Pregenerated sensors for LINGO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051067Ensembl transcript IDs: ENSMUST00000053986.9
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTCTGGGGTAGCCCTGGGTACCCGAGCAGCGGTGGACAGGAGCTaGGCTGGTGCATTCCCAGGTCCCTACTGCAGTCCTGGGCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: GSGVALGTRAAVDRS*AGAFPGPYCSPGPC Trigger: ACAGGGCCCAGGACTGCAGTAGGGACCTGGGAATGCACCAGCCCAGCTCCTGTCCACCGCTGCTCGGGTACCCAGGGCTACCCCAGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 90 bp | CGGGAACAGGGCTCCCGAGATGACTGTGAGCCTCTCTGCAGGGTCTaGGGTAGCCCTGGGTACCCGAGCAGCGGTGGACAGGAGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: REQGSRDDCEPLCRV*GSPGYPSSGGQELG Trigger: GCCCAGCTCCTGTCCACCGCTGCTCGGGTACCCAGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTCATCTCGGGAGCCCTGTTCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 90 bp | TGGGGTAGCCCTGGGTACCCGAGCAGCGGTGGACAGGAGCTGGGCTaGTGCATTCCCAGGTCCCTACTGCAGTCCTGGGCCCTGTATGAG | + |
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Preference number: 1 (lower is better) Translates to: WGSPGYPSSGGQELG*CIPRSLLQSWALYE Trigger: CTCATACAGGGCCCAGGACTGCAGTAGGGACCTGGGAATGCACCAGCCCAGCTCCTGTCCACCGCTGCTCGGGTACCCAGGGCTACCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR GCA 90 bp | GGTGGCCTGAGAGGCACTCCTAGGACCCAGGGCAGCCAGCCCTCCTaGAAGCAGATGTCCAGTATGGCAAGGCAGGGTGGAGGGACCTCT | + |
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Preference number: 1 (lower is better) Translates to: GGLRGTPRTQGSQPS*KQMSSMARQGGGTS Trigger: AGAGGTCCCTCCACCCTGCCTTGCCATACTGGACATCTGCTTGCAGGAGGGCTGGCTGCCCTGGGTCCTAGGAGTGCCTCTCAGGCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 90 bp | GGACAGGAGCTGGGCTGGTGCATTCCCAGGTCCCTACTGCAGTCCTaGGCCCTGTATGAGACACAGGTCACAATGAGCGGAGGAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: GQELGWCIPRSLLQS*ALYETQVTMSGGDS Trigger: GCTGTCTCCTCCGCTCATTGTGACCTGTGTCTCATACAGGGCCCAGGACTGCAGTAGGGACCTGGGAATGCACCAGCCCAGCTCCTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR TCA 90 bp | GGGCTGGTGCATTCCCAGGTCCCTACTGCAGTCCTGGGCCCTGTATaGGACACAGGTCACAATGAGCGGAGGAGACAGCCACTGCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: GLVHSQVPTAVLGPV*DTGHNERRRQPLQA Trigger: TGCTTGCAGTGGCTGTCTCCTCCGCTCATTGTGACCTGTGTCTCATACAGGGCCCAGGACTGCAGTAGGGACCTGGGAATGCACCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR TCA 90 bp | GACTTTGGGGCCACAGCCTGCACCTGCATAAGAAACCATGGACCCTaGGTGTCCCCAGCCACTTTGTGTCTTAGCACAGCAGCCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: DFGATACTCIRNHGP*VSPATLCLSTAATA Trigger: TGCTGTGGCTGCTGTGCTAAGACACAAAGTGGCTGGGGACACTCAGGGTCCATGGTTTCTTATGCAGGTGCAGGCTGTGGCCCCAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 90 bp | AAGACACAGGGTCCCAGTGGACCACAGACATTACAGCTGGACAGGTaGGAAAAGAGCTGCAGCCTGTCTTACCATATGTCCAGGGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: KTQGPSGPQTLQLDR*EKSCSLSYHMSRGS Trigger: TGACCCCCTGGACATATGGTAAGACAGGCTGCAGCTCTTTTCCCACCTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACCCTGTGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 90 bp | CTACAGGCTCAGACTTGTTCTGTAAAGGAAGACACAGGGTCCCAGTaGACCACAGACATTACAGCTGGACAGGTGGGAAAAGAGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LQAQTCSVKEDTGSQ*TTDITAGQVGKELQ Trigger: CTGCAGCTCTTTTCCCACCTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACCCTGTGTCTTCCTTTACAGAACAAGTCTGAGCCTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR GCA 90 bp | GAGCTGACTTGCAGTCACCTCCATGCCTACCCCCTGGGAAAAATATaGATAGGTGGAAATTATCTGGGACTGGACAGAGGTTTGAACGGT | + |
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Preference number: 1 (lower is better) Translates to: ELTCSHLHAYPLGKI*IGGNYLGLDRGLNG Trigger: ACCGTTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCATATTTTTCCCAGGGGGTAGGCATGGAGGTGACTGCAAGTCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR TCA 90 bp | GTCCAGGACAAAGAGGTCCATCTTGTCAGACTCAGGGATAGAGTCTaGAAATGCCAGTCAACCCAGTCATTCGTGTCCTGTCAATCAGTT | + |
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Preference number: 1 (lower is better) Translates to: VQDKEVHLVRLRDRV*KCQSTQSFVSCQSV Trigger: AACTGATTGACAGGACACGAATGACTGGGTTGACTGGCATTTTCAGACTCTATCCCTGAGTCTGACAAGATGGACCTCTTTGTCCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACCTCTAGGGGACATGGGGACATGGCTTCTCCTGGCAGGTGGCCTCCTGACTGTGAGCCTCTCTaGAGGGTCTGGGGTAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GGTSRGHGDMASPGRWPPDCEPL*RVWGSP Trigger: AGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTC...AGGAGGCCACCTGCCAGGAGAAGCCATGTCCCCATGTCCCCTAGAGGTCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCCAGTGGACCACAGACATTACAGCTGGACAGGTGGGAAAAGAGCTGCAGCCTCTCTGCAGGGTCTaGGGTAGCCCTGGGTACCCG | + |
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Preference number: 2 (lower is better) Translates to: GSQWTTDITAGQVGKELQPLCRV*GSPGYP Trigger: CGGGTACCCAGGGCTACCCCAGACCCTGCAGAGAGG...CTGCAGCTCTTTTCCCACCTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTCCCAGTGGACCACAGACATTACAGCTGGACAGGTGGGAAAAGAGCTGCAGTCAACTGGCCCTGCCTaGTCACCCCTACAGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: GSQWTTDITAGQVGKELQSTGPA*SPLQQS Trigger: GGACTGCTGTAGGGGTGAGCAGGCAGGGCCAGTTGA...CTGCAGCTCTTTTCCCACCTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR TCA 90 bp | GGACACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTTGTTCTGGTGGATGTGGTGGCCTaGGAGGCACTCCTAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: GHKHEGTQGKGYRLRLVLVDVVA*EALLGP Trigger: GGGTCCTAGGAGTGCCTCTCAGGCCACCACATCCAC...CAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CCA 90 bp | GGACACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTTGTTCTGTGGTGGGATGGAAAGTaGCGGGAACAGGGCTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: GHKHEGTQGKGYRLRLVLWWDGK*REQGSR Trigger: TCGGGAGCCCTGTTCCCGCCACTTTCCATCCCACCA...CAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR TCA 90 bp | TATGAGACACAGGTCACAATGAGCGGAGGAGACAGCCACTGCAAGCACGGTGTGAGAAACCATGGACCCTaGGTGTCCCCAGCCACTTTG | + |
