRFLSRRTKPRTDAAVLPQRTCR*TESGPS Trigger: ACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTG...GGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTCCACTGGCATTAGACTaGGCTACAGGGAAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDAPLALD*ATGKAG Trigger: TCCAGCCTTCCCTGTAGCTCAGTCTAATGCCAGTGG...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGCTGTTTGCTAAATGCTCACTTGTGGTTTCCTCCTCAGAAGCTTCGGAGCTCAATCACTGTTAACTaGAGGAGCTTCATCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCCLLNAHLWFPPQKLRSSITVN*RSFISR Trigger: CCGGGAGATGAAGCTCCTTCAGTTAACAGTGATTGA...GCTCCGAAGCTTCTGAGGAGGAAACCACAAGTGAGCATTTAGCAAACAGCAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGCTTCTGGCAGAAAGTaGCCCAGGAATTACTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPASGRK*PRNYLT Trigger: TGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGC...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGGGAGAAGCCGGAGCATaGGGCACTGTGAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRGEAGA*GTVRLV Trigger: CACCAGCCTCACAGTGCCTCATGCTCCGGCTTCTCC...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGAGTCTGCATCCAGGTTGAACTTCATCCCCTCCAAAGCAGGAAGGCTTCAGAATTCTGGAGCATaGGCATCAATTTGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPESASRLNFIPSKAGRLQNSGA*ASIWNR Trigger: TCGATTCCAAATTGATGCGCATGCTCCAGAATTCTG...AAGCCTTCCTGCTTTGGAGGGGATGAAGTTCAACCTGGATGCAGACTCAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCAAAGGAGTCAAGAGCTaGTTTAGACTTTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGKGVKS*FRLSAL Trigger: GAGAGCAGAAAGTCTAAAGCAGCTCTTGACTCCTTT...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | CGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGTTGCTGTTTGCTAAATaGTCACTTGTGGTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFLSRRTKPRTDAAVLPRLLFAK*SLVVSS Trigger: GGAGGAAACCACAAGTGAGCATTTAGCAAACAGCAA...CCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTATTCTTCTCTCTCAGCTaGAAATACAGTAGCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRRFLSRRTKPRTDAAVLFFSLS*KYSSEA Trigger: CGCCTCGCTACTGTATTTCCAGCTGAGAGAGAAGAA...TAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077967.13 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | TTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGGTTTCAGGTGGATTCTaGAGGCTACGAGAAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGRRFLSRRTKPRTDAAVVSGGF*RLREAQ Trigger: TTGAGCTTCTCGTAGCCTCCAGAATCCACCTGAAAC...CACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCAAAAATAGCATCCTCTaGCTCCTGAAGTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGKNSIL*LLKCSF Trigger: GAAACTGCACTTCAGGAGCCAGAGGATGCTATTTTT...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | GATCCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTAAAAATAGCATCCTCTaGCTCCTGAAGTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPCFLFLGQTCRSIPLSGKNSIL*LLKCSF Trigger: GAAACTGCACTTCAGGAGCCAGAGGATGCTATTTTT...ACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGCGGTGTCCGGGAAGGTaGGCCATTAGCTGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPRCPGR*AISWHW Trigger: CCAGTGCCAGCTAATGGCCCACCTTCCCGGACACCG...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCCTAAATGCTCACTTGTaGTTTCCTCCTCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGLNAHL*FPPQKL Trigger: AAGCTTCTGAGGAGGAAACCACAAGTGAGCATTTAG...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTCAGAGAAGGGAGAACTaGACTCTGCAGAGAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAAQRREN*TLQRAK Trigger: CTTTGCTCTCTGCAGAGTCCAGTTCTCCCTTCTCTG...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTACCTTCTCTCTCAGCTaGAAATACAGTAGCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAATFSLS*KYSSEA Trigger: CGCCTCGCTACTGTATTTCCAGCTGAGAGAGAAGGT...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | CCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCCTGAGAGATCTGGGTTaGGATAGAAGATGTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHCDSTAAKNLQMDRKWALRDLG*DRRCNH Trigger: ATGGTTACATCTTCTATCTCAACCCAGATCTCTCAG...GGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | ACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGCTGAGAGATCTGGGTTaGGATAGAAGATGTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLSIKENKAEDRCCCVTQLRDLG*DRRCNH Trigger: ATGGTTACATCTTCTATCTCAACCCAGATCTCTCAG...CTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTAGCTTCTGGCAGAAAGTaGCCCAGGAATTACTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GRRFLSRRTKPRTDAAVLASGRK*PRNYLT Trigger: TGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGC...TAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | TGCAGTTTCAGGTGGATTCTGGAGGCTACGAGAAGCTCAAGCAGCTCCAGAAAGAAATGCTGCTCTCTGTaGATGTGTGTCTTTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CSFRWILEATRSSSSSRKKCCSL*MCVFKD Trigger: ATCCTTAAAGACACACATTCACAGAGAGCAGCATTT...CTTTCTGGAGCTGCTTGAGCTTCTCGTAGCCTCCAGAATCCACCTGAAACTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGATCAGGACCAGTCCTaGGTCTGCATCCAGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDADQDQS*VCIQVE Trigger: TTCAACCTGGATGCAGACTCAGGACTGGTCCTGATC...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCATGCAATTCTGGGACTTaGTTTCTAAGGACTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPCNSGT*FLRTSL Trigger: CAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCA...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACAAGGAAACAGGTCTCTaGGGATATCAAGAAGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYKETGL*GYQEVE Trigger: CTCGACTTCTTGATATCCTCAGAGACCTGTTTCCTT...