RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINGO1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049556

Ensembl transcript IDs: ENSMUST00000053568.2, ENSMUST00000114247.2, ENSMUST00000114256.2, ENSMUST00000210032.2

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGAGCTGGGACCAGAGGAGAGGAATCGGCCTGCCTCTGGCTCCTaGCTCTTTCCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCC +
Preference number: 1 (lower is better)
Translates to: AELGPEERNRPASGS*LFPLTVLFPRRTPA
Trigger: GGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGGAAAGAGTCAGGAGCCAGAGGCAGGCCGATTCCTCTCCTCTGGTCCCAGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR CCA 90 bp CGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGTCCTCAGGCCTaGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGCG +
Preference number: 1 (lower is better)
Translates to: RLCQLWPLCRWGPQA*PSEILVEGGQAVRA
Trigger: CGCCCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCACCTGCACAGGGGCCAGAGTTGACAAAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR TCA 90 bp GAGGCCCAAGAGGGGCCAGCGACCTGCAAGGAGGTCACACAACAGTaGGCAGCAGAGCTGGGACCAGAGGAGAGGAATCGGCCTGCCTCT +
Preference number: 1 (lower is better)
Translates to: EAQEGPATCKEVTQQ*AAELGPEERNRPAS
Trigger: AGAGGCAGGCCGATTCCTCTCCTCTGGTCCCAGCTCTGCTGCTCACTGTTGTGTGACCTCCTTGCAGGTCGCTGGCCCCTCTTGGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR CCA 90 bp GGCCAGCGACCTGCAAGGAGGTCACACAACAGTGAGCAGCAGAGCTaGGACCAGAGGAGAGGAATCGGCCTGCCTCTGGCTCCTGACTCT +
Preference number: 1 (lower is better)
Translates to: GQRPARRSHNSEQQS*DQRRGIGLPLAPDS
Trigger: AGAGTCAGGAGCCAGAGGCAGGCCGATTCCTCTCCTCTGGTCCCAGCTCTGCTGCTCACTGTTGTGTGACCTCCTTGCAGGTCGCTGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR TCA 90 bp CAGAGGAGAGGAATCGGCCTGCCTCTGGCTCCTGACTCTTTCCACTaGCCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCA +
Preference number: 1 (lower is better)
Translates to: QRRGIGLPLAPDSFH*PCCSPGGPQPIPVS
Trigger: TGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGGAAAGAGTCAGGAGCCAGAGGCAGGCCGATTCCTCTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR CCA 90 bp CGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTaGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGG +
Preference number: 1 (lower is better)
Translates to: RVLVRRLCQLWPLCR*GPQAWPSEILVEGG
Trigger: CCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTaGAGGTGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAA +
Preference number: 1 (lower is better)
Translates to: LCRVLVRRLCQLWPL*RWGPQAWPSEILVE
Trigger: TTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR CCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACTGGCCCCTGTGCAGGTaGGGTCCTCAGGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHWPLCR*GPQAWP
Trigger: AGGCCAGGCCTGAGGACCCCACCTGCACAGGGGCCA...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR TCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTAAGGAGGGCAGGCGGTaGGGGCGAGGCGAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGKEGRR*GRGECG
Trigger: CCCACACTCGCCTCGCCCTCACCGCCTGCCCTCCTT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR TCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAAAGGAGGGCAGGCGGTaGGGGCGAGGCGAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRKEGRR*GRGECG
Trigger: CCCACACTCGCCTCGCCCTCACCGCCTGCCCTCCTT...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGCGAGGCGAGTGTaGGGAGGGGGAGAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVRARRV*GGGECV
Trigger: CACACACTCTCCCCCTCCCCACACTCGCCTCGCCCT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAGGGCGAGGCGAGTGTaGGGAGGGGGAGAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWRARRV*GGGECV
Trigger: CACACACTCTCCCCCTCCCCACACTCGCCTCGCCCT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR GCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACGCCAGGCACCTTCCCTaGCCAGTGTTTCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHARHLP*PVFPLR
Trigger: CCTCAGTGGAAACACTGGGCAGGGAAGGTGCCTGGC...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTAGGGCGAGGCGAGTGTaGGGAGGGGGAGAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGRARRV*GGGECV
Trigger: CACACACTCTCCCCCTCCCCACACTCGCCTCGCCCT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCCAGGCACCTTCCCTaGCCAGTGTTTCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGARHLP*PVFPLR
Trigger: CCTCAGTGGAAACACTGGGCAGGGAAGGTGCCTGGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR TCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACCTTGGTAGTGCTGCCTaGCATCCAGCAGACAAACCC +
Preference number: 2 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHLGSAA*HPADKP
Trigger: GGGTTTGTCTGCTGGATGTCAGGCAGCACTACCAAG...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCCAGGCACCTTCCCTaGCCAGTGTTTCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGARHLP*PVFPLR
Trigger: CCTCAGTGGAAACACTGGGCAGGGAAGGTGCCTGGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR CCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACGACTCTGCCGCGTGTTaGTTCGTCGGCTTTGTCAAC +
Preference number: 2 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHDSAAC*FVGFVN
Trigger: GTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGTCAGGCCTGGCCTTCTaGAATCCTGGTAGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGSGLAF*NPGRRR
Trigger: CCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGA...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR TCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGTCAGGCCTGGCCTTCTaGAATCCTGGTAGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVSGLAF*NPGRRR
Trigger: CCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGA...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR-3UTR CCA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTAGGGCGAGGCGAGTGTaGGGAGGGGGAGAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIRARRV*GGGECV
Trigger: CACACACTCTCCCCCTCCCCACACTCGCCTCGCCCT...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR CCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGGAGTGGGCCAGAGGGTaGGGCTGGAATCTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: EVGRAGINVPICTDVETEEWARG*GWNLLP
Trigger: GGGAAGGAGATTCCAGCCCCACCCTCTGGCCCACTC...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR TCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGCCTGCCTCTGGCTCCTaGCTCTTTCCACTGACCGTG +
Preference number: 2 (lower is better)
Translates to: EVGRAGINVPICTDVETEPASGS*LFPLTV
Trigger: CACGGTCAGTGGAAAGAGTCAGGAGCCAGAGGCAGG...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR CCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGGGCCTGGAGCTGAGCTaGCACCCATGGCTCCAAATG +
Preference number: 2 (lower is better)
Translates to: EVGRAGINVPICTDVETEGLELS*HPWLQM
Trigger: CATTTGGAGCCATGGGTGCCAGCTCAGCTCCAGGCC...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR GCA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTGCCAGGCACCTTCCCTaGCCAGTGTTTCCACTGAGG +
Preference number: 2 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIARHLP*PVFPLR
Trigger: CCTCAGTGGAAACACTGGGCAGGGAAGGTGCCTGGC...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR TCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGTCAGGCCTGGCCTTCTaGAATCCTGGTAGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSGLAF*NPGRRR
Trigger: CCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGA...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
3UTR CAA 90 bp AGAGGAGGAAGAGGAGGAGGAGGAAGAGAAAAACAAGAAACTGAGTaGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATT +
Preference number: 2 (lower is better)
Translates to: RGGRGGGGREKQETE*EEGPGAIRTSKVCI
Trigger: AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTTTTCTCTTCCTCCTCCTCCTCTTCCTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR TCA 72 bp GGAATCGGCCTGCCTCTGGCTCCTGACTCTTTCCACTaGCCGTGCTGTTCCCCAGGAGGACCCCAGCCCATC +
Preference number: 3 (lower is better)
Translates to: GIGLPLAPDSFH*PCCSPGGPQPI
Trigger: GATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGGAAAGAGTCAGGAGCCAGAGGCAGGCCGATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR TCA 72 bp GGACCAGAGGAGAGGAATCGGCCTGCCTCTGGCTCCTaGCTCTTTCCACTGACCGTGCTGTTCCCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: GPEERNRPASGS*LFPLTVLFPRR
Trigger: CCTCCTGGGGAACAGCACGGTCAGTGGAAAGAGTCAGGAGCCAGAGGCAGGCCGATTCCTCTCCTCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR TCA 72 bp GAGGGGCCAGCGACCTGCAAGGAGGTCACACAACAGTaGGCAGCAGAGCTGGGACCAGAGGAGAGGAATCGG +
Preference number: 3 (lower is better)
Translates to: EGPATCKEVTQQ*AAELGPEERNR
Trigger: CCGATTCCTCTCCTCTGGTCCCAGCTCTGCTGCTCACTGTTGTGTGACCTCCTTGCAGGTCGCTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR CCA 72 bp AGAGCTGGGACCAGAGGAGAGGAATCGGCCTGCCTCTaGCTCCTGACTCTTTCCACTGACCGTGCTGTTCCC +
Preference number: 3 (lower is better)
Translates to: RAGTRGEESACL*LLTLSTDRAVP
Trigger: GGGAACAGCACGGTCAGTGGAAAGAGTCAGGAGCCAGAGGCAGGCCGATTCCTCTCCTCTGGTCCCAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR CCA 72 bp CCTGCAAGGAGGTCACACAACAGTGAGCAGCAGAGCTaGGACCAGAGGAGAGGAATCGGCCTGCCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: PARRSHNSEQQS*DQRRGIGLPLA
Trigger: AGCCAGAGGCAGGCCGATTCCTCTCCTCTGGTCCCAGCTCTGCTGCTCACTGTTGTGTGACCTCCTTGCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
3UTR-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACAAACAAGAAACTGAGTaGGAAGAAGGCCCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHKQETE*EEGPGA
Trigger: GGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACGGCTCGGTCCTGCGCTaGGCACTCGCAGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHGSVLR*ALAAGR
Trigger: CCGCCCCGCTGCGAGTGCTCAGCGCAGGACCGAGCC...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGGCTCGGTCCTGCGCTaGGCACTCGCAGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVGSVLR*ALAAGR
Trigger: CCGCCCCGCTGCGAGTGCTCAGCGCAGGACCGAGCC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCTCGGTCCTGCGCTaGGCACTCGCAGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWGSVLR*ALAAGR
Trigger: CCGCCCCGCTGCGAGTGCTCAGCGCAGGACCGAGCC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGATGAGGCCGTGCAGGTaGGAGAGCGCCTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLMRPCR*ESASVG
Trigger: CCCCACGGAGGCGCTCTCCCACCTGCACGGCCTCAT...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGAGGACGATGAGGCCGTaGAGGTGGGAGAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLRTMRP*RWESAS
Trigger: GGAGGCGCTCTCCCACCTGCACGGCCTCATCGTCCT...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGGGGCCCGGCGGCAGGTaGAGTAGTTGGGTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLGPGGR*SSWVGV
Trigger: TACTCCTACCCAACTACTTCACCTGCCGCCGGGCCC...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACTCCACCACGGCCAGCTaGCCGCCCACCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHSTTAS*PPTSWI
Trigger: GATCCAGCTGGTGGGCGGGCAGCTGGCCGTGGTGGA...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGGCCGCCAGCATTGGCTaGGATGCACAGGTACGTGCC +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLAASIG*DAQVRA
Trigger: GGCACGTACCTGTGCATCGCAGCCAATGCTGGCGGC...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGCACCGAATGGAAGGCTaGCTCCTCCAGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLHRMEG*LLQGGQ
Trigger: CTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTG...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCAGGCGAGTCTCGGTaGGGATGCCCTCGGGCACCG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVAGESR*GCPRAP
Trigger: CGGTGCCCGAGGGCATCCCCACCGAGACTCGCCTGC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGATGAGGCCGTGCAGGTaGGAGAGCGCCTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVMRPCR*ESASVG
Trigger: CCCCACGGAGGCGCTCTCCCACCTGCACGGCCTCAT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGGGCCGTAGAGGCAGTTaGGGGTCATGGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLGRRGS*GSWCPG
Trigger: ACCTGGACACCATGACCCCCAACTGCCTCTACGGCC...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGTTGCGGTCCCGGATGTaGGCCCGGCGGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVLRSRM*ARRQVK
Trigger: CTTCACCTGCCGCCGGGCCCACATCCGGGACCGCAA...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGTTGCGGTCCCGGATGTaGGCCCGGCGGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGLRSRM*ARRQVK
Trigger: CTTCACCTGCCGCCGGGCCCACATCCGGGACCGCAA...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGTGGCGCGGGTGCTGTTaGCCTCTCCCTCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRWRGCC*PLPRLA
Trigger: AGCCAGGCGAGGGAGAGGCCAACAGCACCCGCGCCA...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGTGGCGCGGGTGCTGTTaGCCTCTCCCTCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGWRGCC*PLPRLA
Trigger: AGCCAGGCGAGGGAGAGGCCAACAGCACCCGCGCCA...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACGGGCCCGGCGGCAGGTaGAGTAGTTGGGTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHGPGGR*SSWVGV
Trigger: TACTCCTACCCAACTACTTCACCTGCCGCCGGGCCC...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGAAGGTCTTGTTGGGTTaGTGGGGCCAGTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLKVLLG*WGQSGE
Trigger: CTCGCCTGACTGGCCCCATCAACCCAACAAGACCTT...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCGGGGTGCATCAGCTaGGCTGATGCCTGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWAGCIS*ADACVR