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Preference number: 2 (lower is better) Translates to: YETQVTMSGGDSHCKHGVRNHGP*VSPATL Trigger: CAAAGTGGCTGGGGACACTCAGGGTCCATGGTTTCT...CACACCGTGCTTGCAGTGGCTGTCTCCTCCGCTCATTGTGACCTGTGTCTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGACCTCTAGGGGACATGGGGACATGGCTTCTCCTGGCAGGTGGCCTCCTGCAAAAGATGTGATCTaGTCAAAAACAGTCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GGTSRGHGDMASPGRWPPAKDVI*SKTVLQ Trigger: CTGCAGGACTGTTTTTGAGCAGATCACATCTTTTGC...AGGAGGCCACCTGCCAGGAGAAGCCATGTCCCCATGTCCCCTAGAGGTCCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTAACTGTGGTCCTGGGCCCTGTATaGGACACAGGTCACAATGAG | + |
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Preference number: 2 (lower is better) Translates to: AKSHKMPSVPSFNGVLTVVLGPV*DTGHNE Trigger: CTCATTGTGACCTGTGTCTCATACAGGGCCCAGGAC...CACAGTTAGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTGTGGGACTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR GCA 90 bp | AACAGGGCTCCCGAGATGACTGTGAGCCTCTCTGCAGGGTCTGGGGTAGCCCTGAAACACTTCAGGAACTaGAAAAGATGTGATCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: NRAPEMTVSLSAGSGVALKHFRN*KRCDLL Trigger: GAGCAGATCACATCTTTTGCAGTTCCTGAAGTGTTT...CAGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTCATCTCGGGAGCCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTAACTGTGTGTAGAGCAGCAGAGTaGATGTGGTGGCCTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: AKSHKMPSVPSFNGVLTVCRAAE*MWWPER Trigger: CCTCTCAGGCCACCACATCCACTCTGCTGCTCTACA...CACAGTTAGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTGTGGGACTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTAACTGTGACCAGGCAGAGCTTGTCACAATCAACTaGCCCTGCCTGCTCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: QNALCPFFQRCPNCDQAELVTIN*PCLLTP Trigger: AGGGGTGAGCAGGCAGGGCCAGTTGATTGTGACAAG...CTCTGCCTGGTCACAGTTAGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CAA 90 bp | GACACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTaGTTCTGTAAAGGAAGACACAGGGTCCCAGTGGACCACAGACAT | + |
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Preference number: 2 (lower is better) Translates to: DTNMRAHRAKATGSD*FCKGRHRVPVDHRH Trigger: ATGTCTGTGGTCCACTGGGACCCTGTGTCTTCCTTTACAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR GCA 90 bp | ACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTTGTTCTGTAAATTCCCAGGTCCCTACTaGAGTCCTGGGCCCTGTATG | + |
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Preference number: 2 (lower is better) Translates to: TNMRAHRAKATGSDLFCKFPGPY*SPGPCM Trigger: CATACAGGGCCCAGGACTGCAGTAGGGACCTGGGAA...TTTACAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCTTGATCTGGGTCTCTCATTGCATTAGGTTTGCCTCCTTCCTGTCTGGATCCCTACTGCAGTCCTaGGCCCTGTATGAGACACAG | + |
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Preference number: 2 (lower is better) Translates to: PSLIWVSHCIRFASFLSGSLLQS*ALYETQ Trigger: CTGTGTCTCATACAGGGCCCAGGACTGCAGTAGGGA...TCCAGACAGGAAGGAGGCAAACCTAATGCAATGAGAGACCCAGATCAAGCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTTGTTCTGTAAAAGCAGATGTCCAGTATaGCAAGGCAGGGTGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: TNMRAHRAKATGSDLFCKSRCPV*QGRVEG Trigger: TCCCTCCACCCTGCCTTGCCATACTGGACATCTGCT...TTTACAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAGCTTGATCTGGGTCTCTCATTGCATTAGGTTTGCCTCCTTCCTGTCTGGAAGGTGGGAAAAGAGCTaGAGCCTGTCTTACCATATG | + |
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Preference number: 2 (lower is better) Translates to: PSLIWVSHCIRFASFLSGRWEKS*SLSYHM Trigger: CATATGGTAAGACAGGCTGCAGCTCTTTTCCCACCT...TCCAGACAGGAAGGAGGCAAACCTAATGCAATGAGAGACCCAGATCAAGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCTTGATCTGGGTCTCTCATTGCATTAGGTTTGCCTCCTTCCTGTCTGGACACAGACATTACAGCTaGACAGGTGGGAAAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSLIWVSHCIRFASFLSGHRHYS*TGGKRA Trigger: AGCTCTTTTCCCACCTGTCCAGCTGTAATGTCTGTG...TCCAGACAGGAAGGAGGCAAACCTAATGCAATGAGAGACCCAGATCAAGCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR TCA 90 bp | CAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTAACTGTGACCAGGCAGAGGAACTGCAAAAGATGTaGTCTGCTCAAAAACAGTCC | + |
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Preference number: 2 (lower is better) Translates to: QNALCPFFQRCPNCDQAEELQKM*SAQKQS Trigger: GGACTGTTTTTGAGCAGATCACATCTTTTGCAGTTC...CTCTGCCTGGTCACAGTTAGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CAA 90 bp | TTGTGTCTTAGCACAGCAGCCACAGCAAAGGGTGGGAAAGACACGTaGAAACCCTTAGAAAACACTTCAGGAACTGCAAAAGATGTGATC | + |
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Preference number: 2 (lower is better) Translates to: LCLSTAATAKGGKDT*KPLENTSGTAKDVI Trigger: GATCACATCTTTTGCAGTTCCTGAAGTGTTTTCTAAGGGTTTCAACGTGTCTTTCCCACCCTTTGCTGTGGCTGCTGTGCTAAGACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 72 bp | CCTGGGTACCCGAGCAGCGGTGGACAGGAGCTGGGCTaGTGCATTCCCAGGTCCCTACTGCAGTCCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: PGYPSSGGQELG*CIPRSLLQSWA Trigger: GGCCCAGGACTGCAGTAGGGACCTGGGAATGCACCAGCCCAGCTCCTGTCCACCGCTGCTCGGGTACCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR GCA 72 bp | CGGGAACAGGGCTCCCGAGATGACTGTGAGCCTCTCTaGAGGGTCTGGGGTAGCCCTGGGTACCCGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: REQGSRDDCEPL*RVWGSPGYPSS Trigger: GCTGCTCGGGTACCCAGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTCATCTCGGGAGCCCTGTTCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 72 bp | GGCTCCCGAGATGACTGTGAGCCTCTCTGCAGGGTCTaGGGTAGCCCTGGGTACCCGAGCAGCGGTGGACAG | + |
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Preference number: 3 (lower is better) Translates to: GSRDDCEPLCRV*GSPGYPSSGGQ Trigger: CTGTCCACCGCTGCTCGGGTACCCAGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTCATCTCGGGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR TCA 72 bp | CACGGTGTGTCCTGTGTCCCCAGGCATCTGGGGACGTaGCTTCTGAGTAAGGGCACAGGGAGGACCCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: HGVSCVPRHLGT*LLSKGTGRTLD Trigger: GTCCAGGGTCCTCCCTGTGCCCTTACTCAGAAGTCACGTCCCCAGATGCCTGGGGACACAGGACACACCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR GCA 72 bp | AGAGGCACTCCTAGGACCCAGGGCAGCCAGCCCTCCTaGAAGCAGATGTCCAGTATGGCAAGGCAGGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: RGTPRTQGSQPS*KQMSSMARQGG Trigger: TCCACCCTGCCTTGCCATACTGGACATCTGCTTGCAGGAGGGCTGGCTGCCCTGGGTCCTAGGAGTGCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 72 bp | AGGGCAGCCAGCCCTCCTGCAAGCAGATGTCCAGTATaGCAAGGCAGGGTGGAGGGACCTCTAGGGGACATG | + |