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | CCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCCAGAATTCTGGAGCATaGGCATCAATTTGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: PHCDSTAAKNLQMDRKWAQNSGA*ASIWNR Trigger: TCGATTCCAAATTGATGCGCATGCTCCAGAATTCTG...GGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGAGGACTCCGAGAGATaGTTCTGGCAGAAAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDAEDSER*FWQKVT Trigger: GGTCACTTTCTGCCAGAAGCATCTCTCGGAGTCCTC...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | GGATCCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTGGAAGTCTCCAAAATaGTGGGAAAATAAGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GSMLPFLGSDLPKHPTLWWKSPK*WENKEL Trigger: CAATTCCTTATTTTCCCAGCATTTTGGAGACTTCCA...CCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | TTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGAGGATGGCCCATGCTaGCCTGCCATGCCATCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFILGRRFLSRRTKPRTEDGPC*PAMPSS Trigger: GCTTGATGGCATGGCAGGCCAGCATGGGCCATCCTC...TGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | ACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGAAAAATAGCATCCTCTaGCTCCTGAAGTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLSIKENKAEDRCCCVTQKNSIL*LLKCSF Trigger: GAAACTGCACTTCAGGAGCCAGAGGATGCTATTTTT...CTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | CCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCCTTTTTATAAAAGCTaGAATAGGCCAGGCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PCFLFLGQTCRSIPLSGQPFYKS*NRPGKN Trigger: ATTCTTGCCTGGCCTATTCCAGCTTTTATAAAAAGG...CTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACGCTGAGGTGCAATTCTaGGACTTGATTTCTAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYAEVQF*DLISKD Trigger: GTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGC...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| 3UTR CAA 72 bp | AGATGTGCAGCGTCCCAGGACATTACACTGCACATCTaGATTTTAAGCTTCTGGCCTCTTGAGCTCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCAASQDITLHI*ILSFWPLELRR Trigger: TCTTCTGAGCTCAAGAGGCCAGAAGCTTAAAATCAAGATGTGCAGTGTAATGTCCTGGGACGCTGCACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
||
| CDS-3UTR TCA 90 bp | TTGTGGTTTCCTCCTCAGAAGCTTCGGAGCTGTCATAATCTACCAGACTCTGCGAAATGCTGCTCTCTGTaGATGTGTGTCTTTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWFPPQKLRSCHNLPDSAKCCSL*MCVFKD Trigger: ATCCTTAAAGACACACATTCACAGAGAGCAGCATTT...CGCAGAGTCTGGTAGATTATGACAGCTCCGAAGCTTCTGAGGAGGAAACCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | TTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGAATAAGAAAACACAGTaGGGGTTACAGCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRRFLSRRTKPRTDAAVNKKTQ*GLQPCP Trigger: TGGACATGGCTGTAACCCTCACTGTGTTTTCTTATT...CACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | AGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCTCCTCAGACCTTTCTTaGCATAAAGATGTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRFLSRRTKPRTDAAVLPSSDLS*HKDVCL Trigger: CAAACAGACATCTTTATGTCAAGAAAGGTCTGAGGA...GGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGCAGAATTCTGGAGCATaGGCATCAATTTGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGRRFLSRRTKPRTDAAVQNSGA*ASIWNR Trigger: TCGATTCCAAATTGATGCGCATGCTCCAGAATTCTG...CACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGTGGAAGTCTCCAAAATaGTGGGAAAATAAGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: AFYQGEQSRGQMLLCYPGWKSPK*WENKEL Trigger: CAATTCCTTATTTTCCCAGCATTTTGGAGACTTCCA...CCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | CGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGTGGGCCCAGTCTTTCTaGAGCAGTTTTAAATATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RFLSRRTKPRTDAAVLPRWAQSF*SSFKYL Trigger: TAAATATTTAAAACTGCTGCAGAAAGACTGGGCCCA...CCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGTGGGCCCAGTCTTTCTaGAGCAGTTTTAAATATTTA | + |
|
Preference number: 4 (lower is better) Translates to: AFYQGEQSRGQMLLCYPGWAQSF*SSFKYL Trigger: TAAATATTTAAAACTGCTGCAGAAAGACTGGGCCCA...CCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTCAGAGAAGGGAGAACTaGACTCTGCAGAGAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDAQRREN*TLQRAK Trigger: CTTTGCTCTCTGCAGAGTCCAGTTCTCCCTTCTCTG...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCTTAACATTTTGTGCTaGCTTCTGACCTTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYLNILC*LLTFSL Trigger: GAGAGAGAAGGTCAGAAGCCAGCACAAAATGTTAAG...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTTCAATCACTGTTAACTaGAGGAGCTTCATCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDASITVN*RSFISR Trigger: CCGGGAGATGAAGCTCCTTCAGTTAACAGTGATTGA...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTTGCAATTCTGGGACTTaGTTTCTAAGGACTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAACNSGT*FLRTSL Trigger: CAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCA...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGCATCGTCCTGCTCTATaGAGACCCTGGACAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRHRPAL*RPWTAT Trigger: AGTGGCTGTCCAGGGTCTTCATAGAGCAGGACGATG...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTCAGAATTCTGGAGCATaGGCATCAATTTGGAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAAQNSGA*ASIWNR Trigger: TCGATTCCAAATTGATGCGCATGCTCCAGAATTCTG...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | AGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCTGGAAGTCTCCAAAATaGTGGGAAAATAAGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: RRFLSRRTKPRTDAAVLPWKSPK*WENKEL Trigger: CAATTCCTTATTTTCCCAGCATTTTGGAGACTTCCA...GGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACATCAGCTGGAGGTAGATaGTCAGGGAGGCTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFILGRRFLSRRTKPRTSAGGR*SGRLWQ Trigger: CTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGA...TGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCATAAAGATGTCTGTTTaGTGTTTGCTAAATGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSIKENKAEDRCCCVTQGIKMSV*CLLNAH Trigger: GTGAGCATTTAGCAAACAGCAAACAGACATCTTTAT...