Pregenerated sensors for LIN9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058729Ensembl transcript IDs: ENSMUST00000192561.6, ENSMUST00000192725.6, ENSMUST00000193892.6, ENSMUST00000194638.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACGATTTCCTGGGCTTCTTCCTCACACCTCCGTCTCATGTCTGTTaGCTGATCGGCAGGCTGGAGTCCCTGGTCTGGTGCAAGCTCATA | + |
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Preference number: 1 (lower is better) Translates to: DDFLGFFLTPPSHVC*LIGRLESLVWCKLI Trigger: TATGAGCTTGCACCAGACCAGGGACTCCAGCCTGCCGATCAGCCAACAGACATGAGACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR CCA 90 bp | CCGTCAGATTTTCGTTTTCTACACAGGGCTGTCCGGAAGCAGAGTTaGCTTGCCGGACGATTTCCTGGGCTTCTTCCTCACACCTCCGTC | + |
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Preference number: 1 (lower is better) Translates to: PSDFRFLHRAVRKQS*LAGRFPGLLPHTSV Trigger: GACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGAAAACGAAAATCTGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR GCA 90 bp | AGATTTTCGTTTTCTACACAGGGCTGTCCGGAAGCAGAGTTGGCTTaGCGGACGATTTCCTGGGCTTCTTCCTCACACCTCCGTCTCATG | + |
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Preference number: 1 (lower is better) Translates to: RFSFSTQGCPEAELA*RTISWASSSHLRLM Trigger: CATGAGACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGAAAACGAAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR CCA 90 bp | GCAGCTGGGTACCAGAATCCTGTGCTCAGTCTCTGTTCGTGTTGTTaGCTGCAAAGGCGTGTAAGTTTCCCATCTGACTCAGGCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: AAGYQNPVLSLCSCC*LQRRVSFPSDSGHS Trigger: AGAGTGGCCTGAGTCAGATGGGAAACTTACACGCCTTTGCAGCCAACAACACGAACAGAGACTGAGCACAGGATTCTGGTACCCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR CCA 90 bp | AGTTCTCCGGTTTTCCAGCAGCTAGGTTATCTGGTGTTGGAAGCATaGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSPVFQQLGYLVLEA*VKDQDSSDHGCVQL Trigger: CAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACACCAGATAACCTAGCTGCTGGAAAACCGGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR CCA 90 bp | TCCACTGGACCGGTGACTCTCGGATGGGATTCCCACCATCATGCATaGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: STGPVTLGWDSHHHA*KDRASSCSLSVTGV Trigger: GACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAGTCACCGGTCCAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR GCA 90 bp | AACGTCTCCGTGTCAGAGCCAGAAACTTTACTTCTCCAAGGTGACTaGCCCAGTAAAGGATCGCCATCTGTAATTGGTGACTGGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: NVSVSEPETLLLQGD*PSKGSPSVIGDWRG Trigger: TCCTCTCCAGTCACCAATTACAGATGGCGATCCTTTACTGGGGCAGTCACCTTGGAGAAGTAAAGTTTCTGGCTCTGACACGGAGACGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000193892.6 ENSMUST00000194638.2 |
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| 3UTR GCA 90 bp | TTTGTTCAGGTCCTTGTTCAGCTGCTCAAGCTCCAGGACGATCGTTaGGTATCTCCGCTGAAACTCAATGCCAATGGGCATGGAATAGGA | + |
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Preference number: 1 (lower is better) Translates to: FVQVLVQLLKLQDDR*VSPLKLNANGHGIG Trigger: TCCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGCTTGAGCAGCTGAACAAGGACCTGAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR GCA 90 bp | GCTCAAGCTCCAGGACGATCGTTGCGTATCTCCGCTGAAACTCAATaGCAATGGGCATGGAATAGGATTTCAGCTTTTCTGCTTCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: AQAPGRSLRISAETQ*QWAWNRISAFLLLC Trigger: ACACAGAAGCAGAAAAGCTGAAATCCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGCTTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR TCA 90 bp | TCTCTGTTCGTGTTGTTGGCTGCAAAGGCGTGTAAGTTTCCCATCTaGCTCAGGCCACTCTGGATATGTGCAACATGGATTTCTACGTTA | + |
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Preference number: 1 (lower is better) Translates to: SLFVLLAAKACKFPI*LRPLWICATWISTL Trigger: TAACGTAGAAATCCATGTTGCACATATCCAGAGTGGCCTGAGTCAGATGGGAAACTTACACGCCTTTGCAGCCAACAACACGAACAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR GCA 90 bp | GTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATaGATAAAACAGTGGTTTATCCTCCATGGGATAGTACGTTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: VCHRSRLHVLSRIHA*IKQWFILHGIVRSE Trigger: CTCTGAACGTACTATCCCATGGAGGATAAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCTGTGACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR CAA 90 bp | GGACGATTTCCTGGGCTTCTTCCTCACACCTCCGTCTCATGTCTGTaGGCTGATCGGCAGGCTGGAGTCCCTGGTCTGGTGCAAGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: GRFPGLLPHTSVSCL*ADRQAGVPGLVQAH Trigger: ATGAGCTTGCACCAGACCAGGGACTCCAGCCTGCCGATCAGCCAACAGACATGAGACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR CAA 90 bp | TCCGTCAGATTTTCGTTTTCTACACAGGGCTGTCCGGAAGCAGAGTaGGCTTGCCGGACGATTTCCTGGGCTTCTTCCTCACACCTCCGT | + |
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Preference number: 2 (lower is better) Translates to: SVRFSFSTQGCPEAE*ACRTISWASSSHLR Trigger: ACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGAAAACGAAAATCTGACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCCTCATGTCTGTTGGCTaGTCGGCAGGCTGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KDRASSCSLSVTGVVCMCLMSVG*SAGWSP Trigger: GGGACTCCAGCCTGCCGATCAGCCAACAGACATGAG...GCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTACCAGAATCCTGTGCTCAGTCTCTGTTCGTGTTGTTGGCTGCAAAGGCTGCCGGACGATTTCCTaGGCTTCTTCCTCACACCTC | + |
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Preference number: 2 (lower is better) Translates to: LGTRILCSVSVRVVGCKGCRTIS*ASSSHL Trigger: GAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCA...GCCTTTGCAGCCAACAACACGAACAGAGACTGAGCACAGGATTCTGGTACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR CAA 90 bp | CAGATTTTCGTTTTCTACACAGGGCTGTCCGGAAGCAGAGTTGGCTaGCCGGACGATTTCCTGGGCTTCTTCCTCACACCTCCGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QIFVFYTGLSGSRVG*PDDFLGFFLTPPSH Trigger: ATGAGACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGAAAACGAAAATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | AAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGGACTCCTCAGACCATaGCTGTGTGCAGCTGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: KTVLLHVLCLSQESSACAGLLRP*LCAAGY Trigger: GTACCCAGCTGCACACAGCCATGGTCTGAGGAGTCC...AGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR GCA 90 bp | AACGTCTCCGTGTCAGAGCCAGAAACTTTACTTCTCCAAGGTGACTGCCCCAGTCTTCTCCAAGGTGACTaGCCCAGTAAAGGATCGCCA | + |
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Preference number: 2 (lower is better) Translates to: NVSVSEPETLLLQGDCPSLLQGD*PSKGSP Trigger: TGGCGATCCTTTACTGGGGCAGTCACCTTGGAGAAG...ACTGGGGCAGTCACCTTGGAGAAGTAAAGTTTCTGGCTCTGACACGGAGACGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193892.6 ENSMUST00000194638.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGTGACTGCCCCAGTAAAGGATCGCCATCTGTAATTGGTGACTGGAGAGGACTTCTCCAAGGTGACTaGCCCAGTAAAGGATCGCCA | + |
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Preference number: 2 (lower is better) Translates to: QGDCPSKGSPSVIGDWRGLLQGD*PSKGSP Trigger: TGGCGATCCTTTACTGGGGCAGTCACCTTGGAGAAG...TCCTCTCCAGTCACCAATTACAGATGGCGATCCTTTACTGGGGCAGTCACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193892.6 ENSMUST00000194638.2 |