Trigger: TCGGACGCAGGCATCAGCTCAGCTGATGCACCCCGC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTAGCAGGAGGATGGGCTaGCAGCAGGCCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGSRRMG*QQARRG
Trigger: CCCCCTCCTGGCCTGCTGGCAGCCCATCCTCCTGCT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGAGCAGGAGGATGGGCTaGCAGCAGGCCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVSRRMG*QQARRG
Trigger: CCCCCTCCTGGCCTGCTGGCAGCCCATCCTCCTGCT...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGAGTCTCGGTGGGGATaGCCTCGGGCACCGCCACAA +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWESRWG*PRAPPQ
Trigger: TTGTGGCGGTGCCCGAGGGCATCCCCACCGAGACTC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGAGTCTCGGTGGGGATaGCCTCGGGCACCGCCACAA +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVESRWG*PRAPPQ
Trigger: TTGTGGCGGTGCCCGAGGGCATCCCCACCGAGACTC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGACGATGAGGCCGTaGAGGTGGGAGAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVRTMRP*RWESAS
Trigger: GGAGGCGCTCTCCCACCTGCACGGCCTCATCGTCCT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGACCAGCTGGATCTCCTaGAACCGCAGCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLTSWIS*NRSSSC
Trigger: GCATGAGCTGCTGCGGTTGCAGGAGATCCAGCTGGT...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTTCCACCACGGCCAGCTaGCCGCCCACCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGSTTAS*PPTSWI
Trigger: GATCCAGCTGGTGGGCGGGCAGCTGGCCGTGGTGGA...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGACACCTGCTGTGCCTTaGGGTCCCGGATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGTPAVP*GPGCGP
Trigger: GGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGACACCTGCTGTGCCTTaGGGTCCCGGATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVTPAVP*GPGCGP
Trigger: GGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGTTGGCCGAGACCAAGTaGTTGCGGGGTGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLLAETK*LRGESQ
Trigger: TTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAA...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTGCCCGCCCACCAGCTaGATCTCCTGCAACCGCAGC +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWCPPTS*ISCNRS
Trigger: GCTGCGGTTGCAGGAGATCCAGCTGGTGGGCGGGCA...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGTGCCCGCCCACCAGCTaGATCTCCTGCAACCGCAGC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVCPPTS*ISCNRS
Trigger: GCTGCGGTTGCAGGAGATCCAGCTGGTGGGCGGGCA...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGGACGAACTCAGGTGTaGCGCAGGTGGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGGRTQV*RRWAAA
Trigger: GGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTTTGCGGTCCCGGATGTaGGCCCGGCGGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGLRSRM*ARRQVK
Trigger: CTTCACCTGCCGCCGGGCCCACATCCGGGACCGCAA...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGGCCCGGCGGCAGGTaGAGTAGTTGGGTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWGPGGR*SSWVGV
Trigger: TACTCCTACCCAACTACTTCACCTGCCGCCGGGCCC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGGGCCCGGCGGCAGGTaGAGTAGTTGGGTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGGPGGR*SSWVGV
Trigger: TACTCCTACCCAACTACTTCACCTGCCGCCGGGCCC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCGGGGTGCATCAGCTaGGCTGATGCCTGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVAGCIS*ADACVR
Trigger: TCGGACGCAGGCATCAGCTCAGCTGATGCACCCCGC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCCGCCACAAAGCGTTTaGGGTGGCAGAGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVPPQSV*GGRARL
Trigger: GAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGCCGCCACAAAGCGTTTaGGGTGGCAGAGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRPPQSV*GGRARL
Trigger: GAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGG...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGAACCGCAGCAGCTCATaGAGCATGGAGCCCTCGATT +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLNRSSS*SMEPSI
Trigger: AATCGAGGGCTCCATGCTGCATGAGCTGCTGCGGTT...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCGCAGGTGGGCTGCTaGCTGTTGAAGTTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGAQVGC*LLKLSR
Trigger: GCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGCGCAGGTGGGCTGCTaGCTGTTGAAGTTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVAQVGC*LLKLSR
Trigger: GCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTACACCTGCTGTGCCTTaGGGTCCCGGATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGTPAVP*GPGCGP
Trigger: GGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGCGGGCATGGAGTCGTTaGCGCCAGCATTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRRAWSR*RQHWLR
Trigger: TCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCG...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCGGGCATGGAGTCGTTaGCGCCAGCATTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGRAWSR*RQHWLR
Trigger: TCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGAGGCCAGGAGGGGGCTaGGCATGCTTCTCATACCCC +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGRPGGG*ACFSYP
Trigger: GGGGTATGAGAAGCATGCCCAGCCCCCTCCTGGCCT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAGGCCAGGAGGGGGCTaGGCATGCTTCTCATACCCC +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWRPGGG*ACFSYP
Trigger: GGGGTATGAGAAGCATGCCCAGCCCCCTCCTGGCCT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGGCGCCTCCGTGGGGATaGAGGTCAGATTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLAPPWG*RSDCIS
Trigger: AGAAATGCAATCTGACCTCCATCCCCACGGAGGCGC...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGGAGAGCGCCTCCGTaGGGATGGAGGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWGRAPP*GWRSDC
Trigger: GCAATCTGACCTCCATCCCCACGGAGGCGCTCTCCC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAATGAGGCCGTGCAGGTaGGAGAGCGCCTCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRMRPCR*ESASVG
Trigger: CCCCACGGAGGCGCTCTCCCACCTGCACGGCCTCAT...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGTCCAGGGTGGTCAGCTaGTTGCCAGAGACATTGAGC +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLSRVVS*LPETLS
Trigger: GCTCAATGTCTCTGGCAACCAGCTGACCACCCTGGA...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGACGAACTCAGGTGTaGCGCAGGTGGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGGRTQV*RRWAAA
Trigger: GGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACCCAAAGGATAGCTGGTaGAGGGTCGCCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHPKDSW*RVAICP
Trigger: CGGGCAGATGGCGACCCTCCACCAGCTATCCTTTGG...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACCGTTGCCGCCAGCATTaGCTGCGATGCACAGGTACG +
Preference number: 4 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHRCRQH*LRCTGT
Trigger: CGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACG...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCAAGTGGGCGGGCATaGAGTCGTTGCCGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWASGRA*SRCRQH
Trigger: ATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGCAAGTGGGCGGGCATaGAGTCGTTGCCGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVASGRA*SRCRQH
Trigger: ATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGCAAGTGGGCGGGCATaGAGTCGTTGCCGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRASGRA*SRCRQH
Trigger: ATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGGCCTCTCCCTCGCCTaGCTGGTTGGAGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRGLSLA*LVGDEG
Trigger: GCCTTCATCTCCAACCAGCCAGGCGAGGGAGAGGCC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGGCCTCTCCCTCGCCTaGCTGGTTGGAGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVGLSLA*LVGDEG
Trigger: GCCTTCATCTCCAACCAGCCAGGCGAGGGAGAGGCC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCCTCTCCCTCGCCTaGCTGGTTGGAGATGAAGGC +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWGLSLA*LVGDEG
Trigger: GCCTTCATCTCCAACCAGCCAGGCGAGGGAGAGGCC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCACCGAATGGAAGGCTaGCTCCTCCAGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWHRMEG*LLQGGQ
Trigger: CTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTG...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCCGCCACAAAGCGTTTaGGGTGGCAGAGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVPPQSV*GGRARL
Trigger: GAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGG...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCGCAGGTGGGCTGCTaGCTGTTGAAGTTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGAQVGC*LLKLSR
Trigger: GCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCGCAGGTGGGCTGCTaGCTGTTGAAGTTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVAQVGC*LLKLSR
Trigger: GCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGTGGCGCAGGTGGGCTaGTGCCTGTTGAAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVVAQVG*CLLKLS
Trigger: GCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCAC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCGGGCATGGAGTCGTTaGCGCCAGCATTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGRAWSR*RQHWLR
Trigger: TCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAGTCAGGCGAGTAGCTaGGCACATGCAAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWSQASS*AHASGR
Trigger: CCGCCCACTTGCATGTGCGCAGCTACTCGCCTGACT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTAGGCCAGGAGGGGGCTaGGCATGCTTCTCATACCCC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGRPGGG*ACFSYP
Trigger: GGGGTATGAGAAGCATGCCCAGCCCCCTCCTGGCCT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGTTGTTGAAGGCGCCTaGCTCCACGGCGCTCACGAT +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRVVEGA*LHGAHD
Trigger: ATCGTGAGCGCCGTGGAGCCAGGCGCCTTCAACAAC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGTTGTTGAAGGCGCCTaGCTCCACGGCGCTCACGAT +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWVVEGA*LHGAHD
Trigger: ATCGTGAGCGCCGTGGAGCCAGGCGCCTTCAACAAC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGTTGTTGAAGGCGCCTaGCTCCACGGCGCTCACGAT +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGVVEGA*LHGAHD
Trigger: ATCGTGAGCGCCGTGGAGCCAGGCGCCTTCAACAAC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGAGAGCGCCTCCGTaGGGATGGAGGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVGRAPP*GWRSDC
Trigger: GCAATCTGACCTCCATCCCCACGGAGGCGCTCTCCC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGGCAGTTGGGGGTCATaGTGTCCAGGTAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRGSWGS*CPGRAS
Trigger: ACTGGCCCTACCTGGACACCATGACCCCCAACTGCC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGGCAGTTGGGGGTCATaGTGTCCAGGTAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGGSWGS*CPGRAS
Trigger: ACTGGCCCTACCTGGACACCATGACCCCCAACTGCC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGGCCGTAGAGGCAGTTaGGGGTCATGGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGGRRGS*GSWCPG
Trigger: ACCTGGACACCATGACCCCCAACTGCCTCTACGGCC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGGCCGTAGAGGCAGTTaGGGGTCATGGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVGRRGS*GSWCPG
Trigger: ACCTGGACACCATGACCCCCAACTGCCTCTACGGCC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACCTGACTCCTCCAGGGTaGTCAGCTGGTTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHLTPPG*SAGCQR
Trigger: TCTCTGGCAACCAGCTGACCACCCTGGAGGAGTCAG...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCCAAAGGATAGCTGGTaGAGGGTCGCCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGPKDSW*RVAICP
Trigger: CGGGCAGATGGCGACCCTCCACCAGCTATCCTTTGG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCCGCCCATTGCTCTTaGCCGAGACCAAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWAAHCS*PRPSAC
Trigger: GCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCGTTGCCGCCAGCATTaGCTGCGATGCACAGGTACG +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWRCRQH*LRCTGT
Trigger: CGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACG...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCAAGTGGGCGGGCATaGAGTCGTTGCCGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGASGRA*SRCRQH
Trigger: ATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCTGCGCACATGCAAGTaGGCGGGCATGGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVLRTCK*AGMESL
Trigger: CAACGACTCCATGCCCGCCCACTTGCATGTGCGCAG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCACACGCAGGTAGTTaGGCCCACGAAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGAHAGS*AHERHR
Trigger: CCTATGCCTTTCGTGGGCTCAACTACCTGCGTGTGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCACCGAATGGAAGGCTaGCTCCTCCAGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVHRMEG*LLQGGQ
Trigger: CTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTG...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGCAAGTGCTTGCGGGGTaGGAGCCAAAGGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRQVLAG*EPKDSW
Trigger: CCAGCTATCCTTTGGCTCTCACCCCGCAAGCACTTG...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCATCAGGGAAGACTGTaGGCCGCCCATTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWHQGRL*AAHCSW
Trigger: CCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATG...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCATCAGGGAAGACTGTaGGCCGCCCATTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGHQGRL*AAHCSW