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Preference number: 3 (lower is better) Translates to: RAASPPASRCPV*QGRVEGPLGDM Trigger: CATGTCCCCTAGAGGTCCCTCCACCCTGCCTTGCCATACTGGACATCTGCTTGCAGGAGGGCTGGCTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CAA 90 bp | AACAGGGCTCCCGAGATGACTGTGAGCCTCTCTGCAGGGTCTGGGGTAGCCCTGGTGTCCCCAGCCACTTaGTGTCTTAGCACAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: NRAPEMTVSLSAGSGVALVSPAT*CLSTAA Trigger: GGCTGCTGTGCTAAGACACAAAGTGGCTGGGGACAC...CAGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTCATCTCGGGAGCCCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR TCA 72 bp | TGTCCTGTGTCCCCAGGCATCTGGGGACGTGACTTCTaGGTAAGGGCACAGGGAGGACCCTGGACTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: CPVSPGIWGRDF*VRAQGGPWTLG Trigger: CCCCAAAGTCCAGGGTCCTCCCTGTGCCCTTACTCAGAAGTCACGTCCCCAGATGCCTGGGGACACAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR GCA 72 bp | GAGACACAGGTCACAATGAGCGGAGGAGACAGCCACTaGAAGCACGGTGTGTCCTGTGTCCCCAGGCATCTG | + |
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Preference number: 3 (lower is better) Translates to: ETQVTMSGGDSH*KHGVSCVPRHL Trigger: CAGATGCCTGGGGACACAGGACACACCGTGCTTGCAGTGGCTGTCTCCTCCGCTCATTGTGACCTGTGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR GCA 72 bp | GACAGGAGCTGGGCTGGTGCATTCCCAGGTCCCTACTaGAGTCCTGGGCCCTGTATGAGACACAGGTCACAA | + |
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Preference number: 3 (lower is better) Translates to: DRSWAGAFPGPY*SPGPCMRHRSQ Trigger: TTGTGACCTGTGTCTCATACAGGGCCCAGGACTGCAGTAGGGACCTGGGAATGCACCAGCCCAGCTCCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 72 bp | CTGGGCTGGTGCATTCCCAGGTCCCTACTGCAGTCCTaGGCCCTGTATGAGACACAGGTCACAATGAGCGGA | + |
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Preference number: 3 (lower is better) Translates to: LGWCIPRSLLQS*ALYETQVTMSG Trigger: TCCGCTCATTGTGACCTGTGTCTCATACAGGGCCCAGGACTGCAGTAGGGACCTGGGAATGCACCAGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGTAAAGGAAGACACAGGGTCCCAGTGGACCACAGACATTACAGCTGGACAGGGAGGACCCTGGACTTaGGGGCCACAGCCTGCACCT | + |
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Preference number: 3 (lower is better) Translates to: SVKEDTGSQWTTDITAGQGGPWT*GPQPAP Trigger: AGGTGCAGGCTGTGGCCCCAAAGTCCAGGGTCCTCC...CTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACCCTGTGTCTTCCTTTACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR TCA 72 bp | CATTCCCAGGTCCCTACTGCAGTCCTGGGCCCTGTATaGGACACAGGTCACAATGAGCGGAGGAGACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: HSQVPTAVLGPV*DTGHNERRRQP Trigger: TGGCTGTCTCCTCCGCTCATTGTGACCTGTGTCTCATACAGGGCCCAGGACTGCAGTAGGGACCTGGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR-3UTR CAA 90 bp | GGAGGGACCTCTAGGGGACATGGGGACATGGCTTCTCCTGGCAGGTGGCCTCCTGGTGGGAAAGACACGTaGAAACCCTTAGAAAACACT | + |
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Preference number: 3 (lower is better) Translates to: GGTSRGHGDMASPGRWPPGGKDT*KPLENT Trigger: AGTGTTTTCTAAGGGTTTCAACGTGTCTTTCCCACC...AGGAGGCCACCTGCCAGGAGAAGCCATGTCCCCATGTCCCCTAGAGGTCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR TCA 72 bp | GCCACAGCCTGCACCTGCATAAGAAACCATGGACCCTaGGTGTCCCCAGCCACTTTGTGTCTTAGCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: ATACTCIRNHGP*VSPATLCLSTA Trigger: TGCTGTGCTAAGACACAAAGTGGCTGGGGACACTCAGGGTCCATGGTTTCTTATGCAGGTGCAGGCTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 72 bp | CTGCAGCCTGTCTTACCATATGTCCAGGGGGTCAGTTaGCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LQPVLPYVQGVS*PSPTKCPLSLL Trigger: AAGAAGGGACAGAGGGCATTTTGTGGGACTTGGCCAACTGACCCCCTGGACATATGGTAAGACAGGCTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR CCA 72 bp | GGTCCCAGTGGACCACAGACATTACAGCTGGACAGGTaGGAAAAGAGCTGCAGCCTGTCTTACCATATGTCC | + |
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Preference number: 3 (lower is better) Translates to: GPSGPQTLQLDR*EKSCSLSYHMS Trigger: GGACATATGGTAAGACAGGCTGCAGCTCTTTTCCCACCTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| 3UTR TCA 72 bp | AGGTTGTTGGGACTGGGGAACCCCGATGTAATGTTCTaGCACTTTGTGAACTCTAACCCTGCCGGGAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLLGLGNPDVMF*HFVNSNPAGSA Trigger: TGCACTCCCGGCAGGGTTAGAGTTCACAAAGTGTCAGAACATTACATCGGGGTTCCCCAGTCCCAACAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| 3UTR GCA 72 bp | TGCAGTCACCTCCATGCCTACCCCCTGGGAAAAATATaGATAGGTGGAAATTATCTGGGACTGGACAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CSHLHAYPLGKI*IGGNYLGLDRG Trigger: ACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCATATTTTTCCCAGGGGGTAGGCATGGAGGTGACTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| 3UTR CCA 72 bp | CCTCCATGCCTACCCCCTGGGAAAAATATGCATAGGTaGAAATTATCTGGGACTGGACAGAGGTTTGAACGG | + |
|
Preference number: 3 (lower is better) Translates to: PPCLPPGKNMHR*KLSGTGQRFER Trigger: CCGTTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCATATTTTTCCCAGGGGGTAGGCATGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| 3UTR TCA 72 bp | AAAGAGGTCCATCTTGTCAGACTCAGGGATAGAGTCTaGAAATGCCAGTCAACCCAGTCATTCGTGTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KEVHLVRLRDRV*KCQSTQSFVSC Trigger: ACAGGACACGAATGACTGGGTTGACTGGCATTTTCAGACTCTATCCCTGAGTCTGACAAGATGGACCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGGACCTCTAGGGGACATGGGGACATGGCTTCTCCTGGCAGGTGGCCTCCTTTGCGCGCACCACCCTaGCCAGCCGCAGCCGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGTSRGHGDMASPGRWPPLRAPP*PAAAAG Trigger: TCCGGCGGCTGCGGCTGGCCAGGGTGGTGCGCGCAA...AGGAGGCCACCTGCCAGGAGAAGCCATGTCCCCATGTCCCCTAGAGGTCCCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGCTCCCGAGATGACTGTGAGCCTCTCTGCAGGGTCTGGGGTAGCCCTGGGAGGCCTGCGGCTCGATaGCAGCCAGCAGGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSRDDCEPLCRVWGSPGRPAAR*QPAGLL Trigger: CAGGAGCCCTGCTGGCTGTCATCGAGCCGCAGGCCT...CCCAGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTCATCTCGGGAGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGCCCTCCTGCAAGCAGATGTCCAGTATGGCAAGGCAGGGTGGAGGGACCCTCCAGGGCGGCGATaGCCAGGTGGCGCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPALLQADVQYGKAGWRDPPGRR*PGGAGA Trigger: TGCGCCTGCGCCACCTGGCCATCGCCGCCCTGGAGG...GTCCCTCCACCCTGCCTTGCCATACTGGACATCTGCTTGCAGGAGGGCTGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGCCCTGGGTACCCGAGCAGCGGTGGACAGGAGCTGGGCTGGTGCATTCCCCGGTTGGCGGCCGGCTaGACGGTCAAGGTGGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSPGYPSSGGQELGWCIPRLAAG*TVKVAK Trigger: TTTCGCCACCTTGACCGTCCAGCCGGCCGCCAACCG...GGGAATGCACCAGCCCAGCTCCTGTCCACCGCTGCTCGGGTACCCAGGGCTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | GGTAGCCCTGGGTACCCGAGCAGCGGTGGACAGGAGCTGGGCTGGTGCATTCCCGGCTCAGCTCCAGCATaGGAGTTTCGGCCGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPGYPSSGGQELGWCIPGSAPA*EFRPGC Trigger: GCATCCCGGCCGAAACTCGCATGCTGGAGCTGAGCC...GGGAATGCACCAGCCCAGCTCCTGTCCACCGCTGCTCGGGTACCCAGGGCTACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTCCCGAGATGACTGTGAGCCTCTCTGCAGGGTCTGGGGTAGCCCTGGGAGGGCTCCTGCTAGGTaGAGCTCACGCAGGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QGSRDDCEPLCRVWGSPGRAPAR*SSRRRT Trigger: GGTGCGCCTGCGTGAGCTGCACCTAGCAGGAGCCCT...CCCAGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTCATCTCGGGAGCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | GGGTCCCAGTGGACCACAGACATTACAGCTGGACAGGTGGGAAAAGAGCTGCAGAGCCCCACGAAGGCCTaGGGCTCGATGACAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQWTTDITAGQVGKELQSPTKA*GSMTAS Trigger: GCTGGCTGTCATCGAGCCGCAGGCCTTCGTGGGGCT...CTGCAGCTCTTTTCCCACCTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | GTCCCAGTGGACCACAGACATTACAGCTGGACAGGTGGGAAAAGAGCTGCAGCCAGGCCACAGTGCGGGTaGATGCGGAGCACTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPVDHRHYSWTGGKRAAARPQCG*MRSTRS Trigger: GCTGCGAGTGCTCCGCATCCACCCGCACTGTGGCCT...GGCTGCAGCTCTTTTCCCACCTGTCCAGCTGTAATGTCTGTGGTCCACTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGCCCTGGGTACCCGAGCAGCGGTGGACAGGAGCTGGGCTGGTGCATTCCCAGCGTGTTCACCGAGTaGAATGTGTTCTCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPGYPSSGGQELGWCIPSVFTE*NVFSSS Trigger: ACTGGAGGAGAACACATTCCACTCGGTGAACACGCT...GGGAATGCACCAGCCCAGCTCCTGTCCACCGCTGCTCGGGTACCCAGGGCTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGCTTGATCTGGGTCTCTCATTGCATTAGGTTTGCCTCCTTCCTGTCTGGACCCAAGCCCCGCAGGTaGCCCAGCGACTCCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSLIWVSHCIRFASFLSGPKPRR*PSDSGD Trigger: GTCCCCGGAGTCGCTGGGTCACCTGCGGGGCTTGGG...TCCAGACAGGAAGGAGGCAAACCTAATGCAATGAGAGACCCAGATCAAGCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCACCCCTACAGCAGTCCACTTTCCCTGTAGAGCAGCAGAGTGGATGTGGTGCCCACAGGCCACAGTaGGGGTGGATGCGGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CSPLQQSTFPVEQQSGCGAHRPQ*GWMRST Trigger: AGTGCTCCGCATCCACCCGCACTGTGGCCTGTGGGC...ACCACATCCACTCTGCTGCTCTACAGGGAAAGTGGACTGCTGTAGGGGTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | TGCATAGGTGGAAATTATCTGGGACTGGACAGAGGTTTGAACGGTCCGGCTCACCCCACCTCCAGCCGCTaGAGGCTGCGCAGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CIGGNYLGLDRGLNGPAHPTSSR*RLRRSW Trigger: CCAGGACCTGCGCAGCCTGCAGCGGCTGGAGGTGGG...GTGAGCCGGACCGTTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | TGCATAGGTGGAAATTATCTGGGACTGGACAGAGGTTTGAACGGTCCGGCTCACCGCAGGCCAGCGGGTTaGCGTCCACGCGCAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CIGGNYLGLDRGLNGPAHRRPAG*RPRAAS Trigger: AGACGCTGCGCGTGGACGGCAACCCGCTGGCCTGCG...GTGAGCCGGACCGTTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCACCCCTACAGCAGTCCACTTTCCCTGTAGAGCAGCAGAGTGGATGTGGTACCTGCGTCTCGTTGTaGCCATCGCCCTGGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSPLQQSTFPVEQQSGCGTCVSL*PSPWVR Trigger: CCGGACCCAGGGCGATGGGCACAACGAGACGCAGGT...ACCACATCCACTCTGCTGCTCTACAGGGAAAGTGGACTGCTGTAGGGGTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | GCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTAACTGTGTTGTGCCCATCGCCCTaGGTCCGGTTGGCGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AKSHKMPSVPSFNGVLTVLCPSP*VRLAAG Trigger: GCCGGCCGCCAACCGGACCCAGGGCGATGGGCACAA...CACAGTTAGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTGTGGGACTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR TCA 90 bp | AACAGGGCTCCCGAGATGACTGTGAGCCTCTCTGCAGGGTCTGGGGTAGCCCTGCAATCACATTATGGTTaGGGTCCAGCTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NRAPEMTVSLSAGSGVALQSHYG*GPAPPG Trigger: CCCTGGAGGAGCTGGACCTCAACCATAATGTGATTG...CAGGGCTACCCCAGACCCTGCAGAGAGGCTCACAGTCATCTCGGGAGCCCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTTGTTCTGTAAAGGAGCACTCGCAGCGTaGGGGGCAGCCTGCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TNMRAHRAKATGSDLFCKGALAA*GAACGQ Trigger: CTGGCCGCAGGCTGCCCCGCACGCTGCGAGTGCTCC...TTTACAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGCTTGATCTGGGTCTCTCATTGCATTAGGTTTGCCTCCTTCCTGTCTGGATCAGCCCACGCAGGCTaGCCGGGGCCACCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLIWVSHCIRFASFLSGSAHAG*PGPPPP Trigger: TGGAGGAGGTGGCCCCGGGCAGCCTGCGTGGGCTGA...TCCAGACAGGAAGGAGGCAAACCTAATGCAATGAGAGACCCAGATCAAGCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR TCA 90 bp | TCAGTTGGCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTCGCGTGGCACCATGCTaGTGGGGTTGTGCGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVGQVPQNALCPFFQRCPRVAPC*WGCATG Trigger: ACCTGTCGCACAACCCCATCAGCATGGTGCCACGCG...AGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTGTGGGACTTGGCCAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR TCA 90 bp | GCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTAACTGTGAGGCCCTGCGGGAGATaGACACCAGGTCATTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AKSHKMPSVPSFNGVLTVRPCGR*TPGHCR Trigger: GCGACAATGACCTGGTGTTCATCTCCCGCAGGGCCT...CACAGTTAGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTGTGGGACTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTTGGCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTTACCCCCGGCGTTGCTaGCCACACATGTGTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGQVPQNALCPFFQRCPYPRRC*PHMCRC Trigger: GCACCTACACATGTGTGGCCAGCAACGCCGGGGGTA...AGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTGTGGGACTTGGCCAACTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| 3UTR CAA 72 bp | GCTGCAGCCTGTCTTACCATATGTCCAGGGGGTCAGTaGGCCAAGTCCCACAAAATGCCCTCTGTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAACLTICPGGQ*AKSHKMPSVPS Trigger: AGAAGGGACAGAGGGCATTTTGTGGGACTTGGCCAACTGACCCCCTGGACATATGGTAAGACAGGCTGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGCACAGCAGCCACAGCAAAGGGTGGGAAAGACACGTTGAAACCCTTAGCCTCTCCCGGATCTTaGGCTTGCGGCACACGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLSTAATAKGGKDTLKPLASPGS*ACGTRS Trigger: ACTTCGTGTGCCGCAAGCCCAAGATCCGGGAGAGGC...TAAGGGTTTCAACGTGTCTTTCCCACCCTTTGCTGTGGCTGCTGTGCTAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGGAAAAATATGCATAGGTGGAAATTATCTGGGACTGGACAGAGGTTTGAACCACGCCCAGGAAGGTaGTGCACCCCATGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKNMHRWKLSGTGQRFEPRPGR*CTPWRW Trigger: CCACCGCCATGGGGTGCATCACCTTCCTGGGCGTGG...TTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCATATTTTTCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTTGTTCTGTAAAAGGGTCTTCCGCCTCTaGACGATCCACAGCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TNMRAHRAKATGSDLFCKRVFRL*TIHSRR Trigger: TCGCCTGCTGTGGATCGTGCAGAGGCGGAAGACCCT...TTTACAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAAAAATATGCATAGGTGGAAATTATCTGGGACTGGACAGAGGTTTGAACGGCCAGGGGCGCTGTaGGCAGCAGCAGCAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGKNMHRWKLSGTGQRFERPGAL*AAAASA Trigger: TGCACTTGCTGCTGCTGCCCACAGCGCCCCTGGCCG...TTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCATATTTTTCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTAAAGGAAGACACAGGGTCCCAGTGGACCACAGACATTACAGCTGGACAGAGCTTCTGGAAATTCTaGTCCTCCAGGGCGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVKEDTGSQWTTDITAGQSFWKF*SSRAAM Trigger: CATCGCCGCCCTGGAGGACCAGAATTTCCAGAAGCT...CTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACCCTGTGTCTTCCTTTACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CCA 90 bp | TGCTCACCCCTACAGCAGTCCACTTTCCCTGTAGAGCAGCAGAGTGGATGTGGTCAGATGCGAGAGTCCTaGAAGCTTCTGGAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSPLQQSTFPVEQQSGCGQMRES*KLLEIL Trigger: CAGAATTTCCAGAAGCTTCCAGGACTCTCGCATCTG...ACCACATCCACTCTGCTGCTCTACAGGGAAAGTGGACTGCTGTAGGGGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR TCA 90 bp | TGCATAGGTGGAAATTATCTGGGACTGGACAGAGGTTTGAACGGTCCGGCTCACAGATCATCTTCATGTTaGACTTGCGCGCACCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CIGGNYLGLDRGLNGPAHRSSSC*TCAHHP Trigger: AGGGTGGTGCGCGCAAGTTCAACATGAAGATGATCT...GTGAGCCGGACCGTTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGGAAAAATATGCATAGGTGGAAATTATCTGGGACTGGACAGAGGTTTGAAGGTTGTCCGAAAGGTTaGGCAGGCGGATCTGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGKNMHRWKLSGTGQRFEGCPKG*AGGSVA Trigger: TGCGACAGATCCGCCTGCTCAACCTTTCGGACAACC...TTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCATATTTTTCCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR GCA 90 bp | CCTGGGAAAAATATGCATAGGTGGAAATTATCTGGGACTGGACAGAGGTTTGAACCCGGATCTTGGGCTTaGGGCACACGAAGTACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGKNMHRWKLSGTGQRFEPGSWA*GTRSTR Trigger: TCGAGTACTTCGTGTGCCGCAAGCCCAAGATCCGGG...TTCAAACCTCTGTCCAGTCCCAGATAATTTCCACCTATGCATATTTTTCCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| 3UTR CAA 72 bp | AGCACAGCAGCCACAGCAAAGGGTGGGAAAGACACGTaGAAACCCTTAGAAAACACTTCAGGAACTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: STAATAKGGKDT*KPLENTSGTAK Trigger: TTTTGCAGTTCCTGAAGTGTTTTCTAAGGGTTTCAACGTGTCTTTCCCACCCTTTGCTGTGGCTGCTGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS CCA 90 bp | CCAGGCAGCACGCGTGCCCGGCCCCGGCTGGCAGCCGTAACCGAGTaGTGCTGGGGCGTCACCCAGGCTACCGTGGGCGCGGGCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSTRARPRLAAVTE*CWGVTQATVGAGSP Trigger: GGGTGAGCCCGCGCCCACGGTAGCCTGGGTGACGCCCCAGCACCACTCGGTTACGGCTGCCAGCCGGGGCCGGGCACGCGTGCTGCCTGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS GCA 90 bp | GGCAGCACGCGTGCCCGGCCCCGGCTGGCAGCCGTAACCGAGTGGTaGTGGGGCGTCACCCAGGCTACCGTGGGCGCGGGCTCACCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSTRARPRLAAVTEW*WGVTQATVGAGSPS Trigger: TGAGGGTGAGCCCGCGCCCACGGTAGCCTGGGTGACGCCCCAGCACCACTCGGTTACGGCTGCCAGCCGGGGCCGGGCACGCGTGCTGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS CCA 90 bp | AGCACGCGTGCCCGGCCCCGGCTGGCAGCCGTAACCGAGTGGTGCTaGGGCGTCACCCAGGCTACCGTGGGCGCGGGCTCACCCTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: STRARPRLAAVTEWC*GVTQATVGAGSPSA Trigger: CGCTGAGGGTGAGCCCGCGCCCACGGTAGCCTGGGTGACGCCCCAGCACCACTCGGTTACGGCTGCCAGCCGGGGCCGGGCACGCGTGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS GCA 90 bp | GGGCGTCGCCGCGCACCTCGGCGGGGGTGGCGCAGGCGGGGAGCCTaGCGTCGAAGTTCAGGGTCTTCCGCCTCTGCACGATCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRRRAPRRGWRRRGA*RRSSGSSASARSTA Trigger: TGCTGTGGATCGTGCAGAGGCGGAAGACCCTGAACTTCGACGGCAGGCTCCCCGCCTGCGCCACCCCCGCCGAGGTGCGCGGCGACGCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS GCA 90 bp | GGATGCGGTTGCGGCTCAGCTCCAGCATGCGAGTTTCGGCCGGGATaGCCTCGGGGATGGCTGTCAGCCGGCGGCGCCCACAGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GCGCGSAPACEFRPG*PRGWLSAGGAHRPQ Trigger: CTGTGGCCTGTGGGCGCCGCCGGCTGACAGCCATCCCCGAGGGCATCCCGGCCGAAACTCGCATGCTGGAGCTGAGCCGCAACCGCATCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS GCA 90 bp | GTGGTGAGGTCCAGCGGGAACCGGACGCCCACCTGCGTCTCGTTGTaGCCATCGCCCTGGGTCCGGTTGGCGGCCGGCTGGACGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VVRSSGNRTPTCVSL*PSPWVRLAAGWTVK Trigger: CTTGACCGTCCAGCCGGCCGCCAACCGGACCCAGGGCGATGGGCACAACGAGACGCAGGTGGGCGTCCGGTTCCCGCTGGACCTCACCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS GCA 90 bp | TTGCGGCACACGAAGTACTCGAAGAGCACAGAGTCGGGGAGATTGTaGAGGGCGTCGCCGCGCACCTCGGCGGGGGTGGCGCAGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRHTKYSKSTESGRL*RASPRTSAGVAQAG Trigger: CCCCGCCTGCGCCACCCCCGCCGAGGTGCGCGGCGACGCCCTGCACAATCTCCCCGACTCTGTGCTCTTCGAGTACTTCGTGTGCCGCAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGACCTCTAGGGGACATGGGGACATGGCTTCTCCTGGCAGGTGGCCTCCTTCGCCCTGGGTCCGGTaGGCGGCCGGCTGGACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGTSRGHGDMASPGRWPPSPWVR*AAGWTV Trigger: GACCGTCCAGCCGGCCGCCAACCGGACCCAGGGCGA...AGGAGGCCACCTGCCAGGAGAAGCCATGTCCCCATGTCCCCTAGAGGTCCCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGCCCTCCTGCAAGCAGATGTCCAGTATGGCAAGGCAGGGTGGAGGGACTCGCAGGCCAGCGGGTaGCCGTCCACGCGCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPALLQADVQYGKAGWRDSQASG*PSTRSV Trigger: GACGCTGCGCGTGGACGGCAACCCGCTGGCCTGCGA...GTCCCTCCACCCTGCCTTGCCATACTGGACATCTGCTTGCAGGAGGGCTGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS CCA 90 bp | GCCCATCGCCCTGGGTCCGGTTGGCGGCCGGCTGGACGGTCAAGGTaGCGAAATAAGTGTCGTTACCCCCGGCGTTGCTGGCCACACATG | + |