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| 3UTR CAA 90 bp | CTTTGTTCAGGTCCTTGTTCAGCTGCTCAAGCTCCAGGACGATCGTaGCGTATCTCCGCTGAAACTCAATGCCAATGGGCATGGAATAGG | + |
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Preference number: 2 (lower is better) Translates to: LCSGPCSAAQAPGRS*RISAETQCQWAWNR Trigger: CCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGCTTGAGCAGCTGAACAAGGACCTGAACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR CAA 90 bp | GAGATGTACAGTTCTCCGGTTTTCCAGCAGCTAGGTTATCTGGTGTaGGAAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: EMYSSPVFQQLGYLV*EAWVKDQDSSDHGC Trigger: ACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACACCAGATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR GCA 90 bp | GGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCAGACCATGGCTGTGTaGAGCTGGGTACCAGAATCC | + |
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Preference number: 2 (lower is better) Translates to: GFPPSCMERPCFFMFSVCQTMAV*SWVPES Trigger: GGATTCTGGTACCCAGCTGCACACAGCCATGGTCTG...ACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTGGGTACCAGAATCCTGTGCTCAGTCTCTGTTCGTGTTGTTGGCTGCAATCCAAAGGCAGAGATTaGCATTGTCTCATGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: AAGYQNPVLSLCSCCWLQSKGRD*HCLMRL Trigger: GAGCCTCATGAGACAATGCCAATCTCTGCCTTTGGA...TTGCAGCCAACAACACGAACAGAGACTGAGCACAGGATTCTGGTACCCAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCCTGGTGTTGGAAGCATaGGTTAAGGACCAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: KDRASSCSLSVTGVVCMCLVLEA*VKDQDS Trigger: GGAGTCCTGGTCCTTAACCCATGCTTCCAACACCAG...GCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAGAGTTGGCTTGCCGGACGATTTCCTGGGCTTCTTCCTCACACCTCCGTGAAACTCAATGCCAATaGGCATGGAATAGGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: EAELACRTISWASSSHLRETQCQ*AWNRIS Trigger: TGAAATCCTATTCCATGCCCATTGGCATTGAGTTTC...ACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | GGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCTGGTGTTGGAAGCATaGGTTAAGGACCAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GFPPSCMERPCFFMFSVCLVLEA*VKDQDS Trigger: GGAGTCCTGGTCCTTAACCCATGCTTCCAACACCAG...ACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | AAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTCTCTGTTCGTGTTGTTaGCTGCAAAGGCGTGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: KTVLLHVLCLSQESSACALCSCC*LQRRVS Trigger: ACTTACACGCCTTTGCAGCCAACAACACGAACAGAG...AGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTGCCATCTGTAATTGGTaGCTGGAGAGGAGGGGTATA | + |
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Preference number: 2 (lower is better) Translates to: RSRLHVLSRIHACIKQWFAICNW*LERRGI Trigger: TATACCCCTCCTCTCCAGTCACCAATTACAGATGGC...AAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR GCA 90 bp | CTCTCGGATGGGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTGCCACTCTGGATATGTaGAACATGGATTTCTACGTT | + |
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Preference number: 2 (lower is better) Translates to: LSDGIPTIMHGKTVLLHVATLDM*NMDFYV Trigger: AACGTAGAAATCCATGTTGCACATATCCAGAGTGGC...AACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | AAATATAAACTCTGCACTAAGATCTGCAGTGGCCCAATACCAACAAAGAACACAGGACTCCTCAGACCATaGCTGTGTGCAGCTGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: KYKLCTKICSGPIPTKNTGLLRP*LCAAGY Trigger: GTACCCAGCTGCACACAGCCATGGTCTGAGGAGTCC...TGTGTTCTTTGTTGGTATTGGGCCACTGCAGATCTTAGTGCAGAGTTTATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTCGGATGGGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTTTAAAAAGCCGTATCTaGAGATGTACAGTTCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: LSDGIPTIMHGKTVLLHVLKSRI*RCTVLR Trigger: CCGGAGAACTGTACATCTCCAGATACGGCTTTTTAA...AACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCGTGTCAGAGCCAGAAACTTTACTTCTCCAAGGTGACTGCCCCAGTAAAATTGGCATTGTCTCATaGGGCTCATTACTAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: VSVSEPETLLLQGDCPSKIGIVS*GSLLRT Trigger: AGTTCTTAGTAATGAGCCTCATGAGACAATGCCAAT...TTTACTGGGGCAGTCACCTTGGAGAAGTAAAGTTTCTGGCTCTGACACGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194638.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCGGATGGGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTAGAACAATAAATAAATaGTGGTCAGCACAATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSDGIPTIMHGKTVLLHVRTINK*WSAQCW Trigger: CCAGCATTGTGCTGACCAGCATTTATTTATTGTTCT...AACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGTCCAAAGGCAGAGATTGGCATTGTCTCATGAGGCTCATTACTAAGAACTCCAAAGGCAGAGATTaGCATTGTCTCATGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: FLSKGRDWHCLMRLITKNSKGRD*HCLMRL Trigger: GAGCCTCATGAGACAATGCCAATCTCTGCCTTTGGA...GTTCTTAGTAATGAGCCTCATGAGACAATGCCAATCTCTGCCTTTGGACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194638.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTTTAAAAAGCCGTATCTaGAGATGTACAGTTCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: RSRLHVLSRIHACIKQWFLKSRI*RCTVLR Trigger: CCGGAGAACTGTACATCTCCAGATACGGCTTTTTAA...AAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCGGCTCCTTCATTTCCTCTGCTGATAAACAACAAAGCTTTTATAAATTATCCGCTGAAACTCAATaGCAATGGGCATGGAATAGG | + |
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Preference number: 2 (lower is better) Translates to: SSGSFISSADKQQSFYKLSAETQ*QWAWNR Trigger: CCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGA...TAATTTATAAAAGCTTTGTTGTTTATCAGCAGAGGAAATGAAGGAGCCGGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | AAATATAAACTCTGCACTAAGATCTGCAGTGGCCCAATACCAACAAAGAACACAGATAACTTAGTCACCTaGATAAGGAATTCCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: KYKLCTKICSGPIPTKNTDNLVT*IRNSTG Trigger: TCCAGTGGAATTCCTTATCCAGGTGACTAAGTTATC...TGTGTTCTTTGTTGGTATTGGGCCACTGCAGATCTTAGTGCAGAGTTTATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | CTCCATGGGATAGTACGTTCAGAGAGTTTCCGGTTAAAAATGTTTGCTGATAAACAATGCCAATGGGCATaGAATAGGATTTCAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LHGIVRSESFRLKMFADKQCQWA*NRISAF Trigger: AAAAGCTGAAATCCTATTCCATGCCCATTGGCATTG...TTTATCAGCAAACATTTTTAACCGGAAACTCTCTGAACGTACTATCCCATGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CCA 90 bp | AAATATAAACTCTGCACTAAGATCTGCAGTGGCCCAATACCAACAAAGAACACAACAATAAATAAATGCTaGTCAGCACAATGCTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: KYKLCTKICSGPIPTKNTTINKC*SAQCWL Trigger: CAACCAGCATTGTGCTGACCAGCATTTATTTATTGT...TGTGTTCTTTGTTGGTATTGGGCCACTGCAGATCTTAGTGCAGAGTTTATATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| 3UTR CCA 72 bp | CTGGGCTTCTTCCTCACACCTCCGTCTCATGTCTGTTaGCTGATCGGCAGGCTGGAGTCCCTGGTCTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: LGFFLTPPSHVC*LIGRLESLVWC Trigger: GCACCAGACCAGGGACTCCAGCCTGCCGATCAGCCAACAGACATGAGACGGAGGTGTGAGGAAGAAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR TCA 72 bp | GCTTCTTCCTCACACCTCCGTCTCATGTCTGTTGGCTaGTCGGCAGGCTGGAGTCCCTGGTCTGGTGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: ASSSHLRLMSVG*SAGWSPWSGAS Trigger: GCTTGCACCAGACCAGGGACTCCAGCCTGCCGATCAGCCAACAGACATGAGACGGAGGTGTGAGGAAGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR CCA 72 bp | AGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTaGGTACCAGAATCCTGTGCTCAGTCTCTGTTCGTG | + |