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGGGGAGAACTGGACTCTaGAGAGAGCAAAGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPGRTGL*REQRLQ Trigger: CTGGAGCCTTTGCTCTCTGCAGAGTCCAGTTCTCCC...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGGGAGAACTGGACTCTaGAGAGAGCAAAGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFILGRRFLSRRTKPRTGRTGL*REQRLQ Trigger: CTGGAGCCTTTGCTCTCTGCAGAGTCCAGTTCTCCC...TGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCATTACTTAACATTTTGTaGTGGCTTCTGACCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPLLNIL*WLLTFS Trigger: AGAGAAGGTCAGAAGCCAGCACAAAATGTTAAGTAA...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGTTTCAGGTGGATTCTaGAGGCTACGAGAAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDAVSGGF*RLREAQ Trigger: TTGAGCTTCTCGTAGCCTCCAGAATCCACCTGAAAC...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | CGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGAGAATATCTAGAGCATaGGGTTTCAAAAATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RFLSRRTKPRTDAAVLPRRISRA*GFKNSI Trigger: GATGCTATTTTTGAAACCCCATGCTCTAGATATTCT...CCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATCAGATGGACAGAAAGTaGGCCCAGTCTTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFILGRRFLSRRTKPRTDQMDRK*AQSFCS Trigger: GCTGCAGAAAGACTGGGCCCACTTTCTGTCCATCTG...ATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | CAAGCATTCCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAACTGAGAGATCTGGGTTaGGATAGAAGATGTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QAFHIVIPLQQRTCRWTELRDLG*DRRCNH Trigger: ATGGTTACATCTTCTATCTCAACCCAGATCTCTCAG...TTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGGAATGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTACTTTCTGCTCTCTGTaGATGTGTGTCTTTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAATFCSL*MCVFKD Trigger: ATCCTTAAAGACACACATTCACAGAGAGCAGAAAGT...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGGATCAGGACCAGTCCTaGGTCTGCATCCAGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPDQDQS*VCIQVE Trigger: TTCAACCTGGATGCAGACTCAGGACTGGTCCTGATC...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTTCCTCAGACCTTTCTTaGCATAAAGATGTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAASSDLS*HKDVCL Trigger: CAAACAGACATCTTTATGTCAAGAAAGGTCTGAGGA...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGGAGGACTCCGAGAGATaGTTCTGGCAGAAAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPREDSER*FWQKVT Trigger: GGTCACTTTCTGCCAGAAGCATCTCTCGGAGTCCTC...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGTCCAGAAACAGCCAGTaGCTTCCACAACCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRSRNSQ*LPQPHM Trigger: CATGTGGGGTTGTGGAAGGCACTGGCTGTTTCTGGA...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATAGCATGTCATCGTCCTaGTCTATGAAGACCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFILGRRFLSRRTKPRTDSMSSS*SMKTLD Trigger: GTCCAGGGTCTTCATAGAGCAGGACGATGACATGCT...ATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCTTTTTATAAAAGCTaGAATAGGCCAGGCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRRFLSRRTKPRTDAAVLPFYKS*NRPGKN Trigger: ATTCTTGCCTGGCCTATTCCAGCTTTTATAAAAAGG...TAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGATCATGACCTGGCTCTaGGATTCGGAGGAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRIMTWL*DSEEAS Trigger: TGATGCCTCCTCCGAATCCCAGAGCCAGGTCATGAT...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATTCAATCACTGTTAACTaGAGGAGCTTCATCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFILGRRFLSRRTKPRTDSITVN*RSFISR Trigger: CCGGGAGATGAAGCTCCTTCAGTTAACAGTGATTGA...ATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGCTCTGGCTCCTGAAGTaGAGTTTCAGGTGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRLWLLK*SFRWIL Trigger: CAGAATCCACCTGAAACTGCACTTCAGGAGCCAGAG...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACATGTGGAGCGGATCCATaGTTCCTTTTCTTGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFILGRRFLSRRTKPRTCGADP*FLFLGQ Trigger: CTGACCCAAGAAAAGGAAGCATGGATCCGCTCCACA...TGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGCTATGTTCCTTTTaGTCCTCCCATGTCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPRLCSF*SSHVLG Trigger: GCCTAGGACATGGGAGGAGCAAAAGGAACATAGCCT...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGTCCGAGAGATGCTTCTaGCAGAAAGTGACCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRSERCF*QKVTQE Trigger: TTCCTGGGTCACTTTCTGCCAGAAGCATCTCTCGGA...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CAA 72 bp | ACTTTCATCTCAGCTGCTGAGGTGCAATTCTGGGACTaGATTTCTAAGGACTTCACTGTAATTAAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFISAAEVQFWD*ISKDFTVIKLA Trigger: AGCAAGCTTAATTACAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGCAGCTGAGATGAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| 3UTR CAA 72 bp | TATATGGAAAGAGATTTTTCTCCTGCAAACGGTAAATaGCTCCCTGTAGCTCCTCAAGGCATTTCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YMERDFSPANGK*LPVAPQGISLY Trigger: GTACAGTGAAATGCCTTGAGGAGCTACAGGGAGCAATTTACCGTTTGCAGGAGAAAAATCTCTTTCCATATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | GACGAGTATAACCAACTTCCTTTTTATAAAAGCTGGAATAGGCCAGGCAAGAATGCTTCTGGCAGAAAGTaGCCCAGGAATTACTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: DEYNQLPFYKSWNRPGKNASGRK*PRNYLT Trigger: TGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGC...ATTCTTGCCTGGCCTATTCCAGCTTTTATAAAAAGGAAGTTGGTTATACTCGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGGTGTGTCAGCTAAAGTaGGCATGTCACTGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRVCQLK*ACHCPE Trigger: TTCTGGACAGTGACATGCTCACTTTAGCTGACACAC...