Pregenerated sensors for LINGO4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044505Ensembl transcript IDs: ENSMUST00000050975.6
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCACTGCAGTGGCTTGTGACAGTCAGGAAGGTGGTGGAGGCTCCTaGAGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: ATAVACDSQEGGGGS*RQRPHSPACTGILG Trigger: GCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGCCTCCACCACCTTCCTGACTGTCACAAGCCACTGCAGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 90 bp | TGGCTGGATTGGGTACCGGGTAGCAGAAAAGAACGGGAGCCTGCCTaGCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: WLDWVPGSRKEREPA*LPACLPACLGADSK Trigger: TTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCCGTTCTTTTCTGCTACCCGGTACCCAATCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 90 bp | TGGTGGAGGCTCCTGCAGGCAGAGGCCACACTCCCCTGCATGCACTaGAATCCTTGGCTGGAATCCCTTCCTGTACCTAAGGGCACTGGC | + |
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Preference number: 1 (lower is better) Translates to: WWRLLQAEATLPCMH*NPWLESLPVPKGTG Trigger: GCCAGTGCCCTTAGGTACAGGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGCCTCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 90 bp | GTACCGGGTAGCAGAAAAGAACGGGAGCCTGCCTGCCTGCCTGCCTaGCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCTGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: VPGSRKEREPACLPA*LPACLGADSKKLEM Trigger: CATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCCGTTCTTTTCTGCTACCCGGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 90 bp | TGGATTGGGTACCGGGTAGCAGAAAAGAACGGGAGCCTGCCTGCCTaGCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: WIGYRVAEKNGSLPA*LPACLPALEQTLKS Trigger: GCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCCGTTCTTTTCTGCTACCCGGTACCCAATCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 90 bp | GAAGGTGGTGGAGGCTCCTGCAGGCAGAGGCCACACTCCCCTGCATaGACTGGAATCCTTGGCTGGAATCCCTTCCTGTACCTAAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: EGGGGSCRQRPHSPA*TGILGWNPFLYLRA Trigger: TGCCCTTAGGTACAGGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGCCTCCACCACCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 90 bp | TGGAGAGCAGACCGGAGCCTTGTCAGCTTTCCTGCCTTGTGTGAGTaGGTGCCTGGGATCAGGGGATGTGCTGGCGATGAGGTCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: WRADRSLVSFPALCE*VPGIRGCAGDEVCV Trigger: GACACAGACCTCATCGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGACAAGGCTCCGGTCTGCTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 90 bp | TGGGTGCCTGGGATCAGGGGATGTGCTGGCGATGAGGTCTGTGTCTaGAGTTCCCTGGGTCCCTCAGAGAAGATGCAGCAATGCCATGCT | + |
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Preference number: 1 (lower is better) Translates to: WVPGIRGCAGDEVCV*SSLGPSEKMQQCHA Trigger: AGCATGGCATTGCTGCATCTTCTCTGAGGGACCCAGGGAACTGCAGACACAGACCTCATCGCCAGCACATCCCCTGATCCCAGGCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 90 bp | TCAGGAAGGTGGTGGAGGCTCCTGCAGGCAGAGGCCACACTCCCCTaGATGCACTGGAATCCTTGGCTGGAATCCCTTCCTGTACCTAAG | + |
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Preference number: 1 (lower is better) Translates to: SGRWWRLLQAEATLP*MHWNPWLESLPVPK Trigger: CTTAGGTACAGGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGCCTCCACCACCTTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 90 bp | TGGAATCCTTGGCTGGAATCCCTTCCTGTACCTAAGGGCACTGGCTaGATTGGGTACCGGGTAGCAGAAAAGAACGGGAGCCTGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: WNPWLESLPVPKGTG*IGYRVAEKNGSLPA Trigger: GGCAGGCAGGCTCCCGTTCTTTTCTGCTACCCGGTACCCAATCCAGCCAGTGCCCTTAGGTACAGGAAGGGATTCCAGCCAAGGATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR TCA 90 bp | TCTCAACAGAGGAGAGGAAAGGGGAAAGGATGCAGACCAAGGGGATaGGAAGTGCTGACATCTGCAGGCTCCTGGCCCTCCTCACCTGTG | + |
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Preference number: 1 (lower is better) Translates to: SQQRRGKGKGCRPRG*EVLTSAGSWPSSPV Trigger: CACAGGTGAGGAGGGCCAGGAGCCTGCAGATGTCAGCACTTCTCATCCCCTTGGTCTGCATCCTTTCCCCTTTCCTCTCCTCTGTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 90 bp | GGATCAGGGGATGTGCTGGCGATGAGGTCTGTGTCTGCAGTTCCCTaGGTCCCTCAGAGAAGATGCAGCAATGCCATGCTCAGACTAGAG | + |
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Preference number: 1 (lower is better) Translates to: GSGDVLAMRSVSAVP*VPQRRCSNAMLRLE Trigger: CTCTAGTCTGAGCATGGCATTGCTGCATCTTCTCTGAGGGACCCAGGGAACTGCAGACACAGACCTCATCGCCAGCACATCCCCTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 90 bp | GTCTGTGTCTGCAGTTCCCTGGGTCCCTCAGAGAAGATGCAGCAATaGCATGCTCAGACTAGAGCAGCAATCATAATGCAGGCGACAGGT | + |
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Preference number: 1 (lower is better) Translates to: VCVCSSLGPSEKMQQ*HAQTRAAIIMQATG Trigger: ACCTGTCGCCTGCATTATGATTGCTGCTCTAGTCTGAGCATGGCATTGCTGCATCTTCTCTGAGGGACCCAGGGAACTGCAGACACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 90 bp | GTTGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATaGAGAGCAGACCGGAGCCTTGTCAGCTTTCCTGCCTTGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VVFGTWSWLLEDIQT*RADRSLVSFPALCE Trigger: CTCACACAAGGCAGGAAAGCTGACAAGGCTCCGGTCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 90 bp | TGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCTaGAGATGCTTCTCAGCTCCACTTCTGAAACAATCTTGTGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: CLPACLPALEQTLKS*RCFSAPLLKQSCGC Trigger: ACAACCACAAGATTGTTTCAGAAGTGGAGCTGAGAAGCATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR TCA 90 bp | ATCATAATGCAGGCGACAGGTGTGGGAAGGCTGTGCTGTTTGGCATaGAGCTGTGGTTCAGAGACCTTAGTCCTACTTCTCCCTTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: IIMQATGVGRLCCLA*SCGSETLVLLLPLA Trigger: AGCCAAAGGGAGAAGTAGGACTAAGGTCTCTGAACCACAGCTTCATGCCAAACAGCACAGCCTTCCCACACCTGTCGCCTGCATTATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 90 bp | ATAGGAGAGTTCTGTGTAGGAATCCCTCCAAAGATAGCAGCATCTTaGCTTCTTTGTCTCAACAGAGGAGAGGAAAGGGGAAAGGATGCA | + |
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Preference number: 1 (lower is better) Translates to: IGEFCVGIPPKIAAS*LLCLNRGEERGKDA Trigger: TGCATCCTTTCCCCTTTCCTCTCCTCTGTTGAGACAAAGAAGGCAAGATGCTGCTATCTTTGGAGGGATTCCTACACAGAACTCTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 90 bp | AGATGCTTCTCAGCTCCACTTCTGAAACAATCTTGTGGTTGTGTTTaGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: RCFSAPLLKQSCGCV*HLVLAIRGYTDMES Trigger: GCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACAACCACAAGATTGTTTCAGAAGTGGAGCTGAGAAGCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTGCAGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAGCCTGCCTGCCTGCCTaGCTTGGAGCAGACTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: APAGRGHTPLHALESLAGACLPA*LGADSK Trigger: TTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGC...TCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCCTGCCTTGTGTGAGTaGGTGCCTGGGATCAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RQRPHSPACTGILGWNPFPALCE*VPGIRG Trigger: TCCCCTGATCCCAGGCACCCACTCACACAAGGCAGG...GAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGATGTGCTGGCGATGAGGTCTGTGTCTGCAGTTCCCTGGGTCCCTCAGAGATCTCCCTTTGGCTTCTaGAGTGGACTTGGGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GDVLAMRSVSAVPWVPQRSPFGF*SGLGWS Trigger: AGACCACCCAAGTCCACTTCAGAAGCCAAAGGGAGA...TCTCTGAGGGACCCAGGGAACTGCAGACACAGACCTCATCGCCAGCACATCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCGTGTCTGCAGTTCCCTaGGTCCCTCAGAGAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: RQRPHSPACTGILGWNPFVSAVP*VPQRRC Trigger: GCATCTTCTCTGAGGGACCCAGGGAACTGCAGACAC...GAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGGCTTTCCCTTTGCCAAGCATGCCTGGAATACACAACACTGGGAACCGCCCTTGTGTGAGTGGGTaGCTGGGATCAGGGGATGTG | + |