|
Preference number: 5 (lower is better) Translates to: AHRPGSGWRPAGRSR*RNKCRYPRRCWPHM Trigger: CATGTGTGGCCAGCAACGCCGGGGGTAACGACACTTATTTCGCCACCTTGACCGTCCAGCCGGCCGCCAACCGGACCCAGGGCGATGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
||
| CDS CCA 90 bp | GGACGCCCACCTGCGTCTCGTTGTGCCCATCGCCCTGGGTCCGGTTaGCGGCCGGCTGGACGGTCAAGGTGGCGAAATAAGTGTCGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: GRPPASRCAHRPGSG*RPAGRSRWRNKCRY Trigger: GTAACGACACTTATTTCGCCACCTTGACCGTCCAGCCGGCCGCCAACCGGACCCAGGGCGATGGGCACAACGAGACGCAGGTGGGCGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 90 bp | TCCGAAAGGTTGAGCAGGCGGATCTGTCGCAGCCCCACGAAGGCCTaGGGCTCGATGACAGCCAGCAGGGCTCCTGCTAGGTGCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SERLSRRICRSPTKA*GSMTASRAPARCSS Trigger: TGAGCTGCACCTAGCAGGAGCCCTGCTGGCTGTCATCGAGCCGCAGGCCTTCGTGGGGCTGCGACAGATCCGCCTGCTCAACCTTTCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 90 bp | AATAAGTGTCGTTACCCCCGGCGTTGCTGGCCACACATGTGTAGGTaGCACTGTCCTGGGGCCGCGTGTCCGCGATGGTCAGGGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NKCRYPRRCWPHMCR*HCPGAACPRWSGCP Trigger: GGGGCACCCTGACCATCGCGGACACGCGGCCCCAGGACAGTGGCACCTACACATGTGTGGCCAGCAACGCCGGGGGTAACGACACTTATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | CAGCCAGCCCTCCTGCAAGCAGATGTCCAGTATGGCAAGGCAGGGTGGAGGGACGGGTTGTGCGACAGGTaGAGGCACGTGAGGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QPALLQADVQYGKAGWRDGLCDR*RHVRWA Trigger: GGCCCACCTCACGTGCCTCAACCTGTCGCACAACCC...GTCCCTCCACCCTGCCTTGCCATACTGGACATCTGCTTGCAGGAGGGCTGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 90 bp | CCCGGGGCCACCTCCTCCAGCAGCGGCCAGTTGTCGATCTCCAGATaGGAGAGTCCTGGAAGCTTCTGGAAATTCTGGTCCTCCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGATSSSSGQLSISR*ESPGSFWKFWSSRA Trigger: CGCCCTGGAGGACCAGAATTTCCAGAAGCTTCCAGGACTCTCGCATCTGGAGATCGACAACTGGCCGCTGCTGGAGGAGGTGGCCCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 90 bp | GCTGGACGGTCAAGGTGGCGAAATAAGTGTCGTTACCCCCGGCGTTaGTGGCCACACATGTGTAGGTGCCACTGTCCTGGGGCCGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGRSRWRNKCRYPRR*WPHMCRCHCPGAAC Trigger: ACACGCGGCCCCAGGACAGTGGCACCTACACATGTGTGGCCAGCAACGCCGGGGGTAACGACACTTATTTCGCCACCTTGACCGTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 90 bp | TTGTCGATCTCCAGATGCGAGAGTCCTGGAAGCTTCTGGAAATTCTaGTCCTCCAGGGCGGCGATGGCCAGGTGGCGCAGGCGCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSISRCESPGSFWKF*SSRAAMARWRRRRA Trigger: CGCTCTGCGCCTGCGCCACCTGGCCATCGCCGCCCTGGAGGACCAGAATTTCCAGAAGCTTCCAGGACTCTCGCATCTGGAGATCGACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 90 bp | AGCGGCCAGTTGTCGATCTCCAGATGCGAGAGTCCTGGAAGCTTCTaGAAATTCTGGTCCTCCAGGGCGGCGATGGCCAGGTGGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGQLSISRCESPGSF*KFWSSRAAMARWRR Trigger: CCTGCGCCACCTGGCCATCGCCGCCCTGGAGGACCAGAATTTCCAGAAGCTTCCAGGACTCTCGCATCTGGAGATCGACAACTGGCCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | GGTAGCCCTGGGTACCCGAGCAGCGGTGGACAGGAGCTGGGCTGGTGCATTCCCGCAATCACATTATGGTaGAGGTCCAGCTCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPGYPSSGGQELGWCIPAITLW*RSSSSR Trigger: CCTGGAGGAGCTGGACCTCAACCATAATGTGATTGC...GGGAATGCACCAGCCCAGCTCCTGTCCACCGCTGCTCGGGTACCCAGGGCTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS TCA 90 bp | GGAATGTGTTCTCCTCCAGTGTGGACAGCAGGTTGTCCGAAAGGTTaGGCAGGCGGATCTGTCGCAGCCCCACGAAGGCCTGCGGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GMCSPPVWTAGCPKG*AGGSVAAPRRPAAR Trigger: TCGAGCCGCAGGCCTTCGTGGGGCTGCGACAGATCCGCCTGCTCAACCTTTCGGACAACCTGCTGTCCACACTGGAGGAGAACACATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 90 bp | CTCCTCCAGCAGCGGCCAGTTGTCGATCTCCAGATGCGAGAGTCCTaGAAGCTTCTGGAAATTCTGGTCCTCCAGGGCGGCGATGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLQQRPVVDLQMRES*KLLEILVLQGGDGQ Trigger: CTGGCCATCGCCGCCCTGGAGGACCAGAATTTCCAGAAGCTTCCAGGACTCTCGCATCTGGAGATCGACAACTGGCCGCTGCTGGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | CAGCCAGCCCTCCTGCAAGCAGATGTCCAGTATGGCAAGGCAGGGTGGAGGGACGACAGTGATGTGAGATaGCAGCGCTCCAGCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPALLQADVQYGKAGWRDDSDVR*QRSSVS Trigger: GCTCACGCTGGAGCGCTGCAATCTCACATCACTGTC...GTCCCTCCACCCTGCCTTGCCATACTGGACATCTGCTTGCAGGAGGGCTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | TGTCTTAGCACAGCAGCCACAGCAAAGGGTGGGAAAGACACGTTGAAACCCTTACGCAGGCGGGGCAGGTaGGCGAAGGCCCCAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLSTAATAKGGKDTLKPLRRRGR*AKAPGS Trigger: GGAACCTGGGGCCTTCGCCAACCTGCCCCGCCTGCG...TAAGGGTTTCAACGTGTCTTTCCCACCCTTTGCTGTGGCTGCTGTGCTAAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | TGCTCACCCCTACAGCAGTCCACTTTCCCTGTAGAGCAGCAGAGTGGATGTGGTCGCCTCTCCCGGATCTaGGGCTTGCGGCACACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSPLQQSTFPVEQQSGCGRLSRI*GLRHTK Trigger: CTTCGTGTGCCGCAAGCCCAAGATCCGGGAGAGGCG...ACCACATCCACTCTGCTGCTCTACAGGGAAAGTGGACTGCTGTAGGGGTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | TATGAGACACAGGTCACAATGAGCGGAGGAGACAGCCACTGCAAGCACGGTGTGAGACAGCGGATGCGGTaGCGGCTCAGCTCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: YETQVTMSGGDSHCKHGVRQRMR*RLSSSM Trigger: CATGCTGGAGCTGAGCCGCAACCGCATCCGCTGTCT...CACACCGTGCTTGCAGTGGCTGTCTCCTCCGCTCATTGTGACCTGTGTCTCATA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | TGCTCACCCCTACAGCAGTCCACTTTCCCTGTAGAGCAGCAGAGTGGATGTGGTAGGTTGTCCGAAAGGTaGAGCAGGCGGATCTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSPLQQSTFPVEQQSGCGRLSER*SRRICR Trigger: GCGACAGATCCGCCTGCTCAACCTTTCGGACAACCT...ACCACATCCACTCTGCTGCTCTACAGGGAAAGTGGACTGCTGTAGGGGTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | GGACACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTTGTTCTGTCCCGGATCTTGGGCTaGCGGCACACGAAGTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: GHKHEGTQGKGYRLRLVLSRILG*RHTKYS Trigger: CGAGTACTTCGTGTGCCGCAAGCCCAAGATCCGGGA...CAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | GCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTAACTGTGATGAGCTTCAGCTGGTaGCCACGGAGACGCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: AKSHKMPSVPSFNGVLTVMSFSW*PRRRRT Trigger: CGTCCTGCGTCTCCGTGGCAACCAGCTGAAGCTCAT...CACAGTTAGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTGTGGGACTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | GGACACAAACATGAGGGCACACAGGGCAAAGGCTACAGGCTCAGACTTGTTCTGAGCAGGATGACCAGCTaGTTCTCGCTCAGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHKHEGTQGKGYRLRLVLSRMTS*FSLRSS Trigger: GCTGGACCTGAGCGAGAACAAGCTGGTCATCCTGCT...CAGAACAAGTCTGAGCCTGTAGCCTTTGCCCTGTGTGCCCTCATGTTTGTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | TCAGTTGGCCAAGTCCCACAAAATGCCCTCTGTCCCTTCTTTCAACGGTGTCCTTCCAGCAGCGGCCAGTaGTCGATCTCCAGATGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVGQVPQNALCPFFQRCPSSSGQ*SISRCE Trigger: CTCGCATCTGGAGATCGACAACTGGCCGCTGCTGGA...AGGACACCGTTGAAAGAAGGGACAGAGGGCATTTTGTGGGACTTGGCCAACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | TATGAGACACAGGTCACAATGAGCGGAGGAGACAGCCACTGCAAGCACGGTGTGAGTGTGGACAGCAGGTaGTCCGAAAGGTTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YETQVTMSGGDSHCKHGVSVDSR*SERLSR Trigger: CCTGCTCAACCTTTCGGACAACCTGCTGTCCACACT...CACACCGTGCTTGCAGTGGCTGTCTCCTCCGCTCATTGTGACCTGTGTCTCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | TATGAGACACAGGTCACAATGAGCGGAGGAGACAGCCACTGCAAGCACGGTGTGCAGATCATCTTCATGTaGAACTTGCGCGCACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: YETQVTMSGGDSHCKHGVQIIFM*NLRAPP Trigger: GGGTGGTGCGCGCAAGTTCAACATGAAGATGATCTG...CACACCGTGCTTGCAGTGGCTGTCTCCTCCGCTCATTGTGACCTGTGTCTCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS-3UTR CAA 90 bp | TCTGTAAAGGAAGACACAGGGTCCCAGTGGACCACAGACATTACAGCTGGACAGATCTTCATGTTGAACTaGCGCGCACCACCCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVKEDTGSQWTTDITAGQIFMLN*RAPPWP Trigger: TGGCCAGGGTGGTGCGCGCAAGTTCAACATGAAGAT...CTGTCCAGCTGTAATGTCTGTGGTCCACTGGGACCCTGTGTCTTCCTTTACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | CGTGCCCGGCCCCGGCTGGCAGCCGTAACCGAGTGGTaGTGGGGCGTCACCCAGGCTACCGTGGGCGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RARPRLAAVTEW*WGVTQATVGAG Trigger: GCCCGCGCCCACGGTAGCCTGGGTGACGCCCCAGCACCACTCGGTTACGGCTGCCAGCCGGGGCCGGGCACG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | GCCCGGCCCCGGCTGGCAGCCGTAACCGAGTGGTGCTaGGGCGTCACCCAGGCTACCGTGGGCGCGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ARPRLAAVTEWC*GVTQATVGAGS Trigger: TGAGCCCGCGCCCACGGTAGCCTGGGTGACGCCCCAGCACCACTCGGTTACGGCTGCCAGCCGGGGCCGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | ACGCGTGCCCGGCCCCGGCTGGCAGCCGTAACCGAGTaGTGCTGGGGCGTCACCCAGGCTACCGTGGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TRARPRLAAVTE*CWGVTQATVGA Trigger: CGCGCCCACGGTAGCCTGGGTGACGCCCCAGCACCACTCGGTTACGGCTGCCAGCCGGGGCCGGGCACGCGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | GATTGTGCAGGGCGTCGCCGCGCACCTCGGCGGGGGTaGCGCAGGCGGGGAGCCTGCCGTCGAAGTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DCAGRRRAPRRG*RRRGACRRSSG Trigger: CCCTGAACTTCGACGGCAGGCTCCCCGCCTGCGCCACCCCCGCCGAGGTGCGCGGCGACGCCCTGCACAATC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | CGCGCACCTCGGCGGGGGTGGCGCAGGCGGGGAGCCTaGCGTCGAAGTTCAGGGTCTTCCGCCTCTGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: RAPRRGWRRRGA*RRSSGSSASAR Trigger: TCGTGCAGAGGCGGAAGACCCTGAACTTCGACGGCAGGCTCCCCGCCTGCGCCACCCCCGCCGAGGTGCGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | TCCAGCGGGAACCGGACGCCCACCTGCGTCTCGTTGTaGCCATCGCCCTGGGTCCGGTTGGCGGCCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGNRTPTCVSL*PSPWVRLAAGW Trigger: CCAGCCGGCCGCCAACCGGACCCAGGGCGATGGGCACAACGAGACGCAGGTGGGCGTCCGGTTCCCGCTGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 72 bp | AGGTCCAGCGGGAACCGGACGCCCACCTGCGTCTCGTaGTGCCCATCGCCCTGGGTCCGGTTGGCGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSGNRTPTCVS*CPSPWVRLAAG Trigger: GCCGGCCGCCAACCGGACCCAGGGCGATGGGCACAACGAGACGCAGGTGGGCGTCCGGTTCCCGCTGGACCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | TGCGGCTCAGCTCCAGCATGCGAGTTTCGGCCGGGATaGCCTCGGGGATGGCTGTCAGCCGGCGGCGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CGSAPACEFRPG*PRGWLSAGGAH Trigger: GTGGGCGCCGCCGGCTGACAGCCATCCCCGAGGGCATCCCGGCCGAAACTCGCATGCTGGAGCTGAGCCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | CGGACGCCCACCTGCGTCTCGTTGTGCCCATCGCCCTaGGTCCGGTTGGCGGCCGGCTGGACGGTCAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTPTCVSLCPSP*VRLAAGWTVKV Trigger: CACCTTGACCGTCCAGCCGGCCGCCAACCGGACCCAGGGCGATGGGCACAACGAGACGCAGGTGGGCGTCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 90 bp | ATGGTGGTGAGGTCCAGCGGGAACCGGACGCCCACCTGCGTCTCGTaGTGCCCATCGCCCTGGGTCCGGTTGGCGGCCGGCTGGACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MVVRSSGNRTPTCVS*CPSPWVRLAAGWTV Trigger: GACCGTCCAGCCGGCCGCCAACCGGACCCAGGGCGATGGGCACAACGAGACGCAGGTGGGCGTCCGGTTCCCGCTGGACCTCACCACCAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 90 bp | GGCTTGCGGCACACGAAGTACTCGAAGAGCACAGAGTCGGGGAGATaGTGCAGGGCGTCGCCGCGCACCTCGGCGGGGGTGGCGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLRHTKYSKSTESGR*CRASPRTSAGVAQA Trigger: CGCCTGCGCCACCCCCGCCGAGGTGCGCGGCGACGCCCTGCACAATCTCCCCGACTCTGTGCTCTTCGAGTACTTCGTGTGCCGCAAGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | GGGTTGTGCGACAGGTTGAGGCACGTGAGGTGGGCCTaGTGTCGCAGCGCAGCGGCCGGTACAGCCGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GLCDRLRHVRWA*CRSAAAGTAVM Trigger: CATCACGGCTGTACCGGCCGCTGCGCTGCGACAGCAGGCCCACCTCACGTGCCTCAACCTGTCGCACAACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | ACGAAGTACTCGAAGAGCACAGAGTCGGGGAGATTGTaGAGGGCGTCGCCGCGCACCTCGGCGGGGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TKYSKSTESGRL*RASPRTSAGVA Trigger: CGCCACCCCCGCCGAGGTGCGCGGCGACGCCCTGCACAATCTCCCCGACTCTGTGCTCTTCGAGTACTTCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | ATGGTGGTGAGGTCCAGCGGGAACCGGACGCCCACCTaGGTCTCGTTGTGCCCATCGCCCTGGGTCCGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: MVVRSSGNRTPT*VSLCPSPWVRL Trigger: CAACCGGACCCAGGGCGATGGGCACAACGAGACGCAGGTGGGCGTCCGGTTCCCGCTGGACCTCACCACCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | TGCCACGGAGACGCAGGACGCGCAGGCGGGGCAGGTTaGCGAAGGCCCCAGGTTCCACGTGGGCAATCACAT | + |
|