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Preference number: 3 (lower is better) Translates to: RTRTPQTMAVCS*VPESCAQSLFV Trigger: CACGAACAGAGACTGAGCACAGGATTCTGGTACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR-3UTR CAA 90 bp | TCTACACAGGGCTGTCCGGAAGCAGAGTTGGCTTGCCGGACGATTTCCTGGGCTGTCCAAAGGCAGAGATaGGCATTGTCTCATGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: STQGCPEAELACRTISWAVQRQR*ALSHEA Trigger: AGCCTCATGAGACAATGCCAATCTCTGCCTTTGGAC...AGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR GCA 72 bp | TTTTCTACACAGGGCTGTCCGGAAGCAGAGTTGGCTTaGCGGACGATTTCCTGGGCTTCTTCCTCACACCTC | + |
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Preference number: 3 (lower is better) Translates to: FSTQGCPEAELA*RTISWASSSHL Trigger: GAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| 3UTR GCA 72 bp | GACCATGGCTGTGTGCAGCTGGGTACCAGAATCCTGTaGTCAGTCTCTGTTCGTGTTGTTGGCTGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: DHGCVQLGTRIL*SVSVRVVGCKG Trigger: GCCTTTGCAGCCAACAACACGAACAGAGACTGAGCACAGGATTCTGGTACCCAGCTGCACACAGCCATGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | TGTCCGGAAGCAGAGTTGGCTTGCCGGACGATTTCCTaGGCTTCTTCCTCACACCTCCGTCTCATGTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CPEAELACRTIS*ASSSHLRLMSV Trigger: AACAGACATGAGACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | TTTCGTTTTCTACACAGGGCTGTCCGGAAGCAGAGTTaGCTTGCCGGACGATTTCCTGGGCTTCTTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: FRFLHRAVRKQS*LAGRFPGLLPH Trigger: GTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGAAAACGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR GCA 72 bp | GTCCTTGTTCAGCTGCTCAAGCTCCAGGACGATCGTTaGGTATCTCCGCTGAAACTCAATGCCAATGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VLVQLLKLQDDR*VSPLKLNANGH Trigger: ATGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGCTTGAGCAGCTGAACAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR GCA 72 bp | TGGACCGGTGACTCTCGGATGGGATTCCCACCATCATaGATGGAAAGACCGTGCTTCTTCATGTTCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: WTGDSRMGFPPS*MERPCFFMFSV Trigger: GACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAGTCACCGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | CCGGTGACTCTCGGATGGGATTCCCACCATCATGCATaGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PVTLGWDSHHHA*KDRASSCSLSV Trigger: GACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAGTCACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAAGGTGACTGCCCCAGTAAAGGATCGCCATCTGTAATTGGTGACTGGAGAGTCCAAAGGCAGAGATaGGCATTGTCTCATGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LQGDCPSKGSPSVIGDWRVQRQR*ALSHEA Trigger: AGCCTCATGAGACAATGCCAATCTCTGCCTTTGGAC...TCTCCAGTCACCAATTACAGATGGCGATCCTTTACTGGGGCAGTCACCTTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193892.6 ENSMUST00000194638.2 |
||
| 3UTR-3UTR CAA 90 bp | AACGTCTCCGTGTCAGAGCCAGAAACTTTACTTCTCCAAGGTGACTGCCCCAGTAGAAGGCCGCTGTTTTaGTCCAAAGGCAGAGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: NVSVSEPETLLLQGDCPSRRPLF*SKGRDW Trigger: CCAATCTCTGCCTTTGGACAAAAACAGCGGCCTTCT...ACTGGGGCAGTCACCTTGGAGAAGTAAAGTTTCTGGCTCTGACACGGAGACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000193892.6 ENSMUST00000194638.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGTGACTGCCCCAGTAAAGGATCGCCATCTGTAATTGGTGACTGGAGAGGAAACCGCGCTGTAACTTaGGTTCCAATAACCAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QGDCPSKGSPSVIGDWRGNRAVT*VPITRG Trigger: ACCCCTGGTTATTGGAACCAAAGTTACAGCGCGGTT...TCCTCTCCAGTCACCAATTACAGATGGCGATCCTTTACTGGGGCAGTCACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194638.2 |
||
| 3UTR GCA 72 bp | CGGATGGGATTCCCACCATCATGCATGGAAAGACCGTaGTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGT | + |
|
Preference number: 3 (lower is better) Translates to: RMGFPPSCMERP*FFMFSVCHRSR Trigger: ACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | GTTTTCCAGCAGCTAGGTTATCTGGTGTTGGAAGCATaGGTTAAGGACCAGGACTCCTCAGACCATGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VFQQLGYLVLEA*VKDQDSSDHGC Trigger: ACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACACCAGATAACCTAGCTGCTGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| 3UTR TCA 72 bp | CCAGCGGGTTCCTTACGACTCGGACTCTCACACTCATaGCGTCTATTTTGCAGCCCAAGATATAATGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PAGSLRLGLSHS*RLFCSPRYNAN Trigger: GTTGGCATTATATCTTGGGCTGCAAAATAGACGTCATGAGTGTGAGAGTCCGAGTCGTAAGGAACCCGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| 3UTR GCA 72 bp | ACTTTATGCAGAACTTTGTTCAGGTCCTTGTTCAGCTaGTCAAGCTCCAGGACGATCGTTGCGTATCTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: TLCRTLFRSLFS*SSSRTIVAYLR Trigger: GCGGAGATACGCAACGATCGTCCTGGAGCTTGAGCAGCTGAACAAGGACCTGAACAAAGTTCTGCATAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR TCA 72 bp | GTGTTGTTGGCTGCAAAGGCGTGTAAGTTTCCCATCTaGCTCAGGCCACTCTGGATATGTGCAACATGGATT | + |
|
Preference number: 3 (lower is better) Translates to: VLLAAKACKFPI*LRPLWICATWI Trigger: AATCCATGTTGCACATATCCAGAGTGGCCTGAGTCAGATGGGAAACTTACACGCCTTTGCAGCCAACAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR GCA 72 bp | CCAGGACGATCGTTGCGTATCTCCGCTGAAACTCAATaGCAATGGGCATGGAATAGGATTTCAGCTTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGRSLRISAETQ*QWAWNRISAFL Trigger: CAGAAAAGCTGAAATCCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAACGATCGTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | TACCAGAATCCTGTGCTCAGTCTCTGTTCGTGTTGTTaGCTGCAAAGGCGTGTAAGTTTCCCATCTGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: YQNPVLSLCSCC*LQRRVSFPSDS Trigger: TGAGTCAGATGGGAAACTTACACGCCTTTGCAGCCAACAACACGAACAGAGACTGAGCACAGGATTCTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | CCGAGAAGGCCGCTGTTTTTGTCCAAAGGCAGAGATTaGCATTGTCTCATGAGGCTCATTACTAAGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRRPLFLSKGRD*HCLMRLITKNF Trigger: GAAGTTCTTAGTAATGAGCCTCATGAGACAATGCCAATCTCTGCCTTTGGACAAAAACAGCGGCCTTCTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194638.2 |
||
| 3UTR GCA 72 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATaGATAAAACAGTGGTTTATCCTCCATGGGATAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RSRLHVLSRIHA*IKQWFILHGIV Trigger: TACTATCCCATGGAGGATAAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | TTGCGTATCTCCGCTGAAACTCAATGCCAATGGGCATaGAATAGGATTTCAGCTTTTCTGCTTCTGTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRISAETQCQWA*NRISAFLLLCS Trigger: TGAACACAGAAGCAGAAAAGCTGAAATCCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | CATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTaGTTTATCCTCCATGGGATAGTACGTTCAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HVLSRIHACIKQ*FILHGIVRSES Trigger: ACTCTCTGAACGTACTATCCCATGGAGGATAAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| 3UTR CCA 72 bp | TTTTTAATCATGAGAATTTTTGATAACTTAGTCACCTaGATAAGGAATTCCACTGGAAAGCCTCCTAACGTC | + |