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Preference number: 2 (lower is better) Translates to: PLAFPLPSMPGIHNTGNRPCVSG*LGSGDV Trigger: CACATCCCCTGATCCCAGGCACCCACTCACACAAGG...GCGGTTCCCAGTGTTGTGTATTCCAGGCATGCTTGGCAAAGGGAAAGCCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGAAGTAAATGAAGTTCCAGAGATCATGTTTCCTTCTGCTGCCACTGCAGTGGCCTGCCTGCCTGCCTaGCTGCCTGCCTTGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VEVNEVPEIMFPSAATAVACLPA*LPALEQ Trigger: CTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGC...CACTGCAGTGGCAGCAGAAGGAAACATGATCTCTGGAACTTCATTTACTTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGGTCCCTCAGAGAAGATGCAGCAATGCCATGCTCAGACTAGAGCAGCAATCCTACTTCTCCCTTTaGCTTCTGAAGTGGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: PWVPQRRCSNAMLRLEQQSYFSL*LLKWTW Trigger: CCAAGTCCACTTCAGAAGCCAAAGGGAGAAGTAGGA...TTGCTGCTCTAGTCTGAGCATGGCATTGCTGCATCTTCTCTGAGGGACCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGATGCAGGCGACAGGTGTaGGAAGGCTGTGCTGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: CVWHLVLAIRGYTDMESRCRRQV*EGCAVW Trigger: CCAAACAGCACAGCCTTCCCACACCTGTCGCCTGCA...TCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGACCTGTGCTGTTTGGCATaGAGCTGTGGTTCAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: VFGTWSWLLEDIQTWRADLCCLA*SCGSET Trigger: GGTCTCTGAACCACAGCTTCATGCCAAACAGCACAG...GTCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGCTTTCCCTTTGCCAAGCATGCCTGGAATACACAACACTGGGAACCGCCTTCTGAAGTGGACTTaGGTGGTCTTTAGCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: PLAFPLPSMPGIHNTGNRLLKWT*VVFSMD Trigger: ATCCATGCTAAAGACCACCCAAGTCCACTTCAGAAG...GCGGTTCCCAGTGTTGTGTATTCCAGGCATGCTTGGCAAAGGGAAAGCCAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGCTTTCCCTTTGCCAAGCATGCCTGGAATACACAACACTGGGAACCGCAGGCTAGATGACCAGTaGCTAAAATGGGAAGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PLAFPLPSMPGIHNTGNRRLDDQ*LKWEEV Trigger: TACTTCTTCCCATTTTAGCCACTGGTCATCTAGCCT...GCGGTTCCCAGTGTTGTGTATTCCAGGCATGCTTGGCAAAGGGAAAGCCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CAA 90 bp | GTTCTGTGTAGGAATCCCTCCAAAGATAGCAGCATCTTGCCTTCTTaGTCTCAACAGAGGAGAGGAAAGGGGAAAGGATGCAGACCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VLCRNPSKDSSILPS*SQQRRGKGKGCRPR Trigger: CCTTGGTCTGCATCCTTTCCCCTTTCCTCTCCTCTGTTGAGACAAAGAAGGCAAGATGCTGCTATCTTTGGAGGGATTCCTACACAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTATTAGAGGATATACAGACATGGAGAGCAGACCGGAGCCTTGTCAGCTTGAGAAGATGCAGCAATaGCATGCTCAGACTAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LAIRGYTDMESRPEPCQLEKMQQ*HAQTRA Trigger: TGCTCTAGTCTGAGCATGGCATTGCTGCATCTTCTC...AAGCTGACAAGGCTCCGGTCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CAA 90 bp | AATAGGAGAGTTCTGTGTAGGAATCCCTCCAAAGATAGCAGCATCTaGCCTTCTTTGTCTCAACAGAGGAGAGGAAAGGGGAAAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: NRRVLCRNPSKDSSI*PSLSQQRRGKGKGC Trigger: GCATCCTTTCCCCTTTCCTCTCCTCTGTTGAGACAAAGAAGGCAAGATGCTGCTATCTTTGGAGGGATTCCTACACAGAACTCTCCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 72 bp | TACCGGGTAGCAGAAAAGAACGGGAGCCTGCCTGCCTaGCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: YRVAEKNGSLPA*LPACLPALEQT Trigger: AGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCCGTTCTTTTCTGCTACCCGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CAA 90 bp | GCTCCTGCAGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAGCCTGCCTGCCTGCCTaGGAGCAGACTCTAAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: APAGRGHTPLHALESLAGACLPA*EQTLKS Trigger: GCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGC...TCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR TCA 72 bp | AGCAGACCGGAGCCTTGTCAGCTTTCCTGCCTTGTGTaGGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGA | + |
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Preference number: 3 (lower is better) Translates to: SRPEPCQLSCLV*VGAWDQGMCWR Trigger: TCGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGACAAGGCTCCGGTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 72 bp | GACCGGAGCCTTGTCAGCTTTCCTGCCTTGTGTGAGTaGGTGCCTGGGATCAGGGGATGTGCTGGCGATGAG | + |
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Preference number: 3 (lower is better) Translates to: DRSLVSFPALCE*VPGIRGCAGDE Trigger: CTCATCGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGACAAGGCTCCGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 72 bp | AGCAGAAAAGAACGGGAGCCTGCCTGCCTGCCTGCCTaGCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: SRKEREPACLPA*LPACLGADSKK Trigger: CTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCCGTTCTTTTCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 72 bp | AGGATGCAGACCAAGGGGATGAGAAGTGCTGACATCTaGAGGCTCCTGGCCCTCCTCACCTGTGAGGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: RMQTKGMRSADI*RLLALLTCEVE Trigger: CTCCACCTCACAGGTGAGGAGGGCCAGGAGCCTGCAGATGTCAGCACTTCTCATCCCCTTGGTCTGCATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 72 bp | GCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTaGCTGGAATCCCTTCCTGTACCTAAGGGCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: AEATLPCMHWNP*LESLPVPKGTG Trigger: GCCAGTGCCCTTAGGTACAGGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR TCA 72 bp | AGGAGAGGAAAGGGGAAAGGATGCAGACCAAGGGGATaGGAAGTGCTGACATCTGCAGGCTCCTGGCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: RRGKGKGCRPRG*EVLTSAGSWPS Trigger: GGAGGGCCAGGAGCCTGCAGATGTCAGCACTTCTCATCCCCTTGGTCTGCATCCTTTCCCCTTTCCTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR GCA 72 bp | GGGATCAGGGGATGTGCTGGCGATGAGGTCTGTGTCTaGAGTTCCCTGGGTCCCTCAGAGAAGATGCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GIRGCAGDEVCV*SSLGPSEKMQQ Trigger: TTGCTGCATCTTCTCTGAGGGACCCAGGGAACTGCAGACACAGACCTCATCGCCAGCACATCCCCTGATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 72 bp | CTCCTGCAGGCAGAGGCCACACTCCCCTGCATGCACTaGAATCCTTGGCTGGAATCCCTTCCTGTACCTAAG | + |
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Preference number: 3 (lower is better) Translates to: LLQAEATLPCMH*NPWLESLPVPK Trigger: CTTAGGTACAGGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CAA 90 bp | GGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCATCTTGTGGTTGTGTTaGGCACCTGGTCCTGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: GRGHTPLHALESLAGIPSILWLC*APGPGY Trigger: ATAGCCAGGACCAGGTGCCAAACACAACCACAAGAT...GGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CAA 90 bp | GCTCCTGCAGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAGAAACAATCTTGTGGTaGTGTTTGGCACCTGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: APAGRGHTPLHALESLAGETILW*CLAPGP Trigger: AGGACCAGGTGCCAAACACAACCACAAGATTGTTTC...TCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR TCA 72 bp | GATCATGTTTCCTTCTGCTGCCACTGCAGTGGCTTGTaGCAGTCAGGAAGGTGGTGGAGGCTCCTGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: DHVSFCCHCSGL*QSGRWWRLLQA Trigger: TGCCTGCAGGAGCCTCCACCACCTTCCTGACTGTCACAAGCCACTGCAGTGGCAGCAGAAGGAAACATGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 72 bp | GATGTGCTGGCGATGAGGTCTGTGTCTGCAGTTCCCTaGGTCCCTCAGAGAAGATGCAGCAATGCCATGCTC | + |