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATAAGGAAACAGGTCTCTaGGGATATCAAGAAGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFILGRRFLSRRTKPRTDKETGL*GYQEVE Trigger: CTCGACTTCTTGATATCCTCAGAGACCTGTTTCCTT...ATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGCTGCAGCAAAGAACTTaGAGATGGACAGAAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPLQQRT*RWTESG Trigger: CCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAG...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTATAAAGATGTCTGTTTaGTGTTTGCTAAATGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILGRRFLSRRTKPRTDAAIKMSV*CLLNAH Trigger: GTGAGCATTTAGCAAACAGCAAACAGACATCTTTAT...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGTTCTTCTCTCTCAGCTaGAAATACAGTAGCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPFFSLS*KYSSEA Trigger: CGCCTCGCTACTGTATTTCCAGCTGAGAGAGAAGAA...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077967.13 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAAGTTAGAGGGGCTCTaGAAGTCTCCAAAATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPKLEGL*KSPKCW Trigger: CCAGCATTTTGGAGACTTCCAGAGCCCCTCTAACTT...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAAGTGCAGTTTCAGGTaGATTCTGGAGGCTACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPKCSFR*ILEATR Trigger: TCTCGTAGCCTCCAGAATCCACCTGAAACTGCACTT...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACACATGCTTCCTTTTCTTaGGTCAGACTTGCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFILGRRFLSRRTKPRTHASFS*VRLAEA Trigger: TGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATG...TGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATCTGAGAGATCTGGGTTaGGATAGAAGATGTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFILGRRFLSRRTKPRTDLRDLG*DRRCNH Trigger: ATGGTTACATCTTCTATCTCAACCCAGATCTCTCAG...ATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGGCTTCTGGCAGAAAGTaGCCCAGGAATTACTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPASGRK*PRNYLT Trigger: TGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGC...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| CDS-3UTR CCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTCCTTTTTATAAAAGCTaGAATAGGCCAGGCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDAPFYKS*NRPGKN Trigger: ATTCTTGCCTGGCCTATTCCAGCTTTTATAAAAAGG...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAAATAAGAAAACACAGTaGGGGTTACAGCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFILGRRFLSRRTKPRTNKKTQ*GLQPCP Trigger: TGGACATGGCTGTAACCCTCACTGTGTTTTCTTATT...TGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGAAAGGAGTCAAGAGCTaGTTTAGACTTTCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRKGVKS*FRLSAL Trigger: GAGAGCAGAAAGTCTAAAGCAGCTCTTGACTCCTTT...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACATTGCTGTTTGCTAAATaGTCACTTGTGGTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFILGRRFLSRRTKPRTLLFAK*SLVVSS Trigger: GGAGGAAACCACAAGTGAGCATTTAGCAAACAGCAA...TGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CCA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTAGAATATCTAGAGCATaGGGTTTCAAAAATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FILGRRFLSRRTKPRTDARISRA*GFKNSI Trigger: GATGCTATTTTTGAAACCCCATGCTCTAGATATTCT...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS-3UTR CCA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGCTAAATGCTCACTTGTaGTTTCCTCCTCAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLFLFILGRRFLSRRTKPLNAHL*FPPQKL Trigger: AAGCTTCTGAGGAGGAAACCACAAGTGAGCATTTAG...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR TCA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACTTTCTGCTCTCTGTaGATGTGTGTCTTTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLFILGRRFLSRRTKPRTFCSL*MCVFKD Trigger: ATCCTTAAAGACACACATTCACAGAGAGCAGAAAGT...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS GCA 90 bp | CTCCCGGGTTCTGTCCATCTGAAGCTGTCTCTTGGGACACTCCTGTaGTCCAGGAAGGGTGGCCACCTCGTGGGAGGATGGCCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPGSVHLKLSLGTLL*SRKGGHLVGGWPML Trigger: CAGCATGGGCCATCCTCCCACGAGGTGGCCACCCTTCCTGGAGCACAGGAGTGTCCCAAGAGACAGCTTCAGATGGACAGAACCCGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153773.2 |
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| CDS CCA 90 bp | CCATCTGAAGCTGTCTCTTGGGACACTCCTGTGCTCCAGGAAGGGTaGCCACCTCGTGGGAGGATGGCCCATGCTGGCCTGCCATGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSEAVSWDTPVLQEG*PPRGRMAHAGLPCH Trigger: ATGGCATGGCAGGCCAGCATGGGCCATCCTCCCACGAGGTGGCCACCCTTCCTGGAGCACAGGAGTGTCCCAAGAGACAGCTTCAGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 |
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| CDS CCA 90 bp | GAAGGAGCTTCATCTCCCGGGTTCTGTCCATCTGAAGCTGTCTCTTaGGACACTCCTGTGCTCCAGGAAGGGTGGCCACCTCGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGASSPGFCPSEAVS*DTPVLQEGWPPRGR Trigger: CCTCCCACGAGGTGGCCACCCTTCCTGGAGCACAGGAGTGTCCCAAGAGACAGCTTCAGATGGACAGAACCCGGGAGATGAAGCTCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153773.2 |
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| CDS-3UTR CAA 90 bp | GCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCTGGAGCCACTCGCATGGGTaGTGTGGCTGTAGAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASFSWVRLAEASHSLVSWSHSHG*CGCREG Trigger: GCCCTCTCTACAGCCACACAACCCATGCGAGTGGCT...CCAGCTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