|
Preference number: 3 (lower is better) Translates to: FLIMRIFDNLVT*IRNSTGKPPNV Trigger: GACGTTAGGAGGCTTTCCAGTGGAATTCCTTATCCAGGTGACTAAGTTATCAAAAATTCTCATGATTAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| 3UTR CAA 72 bp | CCTGGGCTTCTTCCTCACACCTCCGTCTCATGTCTGTaGGCTGATCGGCAGGCTGGAGTCCCTGGTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLLPHTSVSCL*ADRQAGVPGLV Trigger: CACCAGACCAGGGACTCCAGCCTGCCGATCAGCCAACAGACATGAGACGGAGGTGTGAGGAAGAAGCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTACGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVRAPPS*TSRAAF Trigger: AAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCG...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGAAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCCGTCTCATGTCTGTTaGCTGATCGGCAGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLEAWVKDQDSSDHGCVQPSHVC*LIGRLE Trigger: CTCCAGCCTGCCGATCAGCCAACAGACATGAGACGG...CTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR GCA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTAGAAGCAGAGTTGGCTTaGCGGACGATTTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVEAELA*RTISWA Trigger: AGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTC...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| 3UTR CAA 72 bp | GTTTTCTACACAGGGCTGTCCGGAAGCAGAGTTGGCTaGCCGGACGATTTCCTGGGCTTCTTCCTCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: VFYTGLSGSRVG*PDDFLGFFLTP Trigger: AGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | GGAGATGTACAGTTCTCCGGTTTTCCAGCAGCTAGGTTATCTGGTGTTGGAAGCCTCATGTCTGTTGGCTaGTCGGCAGGCTGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GDVQFSGFPAARLSGVGSLMSVG*SAGWSP Trigger: GGGACTCCAGCCTGCCGATCAGCCAACAGACATGAG...GCTTCCAACACCAGATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR GCA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTAAGGTCCTTGTTCAGCTaGTCAAGCTCCAGGACGATC | + |
|
Preference number: 4 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVRSLFS*SSSRTI Trigger: GATCGTCCTGGAGCTTGAGCAGCTGAACAAGGACCT...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGCCGTCTCATGTCTGTTaGCTGATCGGCAGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLHVLCLSQESSACAEQPSHVC*LIGRLE Trigger: CTCCAGCCTGCCGATCAGCCAACAGACATGAGACGG...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| 3UTR CAA 72 bp | GGTCCTTGTTCAGCTGCTCAAGCTCCAGGACGATCGTaGCGTATCTCCGCTGAAACTCAATGCCAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPCSAAQAPGRS*RISAETQCQWA Trigger: TGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGCTTGAGCAGCTGAACAAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | CAGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTCGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QESSACAEQNSCMHKTVVRAPPS*TSRAAF Trigger: AAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCG...AACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | GGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCTCATGTCTGTTGGCTaGTCGGCAGGCTGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFPPSCMERPCFFMFSVCLMSVG*SAGWSP Trigger: GGGACTCCAGCCTGCCGATCAGCCAACAGACATGAG...ACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | CTCTCGGATGGGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTCGTCAGGCAACTaGTCGAGCTCCGCCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSDGIPTIMHGKTVLLHVLSSGN*SSSAIL Trigger: CAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAG...AACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| 3UTR CAA 72 bp | TTTTCGTTTTCTACACAGGGCTGTCCGGAAGCAGAGTaGGCTTGCCGGACGATTTCCTGGGCTTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFSTQGCPEAE*ACRTISWASSS Trigger: TGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTCCGGACAGCCCTGTGTAGAAAACGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTAGTGCTTTGGGAAGCTTaGGTAGGTTCCGTAATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVVLWEA*VGSVIE Trigger: TTCGATTACGGAACCTACTCAAGCTTCCCAAAGCAC...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | GTTGGCTTGCCGGACGATTTCCTGGGCTTCTTCCTCACACCTCCGTCTCATGTCCATCGGGGAGATCTTTaGACTGTGAAACATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGLPDDFLGFFLTPPSHVHRGDL*TVKHLQ Trigger: TTGCAGATGTTTCACAGTTCAAAGATCTCCCCGATG...GACATGAGACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| CDS-3UTR GCA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTATCCGCTGAAACTCAATaGCAATGGGCATGGAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVSAETQ*QWAWNR Trigger: CCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGA...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR GCA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGAGGTCCTTGTTCAGCTaGTCAAGCTCCAGGACGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLLHVLCLSQESSACAEQRSLFS*SSSRTI Trigger: GATCGTCCTGGAGCTTGAGCAGCTGAACAAGGACCT...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR GCA 90 bp | CTCTCGGATGGGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTGAAGCAGAGTTGGCTTaGCGGACGATTTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSDGIPTIMHGKTVLLHVEAELA*RTISWA Trigger: AGCCCAGGAAATCGTCCGGCAAGCCAACTCTGCTTC...AACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTATCCAAAGGCAGAGATTaGCATTGTCTCATGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVSKGRD*HCLMRL Trigger: GAGCCTCATGAGACAATGCCAATCTCTGCCTTTGGA...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGAAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTCTGTTCGTGTTGTTaGCTGCAAAGGCGTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLEAWVKDQDSSDHGCVQLCSCC*LQRRVS Trigger: ACTTACACGCCTTTGCAGCCAACAACACGAACAGAG...CTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | GTGTTGGAAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGTTCCCATCAGTCTCCTaGTTTTTCCCCATTCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: VLEAWVKDQDSSDHGCVQFPSVS*FFPILL Trigger: GAGTAGAATGGGGAAAAATCAGGAGACTGATGGGAA...CTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | TGTTGGAAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCCATCGGGGAGATCTTTaGACTGTGAAACATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CWKHGLRTRTPQTMAVCSHRGDL*TVKHLQ Trigger: TTGCAGATGTTTCACAGTTCAAAGATCTCCCCGATG...GCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR GCA 90 bp | AAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTCTTCTCCAAGGTGACTaGCCCAGTAAAGGATCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTVLLHVLCLSQESSACALLQGD*PSKGSP Trigger: TGGCGATCCTTTACTGGGGCAGTCACCTTGGAGAAG...AGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | GATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCTGCCGGACGATTTCCTaGGCTTCTTCCTCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSHHHAWKDRASSCSLSVCRTIS*ASSSHL Trigger: GAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCA...GACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGGTGCTTTGGGAAGCTTaGGTAGGTTCCGTAATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLHVLCLSQESSACAEQVLWEA*VGSVIE Trigger: TTCGATTACGGAACCTACTCAAGCTTCCCAAAGCAC...