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Preference number: 3 (lower is better) Translates to: DVLAMRSVSAVP*VPQRRCSNAML Trigger: GAGCATGGCATTGCTGCATCTTCTCTGAGGGACCCAGGGAACTGCAGACACAGACCTCATCGCCAGCACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR CCA 72 bp | TGGCTGGAATCCCTTCCTGTACCTAAGGGCACTGGCTaGATTGGGTACCGGGTAGCAGAAAAGAACGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: WLESLPVPKGTG*IGYRVAEKNGS Trigger: GCTCCCGTTCTTTTCTGCTACCCGGTACCCAATCCAGCCAGTGCCCTTAGGTACAGGAAGGGATTCCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| 3UTR-3UTR CAA 90 bp | TTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGATGAGGTCTGTGTCGTCCTACTTCTCCCTTaGGCTTCTGAAGTGGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: LCEWVPGIRGCAGDEVCVVLLLP*ASEVDL Trigger: CAAGTCCACTTCAGAAGCCAAAGGGAGAAGTAGGAC...GACACAGACCTCATCGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR TCA 72 bp | CTCCTGGCCCTCCTCACCTGTGAGGTGGAGGCTAGATaGCCAGTGGCTAAAATGGGAAGAAGTAGGTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLALLTCEVEAR*PVAKMGRSRWK Trigger: CTTCCACCTACTTCTTCCCATTTTAGCCACTGGTCATCTAGCCTCCACCTCACAGGTGAGGAGGGCCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR CCA 72 bp | GGCACCTGGTCCTGGCTATTAGAGGATATACAGACATaGAGAGCAGACCGGAGCCTTGTCAGCTTTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GTWSWLLEDIQT*RADRSLVSFPA Trigger: GGCAGGAAAGCTGACAAGGCTCCGGTCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR CCA 72 bp | TTCCAGAGATCATGTTTCCTTCTGCTGCCACTGCAGTaGCTTGTGACAGTCAGGAAGGTGGTGGAGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FQRSCFLLLPLQ*LVTVRKVVEAP Trigger: AGGAGCCTCCACCACCTTCCTGACTGTCACAAGCCACTGCAGTGGCAGCAGAAGGAAACATGATCTCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR TCA 72 bp | GCCTGGAATACACAACACTGGGAACCGCGGACAATGTaGAATAGGAGAGTTCTGTGTAGGAATCCCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AWNTQHWEPRTM*NRRVLCRNPSK Trigger: TTTGGAGGGATTCCTACACAGAACTCTCCTATTTCACATTGTCCGCGGTTCCCAGTGTTGTGTATTCCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR GCA 72 bp | CTGCCTGCCTTGGAGCAGACTCTAAAAAGCTGGAGATaGTTCTCAGCTCCACTTCTGAAACAATCTTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPALEQTLKSWR*FSAPLLKQSCG Trigger: ACCACAAGATTGTTTCAGAAGTGGAGCTGAGAAGCATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR GCA 72 bp | TTCTGTGTAGGAATCCCTCCAAAGATAGCAGCATCTTaGCTTCTTTGTCTCAACAGAGGAGAGGAAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FCVGIPPKIAAS*LLCLNRGEERG Trigger: TCCCCTTTCCTCTCCTCTGTTGAGACAAAGAAGGCAAGATGCTGCTATCTTTGGAGGGATTCCTACACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | GGGAGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAGACAGCCTGAGCTCCTaGAGCCGTACCAGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLPACLPACLPALEQTLDSLSS*SRTRGL Trigger: CAGCCCCCTGGTACGGCTCCAGGAGCTCAGGCTGTC...TAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | GGGAGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAGGCCAGGCACTGTGCTaGGGTTGCAACGTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLPACLPACLPALEQTLGQALC*GCNVPE Trigger: CTCTGGAACGTTGCAACCTCAGCACAGTGCCTGGCC...TAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | GGGAGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTATCATCCAGGAAACAGTaGGGGCTGGGTCCCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLPACLPACLPALEQTLSSRKQ*GLGPHL Trigger: GAGATGGGGACCCAGCCCCCACTGTTTCCTGGATGA...TAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCGGTGAGGCAAGCTCCTaGCAGCCTGAGCTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPACLPACLPALEQTLKSGEASS*QPELLE Trigger: CTCCAGGAGCTCAGGCTGTCAGGAGCTTGCCTCACC...GCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCATGCCCGCCCTCCTCTaGAATGACCCAACGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPACLPACLPALEQTLKSMPALL*NDPTRP Trigger: GGGCCTCGTTGGGTCATTGCAGAGGAGGGCGGGCAT...GCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | GGGGATGTGCTGGCGATGAGGTCTGTGTCTGCAGTTCCCTGGGTCCCTCAGAGACTTTGGAGCAGTGGCTaGGTCCATCCCCTGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GDVLAMRSVSAVPWVPQRLWSSG*VHPLRP Trigger: CGGCCTCAGGGGATGGACGCAGCCACTGCTCCAAAG...TCTCTGAGGGACCCAGGGAACTGCAGACACAGACCTCATCGCCAGCACATCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCCCGGGTCTGGGAGGTaGAGTCACACACAGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQRPHSPACTGILGWNPFPGSGR*SHTQWG Trigger: GCCCCACTGTGTGTGACTGCACCTCCCAGACCCGGG...GAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | GGGGATGTGCTGGCGATGAGGTCTGTGTCTGCAGTTCCCTGGGTCCCTCAGAGAGAGCAGCGATTGAGGTaGGGCAAGCTCCTGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDVLAMRSVSAVPWVPQREQRLR*GKLLTA Trigger: GGCTGTCAGGAGCTTGCCTCACCTCAATCGCTGCTC...TCTCTGAGGGACCCAGGGAACTGCAGACACAGACCTCATCGCCAGCACATCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCAAGTCATGTGGTGCTTaGCCCGGCCCTTGCCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPACLPACLPALEQTLKSKSCGA*PGPCPY Trigger: GTAAGGGCAAGGGCCGGGTCAAGCACCACATGACTT...GCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCTCCAGTCGGGAGAGCATaGCACGCTGAAGCCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AEATLPCMHWNPWLESLPPVGRA*HAEAPT Trigger: TGTGGGGGCTTCAGCGTGGCATGCTCTCCCGACTGG...AGGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCTTCCCTTGGACATGTTaGGGGCCAGCACAAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPACLPACLPALEQTLKSFPWTC*GPAQAG Trigger: CCCTGCTTGTGCTGGCCCCCAACATGTCCAAGGGAA...GCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGCTTTCCCTTTGCCAAGCATGCCTGGAATACACAACACTGGGAACCGCGAGAGCATGCCACGCTaGAGCCCCCACAGGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLAFPLPSMPGIHNTGNRESMPR*SPHRRF Trigger: GAACCGCCTGTGGGGGCTTCAGCGTGGCATGCTCTC...GCGGTTCCCAGTGTTGTGTATTCCAGGCATGCTTGGCAAAGGGAAAGCCAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | CCCTGGGTCCCTCAGAGAAGATGCAGCAATGCCATGCTCAGACTAGAGCAGCAACGCCCTCCTCTGCAATaGCCCAACGAGGCCCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: PWVPQRRCSNAMLRLEQQRPPLQ*PNEAPT Trigger: AGTCGGGGCCTCGTTGGGTCATTGCAGAGGAGGGCG...TTGCTGCTCTAGTCTGAGCATGGCATTGCTGCATCTTCTCTGAGGGACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCTCCAGTTCTTGGAGCTaGCCCAGTCGGGAGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GRGHTPLHALESLAGIPSSSSWS*PSRESM Trigger: CATGCTCTCCCGACTGGGCCAGCTCCAAGAACTGGA...GGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | GCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCTGCCAACCAGGCTCCCTaGATCCAGAGCCTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEATLPCMHWNPWLESLPANQAP*IQSLQR Trigger: TCTCTGGAGGCTCTGGATCCAGGGAGCCTGGTTGGC...AGGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR CAA 72 