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| CDS-3UTR CAA 90 bp | TATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCTCAGACTCTGTACCCCTCCTTaGCGTGGGTCTCCGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YQGEQSRGQMLLCYPGLRLCTPP*RGSPFH Trigger: ATGAAACGGAGACCCACGCAAAGGAGGGGTACAGAG...TCTGAGCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CAA 90 bp | TTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGAGCCACTCGCATGGGTaGTGTGGCTGTAGAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGRRFLSRRTKPRTDAAVSHSHG*CGCREG Trigger: GCCCTCTCTACAGCCACACAACCCATGCGAGTGGCT...CACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCACTGGGAGAGTTTCCTaGGGCATCATGACCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSIKENKAEDRCCCVTQGTGRVS*GIMTWL Trigger: GAGCCAGGTCATGATGCCCAAGGAAACTCTCCCAGT...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCACTCTGTACCCCTCCTTaGCGTGGGTCTCCGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPLCTPP*RGSPFH Trigger: ATGAAACGGAGACCCACGCAAAGGAGGGGTACAGAG...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CAA 90 bp | ACTCTCTGGTCAGCTGGAGGTAGATGCTCAGGGAGGCTTTGGCAGCCTCCAGCAGTGCAATTCTGGGACTaGATTTCTAAGGACTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: TLWSAGGRCSGRLWQPPAVQFWD*ISKDFT Trigger: AGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCAC...TGCTGGAGGCTGCCAAAGCCTCCCTGAGCATCTACCTCCAGCTGACCAGAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS-3UTR CAA 90 bp | CGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGCCATGCTTCCTTTTCTaGGGTCAGACTTGCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFLSRRTKPRTDAAVLPRPCFLF*GQTCRS Trigger: GCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGG...CCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCCAGGCTATGTTCCTTTaGCTCCTCCCATGTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSIKENKAEDRCCCVTQGQAMFL*LLPCPR Trigger: CCTAGGACATGGGAGGAGCAAAAGGAACATAGCCTG...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | ATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCCAGTCTTTCTCTCTGTACCCCTCCTTaGCGTGGGTCTCCGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IPLQQRTCRWTESGPSLSLCTPP*RGSPFH Trigger: ATGAAACGGAGACCCACGCAAAGGAGGGGTACAGAG...AGAAAGACTGGGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CAA 90 bp | GATGCTGCTGTGTTACCCAGGGCTCAGACGTTAACACACTTGGCCTCCACACCTATGTGGGACAACAACTaGTCAGAATTCTGGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DAAVLPRAQTLTHLASTPMWDNN*SEFWSM Trigger: CATGCTCCAGAATTCTGACAAGTTGTTGTCCCACAT...AGGTGTGGAGGCCAAGTGTGTTAACGTCTGAGCCCTGGGTAACACAGCAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CAA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACACTGGGAGAGTTTCCTaGGGCATCATGACCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYTGRVS*GIMTWL Trigger: GAGCCAGGTCATGATGCCCAAGGAAACTCTCCCAGT...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAAAGAAACAATCCCACTaGCCAGACAGTCCCGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPKKQSH*PDSPVC Trigger: GCAGACGGGACTGTCTGGCAAGTGGGATTGTTTCTT...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS GCA 90 bp | CAGAGGCAACGCACTGCTTCACCACTCTCAGAGGACTCCGAGAGATaGTTCTGGCAGAAAGTGACCCAGGAATTACTTAACATTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QRQRTASPLSEDSER*FWQKVTQELLNILC Trigger: GCACAAAATGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGCATCTCTCGGAGTCCTCTGAGAGTGGTGAAGCAGTGCGTTGCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTAGCCACTCGCATGGGTaGTGTGGCTGTAGAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FILGRRFLSRRTKPRTDASHSHG*CGCREG Trigger: GCCCTCTCTACAGCCACACAACCCATGCGAGTGGCT...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | GTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACAAGAAACAATCCCACTaGCCAGACAGTCCCGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VDAFYQGEQSRGQMLLCYKKQSH*PDSPVC Trigger: GCAGACGGGACTGTCTGGCAAGTGGGATTGTTTCTT...GTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS TCA 90 bp | GGCATTAGACTGAGCTACAGGGAAGGCTGGACAGCCATCTTGTTCTaGGAGATCTGGGTTGAGATAGAAGATGTAACCATGGACGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GIRLSYREGWTAILF*EIWVEIEDVTMDVI Trigger: GATGACGTCCATGGTTACATCTTCTATCTCAACCCAGATCTCTCAGAACAAGATGGCTGTCCAGCCTTCCCTGTAGCTCAGTCTAATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153007.2 |
||
| CDS GCA 90 bp | ACTTCGCAGCCATGTGGGACAACAACTTGTCAGAATTCTGGAGCATaGGCATCTGGCTCAGCATCGTGTCAATCACTGTTAACTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSQPCGTTTCQNSGA*ASGSASCQSLLTEG Trigger: TCCTTCAGTTAACAGTGATTGACACGATGCTGAGCCAGATGCGCATGCTCCAGAATTCTGACAAGTTGTTGTCCCACATGGCTGCGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132351.8 |
||
| CDS CCA 90 bp | CAACGCACTGCTTCACCACTCTCAGAGGACTCCGAGAGATGCTTCTaGCAGAAAGTGACCCAGGAATTACTTAACATTTTGTGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QRTASPLSEDSERCF*QKVTQELLNILCWL Trigger: AAGCCAGCACAAAATGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGCATCTCTCGGAGTCCTCTGAGAGTGGTGAAGCAGTGCGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGTTTCCTCCTCAGAAGCTTCGGAGCTGTCATAATCTACCAGACTCTGCGGATGTGGGACAACAACTaGTCAGAATTCTGGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: CGFLLRSFGAVIIYQTLRMWDNN*SEFWSM Trigger: CATGCTCCAGAATTCTGACAAGTTGTTGTCCCACAT...CCGCAGAGTCTGGTAGATTATGACAGCTCCGAAGCTTCTGAGGAGGAAACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGGGCATGTGGGACAACAACTaGTCAGAATTCTGGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSIKENKAEDRCCCVTQGMWDNN*SEFWSM Trigger: CATGCTCCAGAATTCTGACAAGTTGTTGTCCCACAT...GCCCTGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CAA 90 bp | CCATGCTTCCTTTTCTTGGGTCAGACTTGCCGAAGCATCCCACTCTCTGGTCAGCAGAGAAGGCACTTTTaGACGAGTATAACCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PCFLFLGQTCRSIPLSGQQRRHF*TSITNF Trigger: GAAGTTGGTTATACTCGTCAAAAAGTGCCTTCTCTG...CTGACCAGAGAGTGGGATGCTTCGGCAAGTCTGACCCAAGAAAAGGAAGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