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR GCA 90 bp | GGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCTTCTCCAAGGTGACTaGCCCAGTAAAGGATCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFPPSCMERPCFFMFSVCLLQGD*PSKGSP Trigger: TGGCGATCCTTTACTGGGGCAGTCACCTTGGAGAAG...ACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR GCA 90 bp | AAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCGAGTCCCTGGTCTGGTaGAAGCTCATAGCAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: KDRASSCSLSVTGVVCMCESLVW*KLIAIL Trigger: CAGTATTGCTATGAGCTTGCACCAGACCAGGGACTC...GCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | AAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCGTGCTTTGGGAAGCTTaGGTAGGTTCCGTAATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KDRASSCSLSVTGVVCMCVLWEA*VGSVIE Trigger: TTCGATTACGGAACCTACTCAAGCTTCCCAAAGCAC...GCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGCATCGGGGAGATCTTTaGACTGTGAAACATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLHVLCLSQESSACAEQHRGDL*TVKHLQ Trigger: TTGCAGATGTTTCACAGTTCAAAGATCTCCCCGATG...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS-3UTR TCA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTAATTGGCATTGTCTCATaGGGCTCATTACTAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVIGIVS*GSLLRT Trigger: AGTTCTTAGTAATGAGCCTCATGAGACAATGCCAAT...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | CACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGCCATCTGTAATTGGTaGCTGGAGAGGAGGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: HHHAWKDRASSCSLSVTGAICNW*LERRGI Trigger: TATACCCCTCCTCTCCAGTCACCAATTACAGATGGC...TCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
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| CDS-3UTR GCA 90 bp | TGTTGGAAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCAGAACCACTCATATATaGACCACTTATGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CWKHGLRTRTPQTMAVCSRTTHI*TTYVLW Trigger: CCAAAGCACATAAGTGGTGCATATATGAGTGGTTCT...GCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CCA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTAGAAACTCAATGCCAATaGGCATGGAATAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVETQCQ*AWNRIS Trigger: TGAAATCCTATTCCATGCCCATTGGCATTGAGTTTC...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | GTGTTGGAAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGGAAACTCAATGCCAATaGGCATGGAATAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLEAWVKDQDSSDHGCVQETQCQ*AWNRIS Trigger: TGAAATCCTATTCCATGCCCATTGGCATTGAGTTTC...CTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | GGAGATGTACAGTTCTCCGGTTTTCCAGCAGCTAGGTTATCTGGTGTTGGAAGCTTCCCATCAGTCTCCTaGTTTTTCCCCATTCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GDVQFSGFPAARLSGVGSFPSVS*FFPILL Trigger: GAGTAGAATGGGGAAAAATCAGGAGACTGATGGGAA...GCTTCCAACACCAGATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS-3UTR TCA 90 bp | GTCTCCGTGTCAGAGCCAGAAACTTTACTTCTCCAAGGTGACTGCCCCAGTAAATTCCCATCAGTCTCCTaGTTTTTCCCCATTCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVSEPETLLLQGDCPSKFPSVS*FFPILL Trigger: GAGTAGAATGGGGAAAAATCAGGAGACTGATGGGAA...TTTACTGGGGCAGTCACCTTGGAGAAGTAAAGTTTCTGGCTCTGACACGGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000193892.6 ENSMUST00000194638.2 |
||
| CDS-3UTR TCA 90 bp | GATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCTGTAAGTTTCCCATCTaGCTCAGGCCACTCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: DSHHHAWKDRASSCSLSVCKFPI*LRPLWI Trigger: TATCCAGAGTGGCCTGAGTCAGATGGGAAACTTACA...GACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
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| CDS-3UTR GCA 90 bp | GGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTTCCGCTGAAACTCAATaGCAATGGGCATGGAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFPPSCMERPCFFMFSVCSAETQ*QWAWNR Trigger: CCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGA...ACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | GATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCTCCAAAGGCAGAGATTaGCATTGTCTCATGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSHHHAWKDRASSCSLSVSKGRD*HCLMRL Trigger: GAGCCTCATGAGACAATGCCAATCTCTGCCTTTGGA...GACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
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| CDS-3UTR TCA 90 bp | ATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTTTCCCATCAGTCTCCTaGTTTTTCCCCATTCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: MHGKTVLLHVLCLSQESSFPSVS*FFPILL Trigger: GAGTAGAATGGGGAAAAATCAGGAGACTGATGGGAA...AGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | AACGTCTCCGTGTCAGAGCCAGAAACTTTACTTCTCCAAGGTGACTGCCCCAGTGAGATCTTTGAACTGTaGAACATCTGCAACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NVSVSEPETLLLQGDCPSEIFEL*NICNFP Trigger: AGGAAAGTTGCAGATGTTTCACAGTTCAAAGATCTC...ACTGGGGCAGTCACCTTGGAGAAGTAAAGTTTCTGGCTCTGACACGGAGACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193892.6 ENSMUST00000194638.2 |
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| CDS-3UTR CCA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGGATAACTTAGTCACCTaGATAAGGAATTCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLHVLCLSQESSACAEQDNLVT*IRNSTG Trigger: TCCAGTGGAATTCCTTATCCAGGTGACTAAGTTATC...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | GTATCTGGAGATGTACAGTTCTCCGGTTTTCCAGCAGCTAGGTTATCTGGTGTTCTCTGTTCGTGTTGTTaGCTGCAAAGGCGTGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGDVQFSGFPAARLSGVLCSCC*LQRRVS Trigger: ACTTACACGCCTTTGCAGCCAACAACACGAACAGAG...AACACCAGATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTCCAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
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| CDS-3UTR TCA 90 bp | ACTAAGAACTTCATAGTCAGGAATGGTGTGAGTCCCAAGGCCTGTCCTATCGAACATCGGGGAGATCTTTaGACTGTGAAACATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKNFIVRNGVSPKACPIEHRGDL*TVKHLQ Trigger: TTGCAGATGTTTCACAGTTCAAAGATCTCCCCGATG...TTCGATAGGACAGGCCTTGGGACTCACACCATTCCTGACTATGAAGTTCTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194638.2 |
||
| CDS-3UTR TCA 90 bp | GGAGATGTACAGTTCTCCGGTTTTCCAGCAGCTAGGTTATCTGGTGTTGGAAGCATTGGCATTGTCTCATaGGGCTCATTACTAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GDVQFSGFPAARLSGVGSIGIVS*GSLLRT Trigger: AGTTCTTAGTAATGAGCCTCATGAGACAATGCCAAT...GCTTCCAACACCAGATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