bp | TGGAGAGCAGACCGGAGCCTTGTCAGCTTTCCTGCCTaGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WRADRSLVSFPA*CEWVPGIRGCA Trigger: AGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGACAAGGCTCCGGTCTGCTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR CAA 72 bp | AGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTaGGAGCAGACTCTAAAAAGCTGGAGATGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPACLPACLPA*EQTLKSWRCFS Trigger: TGAGAAGCATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | GCTCCTGCAGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAAGAAAGAGGACAATCTaGTTGAGGCGGAGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: APAGRGHTPLHALESLAGRKRTI*LRRRSS Trigger: GCTGGACCTCCGCCTCAATCAGATTGTCCTCTTTCT...TCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | TCAGCTTTCCTGCCTTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGTGCTTGGAAGGGTACTaGGCTCAGATTGCAGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAFLPCVSGCLGSGDVLACLEGY*AQIAAG Trigger: ACCCGCTGCAATCTGAGCTCAGTACCCTTCCAAGCA...CGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | GCTCCTGCAGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGATCCCAGCGACATTACTaGCTACACAGACATAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: APAGRGHTPLHALESLAGSQRHY*LHRHRP Trigger: GGGCCTATGTCTGTGTAGTCAGTAATGTCGCTGGGA...TCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCTGCAGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCCAGGAGAAAACAGCATaGCCGCCCTCCTCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GRGHTPLHALESLAGIPSQEKTA*PPSSAM Trigger: CATTGCAGAGGAGGGCGGGCATGCTGTTTTCTCCTG...GGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCAATACTGCCCGGGTCTaGGAGGTGCAGTCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: GRGHTPLHALESLAGIPSNTARV*EVQSHT Trigger: TGTGTGTGACTGCACCTCCCAGACCCGGGCAGTATT...GGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGAGCTGCGTCCATCCCCTaGGGCCGGAGAAGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVWHLVLAIRGYTDMESRAASIP*GRRSWG Trigger: CCCCCAGCTTCTCCGGCCTCAGGGGATGGACGCAGC...TCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCAAAGCTGGTTGTAGCTaGGGTCCAGTTCTTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPACLPACLPALEQTLKSKAGCS*GPVLGA Trigger: AGCTCCAAGAACTGGACCTCAGCTACAACCAGCTTT...GCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCCTAGAGGACAATCTGATTaGGGCGGAGGTCCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEATLPCMHWNPWLESLPRGQSD*GGGPAV Trigger: CACTGCTGGACCTCCGCCTCAATCAGATTGTCCTCT...AGGAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | AGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCAAAGCAGAGGGTCACTaGGGTGAGGAAGGGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQRPHSPACTGILGWNPFKAEGH*GEEGEE Trigger: TTCCTCCCCTTCCTCACCTCAGTGACCCTCTGCTTT...GAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | TCAGCTTTCCTGCCTTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGTGGGGTCAGACAGAGTaGCATTTGGTGGCTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SAFLPCVSGCLGSGDVLAWGQTE*HLVAQL Trigger: AAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCA...CGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGCTTTCCCTTTGCCAAGCATGCCTGGAATACACAACACTGGGAACCGCAAGGAGTGGGGACCATaGGAGCCAGGCTTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLAFPLPSMPGIHNTGNRKEWGP*EPGLLW Trigger: CCAAAGCAAGCCTGGCTCCCATGGTCCCCACTCCTT...GCGGTTCCCAGTGTTGTGTATTCCAGGCATGCTTGGCAAAGGGAAAGCCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | TCAGAGACCTTAGTCCTACTTCTCCCTTTGGCTTCTGAAGTGGACTTGGGTGGTGGAGGTCCAGCAGTGTaGGGGCAGTCAGGCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SETLVLLLPLASEVDLGGGGPAV*GQSGLR Trigger: TCTCAGGCCTGACTGCCCTCACACTGCTGGACCTCC...ACCACCCAAGTCCACTTCAGAAGCCAAAGGGAGAAGTAGGACTAAGGTCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TCAGAGACCTTAGTCCTACTTCTCCCTTTGGCTTCTGAAGTGGACTTGGGTGGTACTAGTGCTGGGAGCTaGGCAAGGGCTAGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SETLVLLLPLASEVDLGGTSAGS*ARARPG Trigger: GCCTGGCCTAGCCCTTGCCCAGCTCCCAGCACTAGT...ACCACCCAAGTCCACTTCAGAAGCCAAAGGGAGAAGTAGGACTAAGGTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGGCCACACTCCCCTGCATGCACTGGAATCCTTGGCTGGAATCCCTTCGGTTTGCAAGTGAAGTaGCCTGGAGGCAGAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQRPHSPACTGILGWNPFGLQVK*PGGRMS Trigger: AGACATTCTGCCTCCAGGCCACTTCACTTGCAAACC...GAAGGGATTCCAGCCAAGGATTCCAGTGCATGCAGGGGAGTGTGGCCTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | CTGGCTATTAGAGGATATACAGACATGGAGAGCAGACCGGAGCCTTGTCAGCTTGAGGGCAGTCAGGCCTaGGAATATCCCAGGACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAIRGYTDMESRPEPCQLEGSQA*EYPRTH Trigger: GTGGGTCCTGGGATATTCTCAGGCCTGACTGCCCTC...AAGCTGACAAGGCTCCGGTCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGTCCCTCAGAGAAGATGCAGCAATGCCATGCTCAGACTAGAGCAGCAAGCCACAAACACCAGGTaGTTATCTCCAACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWVPQRRCSNAMLRLEQQATNTR*LSPTSS Trigger: GCTGGAGGTTGGAGATAACCACCTGGTGTTTGTGGC...TTGCTGCTCTAGTCTGAGCATGGCATTGCTGCATCTTCTCTGAGGGACCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCTGGAGATGCTTCTCAGCTCCAGCTACATCCAGCAAGTaGAAGGCAGTCAAGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPALEQTLKSWRCFSAPATSSK*KAVKPW Trigger: CCACGGCTTGACTGCCTTCCACTTGCTGGATGTAGC...TGGAGCTGAGAAGCATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTTCCTGCCTTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGTTTGGTGGCTCAACTTaGATAACTTCCAGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAFLPCVSGCLGSGDVLAFGGST*ITSSQV Trigger: AACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAA...CGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | CTGGCTATTAGAGGATATACAGACATGGAGAGCAGACCGGAGCCTTGTCAGCTTGGGCTGGTTTGCAAGTaGAGTGGCCTGGAGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAIRGYTDMESRPEPCQLGLVCK*SGLEAE Trigger: TTCTGCCTCCAGGCCACTTCACTTGCAAACCAGCCC...AAGCTGACAAGGCTCCGGTCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | TGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCTGGAGATGCTTCTCAGCTCCATCTCCAACCTCCAGCTaGTGGAGACTACCTAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPALEQTLKSWRCFSAPSPTSS*WRLPSS Trigger: TGAGCTAGGTAGTCTCCAGCAGCTGGAGGTTGGAGA...TGGAGCTGAGAAGCATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGATAGCAGCATCTTGCCTTCTTTGTCTCAACAGAGGAGAGGAAAGGGGGGGGTGGCATCAAGTTaGGCGCTGCATCTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDSSILPSLSQQRRGKGGVASS*ALHLSR Trigger: CCTGGAGAGATGCAGCGCCCAACTTGATGCCACCCC...CCCCTTTCCTCTCCTCTGTTGAGACAAAGAAGGCAAGATGCTGCTATCTTTGGA 53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGATAGCAGCATCTTGCCTTCTTTGTCTCAACAGAGGAGAGGAAAGGGGCTGAGGTCCAGTTCTTaGAGCTGGCCCAGTCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKDSSILPSLSQQRRGKGLRSSS*SWPSRE Trigger: CTCCCGACTGGGCCAGCTCCAAGAACTGGACCTCAG...CCCCTTTCCTCTCCTCTGTTGAGACAAAGAAGGCAAGATGCTGCTATCTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCTGGAGATGCTTCTCAGCTCCATCCAGAGATGGCCAGTaGTGGATCTCCAGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLPALEQTLKSWRCFSAPSRDGQ*WISSSF Trigger: AAAGGAGCTGGAGATCCACCACTGGCCATCTCTGGA...TGGAGCTGAGAAGCATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGAGGAAACAGTGGGGGCTaGGTCCCCATCTCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CVWHLVLAIRGYTDMESRGNSGG*VPISRA Trigger: TGCTCTGGAGATGGGGACCCAGCCCCCACTGTTTCC...TCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGATGAGGTCTGTGTCCAGAGTGCCATTTGGTaGCTCAACTTGGATAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCEWVPGIRGCAGDEVCVQSAIW*LNLDNF Trigger: GAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTG...GACACAGACCTCATCGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | GTAAATGAAGTTCCAGAGATCATGTTTCCTTCTGCTGCCACTGCAGTGGCTTGTAAGCTCCTGACAGCCTaGGCTCCTGGAGCCGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: VNEVPEIMFPSAATAVACKLLTA*APGAVP Trigger: TGGTACGGCTCCAGGAGCTCAGGCTGTCAGGAGCTT...ACAAGCCACTGCAGTGGCAGCAGAAGGAAACATGATCTCTGGAACTTCATTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGACAGAGCCTCCAGAGATaGCCAGTGGTGGATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVWHLVLAIRGYTDMESRQSLQR*PVVDLQ Trigger: CTGGAGATCCACCACTGGCCATCTCTGGAGGCTCTG...TCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TCAGAGACCTTAGTCCTACTTCTCCCTTTGGCTTCTGAAGTGGACTTGGGTGGTCTTAGGCTCTTCCCTTaGACATGTTGGGGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SETLVLLLPLASEVDLGGLRLFP*TCWGPA Trigger: TGCTGGCCCCCAACATGTCCAAGGGAAGAGCCTAAG...ACCACCCAAGTCCACTTCAGAAGCCAAAGGGAGAAGTAGGACTAAGGTCTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCTGGAGATGCTTCTCAGCTCCACAGAAAGAAAGGCCCTaGGATCCCTGGCATAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CLPALEQTLKSWRCFSAPQKERP*DPWHSD Trigger: ATCACTATGCCAGGGATCCCAGGGCCTTTCTTTCTG...TGGAGCTGAGAAGCATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | TGCCTGCCTGCCTTGGAGCAGACTCTAAAAAGCTGGAGATGCTTCTCAGCTCCAGCTGAGATAGGATTCTaGGATAGATCCAAGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPALEQTLKSWRCFSAPAEIGF*DRSKIR Trigger: CCGGATCTTGGATCTATCTCAGAATCCTATCTCAGC...TGGAGCTGAGAAGCATCTCCAGCTTTTTAGAGTCTGCTCCAAGGCAGGCAGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | TGTGGTTGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGCTCAGTCGATTGCCCTaGAGCCTCAGGGTGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGCVWHLVLAIRGYTDMELSRLP*SLRVSR Trigger: TCTACTCACCCTGAGGCTGCAGGGCAATCGACTGAG...CTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACAACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR TCA 90 bp | TCAGAGACCTTAGTCCTACTTCTCCCTTTGGCTTCTGAAGTGGACTTGGGTGGTAGAATAACTTGGCAGTaGCCCGATTACCCCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SETLVLLLPLASEVDLGGRITWQ*PDYPQS Trigger: ACTCTGGGGGTAATCGGGTCACTGCCAAGTTATTCT...ACCACCCAAGTCCACTTCAGAAGCCAAAGGGAGAAGTAGGACTAAGGTCTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR GCA 90 bp | GGTTGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGGAAGCTCAAGTGGTaGAGTGCTTGGAAGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GCVWHLVLAIRGYTDMESRKLKW*SAWKGT Trigger: AGTACCCTTCCAAGCACTGCACCACTTGAGCTTCCT...GCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGACCAACCTCCAGCTGCTaGAGACTACCTAGCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: CVWHLVLAIRGYTDMESRPTSSC*RLPSSL Trigger: TAGTGAGCTAGGTAGTCTCCAGCAGCTGGAGGTTGG...TCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGTAAATGAAGTTCCAGAGATCATGTTTCCTTCTGCTGCCACTGCAGTGCGGAGGAAGCTCAAGTaGTGCAGTGCTTGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VEVNEVPEIMFPSAATAVRRKLK*CSAWKG Trigger: ACCCTTCCAAGCACTGCACCACTTGAGCTTCCTCCG...CACTGCAGTGGCAGCAGAAGGAAACATGATCTCTGGAACTTCATTTACTTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGATAGCAGCATCTTGCCTTCTTTGTCTCAACAGAGGAGAGGAAAGGGGCTTTCGGATCAGGGCTaGTTTGCAAGTGAAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKDSSILPSLSQQRRGKGLSDQG*FASEVA Trigger: GGCCACTTCACTTGCAAACCAGCCCTGATCCGAAAG...CCCCTTTCCTCTCCTCTGTTGAGACAAAGAAGGCAAGATGCTGCTATCTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGAAAGTGGTGCAGTGCTTaGAAGGGTACTGAGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVWHLVLAIRGYTDMESRKWCSA*KGTELR Trigger: TCTGAGCTCAGTACCCTTCCAAGCACTGCACCACTT...TCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| 3UTR CAA 72 bp | GTTCTGTGTAGGAATCCCTCCAAAGATAGCAGCATCTaGCCTTCTTTGTCTCAACAGAGGAGAGGAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCRNPSKDSSI*PSLSQQRRGKG Trigger: CCCCTTTCCTCTCCTCTGTTGAGACAAAGAAGGCAAGATGCTGCTATCTTTGGAGGGATTCCTACACAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCTTTGGCTTCTGAAGTGGACTTGGGTGGTCTTTAGCATGGATGGAAAAAAATCAAAAGTCATGTaGTGCTTGACCCGGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLWLLKWTWVVFSMDGKKSKVM*CLTRPL Trigger: CAAGGGCCGGGTCAAGCACCACATGACTTTTGATTT...TTTTCCATCCATGCTAAAGACCACCCAAGTCCACTTCAGAAGCCAAAGGGAGAA 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | GGGAGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTTGGAGCAGACTCTACCATGGGAGCCAGGCTaGCTTTGGAGCAGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLPACLPACLPALEQTLPWEPG*LWSSGC Trigger: GCAGCCACTGCTCCAAAGCAAGCCTGGCTCCCATGG...TAGAGTCTGCTCCAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | GCGGGTGATAGCCAGGCTGCTCAGGTTGAGGCCAACCAGGCTCCCTaGATCCAGAGCCTCCAGAGATGGCCAGTGGTGGATCTCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGDSQAAQVEANQAP*IQSLQRWPVVDLQL Trigger: GAGCTGGAGATCCACCACTGGCCATCTCTGGAGGCTCTGGATCCAGGGAGCCTGGTTGGCCTCAACCTGAGCAGCCTGGCTATCACCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTTCCTGCCTTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGGCCAGGCTGCTCAGGTaGAGGCCAACCAGGCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAFLPCVSGCLGSGDVLAARLLR*RPTRLP Trigger: AGGGAGCCTGGTTGGCCTCAACCTGAGCAGCCTGGC...CGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | GCAGCTACTGATGCTCCCTCCAGGCAGGAGGAGCAGGAAAAGGAGTaGGGACCATGGGAGCCAGGCTTGCTTTGGAGCAGTGGCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AATDAPSRQEEQEKE*GPWEPGLLWSSGCV Trigger: GACGCAGCCACTGCTCCAAAGCAAGCCTGGCTCCCATGGTCCCCACTCCTTTTCCTGCTCCTCCTGCCTGGAGGGAGCATCAGTAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | CCAACCAGGCTCCCTGGATCCAGAGCCTCCAGAGATGGCCAGTGGTaGATCTCCAGCTCCTTTAGCTGCCCTAGCCCTCGAAGTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTRLPGSRASRDGQW*ISSSFSCPSPRSAP Trigger: TGGGGCACTTCGAGGGCTAGGGCAGCTAAAGGAGCTGGAGATCCACCACTGGCCATCTCTGGAGGCTCTGGATCCAGGGAGCCTGGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTTCCTGCCTTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGTTACCCCCAGAGTTCTaGTCCCCCGAGGGCCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAFLPCVSGCLGSGDVLALPPEF*SPEGRG Trigger: ACCTCGGCCCTCGGGGGACAAGAACTCTGGGGGTAA...CGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAAGGCAGGAAAGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS TCA 90 bp | AGGTCCAGTTCTTGGAGCTGGCCCAGTCGGGAGAGCATGCCACGCTaGAGCCCCCACAGGCGGTTCCCACTCAAATCCAGGAGTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSSSWSWPSRESMPR*SPHRRFPLKSRSSV Trigger: CACAGAACTCCTGGATTTGAGTGGGAACCGCCTGTGGGGGCTTCAGCGTGGCATGCTCTCCCGACTGGGCCAGCTCCAAGAACTGGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS GCA 90 bp | AAGCCCTCCGGGAATAGTGTCCAGTCGCCTGTGGGCACAGAATACTaGCCGGGTCTGGGAGGTGCAGTCACACACAGTGGGGCAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: KPSGNSVQSPVGTEY*PGLGGAVTHSGAAT Trigger: AGTAGCTGCCCCACTGTGTGTGACTGCACCTCCCAGACCCGGGCAGTATTCTGTGCCCACAGGCGACTGGACACTATTCCCGGAGGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | TTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGATGAGGTCTGTGTCGGGGGTGGCATCAAGTaGGGCGCTGCATCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCEWVPGIRGCAGDEVCVGGGIK*GAASLQ Trigger: CTGGAGAGATGCAGCGCCCAACTTGATGCCACCCCC...GACACAGACCTCATCGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | GGAATAGTGTCCAGTCGCCTGTGGGCACAGAATACTGCCCGGGTCTaGGAGGTGCAGTCACACACAGTGGGGCAGCTACTGATGCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GIVSSRLWAQNTARV*EVQSHTVGQLLMLP Trigger: AGGGAGCATCAGTAGCTGCCCCACTGTGTGTGACTGCACCTCCCAGACCCGGGCAGTATTCTGTGCCCACAGGCGACTGGACACTATTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | TCTGTGTCCAGTGGAAGCCCTCCGGGAATAGTGTCCAGTCGCCTGTaGGCACAGAATACTGCCCGGGTCTGGGAGGTGCAGTCACACACA | + |