||
| CDS TCA 90 bp | CTACAGGGAAGGCTGGACAGCCATCTTGTTCTGAGAGATCTGGGTTaGGATAGAAGATGTAACCATGGACGTCATCTTCAAGAGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQGRLDSHLVLRDLG*DRRCNHGRHLQEWF Trigger: GAACCACTCTTGAAGATGACGTCCATGGTTACATCTTCTATCTCAACCCAGATCTCTCAGAACAAGATGGCTGTCCAGCCTTCCCTGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153007.2 |
||
| CDS CCA 90 bp | TGCTTCTGGCAGAAAGTGACCCAGGAATTACTTAACATTTTGTGCTaGCTTCTGACCTTCTCTCTCAGCTGGAAATACAGTAGCGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CFWQKVTQELLNILC*LLTFSLSWKYSSEA Trigger: CGCCTCGCTACTGTATTTCCAGCTGAGAGAGAAGGTCAGAAGCCAGCACAAAATGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | CCACATTGTGATTCCACTGCAGCAAAGAACTTGCAGATGGACAGAAAGTGGGCCATGTGGGACAACAACTaGTCAGAATTCTGGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PHCDSTAAKNLQMDRKWAMWDNN*SEFWSM Trigger: CATGCTCCAGAATTCTGACAAGTTGTTGTCCCACAT...GGCCCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGTGGAATCACAATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065323.14 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS-3UTR CAA 90 bp | GGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTAACTGCAGCAAAGAACTaGCAGATGGACAGAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRRFLSRRTKPRTDAAVLTAAKN*QMDRKW Trigger: CCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGT...TAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCAGCAACTCTACCCTaGGCAGAGAAGGGAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FILGRRFLSRRTKPRTDAAATLP*AEKGEL Trigger: CAGTTCTCCCTTCTCTGCCAAGGGTAGAGTTGCTGC...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS CCA 90 bp | GTGGCTGTAGAGAGGGCTTTCATCTCAGCTGCTGAGGTGCAATTCTaGGACTTGATTTCTAAGGACTTCACTGTAATTAAGCTTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VAVERAFISAAEVQF*DLISKDFTVIKLAA Trigger: AGCAGCAAGCTTAATTACAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGCAGCTGAGATGAAAGCCCTCTCTACAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
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| CDS-3UTR CAA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCACAGAGAAGGCACTTTTaGACGAGTATAACCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPQRRHF*TSITNF Trigger: GAAGTTGGTTATACTCGTCAAAAAGTGCCTTCTCTG...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
||
| CDS-3UTR CAA 90 bp | GACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGTTACCCAGTGCAATTCTGGGACTaGATTTCTAAGGACTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: DAFYQGEQSRGQMLLCYPVQFWD*ISKDFT Trigger: AGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCAC...TGGGTAACACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS-3UTR CAA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTCAGGCTATGTTCCTTTaGCTCCTCCCATGTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FILGRRFLSRRTKPRTDAQAMFL*LLPCPR Trigger: CCTAGGACATGGGAGGAGCAAAAGGAACATAGCCTG...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS GCA 90 bp | ACTTCGCAGCCATGTGGGACAACAACTTGTCAGAATTCTGGAGCATaGGCATCAATTTGGAATCGAGTTCAACAGACTGCAAAAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TSQPCGTTTCQNSGA*ASIWNRVQQTAKGL Trigger: AAGTCCTTTTGCAGTCTGTTGAACTCGATTCCAAATTGATGCGCATGCTCCAGAATTCTGACAAGTTGTTGTCCCACATGGCTGCGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| CDS-3UTR CAA 90 bp | TTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATCTCTGTACCCCTCCTTaGCGTGGGTCTCCGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LFILGRRFLSRRTKPRTDLCTPP*RGSPFH Trigger: ATGAAACGGAGACCCACGCAAAGGAGGGGTACAGAG...ATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| CDS-3UTR CAA 90 bp | ATGTTACTCCAGCTGGAAAGCTATGCTCAAAACAGAAGAGAAAATAACCATGGTCTCTGTACCCCTCCTTaGCGTGGGTCTCCGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: MLLQLESYAQNRRENNHGLCTPP*RGSPFH Trigger: ATGAAACGGAGACCCACGCAAAGGAGGGGTACAGAG...ACCATGGTTATTTTCTCTTCTGTTTTGAGCATAGCTTTCCAGCTGGAGTAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130161.9 |
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| CDS-3UTR CAA 90 bp | TTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTGTGGTGCAATTCTGGGACTaGATTTCTAAGGACTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LGRRFLSRRTKPRTDAAVVQFWD*ISKDFT Trigger: AGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCAC...CACAGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS-3UTR CAA 90 bp | TTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTACTGCAGCAAAGAACTaGCAGATGGACAGAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FILGRRFLSRRTKPRTDATAAKN*QMDRKW Trigger: CCACTTTCTGTCCATCTGCAAGTTCTTTGCTGCAGT...AGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS-3UTR CAA 90 bp | ATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGACAGATGCTGCTATGTCTGTTTGCTGTTaGCTAAATGCTCACTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILGRRFLSRRTKPRTDAAMSVCC*LNAHLW Trigger: CCACAAGTGAGCATTTAGCAAACAGCAAACAGACAT...AGCAGCATCTGTCCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS-3UTR CAA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGGCAGCAACTCTACCCTaGGCAGAGAAGGGAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: CLFLFILGRRFLSRRTKPAATLP*AEKGEL Trigger: CAGTTCTCCCTTCTCTGCCAAGGGTAGAGTTGCTGC...