Trigger: CCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAAGGTCTTGTTGGGTTaGTGGGGCCAGTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWKVLLG*WGQSGE
Trigger: CTCGCCTGACTGGCCCCATCAACCCAACAAGACCTT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGAAGGTCTTGTTGGGTTaGTGGGGCCAGTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGKVLLG*WGQSGE
Trigger: CTCGCCTGACTGGCCCCATCAACCCAACAAGACCTT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAAGGTCTTGTTGGGTTaGTGGGGCCAGTCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVKVLLG*WGQSGE
Trigger: CTCGCCTGACTGGCCCCATCAACCCAACAAGACCTT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGTGCATCAGCTGAGCTaGTGCCTGCGTCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVVHQLS*CLRPIS
Trigger: GGAAATCGGACGCAGGCATCAGCTCAGCTGATGCAC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGTGCATCAGCTGAGCTaGTGCCTGCGTCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWVHQLS*CLRPIS
Trigger: GGAAATCGGACGCAGGCATCAGCTCAGCTGATGCAC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGTGCATCAGCTGAGCTaGTGCCTGCGTCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGVHQLS*CLRPIS
Trigger: GGAAATCGGACGCAGGCATCAGCTCAGCTGATGCAC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGGGATGGAGGTCAGATTaGATTTCTCCAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLGWRSD*ISPASA
Trigger: AGCTGACGCTGGAGAAATGCAATCTGACCTCCATCC...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGACCAGCTGGATCTCCTaGAACCGCAGCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGTSWIS*NRSSSC
Trigger: GCATGAGCTGCTGCGGTTGCAGGAGATCCAGCTGGT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGTGGCGCAGGTGGGCTaGTGCCTGTTGAAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGVAQVG*CLLKLS
Trigger: GCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCAC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTGGCGCAGGTGGGCTaGTGCCTGTTGAAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVVAQVG*CLLKLS
Trigger: GCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCAC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACTACAAACACCTGCTGTaGCTTGCGGTCCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHYKHLL*LAVPDV
Trigger: CACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTA...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCCCGGCATACAAACTaGACCGTGTGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGARHTN*TVWPSS
Trigger: AGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGCCCGGCATACAAACTaGACCGTGTGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRARHTN*TVWPSS
Trigger: AGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTTGGCCGAGACCAAGTaGTTGCGGGGTGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWLAETK*LRGESQ
Trigger: TTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAA...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGTTGGCCGAGACCAAGTaGTTGCGGGGTGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVLAETK*LRGESQ
Trigger: TTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAA...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCGATGCACAGGTACGTaGCGTTGTCCTGTACCTGGG +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWRCTGT*RCPVPG
Trigger: CCCAGGTACAGGACAACGGCACGTACCTGTGCATCG...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGCGATGCACAGGTACGTaGCGTTGTCCTGTACCTGGG +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRRCTGT*RCPVPG
Trigger: CCCAGGTACAGGACAACGGCACGTACCTGTGCATCG...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGAGTCAGGCGAGTAGCTaGGCACATGCAAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVSQASS*AHASGR
Trigger: CCGCCCACTTGCATGTGCGCAGCTACTCGCCTGACT...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAAGGCCAGGAGGGGGCTaGGCATGCTTCTCATACCCC +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRRPGGG*ACFSYP
Trigger: GGGGTATGAGAAGCATGCCCAGCCCCCTCCTGGCCT...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAGGGAGAGCGCCTCCGTaGGGATGGAGGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRGRAPP*GWRSDC
Trigger: GCAATCTGACCTCCATCCCCACGGAGGCGCTCTCCC...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGCTGACTCCTCCAGGGTaGTCAGCTGGTTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRLTPPG*SAGCQR
Trigger: TCTCTGGCAACCAGCTGACCACCCTGGAGGAGTCAG...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCTGACTCCTCCAGGGTaGTCAGCTGGTTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGLTPPG*SAGCQR
Trigger: TCTCTGGCAACCAGCTGACCACCCTGGAGGAGTCAG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCTGACTCCTCCAGGGTaGTCAGCTGGTTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWLTPPG*SAGCQR
Trigger: TCTCTGGCAACCAGCTGACCACCCTGGAGGAGTCAG...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGAGGTTGCCCACCGAATaGAAGGCTGACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRRLPTE*KADSSR
Trigger: CCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGCAGTCACAGGCCAGTaGGTTGGAGTCCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVAVTGQ*VGVQDE
Trigger: CTCATCCTGGACTCCAACCCACTGGCCTGTGACTGC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCCAAAGGATAGCTGGTaGAGGGTCGCCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGPKDSW*RVAICP
Trigger: CGGGCAGATGGCGACCCTCCACCAGCTATCCTTTGG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCTGCGCACATGCAAGTaGGCGGGCATGGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVLRTCK*AGMESL
Trigger: CAACGACTCCATGCCCGCCCACTTGCATGTGCGCAG...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCTGCGCACATGCAAGTaGGCGGGCATGGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGLRTCK*AGMESL
Trigger: CAACGACTCCATGCCCGCCCACTTGCATGTGCGCAG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGATAGGGATGTCAGGTTaGGGCCGTAGAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRIGMSG*GRRGSW
Trigger: CCAACTGCCTCTACGGCCTCAACCTGACATCCCTAT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGATAGGGATGTCAGGTTaGGGCCGTAGAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGIGMSG*GRRGSW
Trigger: CCAACTGCCTCTACGGCCTCAACCTGACATCCCTAT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCACACGCAGGTAGTTaGGCCCACGAAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGAHAGS*AHERHR
Trigger: CCTATGCCTTTCGTGGGCTCAACTACCTGCGTGTGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCAAGTGCTTGCGGGGTaGGAGCCAAAGGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVQVLAG*EPKDSW
Trigger: CCAGCTATCCTTTGGCTCTCACCCCGCAAGCACTTG...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCAAGTGCTTGCGGGGTaGGAGCCAAAGGATAGCTGG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGQVLAG*EPKDSW
Trigger: CCAGCTATCCTTTGGCTCTCACCCCGCAAGCACTTG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCATCAGGGAAGACTGTaGGCCGCCCATTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGHQGRL*AAHCSW
Trigger: CCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCTGGCTGGTTGGAGATaGAGGCGAAGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVLAGWR*RRRSCW
Trigger: CCAACAAGACCTTCGCCTTCATCTCCAACCAGCCAG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCTGGCTGGTTGGAGATaGAGGCGAAGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGLAGWR*RRRSCW
Trigger: CCAACAAGACCTTCGCCTTCATCTCCAACCAGCCAG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGAACCGCAGCAGCTCATaGAGCATGGAGCCCTCGATT +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRNRSSS*SMEPSI
Trigger: AATCGAGGGCTCCATGCTGCATGAGCTGCTGCGGTT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGAACCGCAGCAGCTCATaGAGCATGGAGCCCTCGATT +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGNRSSS*SMEPSI
Trigger: AATCGAGGGCTCCATGCTGCATGAGCTGCTGCGGTT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTACCAGCTGGATCTCCTaGAACCGCAGCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGTSWIS*NRSSSC
Trigger: GCATGAGCTGCTGCGGTTGCAGGAGATCCAGCTGGT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGTACAAACACCTGCTGTaGCTTGCGGTCCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRYKHLL*LAVPDV
Trigger: CACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTA...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTCATCTACAAACACCTaGTGTGCCTTGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWSSTNT*CALRSR
Trigger: CCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGA...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGTCATCTACAAACACCTaGTGTGCCTTGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVSSTNT*CALRSR
Trigger: CCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGA...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCCCGGCATACAAACTaGACCGTGTGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVARHTN*TVWPSS
Trigger: AGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCCCGGCATACAAACTaGACCGTGTGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGARHTN*TVWPSS
Trigger: AGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGTGGAGGGTCGCCATCTaGCCGGCATACAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVWRVAI*PAYKLH
Trigger: GTGCAGTTTGTATGCCGGGCAGATGGCGACCCTCCA...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCCGAGACCAAGTGCTTaGGGGGTGAGAGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGPRPSA*GVRAKG
Trigger: TCCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCCGAGACCAAGTGCTTaGGGGGTGAGAGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVPRPSA*GVRAKG
Trigger: TCCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGG...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCGATGCACAGGTACGTaGCGTTGTCCTGTACCTGGG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVRCTGT*RCPVPG
Trigger: CCCAGGTACAGGACAACGGCACGTACCTGTGCATCG...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCAGCATTGGCTGCGATaGACAGGTACGTGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWQHWLR*TGTCRC
Trigger: ACAACGGCACGTACCTGTGCATCGCAGCCAATGCTG...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCAGCATTGGCTGCGATaGACAGGTACGTGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGQHWLR*TGTCRC
Trigger: ACAACGGCACGTACCTGTGCATCGCAGCCAATGCTG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAAGTCAGGCGAGTAGCTaGGCACATGCAAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRSQASS*AHASGR
Trigger: CCGCCCACTTGCATGTGCGCAGCTACTCGCCTGACT...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGCGCCTCCGTGGGGATaGAGGTCAGATTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVAPPWG*RSDCIS
Trigger: AGAAATGCAATCTGACCTCCATCCCCACGGAGGCGC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGCGCCTCCGTGGGGATaGAGGTCAGATTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRAPPWG*RSDCIS
Trigger: AGAAATGCAATCTGACCTCCATCCCCACGGAGGCGC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAGGCCGTAGAGGCAGTTaGGGGTCATGGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRGRRGS*GSWCPG
Trigger: ACCTGGACACCATGACCCCCAACTGCCTCTACGGCC...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGCAGCTCATGCAGCATaGAGCCCTCGATTGTACCGA +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVAAHAA*SPRLYR
Trigger: TCGGTACAATCGAGGGCTCCATGCTGCATGAGCTGC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCAGCTCATGCAGCATaGAGCCCTCGATTGTACCGA +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGAAHAA*SPRLYR
Trigger: TCGGTACAATCGAGGGCTCCATGCTGCATGAGCTGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGTCCAGGGTGGTCAGCTaGTTGCCAGAGACATTGAGC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVSRVVS*LPETLS
Trigger: GCTCAATGTCTCTGGCAACCAGCTGACCACCCTGGA...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTCCAGGGTGGTCAGCTaGTTGCCAGAGACATTGAGC +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWSRVVS*LPETLS
Trigger: GCTCAATGTCTCTGGCAACCAGCTGACCACCCTGGA...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTAGGTTGCCCACCGAATaGAAGGCTGACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGRLPTE*KADSSR
Trigger: CCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCAGTCACAGGCCAGTaGGTTGGAGTCCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGAVTGQ*VGVQDE
Trigger: CTCATCCTGGACTCCAACCCACTGGCCTGTGACTGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCATCCGGAAAGTCCTTaGACTCTTTGCCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGHPESP*TLCPGR
Trigger: TCGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCATCCGGAAAGTCCTTaGACTCTTTGCCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVHPESP*TLCPGR
Trigger: TCGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGACATCAGGGAAGACTGTaGGCCGCCCATTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRHQGRL*AAHCSW
Trigger: CCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATG...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCTGGCTGGTTGGAGATaGAGGCGAAGGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGLAGWR*RRRSCW
Trigger: CCAACAAGACCTTCGCCTTCATCTCCAACCAGCCAG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGCTGTCAGGTTGCAGTaGGTGATGGATAGGGATGTC +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRAVRLQ*VMDRDV
Trigger: GACATCCCTATCCATCACGCACTGCAACCTGACAGC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTAACCGCAGCAGCTCATaGAGCATGGAGCCCTCGATT +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGNRSSS*SMEPSI
Trigger: AATCGAGGGCTCCATGCTGCATGAGCTGCTGCGGTT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGTACAAACACCTGCTGTaGCTTGCGGTCCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVYKHLL*LAVPDV