|
Preference number: 5 (lower is better) Translates to: SVSSGSPPGIVSSRL*AQNTARVWEVQSHT Trigger: TGTGTGTGACTGCACCTCCCAGACCCGGGCAGTATTCTGTGCCCACAGGCGACTGGACACTATTCCCGGAGGGCTTCCACTGGACACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | CCCCCACAGGCGGTTCCCACTCAAATCCAGGAGTTCTGTGTCCAGTaGAAGCCCTCCGGGAATAGTGTCCAGTCGCCTGTGGGCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPQAVPTQIQEFCVQ*KPSGNSVQSPVGTE Trigger: TTCTGTGCCCACAGGCGACTGGACACTATTCCCGGAGGGCTTCCACTGGACACAGAACTCCTGGATTTGAGTGGGAACCGCCTGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS TCA 90 bp | CATCTCCAGAGCAGGAGAAAACAGCATGCCCGCCCTCCTCTGCAATaGCCCAACGAGGCCCCGACTTTCGGATCAGGGCTGGTTTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLQSRRKQHARPPLQ*PNEAPTFGSGLVCK Trigger: CTTGCAAACCAGCCCTGATCCGAAAGTCGGGGCCTCGTTGGGTCATTGCAGAGGAGGGCGGGCATGCTGTTTTCTCCTGCTCTGGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS GCA 90 bp | AGAGCCTCCAGAGATGGCCAGTGGTGGATCTCCAGCTCCTTTAGCTaGCCTAGCCCTCGAAGTGCCCCAGCTGGTAGCCTCTCAATATCC | + |
|
Preference number: 5 (lower is better) Translates to: RASRDGQWWISSSFS*PSPRSAPAGSLSIS Trigger: GGATATTGAGAGGCTACCAGCTGGGGCACTTCGAGGGCTAGGGCAGCTAAAGGAGCTGGAGATCCACCACTGGCCATCTCTGGAGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | TTGTGTGAGTGGGTGCCTGGGATCAGGGGATGTGCTGGCGATGAGGTCTGTGTCCGGATCAGGGCTGGTTaGCAAGTGAAGTGGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCEWVPGIRGCAGDEVCVRIRAG*QVKWPG Trigger: TCCAGGCCACTTCACTTGCAAACCAGCCCTGATCCG...GACACAGACCTCATCGCCAGCACATCCCCTGATCCCAGGCACCCACTCACACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS TCA 90 bp | TCTGCTACATCCAGCAAGTGGAAGGCAGTCAAGCCGTGGAAGGCATaGGCAGCGATTGAGGTGAGGCAAGCTCCTGACAGCCTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SATSSKWKAVKPWKA*AAIEVRQAPDSLSS Trigger: GGAGCTCAGGCTGTCAGGAGCTTGCCTCACCTCAATCGCTGCTCATGCCTTCCACGGCTTGACTGCCTTCCACTTGCTGGATGTAGCAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS TCA 90 bp | CAAGATCCGGAGGAAGCTCAAGTGGTGCAGTGCTTGGAAGGGTACTaGGCTCAGATTGCAGCGGGTGATAGCCAGGCTGCTCAGGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QDPEEAQVVQCLEGY*AQIAAGDSQAAQVE Trigger: CTCAACCTGAGCAGCCTGGCTATCACCCGCTGCAATCTGAGCTCAGTACCCTTCCAAGCACTGCACCACTTGAGCTTCCTCCGGATCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | AACTTGGCCAGCCCTGCAAAAGCCCCCGGAGCCACAAACACCAGGTaGTTATCTCCAACCTCCAGCTGCTGGAGACTACCTAGCTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: NLASPAKAPGATNTR*LSPTSSCWRLPSSL Trigger: TAGTGAGCTAGGTAGTCTCCAGCAGCTGGAGGTTGGAGATAACCACCTGGTGTTTGTGGCTCCGGGGGCTTTTGCAGGGCTGGCCAAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGCTTTCCCTTTGCCAAGCATGCCTGGAATACACAACACTGGGAACCGCTGCTTGACCCGGCCCTaGCCCTTACTCCAAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLAFPLPSMPGIHNTGNRCLTRP*PLLQRA Trigger: TGCTCTTTGGAGTAAGGGCAAGGGCCGGGTCAAGCA...GCGGTTCCCAGTGTTGTGTATTCCAGGCATGCTTGGCAAAGGGAAAGCCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS TCA 90 bp | ACCAGGGGGCTGAGCCTTCGAGCTGGGATGGCTGAGATAGGATTCTaGGATAGATCCAAGATCCGGAGGAAGCTCAAGTGGTGCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TRGLSLRAGMAEIGF*DRSKIRRKLKWCSA Trigger: AGCACTGCACCACTTGAGCTTCCTCCGGATCTTGGATCTATCTCAGAATCCTATCTCAGCCATCCCAGCTCGAAGGCTCAGCCCCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS GCA 90 bp | GCCCCCGGAGCCACAAACACCAGGTGGTTATCTCCAACCTCCAGCTaGTGGAGACTACCTAGCTCACTAAAGGCTCCATCTAGAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APGATNTRWLSPTSS*WRLPSSLKAPSRKR Trigger: CCTCTTTCTAGATGGAGCCTTTAGTGAGCTAGGTAGTCTCCAGCAGCTGGAGGTTGGAGATAACCACCTGGTGTTTGTGGCTCCGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | TCAATATCCAGTTCTCGAAGCCTAAGAGCTACTAGTGCTGGGAGCTaGGCAAGGGCTAGGCCAGGCACTGTGCTGAGGTTGCAACGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SISSSRSLRATSAGS*ARARPGTVLRLQRS Trigger: GGAACGTTGCAACCTCAGCACAGTGCCTGGCCTAGCCCTTGCCCAGCTCCCAGCACTAGTAGCTCTTAGGCTTCGAGAACTGGATATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | CAACGAGGCCCCGACTTTCGGATCAGGGCTGGTTTGCAAGTGAAGTaGCCTGGAGGCAGAATGTCTGAAAACTCCCTTAGGCTCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QRGPDFRIRAGLQVK*PGGRMSENSLRLFP Trigger: AGGGAAGAGCCTAAGGGAGTTTTCAGACATTCTGCCTCCAGGCCACTTCACTTGCAAACCAGCCCTGATCCGAAAGTCGGGGCCTCGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | CTGGCTATTAGAGGATATACAGACATGGAGAGCAGACCGGAGCCTTGTCAGCTTGCTGAGGTCCAGTTCTaGGAGCTGGCCCAGTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAIRGYTDMESRPEPCQLAEVQF*ELAQSG Trigger: TCCCGACTGGGCCAGCTCCAAGAACTGGACCTCAGC...AAGCTGACAAGGCTCCGGTCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS TCA 90 bp | GGAGGCGGCAATCACAGGTTAGGGGGTTACCAGACAGCCTCAGGGTaGCCAGTTTGTCTGGAGAAGGAAAGGCTGTTTCCTCTAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGGNHRLGGYQTASG*PVCLEKERLFPLES Trigger: AGACTCTAGAGGAAACAGCCTTTCCTTCTCCAGACAAACTGGTCACCCTGAGGCTGTCTGGTAACCCCCTAACCTGTGATTGCCGCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | CCCGGAGCCACAAACACCAGGTGGTTATCTCCAACCTCCAGCTGCTaGAGACTACCTAGCTCACTAAAGGCTCCATCTAGAAAGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PGATNTRWLSPTSSC*RLPSSLKAPSRKRT Trigger: TGTCCTCTTTCTAGATGGAGCCTTTAGTGAGCTAGGTAGTCTCCAGCAGCTGGAGGTTGGAGATAACCACCTGGTGTTTGTGGCTCCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | TGTGGTTGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGCTTCCCTTGGACATGTaGGGGGCCAGCACAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CGCVWHLVLAIRGYTDMELPLDM*GASTSR Trigger: CCTGCTTGTGCTGGCCCCCAACATGTCCAAGGGAAG...CTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACAACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS CCA 90 bp | TGGGATCCCTGGCATAGTGATGTTGGGGTCAGACAGAGTGCCATTTaGTGGCTCAACTTGGATAACTTCCAGCCAGGTTCTCAGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WDPWHSDVGVRQSAI*WLNLDNFQPGSQRV Trigger: GACTCTCTGAGAACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAACATCACTATGCCAGGGATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | TCAGAGACCTTAGTCCTACTTCTCCCTTTGGCTTCTGAAGTGGACTTGGGTGGTGGCACTGTGCTGAGGTaGCAACGTTCCAGAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SETLVLLLPLASEVDLGGGTVLR*QRSRVM Trigger: CATCACTCTGGAACGTTGCAACCTCAGCACAGTGCC...ACCACCCAAGTCCACTTCAGAAGCCAAAGGGAGAAGTAGGACTAAGGTCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGCTTTCCCTTTGCCAAGCATGCCTGGAATACACAACACTGGGAACCGCATTTGGTGGCTCAACTaGGATAACTTCCAGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLAFPLPSMPGIHNTGNRIWWLN*DNFQPG Trigger: ACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAAT...GCGGTTCCCAGTGTTGTGTATTCCAGGCATGCTTGGCAAAGGGAAAGCCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS-3UTR CAA 90 bp | GTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGACCCTGGCATAGTGATGTaGGGGTCAGACAGAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VFGTWSWLLEDIQTWRADPGIVM*GSDRVP Trigger: TGGCACTCTGTCTGACCCCAACATCACTATGCCAGG...GTCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS-3UTR CAA 90 bp | TGTGGTTGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGACAATTCTCAGTCGATaGCCCTGCAGCCTCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CGCVWHLVLAIRGYTDMETILSR*PCSLRV Trigger: CACCCTGAGGCTGCAGGGCAATCGACTGAGAATTGT...CTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACAACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 90 bp | ATAGTGATGTTGGGGTCAGACAGAGTGCCATTTGGTGGCTCAACTTaGATAACTTCCAGCCAGGTTCTCAGAGAGTCATTCCCAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: IVMLGSDRVPFGGST*ITSSQVLRESFPAT Trigger: TGTCGCTGGGAATGACTCTCTGAGAACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAACATCACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 90 bp | GATCCCTGGCATAGTGATGTTGGGGTCAGACAGAGTGCCATTTGGTaGCTCAACTTGGATAACTTCCAGCCAGGTTCTCAGAGAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: DPWHSDVGVRQSAIW*LNLDNFQPGSQRVI Trigger: AATGACTCTCTGAGAACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAACATCACTATGCCAGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS-3UTR CAA 90 bp | TGTGTTTGGCACCTGGTCCTGGCTATTAGAGGATATACAGACATGGAGAGCAGAGTGATGGTACTTAACTaGGCCAGCCCTGCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CVWHLVLAIRGYTDMESRVMVLN*ASPAKA Trigger: GGCTTTTGCAGGGCTGGCCAAGTTAAGTACCATCAC...TCTGCTCTCCATGTCTGTATATCCTCTAATAGCCAGGACCAGGTGCCAAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 90 bp | GTGACCAGTTTGTCTGGAGAAGGAAAGGCTGTTTCCTCTAGAGTCTaGAGAGCATTGTCTGCTACATCCAGCAAGTGGAAGGCAGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTSLSGEGKAVSSRV*RALSATSSKWKAVK Trigger: CTTGACTGCCTTCCACTTGCTGGATGTAGCAGACAATGCTCTTCAGACTCTAGAGGAAACAGCCTTTCCTTCTCCAGACAAACTGGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS-3UTR CAA 90 bp | TTCTCCCTTTGGCTTCTGAAGTGGACTTGGGTGGTCTTTAGCATGGATGGAAAACTCAGGGTGACCAGTTaGTCTGGAGAAGGAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSLWLLKWTWVVFSMDGKLRVTS*SGEGKA Trigger: AGCCTTTCCTTCTCCAGACAAACTGGTCACCCTGAG...TTTTCCATCCATGCTAAAGACCACCCAAGTCCACTTCAGAAGCCAAAGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS GCA 72 bp | GGTCCAGTTCTTGGAGCTGGCCCAGTCGGGAGAGCATaGCACGCTGAAGCCCCCACAGGCGGTTCCCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPVLGAGPVGRA*HAEAPTGGSHS Trigger: TGAGTGGGAACCGCCTGTGGGGGCTTCAGCGTGGCATGCTCTCCCGACTGGGCCAGCTCCAAGAACTGGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 72 bp | TCTTGGAGCTGGCCCAGTCGGGAGAGCATGCCACGCTaGAGCCCCCACAGGCGGTTCCCACTCAAATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWSWPSRESMPR*SPHRRFPLKSR Trigger: CCTGGATTTGAGTGGGAACCGCCTGTGGGGGCTTCAGCGTGGCATGCTCTCCCGACTGGGCCAGCTCCAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS GCA 72 bp | GCTGGGTCCCCATCTCCAGAGCAGGAGAAAACAGCATaGCCGCCCTCCTCTGCAATGACCCAACGAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGSPSPEQEKTA*PPSSAMTQRGP Trigger: GGGGCCTCGTTGGGTCATTGCAGAGGAGGGCGGGCATGCTGTTTTCTCCTGCTCTGGAGATGGGGACCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | ATTGAGGTGAGGCAAGCTCCTGACAGCCTGAGCTCCTaGAGCCGTACCAGGGGGCTGAGCCTTCGAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: IEVRQAPDSLSS*SRTRGLSLRAG Trigger: CCCAGCTCGAAGGCTCAGCCCCCTGGTACGGCTCCAGGAGCTCAGGCTGTCAGGAGCTTGCCTCACCTCAAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 90 bp | CCCAGGCTCAAGGGTGGAAAGCTGGTTGTAGCTGAGGTCCAGTTCTaGGAGCTGGCCCAGTCGGGAGAGCATGCCACGCTGAAGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRLKGGKLVVAEVQF*ELAQSGEHATLKPP Trigger: TGGGGGCTTCAGCGTGGCATGCTCTCCCGACTGGGCCAGCTCCAAGAACTGGACCTCAGCTACAACCAGCTTTCCACCCTTGAGCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | AGTGGAAGCCCTCCGGGAATAGTGTCCAGTCGCCTGTaGGCACAGAATACTGCCCGGGTCTGGGAGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGSPPGIVSSRL*AQNTARVWEVQ Trigger: CTGCACCTCCCAGACCCGGGCAGTATTCTGTGCCCACAGGCGACTGGACACTATTCCCGGAGGGCTTCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | AGCCAGGCTGCTCAGGTTGAGGCCAACCAGGCTCCCTaGATCCAGAGCCTCCAGAGATGGCCAGTGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SQAAQVEANQAP*IQSLQRWPVVD Trigger: ATCCACCACTGGCCATCTCTGGAGGCTCTGGATCCAGGGAGCCTGGTTGGCCTCAACCTGAGCAGCCTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 90 bp | GGTACTGAGCTCAGATTGCAGCGGGTGATAGCCAGGCTGCTCAGGTaGAGGCCAACCAGGCTCCCTGGATCCAGAGCCTCCAGAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTELRLQRVIARLLR*RPTRLPGSRASRDG Trigger: GCCATCTCTGGAGGCTCTGGATCCAGGGAGCCTGGTTGGCCTCAACCTGAGCAGCCTGGCTATCACCCGCTGCAATCTGAGCTCAGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 72 bp | AGCAGGAGAAAACAGCATGCCCGCCCTCCTCTGCAATaGCCCAACGAGGCCCCGACTTTCGGATCAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRRKQHARPPLQ*PNEAPTFGSGL Trigger: CAGCCCTGATCCGAAAGTCGGGGCCTCGTTGGGTCATTGCAGAGGAGGGCGGGCATGCTGTTTTCTCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS GCA 72 bp | GGGAATAGTGTCCAGTCGCCTGTGGGCACAGAATACTaGCCGGGTCTGGGAGGTGCAGTCACACACAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GNSVQSPVGTEY*PGLGGAVTHSG Trigger: CCCACTGTGTGTGACTGCACCTCCCAGACCCGGGCAGTATTCTGTGCCCACAGGCGACTGGACACTATTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS GCA 72 bp | AGAGATGGCCAGTGGTGGATCTCCAGCTCCTTTAGCTaGCCTAGCCCTCGAAGTGCCCCAGCTGGTAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RDGQWWISSSFS*PSPRSAPAGSL Trigger: GAGGCTACCAGCTGGGGCACTTCGAGGGCTAGGGCAGCTAAAGGAGCTGGAGATCCACCACTGGCCATCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 72 bp | TCTGGGAGGTGCAGTCACACACAGTGGGGCAGCTACTaGTGCTCCCTCCAGGCAGGAGGAGCAGGAAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGRCSHTQWGSY*CSLQAGGAGKG Trigger: TCCTTTTCCTGCTCCTCCTGCCTGGAGGGAGCATCAGTAGCTGCCCCACTGTGTGTGACTGCACCTCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS GCA 72 bp | TCCAGAGCAGGAGAAAACAGCATGCCCGCCCTCCTCTaGAATGACCCAACGAGGCCCCGACTTTCGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRAGENSMPALL*NDPTRPRLSDQ Trigger: CTGATCCGAAAGTCGGGGCCTCGTTGGGTCATTGCAGAGGAGGGCGGGCATGCTGTTTTCTCCTGCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 72 bp | AAGGGTGGAAAGCTGGTTGTAGCTGAGGTCCAGTTCTaGGAGCTGGCCCAGTCGGGAGAGCATGCCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KGGKLVVAEVQF*ELAQSGEHATL Trigger: CAGCGTGGCATGCTCTCCCGACTGGGCCAGCTCCAAGAACTGGACCTCAGCTACAACCAGCTTTCCACCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 90 bp | GGCACTGTGCTGAGGTTGCAACGTTCCAGAGTGATGGTACTTAACTaGGCCAGCCCTGCAAAAGCCCCCGGAGCCACAAACACCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTVLRLQRSRVMVLN*ASPAKAPGATNTRW Trigger: CCACCTGGTGTTTGTGGCTCCGGGGGCTTTTGCAGGGCTGGCCAAGTTAAGTACCATCACTCTGGAACGTTGCAACCTCAGCACAGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 72 bp | TCCAGCAAGTGGAAGGCAGTCAAGCCGTGGAAGGCATaGGCAGCGATTGAGGTGAGGCAAGCTCCTGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSKWKAVKPWKA*AAIEVRQAPDS Trigger: GCTGTCAGGAGCTTGCCTCACCTCAATCGCTGCTCATGCCTTCCACGGCTTGACTGCCTTCCACTTGCTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | AGCCCTGCAAAAGCCCCCGGAGCCACAAACACCAGGTaGTTATCTCCAACCTCCAGCTGCTGGAGACTACCT | + |