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS-3UTR CAA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGTTGCTAAATGCTCACTaGTGGTTTCCTCCTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFLFILGRRFLSRRTKPRLLNAH*WFPPQK Trigger: CTTCTGAGGAGGAAACCACAAGTGAGCATTTAGCAA...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS-3UTR CAA 90 bp | TGCTTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGTTGCTAAATGCTCACTaGTGGTTTCCTCCTCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLFLFILGRRFLSRRTKPLLNAH*WFPPQK Trigger: CTTCTGAGGAGGAAACCACAAGTGAGCATTTAGCAA...CGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS-3UTR CAA 90 bp | TTGTTTTTATTTATCTTAGGTAGACGCTTTCTATCAAGGAGAACAAAGCCGAGGCAGAGAAGGCACTTTTaGACGAGTATAACCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLFILGRRFLSRRTKPRQRRHF*TSITNF Trigger: GAAGTTGGTTATACTCGTCAAAAAGTGCCTTCTCTG...CCTCGGCTTTGTTCTCCTTGATAGAAAGCGTCTACCTAAGATAAATAAAAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077967.13 ENSMUST00000121777.9 |
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| CDS GCA 72 bp | CCAGGAAGGGTGGCCACCTCGTGGGAGGATGGCCCATaGTGGCCTGCCATGCCATCAAGCACACCACTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGRVATSWEDGP*WPAMPSSTPLA Trigger: TGCCAGTGGTGTGCTTGATGGCATGGCAGGCCAGCATGGGCCATCCTCCCACGAGGTGGCCACCCTTCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 |
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| CDS CCA 72 bp | GGACACTCCTGTGCTCCAGGAAGGGTGGCCACCTCGTaGGAGGATGGCCCATGCTGGCCTGCCATGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GHSCAPGRVATS*EDGPCWPAMPS Trigger: TGATGGCATGGCAGGCCAGCATGGGCCATCCTCCCACGAGGTGGCCACCCTTCCTGGAGCACAGGAGTGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 |
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| CDS CCA 72 bp | GCTGTCTCTTGGGACACTCCTGTGCTCCAGGAAGGGTaGCCACCTCGTGGGAGGATGGCCCATGCTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVSWDTPVLQEG*PPRGRMAHAGL Trigger: CAGGCCAGCATGGGCCATCCTCCCACGAGGTGGCCACCCTTCCTGGAGCACAGGAGTGTCCCAAGAGACAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 |
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| CDS CCA 72 bp | GGAAGGGTGGCCACCTCGTGGGAGGATGGCCCATGCTaGCCTGCCATGCCATCAAGCACACCACTGGCATTA | + |
|
Preference number: 6 (lower is better) Translates to: GRVATSWEDGPC*PAMPSSTPLAL Trigger: TAATGCCAGTGGTGTGCTTGATGGCATGGCAGGCCAGCATGGGCCATCCTCCCACGAGGTGGCCACCCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 |
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| CDS GCA 72 bp | TCTGTCCATCTGAAGCTGTCTCTTGGGACACTCCTGTaGTCCAGGAAGGGTGGCCACCTCGTGGGAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SVHLKLSLGTLL*SRKGGHLVGGW Trigger: CCATCCTCCCACGAGGTGGCCACCCTTCCTGGAGCACAGGAGTGTCCCAAGAGACAGCTTCAGATGGACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153773.2 |
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| CDS CCA 72 bp | TCATCTCCCGGGTTCTGTCCATCTGAAGCTGTCTCTTaGGACACTCCTGTGCTCCAGGAAGGGTGGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SSPGFCPSEAVS*DTPVLQEGWPP Trigger: AGGTGGCCACCCTTCCTGGAGCACAGGAGTGTCCCAAGAGACAGCTTCAGATGGACAGAACCCGGGAGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153773.2 |
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| CDS CAA 72 bp | GAGGCGAGGCACTTCGCAGCCATGTGGGACAACAACTaGTCAGAATTCTGGAGCATGCGCATCTGGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EARHFAAMWDNN*SEFWSMRIWLS Trigger: GCTGAGCCAGATGCGCATGCTCCAGAATTCTGACAAGTTGTTGTCCCACATGGCTGCGAAGTGCCTCGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132351.8 |
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| CDS CAA 72 bp | TGCTCTATGAAGACCCTGGACAGCCACTCGCATGGGTaGTGTGGCTGTAGAGAGGGCTTTCATCTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSMKTLDSHSHG*CGCREGFHLSC Trigger: GCAGCTGAGATGAAAGCCCTCTCTACAGCCACACAACCCATGCGAGTGGCTGTCCAGGGTCTTCATAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
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| CDS CAA 90 bp | TACAGTAGCGAGGCGAGGCACTTCGCAGCCATGTGGGACAACAACTaGTCAGAATTCTGGAGCATGCGCATCTGGCTCAGCATCGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: YSSEARHFAAMWDNN*SEFWSMRIWLSIVS Trigger: TGACACGATGCTGAGCCAGATGCGCATGCTCCAGAATTCTGACAAGTTGTTGTCCCACATGGCTGCGAAGTGCCTCGCCTCGCTACTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132351.8 |
||
| CDS TCA 72 bp | CCTGCCATGCCATCAAGCACACCACTGGCATTAGACTaGGCTACAGGGAAGGCTGGACAGCCATCTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAMPSSTPLALD*ATGKAGQPSCS Trigger: AGAACAAGATGGCTGTCCAGCCTTCCCTGTAGCTCAGTCTAATGCCAGTGGTGTGCTTGATGGCATGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153007.2 |
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| CDS CCA 72 bp | AACATTTTGTGCTGGCTTCTGACCTTCTCTCTCAGCTaGAAATACAGTAGCGAGGCGAGGCACTTCGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NILCWLLTFSLS*KYSSEARHFAA Trigger: GGCTGCGAAGTGCCTCGCCTCGCTACTGTATTTCCAGCTGAGAGAGAAGGTCAGAAGCCAGCACAAAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
||
| CDS CAA 72 bp | GCAAAAGGACTTCAGTTAGCTCTCTGTACCCCTCCTTaGCGTGGGTCTCCGTTTCATCAGACAGTACCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AKGLQLALCTPP*RGSPFHQTVPG Trigger: GCCAGGTACTGTCTGATGAAACGGAGACCCACGCAAAGGAGGGGTACAGAGAGCTAACTGAAGTCCTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS GCA 72 bp | CGCACTGCTTCACCACTCTCAGAGGACTCCGAGAGATaGTTCTGGCAGAAAGTGACCCAGGAATTACTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: RTASPLSEDSER*FWQKVTQELLN Trigger: GTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGCATCTCTCGGAGTCCTCTGAGAGTGGTGAAGCAGTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153773.2 |