Trigger: CACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTA...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTTACAAACACCTGCTGTaGCTTGCGGTCCCGGATGTG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGYKHLL*LAVPDV
Trigger: CACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTA...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACGCTTTGTGTTGCCTTTaGCCCGGCTCCATAGAAACA +
Preference number: 4 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHALCCL*PGSIET
Trigger: TGTTTCTATGGAGCCGGGGCAAAGGCAACACAAAGC...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCAGCTCATGCAGCATaGAGCCCTCGATTGTACCGA +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVAAHAA*SPRLYR
Trigger: TCGGTACAATCGAGGGCTCCATGCTGCATGAGCTGC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGTCCAGGGTGGTCAGCTaGTTGCCAGAGACATTGAGC +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVSRVVS*LPETLS
Trigger: GCTCAATGTCTCTGGCAACCAGCTGACCACCCTGGA...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTAGGCGAAGGTCTTGTTaGGTTGATGGGGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGRRRSC*VDGASQ
Trigger: CTGACTGGCCCCATCAACCCAACAAGACCTTCGCCT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAATAGGGATGTCAGGTTaGGGCCGTAGAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRIGMSG*GRRGSW
Trigger: CCAACTGCCTCTACGGCCTCAACCTGACATCCCTAT...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGAGCACGGCTCGGTCCTaGGCTGAGCACTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETESTARS*AEHSQR
Trigger: CCGCTGCGAGTGCTCAGCGCAGGACCGAGCCGTGCT...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGATGGAGGTCAGATTaGATTTCTCCAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWGWRSD*ISPASA
Trigger: AGCTGACGCTGGAGAAATGCAATCTGACCTCCATCC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCTGTCAGGTTGCAGTaGGTGATGGATAGGGATGTC +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVAVRLQ*VMDRDV
Trigger: GACATCCCTATCCATCACGCACTGCAACCTGACAGC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCTGTCAGGTTGCAGTaGGTGATGGATAGGGATGTC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGAVRLQ*VMDRDV
Trigger: GACATCCCTATCCATCACGCACTGCAACCTGACAGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGCTTTGTGTTGCCTTTaGCCCGGCTCCATAGAAACA +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRALCCL*PGSIET
Trigger: TGTTTCTATGGAGCCGGGGCAAAGGCAACACAAAGC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGCTTTGTGTTGCCTTTaGCCCGGCTCCATAGAAACA +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVALCCL*PGSIET
Trigger: TGTTTCTATGGAGCCGGGGCAAAGGCAACACAAAGC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCTTTGTGTTGCCTTTaGCCCGGCTCCATAGAAACA +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGALCCL*PGSIET
Trigger: TGTTTCTATGGAGCCGGGGCAAAGGCAACACAAAGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTGTTGTGCTTTGTGTTaGCTTTGCCCCGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWCCALC*LCPGSI
Trigger: TATGGAGCCGGGGCAAAGGCAACACAAAGCACAACA...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGACAAACTGCACCGTGTaGCCCTCATCTACAAACACC +
Preference number: 4 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVTNCTV*PSSTNT
Trigger: GGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGACAAACTGCACCGTGTaGCCCTCATCTACAAACACC +
Preference number: 4 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGTNCTV*PSSTNT
Trigger: GGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGACAAACTGCACCGTGTaGCCCTCATCTACAAACACC +
Preference number: 4 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWTNCTV*PSSTNT
Trigger: GGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAAGGCGAAGGTCTTGTTaGGTTGATGGGGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRRRRSC*VDGASQ
Trigger: CTGACTGGCCCCATCAACCCAACAAGACCTTCGCCT...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGATGGAGGTCAGATTaGATTTCTCCAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGGWRSD*ISPASA
Trigger: AGCTGACGCTGGAGAAATGCAATCTGACCTCCATCC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGTGCCCGCCCACCAGCTaGATCTCCTGCAACCGCAGC +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETECPPTS*ISCNRS
Trigger: GCTGCGGTTGCAGGAGATCCAGCTGGTGGGCGGGCA...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGATATCATCTTCATGTTaGACTTGCGGGGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRISSSC*TCGVHQ
Trigger: CTGATGCACCCCGCAAGTTCAACATGAAGATGATAT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGATGTTGTGCTTTGTGTTaGCTTTGCCCCGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRCCALC*LCPGSI
Trigger: TATGGAGCCGGGGCAAAGGCAACACAAAGCACAACA...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGGGGAGAGCGCCTCCGTaGGGATGGAGGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETEGRAPP*GWRSDC
Trigger: GCAATCTGACCTCCATCCCCACGGAGGCGCTCTCCC...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTTGCCCGCCCACCAGCTaGATCTCCTGCAACCGCAGC +
Preference number: 4 (lower is better)
Translates to: ETELEEGPGAIRTSKVCICPPTS*ISCNRS
Trigger: GCTGCGGTTGCAGGAGATCCAGCTGGTGGGCGGGCA...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTTGCGGTCCCGGATGTaGGCCCGGCGGCAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KQETELEEGPGAIRTSKVLRSRM*ARRQVK
Trigger: CTTCACCTGCCGCCGGGCCCACATCCGGGACCGCAA...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGTCACGATGTTTTCATTaGGTTCTAGCTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVSRCFH*VLAPPG
Trigger: ACCTGGAGGAGCTAGAACTCAATGAAAACATCGTGA...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGCACCGAATGGAAGGCTaGCTCCTCCAGGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETEHRMEG*LLQGGQ
Trigger: CTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTG...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTGCGGGGTGCATCAGCTaGGCTGATGCCTGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: KQETELEEGPGAIRTSKVAGCIS*ADACVR
Trigger: TCGGACGCAGGCATCAGCTCAGCTGATGCACCCCGC...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTATATCATCTTCATGTTaGACTTGCGGGGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGISSSC*TCGVHQ
Trigger: CTGATGCACCCCGCAAGTTCAACATGAAGATGATAT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGATATCATCTTCATGTTaGACTTGCGGGGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVISSSC*TCGVHQ
Trigger: CTGATGCACCCCGCAAGTTCAACATGAAGATGATAT...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGAGCAGGAGGATGGGCTaGCAGCAGGCCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSRRMG*QQARRG
Trigger: CCCCCTCCTGGCCTGCTGGCAGCCCATCCTCCTGCT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGAGCACGGCTCGGTCCTaGGCTGAGCACTCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSTARS*AEHSQR
Trigger: CCGCTGCGAGTGCTCAGCGCAGGACCGAGCCGTGCT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGTCCACCACGGCCAGCTaGCCGCCCACCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSTTAS*PPTSWI
Trigger: GATCCAGCTGGTGGGCGGGCAGCTGGCCGTGGTGGA...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGGTGGCGCAGGTGGGCTaGTGCCTGTTGAAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETEVAQVG*CLLKLS
Trigger: GCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCAC...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTCGGGCATGGAGTCGTTaGCGCCAGCATTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIRAWSR*RQHWLR
Trigger: TCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCG...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGTCAATTTCGATGTTGTaGTTTGTGTTGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRSISML*FVLPLP
Trigger: GGGCAAAGGCAACACAAAGCACAACATCGAAATTGA...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGGGCAGTTGGGGGTCATaGTGTCCAGGTAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETEGSWGS*CPGRAS
Trigger: ACTGGCCCTACCTGGACACCATGACCCCCAACTGCC...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCGGGGTGCATCAGCTaGGCTGATGCCTGCGTCCGA +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAGCIS*ADACVR
Trigger: TCGGACGCAGGCATCAGCTCAGCTGATGCACCCCGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGAGGACGATGAGGCCGTaGAGGTGGGAGAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLRTMRP*RWESAS
Trigger: GGAGGCGCTCTCCCACCTGCACGGCCTCATCGTCCT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGACACCTGCTGTGCCTTaGGGTCCCGGATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLTPAVP*GPGCGP
Trigger: GGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGTCAATTTCGATGTTGTaGTTTGTGTTGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVSISML*FVLPLP
Trigger: GGGCAAAGGCAACACAAAGCACAACATCGAAATTGA...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTTCAATTTCGATGTTGTaGTTTGTGTTGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGSISML*FVLPLP
Trigger: GGGCAAAGGCAACACAAAGCACAACATCGAAATTGA...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGGACGAACTCAGGTGTaGCGCAGGTGGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLGRTQV*RRWAAA
Trigger: GGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTCCAAAGGATAGCTGGTaGAGGGTCGCCATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIPKDSW*RVAICP
Trigger: CGGGCAGATGGCGACCCTCCACCAGCTATCCTTTGG...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTGCCGCCCATTGCTCTTaGCCGAGACCAAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIAAHCS*PRPSAC
Trigger: GCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGC...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGCCGCCACAAAGCGTTTaGGGTGGCAGAGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLPPQSV*GGRARL
Trigger: GAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGG...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGTCATCTACAAACACCTaGTGTGCCTTGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETESSTNT*CALRSR
Trigger: CCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGA...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTTGGAGGGTCGCCATCTaGCCGGCATACAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIWRVAI*PAYKLH
Trigger: GTGCAGTTTGTATGCCGGGCAGATGGCGACCCTCCA...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGCAGCATTGGCTGCGATaGACAGGTACGTGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETEQHWLR*TGTCRC
Trigger: ACAACGGCACGTACCTGTGCATCGCAGCCAATGCTG...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCGCCAGCATTGGCTaGGATGCACAGGTACGTGCC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAASIG*DAQVRA
Trigger: GGCACGTACCTGTGCATCGCAGCCAATGCTGGCGGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTAGTCAGGCGAGTAGCTaGGCACATGCAAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: KQETELEEGPGAIRTSKVSQASS*AHASGR
Trigger: CCGCCCACTTGCATGTGCGCAGCTACTCGCCTGACT...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTCGTTGCCGCCAGCATTaGCTGCGATGCACAGGTACG +
Preference number: 4 (lower is better)
Translates to: KQETELEEGPGAIRTSKVRCRQH*LRCTGT
Trigger: CGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACG...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGCATCCGGAAAGTCCTTaGACTCTTTGCCCTGGACGA +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETEHPESP*TLCPGR
Trigger: TCGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATG...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTGTGCATCAGCTGAGCTaGTGCCTGCGTCCGATTTCC +
Preference number: 4 (lower is better)
Translates to: KQETELEEGPGAIRTSKVVHQLS*CLRPIS
Trigger: GGAAATCGGACGCAGGCATCAGCTCAGCTGATGCAC...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTCGATGCACAGGTACGTaGCGTTGTCCTGTACCTGGG +
Preference number: 4 (lower is better)
Translates to: KQETELEEGPGAIRTSKVRCTGT*RCPVPG
Trigger: CCCAGGTACAGGACAACGGCACGTACCTGTGCATCG...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGGCAGTTGGGGGTCATaGTGTCCAGGTAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLGSWGS*CPGRAS
Trigger: ACTGGCCCTACCTGGACACCATGACCCCCAACTGCC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTGCAGTCACAGGCCAGTaGGTTGGAGTCCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: KQETELEEGPGAIRTSKVAVTGQ*VGVQDE
Trigger: CTCATCCTGGACTCCAACCCACTGGCCTGTGACTGC...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCGCCCATTGCTCTTaGCCGAGACCAAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAAHCS*PRPSAC
Trigger: GCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGCGTTGCCGCCAGCATTaGCTGCGATGCACAGGTACG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLRCRQH*LRCTGT
Trigger: CGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACG...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGCTGCGCACATGCAAGTaGGCGGGCATGGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLLRTCK*AGMESL
Trigger: CAACGACTCCATGCCCGCCCACTTGCATGTGCGCAG...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCACACGCAGGTAGTTaGGCCCACGAAAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAHAGS*AHERHR
Trigger: CCTATGCCTTTCGTGGGCTCAACTACCTGCGTGTGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGACCAGCTGGATCTCCTaGAACCGCAGCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLTSWIS*NRSSSC
Trigger: GCATGAGCTGCTGCGGTTGCAGGAGATCCAGCTGGT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGTGGAGGGTCGCCATCTaGCCGGCATACAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLWRVAI*PAYKLH