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| CDS-3UTR GCA 90 bp | TTTGTTCAGGTCCTTGTTCAGCTGCTCAAGCTCCAGGACGATCGTTGCGTATCTTTTCTGTGGGATCATTaGCACTCTCTGGTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FVQVLVQLLKLQDDRCVSFLWDH*HSLVSF Trigger: AAAAGAAACCAGAGAGTGGCAATGATCCCACAGAAA...AGATACGCAACGATCGTCCTGGAGCTTGAGCAGCTGAACAAGGACCTGAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| CDS-3UTR GCA 90 bp | GGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTAACAGCCTGATTTTCTaGCGCTTCTGTTTTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFPPSCMERPCFFMFSVCNSLIF*RFCFKA Trigger: AGCCTTAAAACAGAAGCGGCAGAAAATCAGGCTGTT...ACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS-3UTR GCA 90 bp | GTCAGGAATGGTGTGAGTCCCAAGGCCTGTCCTATCGAAAGTTACTCTGTAAGTAACAGCCTGATTTTCTaGCGCTTCTGTTTTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRNGVSPKACPIESYSVSNSLIF*RFCFKA Trigger: AGCCTTAAAACAGAAGCGGCAGAAAATCAGGCTGTT...ACTTACAGAGTAACTTTCGATAGGACAGGCCTTGGGACTCACACCATTCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194638.2 |
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| CDS-3UTR CCA 90 bp | GGAGATGTACAGTTCTCCGGTTTTCCAGCAGCTAGGTTATCTGGTGTTGGAAGCGATAACTTAGTCACCTaGATAAGGAATTCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDVQFSGFPAARLSGVGSDNLVT*IRNSTG Trigger: TCCAGTGGAATTCCTTATCCAGGTGACTAAGTTATC...GCTTCCAACACCAGATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
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| CDS-3UTR CCA 90 bp | AAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCCAATGCCAATGGGCATaGAATAGGATTTCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDRASSCSLSVTGVVCMCQCQWA*NRISAF Trigger: AAAAGCTGAAATCCTATTCCATGCCCATTGGCATTG...GCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
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| CDS-3UTR TCA 90 bp | AAGCCTCCTAACGTCTCCGTGTCAGAGCCAGAAACTTTACTTCTCCAAGGTGACGAGTCGACTTCTTTTTaGATTTCTGAAAGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPPNVSVSEPETLLLQGDESTSF*ISERHF Trigger: GAAATGCCTTTCAGAAATTCAAAAAGAAGTCGACTC...GTCACCTTGGAGAAGTAAAGTTTCTGGCTCTGACACGGAGACGTTAGGAGGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
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| CDS-3UTR TCA 90 bp | CTCTCGGATGGGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTTGGCTTGTCTATGTTTaGGTAGAACCACTCATATAT | + |
|
Preference number: 4 (lower is better) Translates to: LSDGIPTIMHGKTVLLHVWLVYV*VEPLIY Trigger: ATATATGAGTGGTTCTACTCAAACATAGACAAGCCA...AACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS-3UTR TCA 90 bp | CACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGAGATCTTTGAACTGTaGAACATCTGCAACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHHAWKDRASSCSLSVTGEIFEL*NICNFP Trigger: AGGAAAGTTGCAGATGTTTCACAGTTCAAAGATCTC...TCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS-3UTR TCA 90 bp | TTACTTCTCCAAGGTGACTGCCCCAGTAAAGGATCGCCATCTGTAATTGGTGACGAGATCTTTGAACTGTaGAACATCTGCAACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQGDCPSKGSPSVIGDEIFEL*NICNFP Trigger: AGGAAAGTTGCAGATGTTTCACAGTTCAAAGATCTC...GTCACCAATTACAGATGGCGATCCTTTACTGGGGCAGTCACCTTGGAGAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000193892.6 ENSMUST00000194638.2 |
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| CDS-3UTR GCA 90 bp | ATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTTTTCTGTGGGATCATTaGCACTCTCTGGTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MHGKTVLLHVLCLSQESSFLWDH*HSLVSF Trigger: AAAAGAAACCAGAGAGTGGCAATGATCCCACAGAAA...AGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
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| CDS-3UTR GCA 90 bp | GATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCAGAACCACTCATATATaGACCACTTATGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSHHHAWKDRASSCSLSVRTTHI*TTYVLW Trigger: CCAAAGCACATAAGTGGTGCATATATGAGTGGTTCT...GACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS-3UTR GCA 90 bp | GGAGTCCCTGGTCTGGTGCAAGCTCATAGCAATACTGCTGAACTTTATGCAGAAAGAACCACTCATATATaGACCACTTATGTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVPGLVQAHSNTAELYAERTTHI*TTYVLW Trigger: CCAAAGCACATAAGTGGTGCATATATGAGTGGTTCT...TTCTGCATAAAGTTCAGCAGTATTGCTATGAGCTTGCACCAGACCAGGGACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| CDS-3UTR GCA 90 bp | CAGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTAACAGCCTGATTTTCTaGCGCTTCTGTTTTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QESSACAEQNSCMHKTVVNSLIF*RFCFKA Trigger: AGCCTTAAAACAGAAGCGGCAGAAAATCAGGCTGTT...AACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS-3UTR GCA 90 bp | CAGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTGCCACTCTGGATATGTaGAACATGGATTTCTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: QESSACAEQNSCMHKTVVATLDM*NMDFYV Trigger: AACGTAGAAATCCATGTTGCACATATCCAGAGTGGC...AACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR GCA 90 bp | GTATCTGGAGATGTACAGTTCTCCGGTTTTCCAGCAGCTAGGTTATCTGGTGTTGCCACTCTGGATATGTaGAACATGGATTTCTACGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGDVQFSGFPAARLSGVATLDM*NMDFYV Trigger: AACGTAGAAATCCATGTTGCACATATCCAGAGTGGC...AACACCAGATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTCCAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTGCTGTAAATTTCTGTaGGATCATTGCCACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QESSACAEQNSCMHKTVVCCKFL*DHCHSL Trigger: CAGAGAGTGGCAATGATCCCACAGAAATTTACAGCA...AACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCCGGCTCCTTCATTTCCTCTGCTGATAAACAACAAAGCTTTTATAAATTATGCCGGACGATTTCCTaGGCTTCTTCCTCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGSFISSADKQQSFYKLCRTIS*ASSSHL Trigger: GAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCA...TAATTTATAAAAGCTTTGTTGTTTATCAGCAGAGGAAATGAAGGAGCCGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | GGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTGAGTCGACTTCTTTTTaGATTTCTGAAAGGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFPPSCMERPCFFMFSVCESTSF*ISERHF Trigger: GAAATGCCTTTCAGAAATTCAAAAAGAAGTCGACTC...ACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | CACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGATGGCTTGTCTATGTTTaGGTAGAACCACTCATATAT | + |
|
Preference number: 4 (lower is better) Translates to: HHHAWKDRASSCSLSVTGWLVYV*VEPLIY Trigger: ATATATGAGTGGTTCTACTCAAACATAGACAAGCCA...TCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | ATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTTGGCTTGTCTATGTTTaGGTAGAACCACTCATATAT | + |
|