Preference number: 6 (lower is better) Translates to: CHGDAGRAGGAG*RRPQVPRGQSH Trigger: ATGTGATTGCCCACGTGGAACCTGGGGCCTTCGCCAACCTGCCCCGCCTGCGCGTCCTGCGTCTCCGTGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | GAAGCTTCTGGAAATTCTGGTCCTCCAGGGCGGCGATaGCCAGGTGGCGCAGGCGCAGAGCGCCCAAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: EASGNSGPPGRR*PGGAGAERPSP Trigger: GGGGCTTGGGCGCTCTGCGCCTGCGCCACCTGGCCATCGCCGCCCTGGAGGACCAGAATTTCCAGAAGCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | CTGATGGGGTTGTGCGACAGGTTGAGGCACGTGAGGTaGGCCTGCTGTCGCAGCGCAGCGGCCGGTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LMGLCDRLRHVR*ACCRSAAAGTA Trigger: GGCTGTACCGGCCGCTGCGCTGCGACAGCAGGCCCACCTCACGTGCCTCAACCTGTCGCACAACCCCATCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 72 bp | GAGGCCAGGTCCCCAGGGTTCAGACAGCGGATGCGGTaGCGGCTCAGCTCCAGCATGCGAGTTTCGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: EARSPGFRQRMR*RLSSSMRVSAG Trigger: CCCGGCCGAAACTCGCATGCTGGAGCTGAGCCGCAACCGCATCCGCTGTCTGAACCCTGGGGACCTGGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 72 bp | TTGCCACGGAGACGCAGGACGCGCAGGCGGGGCAGGTaGGCGAAGGCCCCAGGTTCCACGTGGGCAATCACA | + |
|
Preference number: 6 (lower is better) Translates to: LPRRRRTRRRGR*AKAPGSTWAIT Trigger: TGTGATTGCCCACGTGGAACCTGGGGCCTTCGCCAACCTGCCCCGCCTGCGCGTCCTGCGTCTCCGTGGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | AGGCCAGGTCCCCAGGGTTCAGACAGCGGATGCGGTTaGGGCTCAGCTCCAGCATGCGAGTTTCGGCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RPGPQGSDSGCG*GSAPACEFRPG Trigger: TCCCGGCCGAAACTCGCATGCTGGAGCTGAGCCGCAACCGCATCCGCTGTCTGAACCCTGGGGACCTGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | TTGAGCAGGCGGATCTGTCGCAGCCCCACGAAGGCCTaGGGCTCGATGACAGCCAGCAGGGCTCCTGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRRICRSPTKA*GSMTASRAPAR Trigger: CCTAGCAGGAGCCCTGCTGGCTGTCATCGAGCCGCAGGCCTTCGTGGGGCTGCGACAGATCCGCCTGCTCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | CGTTACCCCCGGCGTTGCTGGCCACACATGTGTAGGTaGCACTGTCCTGGGGCCGCGTGTCCGCGATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RYPRRCWPHMCR*HCPGAACPRWS Trigger: TGACCATCGCGGACACGCGGCCCCAGGACAGTGGCACCTACACATGTGTGGCCAGCAACGCCGGGGGTAACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | CCTGGGTCCGGTTGGCGGCCGGCTGGACGGTCAAGGTaGCGAAATAAGTGTCGTTACCCCCGGCGTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSGWRPAGRSR*RNKCRYPRRCW Trigger: CCAGCAACGCCGGGGGTAACGACACTTATTTCGCCACCTTGACCGTCCAGCCGGCCGCCAACCGGACCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | CCTGCGTCTCGTTGTGCCCATCGCCCTGGGTCCGGTTaGCGGCCGGCTGGACGGTCAAGGTGGCGAAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: PASRCAHRPGSG*RPAGRSRWRNK Trigger: CTTATTTCGCCACCTTGACCGTCCAGCCGGCCGCCAACCGGACCCAGGGCGATGGGCACAACGAGACGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 72 bp | CACACGAAGTACTCGAAGAGCACAGAGTCGGGGAGATaGTGCAGGGCGTCGCCGCGCACCTCGGCGGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HTKYSKSTESGR*CRASPRTSAGV Trigger: CACCCCCGCCGAGGTGCGCGGCGACGCCCTGCACAATCTCCCCGACTCTGTGCTCTTCGAGTACTTCGTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 90 bp | CGCACCAGGTCTCTGAAGGAGCCGCGTGGCACCATGCTGATGGGGTaGTGCGACAGGTTGAGGCACGTGAGGTGGGCCTGCTGTCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RTRSLKEPRGTMLMG*CDRLRHVRWACCRS Trigger: GCTGCGACAGCAGGCCCACCTCACGTGCCTCAACCTGTCGCACAACCCCATCAGCATGGTGCCACGCGGCTCCTTCAGAGACCTGGTGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS TCA 72 bp | CAAGCCCCGCAGGTGACCCAGCGACTCCGGGGACAGTaGTGTGAGATTGCAGCGCTCCAGCGTGAGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: QAPQVTQRLRGQ*CEIAALQRELS Trigger: GCTGAGCTCACGCTGGAGCGCTGCAATCTCACATCACTGTCCCCGGAGTCGCTGGGTCACCTGCGGGGCTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | GCAACGAGGCCAGGTCCCCAGGGTTCAGACAGCGGATaGGGTTGCGGCTCAGCTCCAGCATGCGAGTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: ATRPGPQGSDSG*GCGSAPACEFR Trigger: CCGAAACTCGCATGCTGGAGCTGAGCCGCAACCGCATCCGCTGTCTGAACCCTGGGGACCTGGCCTCGTTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 72 bp | TCTCTGAAGGAGCCGCGTGGCACCATGCTGATGGGGTaGTGCGACAGGTTGAGGCACGTGAGGTGGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLKEPRGTMLMG*CDRLRHVRWAC Trigger: GCAGGCCCACCTCACGTGCCTCAACCTGTCGCACAACCCCATCAGCATGGTGCCACGCGGCTCCTTCAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 90 bp | TTCAGCTGGTTGCCACGGAGACGCAGGACGCGCAGGCGGGGCAGGTaGGCGAAGGCCCCAGGTTCCACGTGGGCAATCACATTATGGTTG | + |
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Preference number: 6 (lower is better) Translates to: FSWLPRRRRTRRRGR*AKAPGSTWAITLWL Trigger: CAACCATAATGTGATTGCCCACGTGGAACCTGGGGCCTTCGCCAACCTGCCCCGCCTGCGCGTCCTGCGTCTCCGTGGCAACCAGCTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CCA 72 bp | TCCAGATGCGAGAGTCCTGGAAGCTTCTGGAAATTCTaGTCCTCCAGGGCGGCGATGGCCAGGTGGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRCESPGSFWKF*SSRAAMARWRR Trigger: CCTGCGCCACCTGGCCATCGCCGCCCTGGAGGACCAGAATTTCCAGAAGCTTCCAGGACTCTCGCATCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS TCA 72 bp | TCTCCTCCAGTGTGGACAGCAGGTTGTCCGAAAGGTTaGGCAGGCGGATCTGTCGCAGCCCCACGAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPPVWTAGCPKG*AGGSVAAPRRP Trigger: AGGCCTTCGTGGGGCTGCGACAGATCCGCCTGCTCAACCTTTCGGACAACCTGCTGTCCACACTGGAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 72 bp | TGCTGTCGCAGCGCAGCGGCCGGTACAGCCGTGATGTaGGTGTGTGTGATGGACAACGACGTGAGGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CCRSAAAGTAVM*VCVMDNDVRFS Trigger: GCTGAACCTCACGTCGTTGTCCATCACACACACCAACATCACGGCTGTACCGGCCGCTGCGCTGCGACAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS GCA 72 bp | TTACGGAAGGAATATTCCACAGAGAAGTTATTCTTGTaGTGTCCGCGGCCACGGCTCCACACAAAAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LRKEYSTEKLFL*CPRPRLHTKSS Trigger: GCTGCTTTTTGTGTGGAGCCGTGGCCGCGGACAGCACAAGAATAACTTCTCTGTGGAATATTCCTTCCGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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| CDS CAA 72 bp | ACCTTACGGAAGGAATATTCCACAGAGAAGTTATTCTaGTGCTGTCCGCGGCCACGGCTCCACACAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: TLRKEYSTEKLF*CCPRPRLHTKS Trigger: GCTTTTTGTGTGGAGCCGTGGCCGCGGACAGCACAAGAATAACTTCTCTGTGGAATATTCCTTCCGTAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053986.9 |
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