Trigger: GTGCAGTTTGTATGCCGGGCAGATGGCGACCCTCCA...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGCCGAGACCAAGTGCTTaGGGGGTGAGAGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLPRPSA*GVRAKG
Trigger: TCCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGG...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGTGTTGTGCTTTGTGTTaGCTTTGCCCCGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETECCALC*LCPGSI
Trigger: TATGGAGCCGGGGCAAAGGCAACACAAAGCACAACA...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGAGGTTGCCCACCGAATaGAAGGCTGACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLRLPTE*KADSSR
Trigger: CCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCAGTCACAGGCCAGTaGGTTGGAGTCCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAVTGQ*VGVQDE
Trigger: CTCATCCTGGACTCCAACCCACTGGCCTGTGACTGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGACAAACTGCACCGTGTaGCCCTCATCTACAAACACC +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETETNCTV*PSSTNT
Trigger: GGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGT...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGATAGGGATGTCAGGTTaGGGCCGTAGAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLIGMSG*GRRGSW
Trigger: CCAACTGCCTCTACGGCCTCAACCTGACATCCCTAT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGTCATCTACAAACACCTaGTGTGCCTTGCGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSSTNT*CALRSR
Trigger: CCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGA...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGCAGCATTGGCTGCGATaGACAGGTACGTGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLQHWLR*TGTCRC
Trigger: ACAACGGCACGTACCTGTGCATCGCAGCCAATGCTG...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCAGCTCATGCAGCATaGAGCCCTCGATTGTACCGA +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAAHAA*SPRLYR
Trigger: TCGGTACAATCGAGGGCTCCATGCTGCATGAGCTGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGAGGCGAAGGTCTTGTTaGGTTGATGGGGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLRRRSC*VDGASQ
Trigger: CTGACTGGCCCCATCAACCCAACAAGACCTTCGCCT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGATATCATCTTCATGTTaGACTTGCGGGGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: EVGRAGINVPICTDVETEISSSC*TCGVHQ
Trigger: CTGATGCACCCCGCAAGTTCAACATGAAGATGATAT...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCTGTCAGGTTGCAGTaGGTGATGGATAGGGATGTC +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAVRLQ*VMDRDV
Trigger: GACATCCCTATCCATCACGCACTGCAACCTGACAGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGGATGGAGGTCAGATTaGATTTCTCCAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLGWRSD*ISPASA
Trigger: AGCTGACGCTGGAGAAATGCAATCTGACCTCCATCC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR TCA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGTCACGATGTTTTCATTaGGTTCTAGCTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSRCFH*VLAPPG
Trigger: ACCTGGAGGAGCTAGAACTCAATGAAAACATCGTGA...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR GCA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTCAATTTCGATGTTGTaGTTTGTGTTGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: KQETELEEGPGAIRTSKVSISML*FVLPLP
Trigger: GGGCAAAGGCAACACAAAGCACAACATCGAAATTGA...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS GCA 90 bp GGCACCGCCACAAAGCGTTTGCGGTGGCAGAGCACGGCTCGGTCCTaGGCTGAGCACTCGCAGCGGGGCGGGCAGCCTGTAGCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: GTATKRLRWQSTARS*AEHSQRGGQPVAEP
Trigger: AGGCTCTGCTACAGGCTGCCCGCCCCGCTGCGAGTGCTCAGCGCAGGACCGAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACTGCTGCCTGTTGAAGTaGAGCCGCCAGCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHCCLLK*SRQRRR
Trigger: CCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCA...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS CCA 90 bp GGGGCCAGTCAGGCGAGTAGCTGCGCACATGCAAGTGGGCGGGCATaGAGTCGTTGCCGCCAGCATTGGCTGCGATGCACAGGTACGTGC +
Preference number: 5 (lower is better)
Translates to: GASQASSCAHASGRA*SRCRQHWLRCTGTC
Trigger: GCACGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGCATGTGCGCAGCTACTCGCCTGACTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 90 bp CCAGTACCAGCAGGAGGATGGGCTGCCAGCAGGCCAGGAGGGGGCTaGGCATGCTTCTCATACCCCCTGCCAGCATCCTCTCGCTCACCT +
Preference number: 5 (lower is better)
Translates to: PVPAGGWAASRPGGG*ACFSYPLPASSRSP
Trigger: AGGTGAGCGAGAGGATGCTGGCAGGGGGTATGAGAAGCATGCCCAGCCCCCTCCTGGCCTGCTGGCAGCCCATCCTCCTGCTGGTACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000114256.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTGCTGCCTGTTGAAGTaGAGCCGCCAGCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWCCLLK*SRQRRR
Trigger: CCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCA...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGTGCTGCCTGTTGAAGTaGAGCCGCCAGCGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRCCLLK*SRQRRR
Trigger: CCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCA...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGTCGTTGCCGCCAGCATaGGCTGCGATGCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLSLPPA*AAMHRY
Trigger: GTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGA...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCGGGCATGGAGTCGTaGCCGCCAGCATTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWAGMES*PPALAA
Trigger: CGCAGCCAATGCTGGCGGCAACGACTCCATGCCCGC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCGGGCATGGAGTCGTaGCCGCCAGCATTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGAGMES*PPALAA
Trigger: CGCAGCCAATGCTGGCGGCAACGACTCCATGCCCGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 90 bp GTACCTGGGCGTAGCGCACCTCCAGCGTGCCATCAGGGAAGACTGTaGGCCGCCCATTGCTCTTGGCCGAGACCAAGTGCTTGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: VPGRSAPPACHQGRL*AAHCSWPRPSACGV
Trigger: CACCCCGCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATGGCACGCTGGAGGTGCGCTACGCCCAGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 90 bp AACTCTTTGCCCTGGACGAACTCAGGTGTGGCGCAGGTGGGCTGCTaGCTGTTGAAGTTGAGCCGCCAGCGGCGCCGGAACACCCACAGC +
Preference number: 5 (lower is better)
Translates to: NSLPWTNSGVAQVGC*LLKLSRQRRRNTHS
Trigger: GCTGTGGGTGTTCCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCCAGGGCAAAGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 90 bp GCCCGGCATACAAACTGCACCGTGTGGCCCTCATCTACAAACACCTaGTGTGCCTTGCGGTCCCGGATGTGGGCCCGGCGGCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: ARHTNCTVWPSSTNT*CALRSRMWARRQVK
Trigger: CTTCACCTGCCGCCGGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 90 bp GCAAGTGGGCGGGCATGGAGTCGTTGCCGCCAGCATTGGCTGCGATaGACAGGTACGTGCCGTTGTCCTGTACCTGGGCGTAGCGCACCT +
Preference number: 5 (lower is better)
Translates to: ASGRAWSRCRQHWLR*TGTCRCPVPGRSAP
Trigger: AGGTGCGCTACGCCCAGGTACAGGACAACGGCACGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGTCCAGCTTGGTCAAGTaGCTGAGGCCGGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLSSLVK*LRPVKT
Trigger: CGTCTTCACCGGCCTCAGCAACTTGACCAAGCTGGA...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGTGGGCTGCTGCCTGTaGAAGTTGAGCCGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGVGCCL*KLSRQR
Trigger: CCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCAC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGAACACCTGCTGTGCCTaGCGGTCCCGGATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGNTCCA*RSRMWA
Trigger: GGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGAACACCTGCTGTGCCTaGCGGTCCCGGATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRNTCCA*RSRMWA
Trigger: GGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 90 bp TGGCGCGGGTGCTGTTGGCCTCTCCCTCGCCTGGCTGGTTGGAGATaGAGGCGAAGGTCTTGTTGGGTTGATGGGGCCAGTCAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: WRGCCWPLPRLAGWR*RRRSCWVDGASQAS
Trigger: ACTCGCCTGACTGGCCCCATCAACCCAACAAGACCTTCGCCTTCATCTCCAACCAGCCAGGCGAGGGAGAGGCCAACAGCACCCGCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 90 bp TTGAACTCTTTGCCCTGGACGAACTCAGGTGTGGCGCAGGTGGGCTaGTGCCTGTTGAAGTTGAGCCGCCAGCGGCGCCGGAACACCCAC +
Preference number: 5 (lower is better)
Translates to: LNSLPWTNSGVAQVG*CLLKLSRQRRRNTH
Trigger: GTGGGTGTTCCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCCAGGGCAAAGAGTTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 90 bp CAGGCGAGTAGCTGCGCACATGCAAGTGGGCGGGCATGGAGTCGTTaGCGCCAGCATTGGCTGCGATGCACAGGTACGTGCCGTTGTCCT +
Preference number: 5 (lower is better)
Translates to: QASSCAHASGRAWSR*RQHWLRCTGTCRCP
Trigger: AGGACAACGGCACGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGCATGTGCGCAGCTACTCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 90 bp GGGGAAAGGCACAGTGGCGCGGGTGCTGTTGGCCTCTCCCTCGCCTaGCTGGTTGGAGATGAAGGCGAAGGTCTTGTTGGGTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: GERHSGAGAVGLSLA*LVGDEGEGLVGLMG
Trigger: CCCCATCAACCCAACAAGACCTTCGCCTTCATCTCCAACCAGCCAGGCGAGGGAGAGGCCAACAGCACCCGCGCCACTGTGCCTTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGACCGCCACAAAGCGTTaGCGGTGGCAGAGCACGGCT +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGTATKR*RWQSTA
Trigger: AGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGACCGCCACAAAGCGTTaGCGGTGGCAGAGCACGGCT +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVTATKR*RWQSTA
Trigger: AGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACAGCTGTTCCAGGCTGTaGAGGCCGCTGAAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHSCSRL*RPLKAR
Trigger: TCGAGCCTTCAGCGGCCTCAACAGCCTGGAACAGCT...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTGGGCTGCTGCCTGTaGAAGTTGAGCCGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVVGCCL*KLSRQR
Trigger: CCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCAC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGAACACCTGCTGTGCCTaGCGGTCCCGGATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVNTCCA*RSRMWA
Trigger: GGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTT...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGCCGAGACCAAGTGCTaGCGGGGTGAGAGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVAETKC*RGESQR
Trigger: CCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGGC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGCCCTCGCCTGGCTGGTaGGAGATGAAGGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRPSPGW*EMKAKV
Trigger: GACCTTCGCCTTCATCTCCAACCAGCCAGGCGAGGG...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCCCTCGCCTGGCTGGTaGGAGATGAAGGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVPSPGW*EMKAKV
Trigger: GACCTTCGCCTTCATCTCCAACCAGCCAGGCGAGGG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCCCTCGCCTGGCTGGTaGGAGATGAAGGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWPSPGW*EMKAKV
Trigger: GACCTTCGCCTTCATCTCCAACCAGCCAGGCGAGGG...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 90 bp AGGCGAAGGTCTTGTTGGGTTGATGGGGCCAGTCAGGCGAGTAGCTaGGCACATGCAAGTGGGCGGGCATGGAGTCGTTGCCGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: RRRSCWVDGASQASS*AHASGRAWSRCRQH
Trigger: ATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGCATGTGCGCAGCTACTCGCCTGACTGGCCCCATCAACCCAACAAGACCTTCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 90 bp GCTGGTGGAGGGTCGCCATCTGCCCGGCATACAAACTGCACCGTGTaGCCCTCATCTACAAACACCTGCTGTGCCTTGCGGTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: AGGGSPSARHTNCTV*PSSTNTCCALRSRM
Trigger: CATCCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGCAGATGGCGACCCTCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGACCGCCACAAAGCGTTaGCGGTGGCAGAGCACGGCT +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVTATKR*RWQSTA
Trigger: AGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGT...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACAGGTTGAAGAGGTTGTaGAAGGCGCCTGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHRLKRL*KAPGST
Trigger: CGTGGAGCCAGGCGCCTTCAACAACCTCTTCAACCT...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACCTCAGGTTGAAGAGGTaGTTGAAGGCGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHLRLKR*LKAPGS
Trigger: GGAGCCAGGCGCCTTCAACAACCTCTTCAACCTGAG...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGATAAGCTTCAGGCGGTaGCTGCGCAGCCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVISFRR*LRSPRV
Trigger: GACTCTGGGGCTGCGCAGCAACCGCCTGAAGCTTAT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGATAAGCTTCAGGCGGTaGCTGCGCAGCCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGISFRR*LRSPRV
Trigger: GACTCTGGGGCTGCGCAGCAACCGCCTGAAGCTTAT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGATAAGCTTCAGGCGGTaGCTGCGCAGCCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRISFRR*LRSPRV
Trigger: GACTCTGGGGCTGCGCAGCAACCGCCTGAAGCTTAT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGAGCTGTTCCAGGCTGTaGAGGCCGCTGAAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGSCSRL*RPLKAR
Trigger: TCGAGCCTTCAGCGGCCTCAACAGCCTGGAACAGCT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGCCGCCCATTGCTCTaGGCCGAGACCAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVSRPLL*AETKCL
Trigger: CAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGACTGTGAGCCGCCCATaGCTCTTGGCCGAGACCAAG +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWTVSRP*LLAETK