Preference number: 4 (lower is better) Translates to: MHGKTVLLHVLCLSQESSWLVYV*VEPLIY Trigger: ATATATGAGTGGTTCTACTCAAACATAGACAAGCCA...AGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTTGCTGTAAATTTCTGTaGGATCATTGCCACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRLHVLSRIHACIKQWFCCKFL*DHCHSL Trigger: CAGAGAGTGGCAATGATCCCACAGAAATTTACAGCA...AAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCCGGCTCCTTCATTTCCTCTGCTGATAAACAACAAAGCTTTTATAAATTAGCCATCTGTAATTGGTaGCTGGAGAGGAGGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: SSGSFISSADKQQSFYKLAICNW*LERRGI Trigger: TATACCCCTCCTCTCCAGTCACCAATTACAGATGGC...TAATTTATAAAAGCTTTGTTGTTTATCAGCAGAGGAAATGAAGGAGCCGGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCGGCTCCTTCATTTCCTCTGCTGATAAACAACAAAGCTTTTATAAATTAGAGTCCCTGGTCTGGTaGAAGCTCATAGCAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGSFISSADKQQSFYKLESLVW*KLIAIL Trigger: CAGTATTGCTATGAGCTTGCACCAGACCAGGGACTC...TAATTTATAAAAGCTTTGTTGTTTATCAGCAGAGGAAATGAAGGAGCCGGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTCAATGCCAATGGGCATaGAATAGGATTTCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSRLHVLSRIHACIKQWFQCQWA*NRISAF Trigger: AAAAGCTGAAATCCTATTCCATGCCCATTGGCATTG...AAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCCGGCTCCTTCATTTCCTCTGCTGATAAACAACAAAGCTTTTATAAATTATGTAAGTTTCCCATCTaGCTCAGGCCACTCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSGSFISSADKQQSFYKLCKFPI*LRPLWI Trigger: TATCCAGAGTGGCCTGAGTCAGATGGGAAACTTACA...TAATTTATAAAAGCTTTGTTGTTTATCAGCAGAGGAAATGAAGGAGCCGGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR TCA 90 bp | CTCCATGGGATAGTACGTTCAGAGAGTTTCCGGTTAAAAATGTTTGCTGATAAAAAAACCAATCTTCTGTaGTGCTTTCTTATCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHGIVRSESFRLKMFADKKTNLL*CFLIWC Trigger: ACACCAGATAAGAAAGCATCACAGAAGATTGGTTTT...TTTATCAGCAAACATTTTTAACCGGAAACTCTCTGAACGTACTATCCCATGGAG 38% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS TCA 90 bp | TTGCTGAAGAGCTCTCGTCAGGCAACTGGTCGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCGCCCCGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLKSSRQATGRAPPS*TSRAAFSKAARPGA Trigger: TGCACCGGGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192561.6 |
||
| CDS-3UTR CAA 90 bp | CACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGATCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HHHAWKDRASSCSLSVTGSSSAI*NEPRRF Trigger: AAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGA...TCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGGCTCCAGGACGATCGTaGCGTATCTCCGCTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: VLLHVLCLSQESSACAEQAPGRS*RISAET Trigger: AGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGC...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTTCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSRLHVLSRIHACIKQWFSSSAI*NEPRRF Trigger: AAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGA...AAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | AAGCATGGGTTAAGGACCAGGACTCCTCAGACCATGGCTGTGTGCAGCTGGGTAAGGCAGAGATTGGCATaGTCTCATGAGGCTCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: KHGLRTRTPQTMAVCSWVRQRLA*SHEAHY Trigger: GTAATGAGCCTCATGAGACAATGCCAATCTCTGCCT...TACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGACTTTGTTCAGGTCCTaGTTCAGCTGCTCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLLHVLCLSQESSACAEQTLFRS*FSCSSS Trigger: GGAGCTTGAGCAGCTGAACAAGGACCTGAACAAAGT...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | AAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCCAGTCTCTGTTCGTGTaGTTGGCTGCAAAGGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KDRASSCSLSVTGVVCMCQSLFV*LAAKAC Trigger: ACACGCCTTTGCAGCCAACAACACGAACAGAGACTG...GCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCAGAAACTTTACTTCTCCAAGGTGACTGCCCCAGTAAAGGATCGCCATAACCGCGCTGTAACTTaGGTTCCAATAACCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QSQKLYFSKVTAPVKDRHNRAVT*VPITRG Trigger: ACCCCTGGTTATTGGAACCAAAGTTACAGCGCGGTT...ATGGCGATCCTTTACTGGGGCAGTCACCTTGGAGAAGTAAAGTTTCTGGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | CTCTCGGATGGGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTACTTTGTTCAGGTCCTaGTTCAGCTGCTCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSDGIPTIMHGKTVLLHVTLFRS*FSCSSS Trigger: GGAGCTTGAGCAGCTGAACAAGGACCTGAACAAAGT...AACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGTCATCGGGGAGATCTTaGAACTGTGAAACATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLLHVLCLSQESSACAEQSSGRS*NCETSA Trigger: TGCAGATGTTTCACAGTTCAAAGATCTCCCCGATGA...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | GATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCAACCGCGCTGTAACTTaGGTTCCAATAACCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DSHHHAWKDRASSCSLSVNRAVT*VPITRG Trigger: ACCCCTGGTTATTGGAACCAAAGTTACAGCGCGGTT...GACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | CACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAAGAAGGCCGCTGTTTTaGTCCAAAGGCAGAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: HHHAWKDRASSCSLSVTGRRPLF*SKGRDW Trigger: CCAATCTCTGCCTTTGGACAAAAACAGCGGCCTTCT...TCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | GAGTGTATTAAAAAGCCGTATCTGGAGATGTACAGTTCTCCGGTTTTCCAGCAGGCTCCAGGACGATCGTaGCGTATCTCCGCTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ECIKKPYLEMYSSPVFQQAPGRS*RISAET Trigger: AGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGC...CTGCTGGAAAACCGGAGAACTGTACATCTCCAGATACGGCTTTTTAATACACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | GGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTTCTCTGTTCGTGTTGTaGGCTGCAAAGGCGTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GFPPSCMERPCFFMFSVCSLFVL*AAKACK Trigger: CTTACACGCCTTTGCAGCCAACAACACGAACAGAGA...ACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | GAGTGTATTAAAAAGCCGTATCTGGAGATGTACAGTTCTCCGGTTTTCCAGCAGCAGTCTCTGTTCGTGTaGTTGGCTGCAAAGGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ECIKKPYLEMYSSPVFQQQSLFV*LAAKAC Trigger: ACACGCCTTTGCAGCCAACAACACGAACAGAGACTG...CTGCTGGAAAACCGGAGAACTGTACATCTCCAGATACGGCTTTTTAATACACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | CTCTCGGATGGGATTCCCACCATCATGCATGGAAAGACCGTGCTTCTTCATGTTATTTCTGTGGGATCATaGCCACTCTCTGGTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSDGIPTIMHGKTVLLHVISVGS*PLSGFF Trigger: AAAGAAACCAGAGAGTGGCAATGATCCCACAGAAAT...AACATGAAGAAGCACGGTCTTTCCATGCATGATGGTGGGAATCCCATCCGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | GTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTGCATGTGCTGAGCAGGTGGCTTGTCTATGTTaGAGTAGAACCACTCATATA | + |
|
Preference number: 5 (lower is better) Translates to: VLLHVLCLSQESSACAEQVACLC*SRTTHI Trigger: TATATGAGTGGTTCTACTCAAACATAGACAAGCCAC...CTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | ATGCATGGAAAGACCGTGCTTCTTCATGTTCTCTGTCTGTCACAGGAGTCGTCTTCATCGGGGAGATCTTaGAACTGTGAAACATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MHGKTVLLHVLCLSQESSSSGRS*NCETSA Trigger: TGCAGATGTTTCACAGTTCAAAGATCTCCCCGATGA...AGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCTTTCCATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTAACCGCGCTGTAACTTaGGTTCCAATAACCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSRLHVLSRIHACIKQWFNRAVT*VPITRG Trigger: ACCCCTGGTTATTGGAACCAAAGTTACAGCGCGGTT...AAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTAGAAGGCCGCTGTTTTaGTCCAAAGGCAGAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRLHVLSRIHACIKQWFRRPLF*SKGRDW Trigger: CCAATCTCTGCCTTTGGACAAAAACAGCGGCCTTCT...AAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTTTCTCTGTTCGTGTTGTaGGCTGCAAAGGCGTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSRLHVLSRIHACIKQWFSLFVL*AAKACK Trigger: CTTACACGCCTTTGCAGCCAACAACACGAACAGAGA...AAACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