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| CDS CAA 72 bp | GAGGCGAGGCACTTCGCAGCCATGTGGGACAACAACTaGTCAGAATTCTGGAGCATGCGCATCAATTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EARHFAAMWDNN*SEFWSMRINLE Trigger: TTCCAAATTGATGCGCATGCTCCAGAATTCTGACAAGTTGTTGTCCCACATGGCTGCGAAGTGCCTCGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS CAA 90 bp | TACAGTAGCGAGGCGAGGCACTTCGCAGCCATGTGGGACAACAACTaGTCAGAATTCTGGAGCATGCGCATCAATTTGGAATCGAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YSSEARHFAAMWDNN*SEFWSMRINLESSS Trigger: TGAACTCGATTCCAAATTGATGCGCATGCTCCAGAATTCTGACAAGTTGTTGTCCCACATGGCTGCGAAGTGCCTCGCCTCGCTACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
||
| CDS GCA 72 bp | TTTTATCACAGCTGTAAGGATCCAGAGGCAACGCACTaGTTCACCACTCTCAGAGGACTCCGAGAGATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FYHSCKDPEATH*FTTLRGLREML Trigger: AAGCATCTCTCGGAGTCCTCTGAGAGTGGTGAAGCAGTGCGTTGCCTCTGGATCCTTACAGCTGTGATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153773.2 |
||
| CDS TCA 72 bp | CTGAGCTACAGGGAAGGCTGGACAGCCATCTTGTTCTaGGAGATCTGGGTTGAGATAGAAGATGTAACCATG | + |
|
Preference number: 6 (lower is better) Translates to: LSYREGWTAILF*EIWVEIEDVTM Trigger: CATGGTTACATCTTCTATCTCAACCCAGATCTCTCAGAACAAGATGGCTGTCCAGCCTTCCCTGTAGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000132351.8 ENSMUST00000133771.9 ENSMUST00000153007.2 |
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| CDS CAA 90 bp | GTAGAGAGGGCTTTCATCTCAGCTGCTGAGGTGCAATTCTGGGACTaGATTTCTAAGGACTTCACTGTAATTAAGCTTGCTGCTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VERAFISAAEVQFWD*ISKDFTVIKLAALR Trigger: CCTGAGAGCAGCAAGCTTAATTACAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGCAGCTGAGATGAAAGCCCTCTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
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| CDS GCA 72 bp | AGCATGCGCATCAATTTGGAATCGAGTTCAACAGACTaGAAAAGGACTTCAGTTAGCTCTCTGTACCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SMRINLESSSTD*KRTSVSSLYPS Trigger: GGAGGGGTACAGAGAGCTAACTGAAGTCCTTTTGCAGTCTGTTGAACTCGATTCCAAATTGATGCGCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| CDS CAA 90 bp | GAGAGATGCTTCTGGCAGAAAGTGACCCAGGAATTACTTAACATTTaGTGCTGGCTTCTGACCTTCTCTCTCAGCTGGAAATACAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ERCFWQKVTQELLNI*CWLLTFSLSWKYSS Trigger: GCTACTGTATTTCCAGCTGAGAGAGAAGGTCAGAAGCCAGCACAAAATGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAAGCATCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
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| CDS GCA 72 bp | CCATGTGGGACAACAACTTGTCAGAATTCTGGAGCATaGGCATCAATTTGGAATCGAGTTCAACAGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: PCGTTTCQNSGA*ASIWNRVQQTA Trigger: TGCAGTCTGTTGAACTCGATTCCAAATTGATGCGCATGCTCCAGAATTCTGACAAGTTGTTGTCCCACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| CDS GCA 72 bp | TGGCAGAAAGTGACCCAGGAATTACTTAACATTTTGTaGTGGCTTCTGACCTTCTCTCTCAGCTGGAAATAC | + |
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Preference number: 6 (lower is better) Translates to: WQKVTQELLNIL*WLLTFSLSWKY Trigger: GTATTTCCAGCTGAGAGAGAAGGTCAGAAGCCAGCACAAAATGTTAAGTAATTCCTGGGTCACTTTCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
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| CDS CCA 72 bp | GAGAGGGCTTTCATCTCAGCTGCTGAGGTGCAATTCTaGGACTTGATTTCTAAGGACTTCACTGTAATTAAG | + |
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Preference number: 6 (lower is better) Translates to: ERAFISAAEVQF*DLISKDFTVIK Trigger: CTTAATTACAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGCAGCTGAGATGAAAGCCCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
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| CDS CAA 72 bp | TTCTGGCAGAAAGTGACCCAGGAATTACTTAACATTTaGTGCTGGCTTCTGACCTTCTCTCTCAGCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: FWQKVTQELLNI*CWLLTFSLSWK Trigger: TTTCCAGCTGAGAGAGAAGGTCAGAAGCCAGCACAAAATGTTAAGTAATTCCTGGGTCACTTTCTGCCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
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| CDS CCA 72 bp | ACAACTTGTCAGAATTCTGGAGCATGCGCATCAATTTaGAATCGAGTTCAACAGACTGCAAAAGGACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TTCQNSGACASI*NRVQQTAKGLQ Trigger: CTGAAGTCCTTTTGCAGTCTGTTGAACTCGATTCCAAATTGATGCGCATGCTCCAGAATTCTGACAAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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| CDS CCA 72 bp | CAGAAAGTGACCCAGGAATTACTTAACATTTTGTGCTaGCTTCTGACCTTCTCTCTCAGCTGGAAATACAGT | + |
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Preference number: 6 (lower is better) Translates to: QKVTQELLNILC*LLTFSLSWKYS Trigger: ACTGTATTTCCAGCTGAGAGAGAAGGTCAGAAGCCAGCACAAAATGTTAAGTAATTCCTGGGTCACTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121777.9 |
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| CDS CAA 72 bp | GCTTTCATCTCAGCTGCTGAGGTGCAATTCTGGGACTaGATTTCTAAGGACTTCACTGTAATTAAGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: AFISAAEVQFWD*ISKDFTVIKLA Trigger: AGCAAGCTTAATTACAGTGAAGTCCTTAGAAATCAAGTCCCAGAATTGCACCTCAGCAGCTGAGATGAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133199.3 |
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| CDS CAA 72 bp | AACAACTTGTCAGAATTCTGGAGCATGCGCATCAATTaGGAATCGAGTTCAACAGACTGCAAAAGGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: NNLSEFWSMRIN*ESSSTDCKRTS Trigger: TGAAGTCCTTTTGCAGTCTGTTGAACTCGATTCCAAATTGATGCGCATGCTCCAGAATTCTGACAAGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065323.14 ENSMUST00000077967.13 ENSMUST00000121777.9 ENSMUST00000130161.9 ENSMUST00000133771.9 |
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