Trigger: CTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGACTGTGAGCCGCCCATaGCTCTTGGCCGAGACCAAG +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVTVSRP*LLAETK
Trigger: CTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGTCGTTGCCGCCAGCATaGGCTGCGATGCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVSLPPA*AAMHRY
Trigger: GTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGA...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACGAAGGTCTTGTTGGGTaGATGGGGCCAGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHEGLVG*MGPVRR
Trigger: TCGCCTGACTGGCCCCATCAACCCAACAAGACCTTC...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCCCTCGCCTGGCTGGTaGGAGATGAAGGCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGPSPGW*EMKAKV
Trigger: GACCTTCGCCTTCATCTCCAACCAGCCAGGCGAGGG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 90 bp TCAGGGAAGACTGTGAGCCGCCCATTGCTCTTGGCCGAGACCAAGTaGTTGCGGGGTGAGAGCCAAAGGATAGCTGGTGGAGGGTCGCCA +
Preference number: 5 (lower is better)
Translates to: SGKTVSRPLLLAETK*LRGESQRIAGGGSP
Trigger: TGGCGACCCTCCACCAGCTATCCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAGGTTGAAGAGGTTGTaGAAGGCGCCTGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWRLKRL*KAPGST
Trigger: CGTGGAGCCAGGCGCCTTCAACAACCTCTTCAACCT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGTTGAAGAGGTTGTaGAAGGCGCCTGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVRLKRL*KAPGST
Trigger: CGTGGAGCCAGGCGCCTTCAACAACCTCTTCAACCT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGCTCAGGTTGAAGAGGTaGTTGAAGGCGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRLRLKR*LKAPGS
Trigger: GGAGCCAGGCGCCTTCAACAACCTCTTCAACCTGAG...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCTCAGGTTGAAGAGGTaGTTGAAGGCGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVLRLKR*LKAPGS
Trigger: GGAGCCAGGCGCCTTCAACAACCTCTTCAACCTGAG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGTCCAGCTTGGTCAAGTaGCTGAGGCCGGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGSSLVK*LRPVKT
Trigger: CGTCTTCACCGGCCTCAGCAACTTGACCAAGCTGGA...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACTCACTGATGTCCAGCTaGGTCAAGTTGCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHSLMSS*VKLLRP
Trigger: CGGCCTCAGCAACTTGACCAAGCTGGACATCAGTGA...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGCACCCATGGCTCCAAATGGCGCCCAGCAGAGTGGGCCAGAGGGTGGGGCTGAGCAGGATGACGATCTaGTTCTCACTGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WHPWLQMAPSRVGQRVGLSRMTI*FSLMSS
Trigger: GCTGGACATCAGTGAGAACAAGATCGTCATCCTGCT...CAGCCCCACCCTCTGGCCCACTCTGCTGGGCGCCATTTGGAGCCATGGGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAGCCGAGACCAAGTGCTaGCGGGGTGAGAGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRAETKC*RGESQR
Trigger: CCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGGC...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGACTGTGAGCCGCCCATaGCTCTTGGCCGAGACCAAG +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVTVSRP*LLAETK
Trigger: CTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGT...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTTCGTTGCCGCCAGCATaGGCTGCGATGCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGSLPPA*AAMHRY
Trigger: GTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGA...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGGAAGGTCTTGTTGGGTaGATGGGGCCAGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVEGLVG*MGPVRR
Trigger: TCGCCTGACTGGCCCCATCAACCCAACAAGACCTTC...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 90 bp GGAGTCCAGGATGAGCGTCTCCAGGTTGCCCACCGAATGGAAGGCTaGCTCCTCCAGGGTGGTCAGCTGGTTGCCAGAGACATTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GVQDERLQVAHRMEG*LLQGGQLVARDIEH
Trigger: GTGCTCAATGTCTCTGGCAACCAGCTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCTGGAGACGCTCATCCTGGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 90 bp GCATACAAACTGCACCGTGTGGCCCTCATCTACAAACACCTGCTGTaGCTTGCGGTCCCGGATGTGGGCCCGGCGGCAGGTGAAGTAGTT +
Preference number: 5 (lower is better)
Translates to: AYKLHRVALIYKHLL*LAVPDVGPAAGEVV
Trigger: AACTACTTCACCTGCCGCCGGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGTATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 90 bp AGTGGGTTGGAGTCCAGGATGAGCGTCTCCAGGTTGCCCACCGAATaGAAGGCTGACTCCTCCAGGGTGGTCAGCTGGTTGCCAGAGACA +
Preference number: 5 (lower is better)
Translates to: SGLESRMSVSRLPTE*KADSSRVVSWLPET
Trigger: TGTCTCTGGCAACCAGCTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCTGGAGACGCTCATCCTGGACTCCAACCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCTCAGGTTGAAGAGGTaGTTGAAGGCGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVLRLKR*LKAPGS
Trigger: GGAGCCAGGCGCCTTCAACAACCTCTTCAACCTGAG...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCCCAGAGTCCTCAGGTaGAAGAGGTTGTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGPRVLR*KRLLKA
Trigger: CGCCTTCAACAACCTCTTCAACCTGAGGACTCTGGG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCCCAGAGTCCTCAGGTaGAAGAGGTTGTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVPRVLR*KRLLKA
Trigger: CGCCTTCAACAACCTCTTCAACCTGAGGACTCTGGG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGTCCAGCTTGGTCAAGTaGCTGAGGCCGGTGAAGACG +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVSSLVK*LRPVKT
Trigger: CGTCTTCACCGGCCTCAGCAACTTGACCAAGCTGGA...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGTCACTGATGTCCAGCTaGGTCAAGTTGCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVSLMSS*VKLLRP
Trigger: CGGCCTCAGCAACTTGACCAAGCTGGACATCAGTGA...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGTCACTGATGTCCAGCTaGGTCAAGTTGCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGSLMSS*VKLLRP
Trigger: CGGCCTCAGCAACTTGACCAAGCTGGACATCAGTGA...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTCACTGATGTCCAGCTaGGTCAAGTTGCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWSLMSS*VKLLRP
Trigger: CGGCCTCAGCAACTTGACCAAGCTGGACATCAGTGA...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGGGATGGAGGTCAGATaGCATTTCTCCAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRGMEVR*HFSSVS
Trigger: GCTGACGCTGGAGAAATGCAATCTGACCTCCATCCC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGGATGGAGGTCAGATaGCATTTCTCCAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWGMEVR*HFSSVS
Trigger: GCTGACGCTGGAGAAATGCAATCTGACCTCCATCCC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCATGGAGCCCTCGATaGTACCGATTGGGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGAWSPR*YRLGCR
Trigger: CCTACAACCCAATCGGTACAATCGAGGGCTCCATGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAGGGTGGTCAGCTGGTaGCCAGAGACATTGAGCACA +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWRVVSW*PETLST
Trigger: TGTGCTCAATGTCTCTGGCAACCAGCTGACCACCCT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGTGGTCAGCTGGTaGCCAGAGACATTGAGCACA +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVRVVSW*PETLST
Trigger: TGTGCTCAATGTCTCTGGCAACCAGCTGACCACCCT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGAGGGTGGTCAGCTGGTaGCCAGAGACATTGAGCACA +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRRVVSW*PETLST
Trigger: TGTGCTCAATGTCTCTGGCAACCAGCTGACCACCCT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAAGGTCTTGTTGGGTaGATGGGGCCAGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVEGLVG*MGPVRR
Trigger: TCGCCTGACTGGCCCCATCAACCCAACAAGACCTTC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACTTTCGATGTTGTGCTTaGTGTTGCCTTTGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHFRCCA*CCLCPG
Trigger: GCCGGGGCAAAGGCAACACAAAGCACAACATCGAAA...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS GCA 90 bp CAAAGGATAGCTGGTGGAGGGTCGCCATCTGCCCGGCATACAAACTaGACCGTGTGGCCCTCATCTACAAACACCTGCTGTGCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: QRIAGGGSPSARHTN*TVWPSSTNTCCALR
Trigger: CCGCAAGGCACAGCAGGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGCAGATGGCGACCCTCCACCAGCTATCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGTCCTGGTTGAGTGTCTaGATGCGGTTTTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRSWLSV*MRFLPR
Trigger: CCTGGGCAAAAACCGCATCAAGACACTCAACCAGGA...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTCCCAGAGTCCTCAGGTaGAAGAGGTTGTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGPRVLR*KRLLKA
Trigger: CGCCTTCAACAACCTCTTCAACCTGAGGACTCTGGG...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCTGATGGCATTGATGTaGAGATGTCGTAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGLMALM*RCRSRR
Trigger: CCTGCGGCTACGACATCTCAACATCAATGCCATCAG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCTGATGGCATTGATGTaGAGATGTCGTAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVLMALM*RCRSRR
Trigger: CCTGCGGCTACGACATCTCAACATCAATGCCATCAG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGCATGGAGCCCTCGATaGTACCGATTGGGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVAWSPR*YRLGCR
Trigger: CCTACAACCCAATCGGTACAATCGAGGGCTCCATGC...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCATGGAGCCCTCGATaGTACCGATTGGGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGAWSPR*YRLGCR
Trigger: CCTACAACCCAATCGGTACAATCGAGGGCTCCATGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGACATCCGGAAAGTCCTaGAACTCTTTGCCCTGGACG +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGTSGKS*NSLPWT
Trigger: CGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATGT...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGGCGATAATGAGCGTCTaGATGTCGAAGGGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRAIMSV*MSKGKG
Trigger: GCCTTTCCCCTTCGACATCAAGACGCTCATTATCGC...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGTGCTTTGTGTTGCCTTaGCCCCGGCTCCATAGAAAC +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWCFVLP*PRLHRN
Trigger: GTTTCTATGGAGCCGGGGCAAAGGCAACACAAAGCA...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGTGCTTTGTGTTGCCTTaGCCCCGGCTCCATAGAAAC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRCFVLP*PRLHRN
Trigger: GTTTCTATGGAGCCGGGGCAAAGGCAACACAAAGCA...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGATGTTGTGCTTTGTGTaGCCTTTGCCCCGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRMLCFV*PLPRLH
Trigger: ATGGAGCCGGGGCAAAGGCAACACAAAGCACAACAT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGTTTCGATGTTGTGCTTaGTGTTGCCTTTGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRFRCCA*CCLCPG
Trigger: GCCGGGGCAAAGGCAACACAAAGCACAACATCGAAA...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCAAACTCGTCCTGGTaGAGTGTCTTGATGCGGTTT +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWANSSW*SVLMRF
Trigger: AAACCGCATCAAGACACTCAACCAGGACGAGTTTGC...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGGCAAACTCGTCCTGGTaGAGTGTCTTGATGCGGTTT +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGANSSW*SVLMRF
Trigger: AAACCGCATCAAGACACTCAACCAGGACGAGTTTGC...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAGCAGGATGACGATCTaGTTCTCACTGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWSRMTI*FSLMSS
Trigger: GCTGGACATCAGTGAGAACAAGATCGTCATCCTGCT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGAGCAGGATGACGATCTaGTTCTCACTGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRSRMTI*FSLMSS
Trigger: GCTGGACATCAGTGAGAACAAGATCGTCATCCTGCT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAGGGATGGAGGTCAGATaGCATTTCTCCAGCGTCAGC +
Preference number: 5 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRGMEVR*HFSSVS
Trigger: GCTGACGCTGGAGAAATGCAATCTGACCTCCATCCC...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCTGATGGCATTGATGTaGAGATGTCGTAGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVLMALM*RCRSRR
Trigger: CCTGCGGCTACGACATCTCAACATCAATGCCATCAG...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAAGGGTGGTCAGCTGGTaGCCAGAGACATTGAGCACA +
Preference number: 5 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRRVVSW*PETLST
Trigger: TGTGCTCAATGTCTCTGGCAACCAGCTGACCACCCT...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGAGGAAGTCCTTGAACTCTTaGCCCTGGACGAACTCAGGT +
Preference number: 5 (lower is better)
Translates to: GPQAWPSEILVEGGQAVRKSLNS*PWTNSG
Trigger: ACCTGAGTTCGTCCAGGGCAAAGAGTTCAAGGACTT...CCTCACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGAAGTCCTTGAACTCTTaGCCCTGGACGAACTCAGGT +
Preference number: 5 (lower is better)
Translates to: LCRVLVRRLCQLWPLCRWKSLNS*PWTNSG
Trigger: ACCTGAGTTCGTCCAGGGCAAAGAGTTCAAGGACTT...CCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTACATCCGGAAAGTCCTaGAACTCTTTGCCCTGGACG +
Preference number: 5 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGTSGKS*NSLPWT
Trigger: CGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATGT...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp ACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGACATCCGGAAAGTCCTaGAACTCTTTGCCCTGGACG +
Preference number: 5 (lower is better)
Translates to: TLPRVGSSALSTLAPVQVTSGKS*NSLPWT
Trigger: CGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATGT...CACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGGCGGGCATGGAGTCGTaGCCGCCAGCATTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: EVGRAGINVPICTDVETEAGMES*PPALAA
Trigger: CGCAGCCAATGCTGGCGGCAACGACTCCATGCCCGC...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCGATAATGAGCGTCTaGATGTCGAAGGGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGAIMSV*MSKGKG