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| CDS-3UTR CAA 90 bp | GAGTGTATTAAAAAGCCGTATCTGGAGATGTACAGTTCTCCGGTTTTCCAGCAGCACCACTTATGTGCTTaGGGAAGCTTGAGTAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ECIKKPYLEMYSSPVFQQHHLCA*GSLSRF Trigger: GAACCTACTCAAGCTTCCCAAAGCACATAAGTGGTG...CTGCTGGAAAACCGGAGAACTGTACATCTCCAGATACGGCTTTTTAATACACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | AGGCTCATTACTAAGAACTTCATAGTCAGGAATGGTGTGAGTCCCAAGGCCTGTTCATCGGGGAGATCTTaGAACTGTGAAACATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLITKNFIVRNGVSPKACSSGRS*NCETSA Trigger: TGCAGATGTTTCACAGTTCAAAGATCTCCCCGATGA...ACAGGCCTTGGGACTCACACCATTCCTGACTATGAAGTTCTTAGTAATGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194638.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTCGTCTGCATGTGCTGAGCAGAATTCATGCATGCATAAAACAGTGGTTATTTCTGTGGGATCATaGCCACTCTCTGGTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QESSACAEQNSCMHKTVVISVGS*PLSGFF Trigger: AAAGAAACCAGAGAGTGGCAATGATCCCACAGAAAT...AACCACTGTTTTATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | AAATATAAACTCTGCACTAAGATCTGCAGTGGCCCAATACCAACAAAGAACACAGTCCAAAGGCAGAGATaGGCATTGTCTCATGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KYKLCTKICSGPIPTKNTVQRQR*ALSHEA Trigger: AGCCTCATGAGACAATGCCAATCTCTGCCTTTGGAC...TGTGTTCTTTGTTGGTATTGGGCCACTGCAGATCTTAGTGCAGAGTTTATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | CTCCATGGGATAGTACGTTCAGAGAGTTTCCGGTTAAAAATGTTTGCTGATAAAGTCCAAAGGCAGAGATaGGCATTGTCTCATGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHGIVRSESFRLKMFADKVQRQR*ALSHEA Trigger: AGCCTCATGAGACAATGCCAATCTCTGCCTTTGGAC...TTTATCAGCAAACATTTTTAACCGGAAACTCTCTGAACGTACTATCCCATGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS-3UTR CAA 90 bp | GAGTGTATTAAAAAGCCGTATCTGGAGATGTACAGTTCTCCGGTTTTCCAGCAGGTGGCTTGTCTATGTTaGAGTAGAACCACTCATATA | + |
|
Preference number: 5 (lower is better) Translates to: ECIKKPYLEMYSSPVFQQVACLC*SRTTHI Trigger: TATATGAGTGGTTCTACTCAAACATAGACAAGCCAC...CTGCTGGAAAACCGGAGAACTGTACATCTCCAGATACGGCTTTTTAATACACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS TCA 90 bp | ATTTATTTGTCTGTCATCTTCATCAGAAAAGAGTCGACTTCTTTTTaGATTTCTGAAAGGCATTTCTACAGCAGGGCCCGCATTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IYLSVIFIRKESTSF*ISERHFYSRARIPA Trigger: GGCAGGAATGCGGGCCCTGCTGTAGAAATGCCTTTCAGAAATTCAAAAAGAAGTCGACTCTTTTCTGATGAAGATGACAGACAAATAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | CTCCATGGGATAGTACGTTCAGAGAGTTTCCGGTTAAAAATGTTTGCTGATAAATCATCGGGGAGATCTTaGAACTGTGAAACATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHGIVRSESFRLKMFADKSSGRS*NCETSA Trigger: TGCAGATGTTTCACAGTTCAAAGATCTCCCCGATGA...TTTATCAGCAAACATTTTTAACCGGAAACTCTCTGAACGTACTATCCCATGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCCGGCTCCTTCATTTCCTCTGCTGATAAACAACAAAGCTTTTATAAATTAAGGCAGAGATTGGCATaGTCTCATGAGGCTCATTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSGSFISSADKQQSFYKLRQRLA*SHEAHY Trigger: GTAATGAGCCTCATGAGACAATGCCAATCTCTGCCT...TAATTTATAAAAGCTTTGTTGTTTATCAGCAGAGGAAATGAAGGAGCCGGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS CCA 90 bp | GTTGACATCGTTGCTGTAAATTTCTGTGGGATCATTGCCACTCTCTaGTTTCTTTTAGGTGACTTTGTATTTATTTGTCTGTCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VDIVAVNFCGIIATL*FLLGDFVFICLSSS Trigger: TGAAGATGACAGACAAATAAATACAAAGTCACCTAAAAGAAACCAGAGAGTGGCAATGATCCCACAGAAATTTACAGCAACGATGTCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
||
| CDS-3UTR CAA 90 bp | ATCATGAGAATTTTTGATAACTTAGTCACCTGGATAAGGAATTCCACTGGAAAGGTGGCTTGTCTATGTTaGAGTAGAACCACTCATATA | + |
|
Preference number: 5 (lower is better) Translates to: IMRIFDNLVTWIRNSTGKVACLC*SRTTHI Trigger: TATATGAGTGGTTCTACTCAAACATAGACAAGCCAC...CTTTCCAGTGGAATTCCTTATCCAGGTGACTAAGTTATCAAAAATTCTCATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193892.6 |
||
| CDS CAA 90 bp | TTTGCTGAAGAGCTCTCGTCAGGCAACTGGTCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCGCCCCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FAEELSSGNWSSSAI*NEPRRFFKGCPPRC Trigger: GCACCGGGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192561.6 |
||
| CDS TCA 72 bp | AGCTCTCGTCAGGCAACTGGTCGAGCTCCGCCATCTTaGACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRQATGRAPPS*TSRAAFSKAAR Trigger: GCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192561.6 |
||
| CDS CAA 72 bp | GAGCTCTCGTCAGGCAACTGGTCGAGCTCCGCCATCTaGAACGAGCCGCGCCGCTTTTTCAAAGGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ELSSGNWSSSAI*NEPRRFFKGCP Trigger: CGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192561.6 |
||
| CDS CCA 72 bp | ACAAGGGCTTTTGCTGAAGAGCTCTCGTCAGGCAACTaGTCGAGCTCCGCCATCTTGAACGAGCCGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TRAFAEELSSGN*SSSAILNEPRR Trigger: GCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 |
||
| CDS GCA 72 bp | TCTGCAACTTTCCTTTGTTGTAACAGCCTGATTTTCTaGCGCTTCTGTTTTAAGGCTGATCTCTCTCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SATFLCCNSLIF*RFCFKADLSPR Trigger: CCTCGGAGAGAGATCAGCCTTAAAACAGAAGCGGCAGAAAATCAGGCTGTTACAACAAAGGAAAGTTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194638.2 |
||
| CDS CAA 90 bp | TTGGTTCCAATAACCAGGGGTAGAGGGATTTCATCGGGGAGATCTTaGAACTGTGAAACATCTGCAACTTTCCTTTGTTGTAACAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVPITRGRGISSGRS*NCETSATFLCCNSL Trigger: CAGGCTGTTACAACAAAGGAAAGTTGCAGATGTTTCACAGTTCAAAGATCTCCCCGATGAAATCCCTCTACCCCTGGTTATTGGAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
||
| CDS TCA 72 bp | CTTCATCAGAAAAGAGTCGACTTCTTTTTGAATTTCTaGAAGGCATTTCTACAGCAGGGCCCGCATTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LHQKRVDFFLNF*KAFLQQGPHSC Trigger: GCAGGAATGCGGGCCCTGCTGTAGAAATGCCTTTCAGAAATTCAAAAAGAAGTCGACTCTTTTCTGATGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
||
| CDS TCA 72 bp | TCTGTCATCTTCATCAGAAAAGAGTCGACTTCTTTTTaGATTTCTGAAAGGCATTTCTACAGCAGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SVIFIRKESTSF*ISERHFYSRAR Trigger: GCGGGCCCTGCTGTAGAAATGCCTTTCAGAAATTCAAAAAGAAGTCGACTCTTTTCTGATGAAGATGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192561.6 ENSMUST00000193892.6 |
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| CDS GCA 72 bp | TCTGCAACTTTCCTTTGTTGTAACAGCCTGATTTTCTaGCGCTTCTGTTTTAAGGCTGATCTCTCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SATFLCCNSLIF*RFCFKADLSSS Trigger: TGAGGAAGAGAGATCAGCCTTAAAACAGAAGCGGCAGAAAATCAGGCTGTTACAACAAAGGAAAGTTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS TCA 72 bp | ACTCATATATGCACCACTTATGTGCTTTGGGAAGCTTaGGTAGGTTCCGTAATCGAAAACCAATCTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: THICTTYVLWEA*VGSVIENQSSV Trigger: CACAGAAGATTGGTTTTCGATTACGGAACCTACTCAAGCTTCCCAAAGCACATAAGTGGTGCATATATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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| CDS CAA 72 bp | CACTCATATATGCACCACTTATGTGCTTTGGGAAGCTaGAGTAGGTTCCGTAATCGAAAACCAATCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: HSYMHHLCALGS*SRFRNRKPIFC Trigger: ACAGAAGATTGGTTTTCGATTACGGAACCTACTCAAGCTTCCCAAAGCACATAAGTGGTGCATATATGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192561.6 ENSMUST00000192725.6 ENSMUST00000193892.6 |
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