|
Preference number: 6 (lower is better) Translates to: SPAKAPGATNTR*LSPTSSCWRLP Trigger: AGGTAGTCTCCAGCAGCTGGAGGTTGGAGATAACCACCTGGTGTTTGTGGCTCCGGGGGCTTTTGCAGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 72 bp | GAGGAAGCTCAAGTGGTGCAGTGCTTGGAAGGGTACTaGGCTCAGATTGCAGCGGGTGATAGCCAGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EEAQVVQCLEGY*AQIAAGDSQAA Trigger: AGCAGCCTGGCTATCACCCGCTGCAATCTGAGCTCAGTACCCTTCCAAGCACTGCACCACTTGAGCTTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | AATGACCCAACGAGGCCCCGACTTTCGGATCAGGGCTaGTTTGCAAGTGAAGTGGCCTGGAGGCAGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: NDPTRPRLSDQG*FASEVAWRQNV Trigger: GACATTCTGCCTCCAGGCCACTTCACTTGCAAACCAGCCCTGATCCGAAAGTCGGGGCCTCGTTGGGTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | CATAGCCACACCCCTGCTGTCCAGAAAGAAAGGCCCTaGGATCCCTGGCATAGTGATGTTGGGGTCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: HSHTPAVQKERP*DPWHSDVGVRQ Trigger: CTGTCTGACCCCAACATCACTATGCCAGGGATCCCAGGGCCTTTCTTTCTGGACAGCAGGGGTGTGGCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | CCCGAGGGCCGAGGTGCCACAAAATCAAAAGTCATGTaGTGCTTGACCCGGCCCTTGCCCTTACTCCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PEGRGATKSKVM*CLTRPLPLLQR Trigger: TCTTTGGAGTAAGGGCAAGGGCCGGGTCAAGCACCACATGACTTTTGATTTTGTGGCACCTCGGCCCTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 72 bp | ACCCAACGAGGCCCCGACTTTCGGATCAGGGCTGGTTaGCAAGTGAAGTGGCCTGGAGGCAGAATGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TQRGPDFRIRAG*QVKWPGGRMSE Trigger: TTCAGACATTCTGCCTCCAGGCCACTTCACTTGCAAACCAGCCCTGATCCGAAAGTCGGGGCCTCGTTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 90 bp | TCTGCAATGACCCAACGAGGCCCCGACTTTCGGATCAGGGCTGGTTaGCAAGTGAAGTGGCCTGGAGGCAGAATGTCTGAAAACTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SAMTQRGPDFRIRAG*QVKWPGGRMSENSL Trigger: AAGGGAGTTTTCAGACATTCTGCCTCCAGGCCACTTCACTTGCAAACCAGCCCTGATCCGAAAGTCGGGGCCTCGTTGGGTCATTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | TCCAAGATCCGGAGGAAGCTCAAGTGGTGCAGTGCTTaGAAGGGTACTGAGCTCAGATTGCAGCGGGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: SKIRRKLKWCSA*KGTELRLQRVI Trigger: TATCACCCGCTGCAATCTGAGCTCAGTACCCTTCCAAGCACTGCACCACTTGAGCTTCCTCCGGATCTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 90 bp | GCAGTCAGGCCTGAGAATATCCCAGGACCCACAATTCTCAGTCGATaGCCCTGCAGCCTCAGGGTGAGTAGACTTTGTAGGCCATGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AVRPENIPGPTILSR*PCSLRVSRLCRPWK Trigger: TTTCCATGGCCTACAAAGTCTACTCACCCTGAGGCTGCAGGGCAATCGACTGAGAATTGTGGGTCCTGGGATATTCTCAGGCCTGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 72 bp | CTGAGCCTTCGAGCTGGGATGGCTGAGATAGGATTCTaGGATAGATCCAAGATCCGGAGGAAGCTCAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLRAGMAEIGF*DRSKIRRKLKW Trigger: CCACTTGAGCTTCCTCCGGATCTTGGATCTATCTCAGAATCCTATCTCAGCCATCCCAGCTCGAAGGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 72 bp | CCTGAGAATATCCCAGGACCCACAATTCTCAGTCGATaGCCCTGCAGCCTCAGGGTGAGTAGACTTTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PENIPGPTILSR*PCSLRVSRLCR Trigger: CCTACAAAGTCTACTCACCCTGAGGCTGCAGGGCAATCGACTGAGAATTGTGGGTCCTGGGATATTCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 72 bp | AGAAAGAAAGGCCCTGGGATCCCTGGCATAGTGATGTaGGGGTCAGACAGAGTGCCATTTGGTGGCTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RKKGPGIPGIVM*GSDRVPFGGST Trigger: AGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAACATCACTATGCCAGGGATCCCAGGGCCTTTCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 90 bp | CTGCTGTCCAGAAAGAAAGGCCCTGGGATCCCTGGCATAGTGATGTaGGGGTCAGACAGAGTGCCATTTGGTGGCTCAACTTGGATAACT | + |
|
Preference number: 6 (lower is better) Translates to: LLSRKKGPGIPGIVM*GSDRVPFGGSTWIT Trigger: AGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAACATCACTATGCCAGGGATCCCAGGGCCTTTCTTTCTGGACAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 90 bp | CGAGGTGCCACAAAATCAAAAGTCATGTGGTGCTTGACCCGGCCCTaGCCCTTACTCCAAAGAGCAATCAGACCAAAGCAGAGGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: RGATKSKVMWCLTRP*PLLQRAIRPKQRVT Trigger: AGTGACCCTCTGCTTTGGTCTGATTGCTCTTTGGAGTAAGGGCAAGGGCCGGGTCAAGCACCACATGACTTTTGATTTTGTGGCACCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 90 bp | CATAGTGATGTTGGGGTCAGACAGAGTGCCATTTGGTGGCTCAACTaGGATAACTTCCAGCCAGGTTCTCAGAGAGTCATTCCCAGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: HSDVGVRQSAIWWLN*DNFQPGSQRVIPSD Trigger: GTCGCTGGGAATGACTCTCTGAGAACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAACATCACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 72 bp | AATCACAGGTTAGGGGGTTACCAGACAGCCTCAGGGTaGCCAGTTTGTCTGGAGAAGGAAAGGCTGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NHRLGGYQTASG*PVCLEKERLFP Trigger: AGGAAACAGCCTTTCCTTCTCCAGACAAACTGGTCACCCTGAGGCTGTCTGGTAACCCCCTAACCTGTGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | ACAAACACCAGGTGGTTATCTCCAACCTCCAGCTGCTaGAGACTACCTAGCTCACTAAAGGCTCCATCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: TNTRWLSPTSSC*RLPSSLKAPSR Trigger: TCTAGATGGAGCCTTTAGTGAGCTAGGTAGTCTCCAGCAGCTGGAGGTTGGAGATAACCACCTGGTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | TTGGGGTCAGACAGAGTGCCATTTGGTGGCTCAACTTaGATAACTTCCAGCCAGGTTCTCAGAGAGTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LGSDRVPFGGST*ITSSQVLRESF Trigger: GAATGACTCTCTGAGAACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | CATAGTGATGTTGGGGTCAGACAGAGTGCCATTTGGTaGCTCAACTTGGATAACTTCCAGCCAGGTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HSDVGVRQSAIW*LNLDNFQPGSQ Trigger: CTGAGAACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAACATCACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CCA 72 bp | TGGCATAGTGATGTTGGGGTCAGACAGAGTGCCATTTaGTGGCTCAACTTGGATAACTTCCAGCCAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WHSDVGVRQSAI*WLNLDNFQPGS Trigger: AGAACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAACATCACTATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS CAA 72 bp | GTTGGGGTCAGACAGAGTGCCATTTGGTGGCTCAACTaGGATAACTTCCAGCCAGGTTCTCAGAGAGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: VGVRQSAIWWLN*DNFQPGSQRVI Trigger: AATGACTCTCTGAGAACCTGGCTGGAAGTTATCCAAGTTGAGCCACCAAATGGCACTCTGTCTGACCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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| CDS TCA 72 bp | TTGTCTGGAGAAGGAAAGGCTGTTTCCTCTAGAGTCTaGAGAGCATTGTCTGCTACATCCAGCAAGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSGEGKAVSSRV*RALSATSSKWK Trigger: CTTCCACTTGCTGGATGTAGCAGACAATGCTCTTCAGACTCTAGAGGAAACAGCCTTTCCTTCTCCAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050975.6 |
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