Trigger: GCCTTTCCCCTTCGACATCAAGACGCTCATTATCGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGATCTTCATGTTGAACTaGCGGGGTGCATCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVIFMLN*RGASAE
Trigger: CTCAGCTGATGCACCCCGCAAGTTCAACATGAAGAT...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGCAAACTCGTCCTGGTaGAGTGTCTTGATGCGGTTT +
Preference number: 5 (lower is better)
Translates to: DSAACWFVGFVNSGPCAGANSSW*SVLMRF
Trigger: AAACCGCATCAAGACACTCAACCAGGACGAGTTTGC...ACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGGTGGGCTGCTGCCTGTaGAAGTTGAGCCGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: EVGRAGINVPICTDVETEVGCCL*KLSRQR
Trigger: CCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCAC...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCCTCCCCACAGGGGAAGAGAAGAGAGAGGAGGAAGAGGAGGAGGAGGAAGAGAACATCCGGAAAGTCCTaGAACTCTTTGCCCTGGACG +
Preference number: 5 (lower is better)
Translates to: PSPQGKRRERRKRRRRKRTSGKS*NSLPWT
Trigger: CGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATGT...TCTCTTCCTCCTCCTCCTCTTCCTCCTCTCTCTTCTCTTCCCCTGTGGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp CCACTGACCGTGCTGTTCCCCAGGAGGACCCCAGCCCATCCCAGTTTCAGCCACCATATCATCTTCATGTaGAACTTGCGGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: PLTVLFPRRTPAHPSFSHHIIFM*NLRGAS
Trigger: TGATGCACCCCGCAAGTTCAACATGAAGATGATATG...GTGGCTGAAACTGGGATGGGCTGGGGTCCTCCTGGGGAACAGCACGGTCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS CCA 90 bp TTGAGTTCTAGCTCCTCCAGGTGTGGGAAGCTGGCAAACTCGTCCTaGTTGAGTGTCTTGATGCGGTTTTTGCCCAGGTCCAGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: LSSSSSRCGKLANSS*LSVLMRFLPRSSRR
Trigger: TCGCCTGCTGGACCTGGGCAAAAACCGCATCAAGACACTCAACCAGGACGAGTTTGCCAGCTTCCCACACCTGGAGGAGCTAGAACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGACCGCCACAAAGCGTTaGCGGTGGCAGAGCACGGCT +
Preference number: 5 (lower is better)
Translates to: EVGRAGINVPICTDVETETATKR*RWQSTA
Trigger: AGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGT...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTGTGGGCTGCTGCCTGTaGAAGTTGAGCCGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIVGCCL*KLSRQR
Trigger: CCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCAC...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TGGGGTCCTCAGGCCTGGCCTTCTGAAATCCTGGTAGAAGGAGGGCAGGCGGTGCATATCATCTTCATGTaGAACTTGCGGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: WGPQAWPSEILVEGGQAVHIIFM*NLRGAS
Trigger: TGATGCACCCCGCAAGTTCAACATGAAGATGATATG...CACCGCCTGCCCTCCTTCTACCAGGATTTCAGAAGGCCAGGCCTGAGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCCCTGTGCAGGTGGGCATATCATCTTCATGTaGAACTTGCGGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: SAACWFVGFVNSGPCAGGHIIFM*NLRGAS
Trigger: TGATGCACCCCGCAAGTTCAACATGAAGATGATATG...CCCACCTGCACAGGGGCCAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGATAAGCTTCAGGCGGTaGCTGCGCAGCCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: EVGRAGINVPICTDVETEISFRR*LRSPRV
Trigger: GACTCTGGGGCTGCGCAGCAACCGCCTGAAGCTTAT...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTAACACCTGCTGTGCCTaGCGGTCCCGGATGTGGGCC +
Preference number: 5 (lower is better)
Translates to: KQETELEEGPGAIRTSKVNTCCA*RSRMWA
Trigger: GGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTT...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAGGTAGGCAGGGCAGGGATAAATGTTCCCATTTGTACAGATGTGGAGACTGAGAGCCGCCCATTGCTCTaGGCCGAGACCAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: EVGRAGINVPICTDVETESRPLL*AETKCL
Trigger: CAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCT...CTCAGTCTCCACATCTGTACAAATGGGAACATTTATCCCTGCCCTGCCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTAGCTGTTCCAGGCTGTaGAGGCCGCTGAAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: ETELEEGPGAIRTSKVCISCSRL*RPLKAR
Trigger: TCGAGCCTTCAGCGGCCTCAACAGCCTGGAACAGCT...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTAGCCGCCCATTGCTCTaGGCCGAGACCAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: ETELEEGPGAIRTSKVCISRPLL*AETKCL
Trigger: CAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCT...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCCGAGACCAAGTGCTaGCGGGGTGAGAGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAETKC*RGESQR
Trigger: CCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTGAAGGTCTTGTTGGGTaGATGGGGCCAGTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIEGLVG*MGPVRR
Trigger: TCGCCTGACTGGCCCCATCAACCCAACAAGACCTTC...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTAGGTTGAAGAGGTTGTaGAAGGCGCCTGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: KQETELEEGPGAIRTSKVRLKRL*KAPGST
Trigger: CGTGGAGCCAGGCGCCTTCAACAACCTCTTCAACCT...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGAGCTGTTCCAGGCTGTaGAGGCCGCTGAAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSCSRL*RPLKAR
Trigger: TCGAGCCTTCAGCGGCCTCAACAGCCTGGAACAGCT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGAGCCGCCCATTGCTCTaGGCCGAGACCAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSRPLL*AETKCL
Trigger: CAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGTCGTTGCCGCCAGCATaGGCTGCGATGCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLSLPPA*AAMHRY
Trigger: GTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGA...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTCCCAGAGTCCTCAGGTaGAAGAGGTTGTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: KQETELEEGPGAIRTSKVPRVLR*KRLLKA
Trigger: CGCCTTCAACAACCTCTTCAACCTGAGGACTCTGGG...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTGCATGGAGCCCTCGATaGTACCGATTGGGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: KQETELEEGPGAIRTSKVAWSPR*YRLGCR
Trigger: CCTACAACCCAATCGGTACAATCGAGGGCTCCATGC...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTATGTTGTGCTTTGTGTaGCCTTTGCCCCGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIMLCFV*PLPRLH
Trigger: ATGGAGCCGGGGCAAAGGCAACACAAAGCACAACAT...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTTTTCGATGTTGTGCTTaGTGTTGCCTTTGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIFRCCA*CCLCPG
Trigger: GCCGGGGCAAAGGCAACACAAAGCACAACATCGAAA...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCTTTGTGTTGCCTTaGCCCCGGCTCCATAGAAAC +
Preference number: 5 (lower is better)
Translates to: KQETELEEGPGAIRTSKVCFVLP*PRLHRN
Trigger: GTTTCTATGGAGCCGGGGCAAAGGCAACACAAAGCA...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp GAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTTGCATTATCTTCATGTTGAACTaGCGGGGTGCATCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: ETELEEGPGAIRTSKVCIIFMLN*RGASAE
Trigger: CTCAGCTGATGCACCCCGCAAGTTCAACATGAAGAT...AATGCAAACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCGATAATGAGCGTCTaGATGTCGAAGGGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLAIMSV*MSKGKG
Trigger: GCCTTTCCCCTTCGACATCAAGACGCTCATTATCGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGTGCTTTGTGTTGCCTTaGCCCCGGCTCCATAGAAAC +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLCFVLP*PRLHRN
Trigger: GTTTCTATGGAGCCGGGGCAAAGGCAACACAAAGCA...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGATGTTGTGCTTTGTGTaGCCTTTGCCCCGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLMLCFV*PLPRLH
Trigger: ATGGAGCCGGGGCAAAGGCAACACAAAGCACAACAT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGTTTCGATGTTGTGCTTaGTGTTGCCTTTGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLFRCCA*CCLCPG
Trigger: GCCGGGGCAAAGGCAACACAAAGCACAACATCGAAA...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp AAACAAGAAACTGAGTTGGAAGAAGGCCCTGGAGCCATCAGGACGTCAAAAGTTATCTTCATGTTGAACTaGCGGGGTGCATCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: KQETELEEGPGAIRTSKVIFMLN*RGASAE
Trigger: CTCAGCTGATGCACCCCGCAAGTTCAACATGAAGAT...AACTTTTGACGTCCTGATGGCTCCAGGGCCTTCTTCCAACTCAGTTTCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053568.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGGCAAACTCGTCCTGGTaGAGTGTCTTGATGCGGTTT +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLANSSW*SVLMRF
Trigger: AAACCGCATCAAGACACTCAACCAGGACGAGTTTGC...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGAAGTCCTTGAACTCTTaGCCCTGGACGAACTCAGGT +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLKSLNS*PWTNSG
Trigger: ACCTGAGTTCGTCCAGGGCAAAGAGTTCAAGGACTT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGATCTTCATGTTGAACTaGCGGGGTGCATCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLIFMLN*RGASAE
Trigger: CTCAGCTGATGCACCCCGCAAGTTCAACATGAAGAT...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS-3UTR CAA 90 bp TTAATTGAATTATTGACTCTGCCGCGTGTTGGTTCGTCGGCTTTGTCAACTCTGCATATCATCTTCATGTaGAACTTGCGGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: LIELLTLPRVGSSALSTLHIIFM*NLRGAS
Trigger: TGATGCACCCCGCAAGTTCAACATGAAGATGATATG...CAGAGTTGACAAAGCCGACGAACCAACACGCGGCAGAGTCAATAATTCAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp CGGTGGGGATGCCCTCGGGCACCGCCACAAAGCGTTTaGGGTGGCAGAGCACGGCTCGGTCCTGCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RWGCPRAPPQSV*GGRARLGPALS
Trigger: GCTCAGCGCAGGACCGAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGTGCCCGAGGGCATCCCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp AGGCGAGTCTCGGTGGGGATGCCCTCGGGCACCGCCACAAAGCGTTaGCGGTGGCAGAGCACGGCTCGGTCCTGCGCTGAGCACTCGCAG +
Preference number: 6 (lower is better)
Translates to: RRVSVGMPSGTATKR*RWQSTARSCAEHSQ
Trigger: CTGCGAGTGCTCAGCGCAGGACCGAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGTGCCCGAGGGCATCCCCACCGAGACTCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp GGGATGCCCTCGGGCACCGCCACAAAGCGTTTGCGGTaGCAGAGCACGGCTCGGTCCTGCGCTGAGCACTCG +
Preference number: 6 (lower is better)
Translates to: GMPSGTATKRLR*QSTARSCAEHS
Trigger: CGAGTGCTCAGCGCAGGACCGAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGTGCCCGAGGGCATCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp TCGGTGGGGATGCCCTCGGGCACCGCCACAAAGCGTTaGCGGTGGCAGAGCACGGCTCGGTCCTGCGCTGAG +
Preference number: 6 (lower is better)
Translates to: SVGMPSGTATKR*RWQSTARSCAE
Trigger: CTCAGCGCAGGACCGAGCCGTGCTCTGCCACCGCAAACGCTTTGTGGCGGTGCCCGAGGGCATCCCCACCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp TTGCCCTGGACGAACTCAGGTGTGGCGCAGGTGGGCTGCTGCCTGTaGAAGTTGAGCCGCCAGCGGCGCCGGAACACCCACAGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: LPWTNSGVAQVGCCL*KLSRQRRRNTHSSR
Trigger: CCGGCTGCTGTGGGTGTTCCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCCAGGGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp CCCTGGACGAACTCAGGTGTGGCGCAGGTGGGCTGCTaGCTGTTGAAGTTGAGCCGCCAGCGGCGCCGGAAC +
Preference number: 6 (lower is better)
Translates to: PWTNSGVAQVGC*LLKLSRQRRRN
Trigger: GTTCCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp TTGCCCTGGACGAACTCAGGTGTGGCGCAGGTGGGCTaGTGCCTGTTGAAGTTGAGCCGCCAGCGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: LPWTNSGVAQVG*CLLKLSRQRRR
Trigger: CCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCCAGGGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp TCAGGTGTGGCGCAGGTGGGCTGCTGCCTGTTGAAGTaGAGCCGCCAGCGGCGCCGGAACACCCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: SGVAQVGCCLLK*SRQRRRNTHSS
Trigger: GCTGCTGTGGGTGTTCCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCACACCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp TGGACGAACTCAGGTGTGGCGCAGGTGGGCTGCTGCCTGTTGAAGTaGAGCCGCCAGCGGCGCCGGAACACCCACAGCAGCCGGCAGTCA +
Preference number: 6 (lower is better)
Translates to: WTNSGVAQVGCCLLK*SRQRRRNTHSSRQS
Trigger: TGACTGCCGGCTGCTGTGGGTGTTCCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp CTGCACCGTGTGGCCCTCATCTACAAACACCTGCTGTaGCTTGCGGTCCCGGATGTGGGCCCGGCGGCAGGT +
Preference number: 6 (lower is better)
Translates to: LHRVALIYKHLL*LAVPDVGPAAG
Trigger: ACCTGCCGCCGGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGAGGGCCACACGGTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp GCAGGAGGATGGGCTGCCAGCAGGCCAGGAGGGGGCTaGGCATGCTTCTCATACCCCCTGCCAGCATCCTCT +
Preference number: 6 (lower is better)
Translates to: AGGWAASRPGGG*ACFSYPLPASS
Trigger: AGAGGATGCTGGCAGGGGGTATGAGAAGCATGCCCAGCCCCCTCCTGGCCTGCTGGCAGCCCATCCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000114256.2
CDS CAA 72 bp ACGAACTCAGGTGTGGCGCAGGTGGGCTGCTGCCTGTaGAAGTTGAGCCGCCAGCGGCGCCGGAACACCCAC +
Preference number: 6 (lower is better)
Translates to: TNSGVAQVGCCL*KLSRQRRRNTH
Trigger: GTGGGTGTTCCGGCGCCGCTGGCGGCTCAACTTCAACAGGCAGCAGCCCACCTGCGCCACACCTGAGTTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp ACCGTGTGGCCCTCATCTACAAACACCTGCTGTGCCTaGCGGTCCCGGATGTGGGCCCGGCGGCAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: TVWPSSTNTCCA*RSRMWARRQVK
Trigger: CTTCACCTGCCGCCGGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGAGGGCCACACGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 72 bp GCCGGCAGTCACAGGCCAGTGGGTTGGAGTCCAGGATaGGCGTCTCCAGGTTGCCCACCGAATGGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: AGSHRPVGWSPG*ASPGCPPNGRL
Trigger: CAGCCTTCCATTCGGTGGGCAACCTGGAGACGCTCATCCTGGACTCCAACCCACTGGCCTGTGACTGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp ACAAACTGCACCGTGTGGCCCTCATCTACAAACACCTaGTGTGCCTTGCGGTCCCGGATGTGGGCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: TNCTVWPSSTNT*CALRSRMWARR
Trigger: CCGCCGGGCCCACATCCGGGACCGCAAGGCACAGCAGGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp CGTTGCCGCCAGCATTGGCTGCGATGCACAGGTACGTaGCGTTGTCCTGTACCTGGGCGTAGCGCACCTCCA +
Preference number: 6 (lower is better)
Translates to: RCRQHWLRCTGT*RCPVPGRSAPP
Trigger: TGGAGGTGCGCTACGCCCAGGTACAGGACAACGGCACGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp CGGGCATGGAGTCGTTGCCGCCAGCATTGGCTGCGATaGACAGGTACGTGCCGTTGTCCTGTACCTGGGCGT +
Preference number: 6 (lower is better)
Translates to: RAWSRCRQHWLR*TGTCRCPVPGR
Trigger: ACGCCCAGGTACAGGACAACGGCACGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp AGCTGCGCACATGCAAGTGGGCGGGCATGGAGTCGTTaGCGCCAGCATTGGCTGCGATGCACAGGTACGTGC +
Preference number: 6 (lower is better)
Translates to: SCAHASGRAWSR*RQHWLRCTGTC
Trigger: GCACGTACCTGTGCATCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGCATGTGCGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp CAGGCGAGTAGCTGCGCACATGCAAGTGGGCGGGCATaGAGTCGTTGCCGCCAGCATTGGCTGCGATGCACA +
Preference number: 6 (lower is better)
Translates to: QASSCAHASGRA*SRCRQHWLRCT
Trigger: TGTGCATCGCAGCCAATGCTGGCGGCAACGACTCCATGCCCGCCCACTTGCATGTGCGCAGCTACTCGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp CACAGTGGCGCGGGTGCTGTTGGCCTCTCCCTCGCCTaGCTGGTTGGAGATGAAGGCGAAGGTCTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: HSGAGAVGLSLA*LVGDEGEGLVG
Trigger: CCCAACAAGACCTTCGCCTTCATCTCCAACCAGCCAGGCGAGGGAGAGGCCAACAGCACCCGCGCCACTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp TTCAGGCGGTTGCTGCGCAGCCCCAGAGTCCTCAGGTaGAAGAGGTTGTTGAAGGCGCCTGGCTCCACGGCG +
Preference number: 6 (lower is better)
Translates to: FRRLLRSPRVLR*KRLLKAPGSTA
Trigger: CGCCGTGGAGCCAGGCGCCTTCAACAACCTCTTCAACCTGAGGACTCTGGGGCTGCGCAGCAACCGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp CCGGTGAAGACGCCCAGCGGGATAAGCTTCAGGCGGTaGCTGCGCAGCCCCAGAGTCCTCAGGTTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: PVKTPSGISFRR*LRSPRVLRLKR
Trigger: CCTCTTCAACCTGAGGACTCTGGGGCTGCGCAGCAACCGCCTGAAGCTTATCCCGCTGGGCGTCTTCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp GGGATAAGCTTCAGGCGGTTGCTGCGCAGCCCCAGAGTCCTCAGGTaGAAGAGGTTGTTGAAGGCGCCTGGCTCCACGGCGCTCACGATG +
Preference number: 6 (lower is better)
Translates to: GISFRRLLRSPRVLR*KRLLKAPGSTALTM
Trigger: CATCGTGAGCGCCGTGGAGCCAGGCGCCTTCAACAACCTCTTCAACCTGAGGACTCTGGGGCTGCGCAGCAACCGCCTGAAGCTTATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp CAGTCACAGGCCAGTGGGTTGGAGTCCAGGATGAGCGTCTCCAGGTaGCCCACCGAATGGAAGGCTGACTCCTCCAGGGTGGTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: QSQASGLESRMSVSR*PTEWKADSSRVVSW
Trigger: CCAGCTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCTGGAGACGCTCATCCTGGACTCCAACCCACTGGCCTGTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 72 bp GTGCCTTGCGGTCCCGGATGTGGGCCCGGCGGCAGGTaGAGTAGTTGGGTAGGAGTACATCCGGAAAGTCCT +
Preference number: 6 (lower is better)
Translates to: VPCGPGCGPGGR*SSWVGVHPESP
Trigger: AGGACTTTCCGGATGTACTCCTACCCAACTACTTCACCTGCCGCCGGGCCCACATCCGGGACCGCAAGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 72 bp CGTAGCGCACCTCCAGCGTGCCATCAGGGAAGACTGTaGGCCGCCCATTGCTCTTGGCCGAGACCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: RSAPPACHQGRL*AAHCSWPRPSA
Trigger: AGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATGGCACGCTGGAGGTGCGCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp GCCAGTGGGTTGGAGTCCAGGATGAGCGTCTCCAGGTaGCCCACCGAATGGAAGGCTGACTCCTCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: ASGLESRMSVSR*PTEWKADSSRV
Trigger: CACCCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCTGGAGACGCTCATCCTGGACTCCAACCCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp GTGAGCCGCCCATTGCTCTTGGCCGAGACCAAGTGCTaGCGGGGTGAGAGCCAAAGGATAGCTGGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: VSRPLLLAETKC*RGESQRIAGGG
Trigger: CCCTCCACCAGCTATCCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp TCCAGCGTGCCATCAGGGAAGACTGTGAGCCGCCCATaGCTCTTGGCCGAGACCAAGTGCTTGCGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: SSVPSGKTVSRP*LLAETKCLRGE
Trigger: CTCACCCCGCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATGGCACGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp GGGAAGACTGTGAGCCGCCCATTGCTCTTGGCCGAGACCAAGTGCTaGCGGGGTGAGAGCCAAAGGATAGCTGGTGGAGGGTCGCCATCT +
Preference number: 6 (lower is better)
Translates to: GKTVSRPLLLAETKC*RGESQRIAGGGSPS
Trigger: AGATGGCGACCCTCCACCAGCTATCCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 72 bp GATGAGCGTCTCCAGGTTGCCCACCGAATGGAAGGCTaGCTCCTCCAGGGTGGTCAGCTGGTTGCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: DERLQVAHRMEG*LLQGGQLVARD
Trigger: GTCTCTGGCAACCAGCTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCTGGAGACGCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp TCTTGTTGGGTTGATGGGGCCAGTCAGGCGAGTAGCTaGGCACATGCAAGTGGGCGGGCATGGAGTCGTTGC +
Preference number: 6 (lower is better)
Translates to: SCWVDGASQASS*AHASGRAWSRC
Trigger: GCAACGACTCCATGCCCGCCCACTTGCATGTGCGCAGCTACTCGCCTGACTGGCCCCATCAACCCAACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp GAGTCCAGGATGAGCGTCTCCAGGTTGCCCACCGAATaGAAGGCTGACTCCTCCAGGGTGGTCAGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: ESRMSVSRLPTE*KADSSRVVSWL
Trigger: CAACCAGCTGACCACCCTGGAGGAGTCAGCCTTCCATTCGGTGGGCAACCTGGAGACGCTCATCCTGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp GGGTCGCCATCTGCCCGGCATACAAACTGCACCGTGTaGCCCTCATCTACAAACACCTGCTGTGCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: GSPSARHTNCTV*PSSTNTCCALR
Trigger: CCGCAAGGCACAGCAGGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGCAGATGGCGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp GTGCCATCAGGGAAGACTGTGAGCCGCCCATTGCTCTaGGCCGAGACCAAGTGCTTGCGGGGTGAGAGCCAA +
Preference number: 6 (lower is better)
Translates to: VPSGKTVSRPLL*AETKCLRGESQ
Trigger: TTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp ACCTCCAGCGTGCCATCAGGGAAGACTGTGAGCCGCCCATTGCTCTaGGCCGAGACCAAGTGCTTGCGGGGTGAGAGCCAAAGGATAGCT +
Preference number: 6 (lower is better)
Translates to: TSSVPSGKTVSRPLL*AETKCLRGESQRIA
Trigger: AGCTATCCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGTCTTCCCTGATGGCACGCTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp CCCAGGAAGGAGATGAAGCCCATGGTGGTGGCGATAATGAGCGTCTaGATGTCGAAGGGGAAAGGCACAGTGGCGCGGGTGCTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: PRKEMKPMVVAIMSV*MSKGKGTVARVLLA
Trigger: GGCCAACAGCACCCGCGCCACTGTGCCTTTCCCCTTCGACATCAAGACGCTCATTATCGCCACCACCATGGGCTTCATCTCCTTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 72 bp TGCTGTTGGCCTCTCCCTCGCCTGGCTGGTTGGAGATaGAGGCGAAGGTCTTGTTGGGTTGATGGGGCCAGT +
Preference number: 6 (lower is better)
Translates to: CCWPLPRLAGWR*RRRSCWVDGAS
Trigger: ACTGGCCCCATCAACCCAACAAGACCTTCGCCTTCATCTCCAACCAGCCAGGCGAGGGAGAGGCCAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp CCCACCAGCTGGATCTCCTGCAACCGCAGCAGCTCATaGAGCATGGAGCCCTCGATTGTACCGATTGGGTTG +
Preference number: 6 (lower is better)
Translates to: PTSWISCNRSSS*SMEPSIVPIGL
Trigger: CAACCCAATCGGTACAATCGAGGGCTCCATGCTGCATGAGCTGCTGCGGTTGCAGGAGATCCAGCTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp GCTGGTGGAGGGTCGCCATCTGCCCGGCATACAAACTaGACCGTGTGGCCCTCATCTACAAACACCTGCTGT +
Preference number: 6 (lower is better)
Translates to: AGGGSPSARHTN*TVWPSSTNTCC
Trigger: ACAGCAGGTGTTTGTAGATGAGGGCCACACGGTGCAGTTTGTATGCCGGGCAGATGGCGACCCTCCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp ACTGTGAGCCGCCCATTGCTCTTGGCCGAGACCAAGTaGTTGCGGGGTGAGAGCCAAAGGATAGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: TVSRPLLLAETK*LRGESQRIAGG
Trigger: TCCACCAGCTATCCTTTGGCTCTCACCCCGCAAGCACTTGGTCTCGGCCAAGAGCAATGGGCGGCTCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp TTCAGGCGGTTGCTGCGCAGCCCCAGAGTCCTCAGGTTGAAGAGGTaGTTGAAGGCGCCTGGCTCCACGGCGCTCACGATGTTTTCATTG +
Preference number: 6 (lower is better)
Translates to: FRRLLRSPRVLRLKR*LKAPGSTALTMFSL
Trigger: CAATGAAAACATCGTGAGCGCCGTGGAGCCAGGCGCCTTCAACAACCTCTTCAACCTGAGGACTCTGGGGCTGCGCAGCAACCGCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp AGGAGTACATCCGGAAAGTCCTTGAACTCTTTGCCCTaGACGAACTCAGGTGTGGCGCAGGTGGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RSTSGKSLNSLP*TNSGVAQVGCC
Trigger: GCAGCAGCCCACCTGCGCCACACCTGAGTTCGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATGTACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp AAGGCGCCTGGCTCCACGGCGCTCACGATGTTTTCATaGAGTTCTAGCTCCTCCAGGTGTGGGAAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: KAPGSTALTMFS*SSSSSRCGKLA
Trigger: TGCCAGCTTCCCACACCTGGAGGAGCTAGAACTCAATGAAAACATCGTGAGCGCCGTGGAGCCAGGCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp TGGCTGGTTGGAGATGAAGGCGAAGGTCTTGTTGGGTaGATGGGGCCAGTCAGGCGAGTAGCTGCGCACATG +
Preference number: 6 (lower is better)
Translates to: WLVGDEGEGLVG*MGPVRRVAAHM
Trigger: CATGTGCGCAGCTACTCGCCTGACTGGCCCCATCAACCCAACAAGACCTTCGCCTTCATCTCCAACCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp GAGATGAAGCCCATGGTGGTGGCGATAATGAGCGTCTaGATGTCGAAGGGGAAAGGCACAGTGGCGCGGGTG +
Preference number: 6 (lower is better)
Translates to: EMKPMVVAIMSV*MSKGKGTVARV
Trigger: CACCCGCGCCACTGTGCCTTTCCCCTTCGACATCAAGACGCTCATTATCGCCACCACCATGGGCTTCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp AGTTCTAGCTCCTCCAGGTGTGGGAAGCTGGCAAACTCGTCCTGGTaGAGTGTCTTGATGCGGTTTTTGCCCAGGTCCAGCAGGCGAGTC +
Preference number: 6 (lower is better)
Translates to: SSSSSRCGKLANSSW*SVLMRFLPRSSRRV
Trigger: GACTCGCCTGCTGGACCTGGGCAAAAACCGCATCAAGACACTCAACCAGGACGAGTTTGCCAGCTTCCCACACCTGGAGGAGCTAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp AGGTTGTTGAAGGCGCCTGGCTCCACGGCGCTCACGATGTTTTCATaGAGTTCTAGCTCCTCCAGGTGTGGGAAGCTGGCAAACTCGTCC +
Preference number: 6 (lower is better)
Translates to: RLLKAPGSTALTMFS*SSSSSRCGKLANSS
Trigger: GGACGAGTTTGCCAGCTTCCCACACCTGGAGGAGCTAGAACTCAATGAAAACATCGTGAGCGCCGTGGAGCCAGGCGCCTTCAACAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 90 bp AGCAGGATGACGATCTTGTTCTCACTGATGTCCAGCTTGGTCAAGTaGCTGAGGCCGGTGAAGACGCCCAGCGGGATAAGCTTCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SRMTILFSLMSSLVK*LRPVKTPSGISFRR
Trigger: CCGCCTGAAGCTTATCCCGCTGGGCGTCTTCACCGGCCTCAGCAACTTGACCAAGCTGGACATCAGTGAGAACAAGATCGTCATCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS GCA 72 bp AAGGTTGAGGAAACGGAGATAGACCAGGTGACGCACTaGCAGATAGGGCACGGCTGTCAGGTTGCAGTGCGT +
Preference number: 6 (lower is better)
Translates to: KVEETEIDQVTH*QIGHGCQVAVR
Trigger: ACGCACTGCAACCTGACAGCCGTGCCCTATCTGGCAGTGCGTCACCTGGTCTATCTCCGTTTCCTCAACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp AGCTCCTCCAGGTGTGGGAAGCTGGCAAACTCGTCCTaGTTGAGTGTCTTGATGCGGTTTTTGCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SSSRCGKLANSS*LSVLMRFLPRS
Trigger: GGACCTGGGCAAAAACCGCATCAAGACACTCAACCAGGACGAGTTTGCCAGCTTCCCACACCTGGAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp TCCTCCAGGTGTGGGAAGCTGGCAAACTCGTCCTGGTaGAGTGTCTTGATGCGGTTTTTGCCCAGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSRCGKLANSSW*SVLMRFLPRSS
Trigger: GCTGGACCTGGGCAAAAACCGCATCAAGACACTCAACCAGGACGAGTTTGCCAGCTTCCCACACCTGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp TTGGGTAGGAGTACATCCGGAAAGTCCTTGAACTCTTaGCCCTGGACGAACTCAGGTGTGGCGCAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: LGRSTSGKSLNS*PWTNSGVAQVG
Trigger: GCCCACCTGCGCCACACCTGAGTTCGTCCAGGGCAAAGAGTTCAAGGACTTTCCGGATGTACTCCTACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp GCTGGATCTCCTGCAACCGCAGCAGCTCATGCAGCATaGAGCCCTCGATTGTACCGATTGGGTTGTAGGAAA +
Preference number: 6 (lower is better)
Translates to: AGSPATAAAHAA*SPRLYRLGCRK
Trigger: TTTCCTACAACCCAATCGGTACAATCGAGGGCTCCATGCTGCATGAGCTGCTGCGGTTGCAGGAGATCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp ACGATCTTGTTCTCACTGATGTCCAGCTTGGTCAAGTaGCTGAGGCCGGTGAAGACGCCCAGCGGGATAAGC +
Preference number: 6 (lower is better)
Translates to: TILFSLMSSLVK*LRPVKTPSGIS
Trigger: GCTTATCCCGCTGGGCGTCTTCACCGGCCTCAGCAACTTGACCAAGCTGGACATCAGTGAGAACAAGATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CAA 72 bp AGCAGGATGACGATCTTGTTCTCACTGATGTCCAGCTaGGTCAAGTTGCTGAGGCCGGTGAAGACGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SRMTILFSLMSS*VKLLRPVKTPS
Trigger: GCTGGGCGTCTTCACCGGCCTCAGCAACTTGACCAAGCTGGACATCAGTGAGAACAAGATCGTCATCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp CAGAGTCCTCAGGTTGAAGAGGTTGTTGAAGGCGCCTaGCTCCACGGCGCTCACGATGTTTTCATTGAGTTC +
Preference number: 6 (lower is better)
Translates to: QSPQVEEVVEGA*LHGAHDVFIEF
Trigger: GAACTCAATGAAAACATCGTGAGCGCCGTGGAGCCAGGCGCCTTCAACAACCTCTTCAACCTGAGGACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS TCA 72 bp TATCATCTTCATGTTGAACTTGCGGGGTGCATCAGCTaGGCTGATGCCTGCGTCCGATTTCCGGGGCACATA +
Preference number: 6 (lower is better)
Translates to: YHLHVELAGCIS*ADACVRFPGHI
Trigger: TATGTGCCCCGGAAATCGGACGCAGGCATCAGCTCAGCTGATGCACCCCGCAAGTTCAACATGAAGATGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2
CDS CCA 72 bp CAGCTCATGCAGCATGGAGCCCTCGATTGTACCGATTaGGTTGTAGGAAAGGTTGAGGAAACGGAGATAGAC +
Preference number: 6 (lower is better)
Translates to: QLMQHGALDCTD*VVGKVEETEID
Trigger: GTCTATCTCCGTTTCCTCAACCTTTCCTACAACCCAATCGGTACAATCGAGGGCTCCATGCTGCATGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053568.2
ENSMUST00000114247.2
ENSMUST00000114256.2
ENSMUST00000210032.2