Pregenerated sensors for LIMK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020451Ensembl transcript IDs: ENSMUST00000101638.4, ENSMUST00000101640.10, ENSMUST00000101642.10, ENSMUST00000110029.9
Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATaGCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTGGACCAGC | + |
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Preference number: 1 (lower is better) Translates to: GHLAARGRKCPHSCP*PWPSSVAQEASWTS Trigger: GCTGGTCCAGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CCA 90 bp | CTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATaGCCCTCGAGTGTGGCTCAGGAAGCAAGCTGGACCAGCAACAAA | + |
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Preference number: 1 (lower is better) Translates to: LAARGRKCPHSCPCP*PSSVAQEASWTSNK Trigger: TTTGTTGCTGGTCCAGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CCA 90 bp | GTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCACATTGCTGCCTaGCCCAGACATTCTAGAGGATGTGCAGTAGCTGCCACAAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: VWGLSSHQCLSHIAA*PRHSRGCAVAATRV Trigger: CACCCTTGTGGCAGCTACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTGGTGGCTGCTGAGTCCCCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR GCA 90 bp | GTCAAGGACGCTGAACCATGCCCATCGGGAGTTCAGGATTCCCTCTaGAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGC | + |
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Preference number: 1 (lower is better) Translates to: VKDAEPCPSGVQDSL*SKCANSTRKYSLHS Trigger: GCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAGGGAATCCTGAACTCCCGATGGGCATGGTTCAGCGTCCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CCA 90 bp | GTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTaGCTCAGGAAGCAAGCTGGACCAGCAACAAAAAGAGGTAGAATC | + |
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Preference number: 1 (lower is better) Translates to: VESAPIVAHAHGPRV*LRKQAGPATKRGRI Trigger: GATTCTACCTCTTTTTGTTGCTGGTCCAGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR GCA 90 bp | TTGAAGGTTCCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTaGACCTTGCTGAGCCAGACTCCAGAGCCCTCAGGCCAGTTCACT | + |
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Preference number: 1 (lower is better) Translates to: LKVPRFCNSYYRFKS*TLLSQTPEPSGQFT Trigger: AGTGAACTGGCCTGAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGGAACCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR TCA 90 bp | TTTGTTAAACATGGCGTGAGCTCCCGCTTAGATGACAAACCTTGGTaGGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: FVKHGVSSRLDDKPW*ATESLDTWQPGVES Trigger: ACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAAGGTTTGTCATCTAAGCGGGAGCTCACGCCATGTTTAACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR GCA 90 bp | GTTGGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTaGTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGT | + |
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Preference number: 1 (lower is better) Translates to: VGFCRFYHILRLFKT*SKGHGLGWRRNRYC Trigger: ACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CCA 90 bp | ATACTAAGACTCTTTAAAACCTGCTCCAAAGGGCATGGCCTGGGATaGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: ILRLFKTCSKGHGLG*RRNRYCHFTCFEGS Trigger: GGAACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CCA 90 bp | GTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTaGCCAAAGACTTCCCATCCCATAATTCATTTCGTCTATGTACAA | + |
|
Preference number: 1 (lower is better) Translates to: VCKLHTQVQSTQQEK*PKTSHPIIHFVYVQ Trigger: TTGTACATAGACGAAATGAATTATGGGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGAAGTCCTGCACCTTGCTaGGCCAGACTCCAGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: WQPGVESAPIVAHAHGPRSPAPC*ARLQSP Trigger: AGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACT...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACCCCATGCACTGATGTaGTCCCTGGGCTGTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: WQPGVESAPIVAHAHGPRPHALM*SLGCEQ Trigger: CTGCTCACAGCCCAGGGACCACATCAGTGCATGGGG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGTGGTCCCTGGGCTGTaGGCAGAGACCAGTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LDTWQPGVESAPIVAHAHVVPGL*AETSPL Trigger: CAAAGGACTGGTCTCTGCTCACAGCCCAGGGACCAC...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCCCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGACAGCAAGGACAGCGTaGAGAGGGGGCAATGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: QSPQASSLRHLAQQAQIMTARTA*RGGNAG Trigger: GCCAGCATTGCCCCCTCTGCACGCTGTCCTTGCTGT...CATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGGGCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATACAGCAAGGACAGCGTaGAGAGGGGGCAATGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LDTWQPGVESAPIVAHAHTARTA*RGGNAG Trigger: GCCAGCATTGCCCCCTCTGCACGCTGTCCTTGCTGT...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATCAGAGGGGGCAATGCTaGCTGTGGAATGTCCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LDTWQPGVESAPIVAHAHQRGQC*LWNVPL Trigger: CAGGGGGACATTCCACAGCCAGCATTGCCCCCTCTG...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCACCCAAGTGCCTCCTaGGGAGGTAGTAGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: LVSYRVPGHLAARGRKCPHPSAS*GGSRDG Trigger: GCCATCCCTACTACCTCCCCAGGAGGCACTTGGGTG...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTAGGGCAGGGCCTGTTTaGAGCCCCAGTTTCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: APIVAHAHGPRVWLRKQARAGPV*SPSFFG Trigger: ACCAAAGAAACTGGGGCTGCAAACAGGCCCTGCCCT...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACTGCTCCAAAGGGCATaGCCTGGGATGGAGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: WQPGVESAPIVAHAHGPRLLQRA*PGMEEK Trigger: TTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCAACATGCTGAGCTTTTaGCTGAGCCCACCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVSYRVPGHLAARGRKCPNMLSF*LSPPAW Trigger: CCAGGCTGGTGGGCTCAGTCAAAAGCTCAGCATGTT...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACTTAGACCCAAAGTCTaGGGCAAACCAGGCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: WQPGVESAPIVAHAHGPRLRPKV*GKPGWH Trigger: ATGCCAGCCTGGTTTGCCTCAGACTTTGGGTCTAAG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTTACCGCTTCAAGTCCTaGACCTTGCTGAGCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: APIVAHAHGPRVWLRKQAYRFKS*TLLSQT Trigger: AGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTA...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGTTGAGACAGGATGCTaGAGTGGAAACTCCCCATGC | + |
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Preference number: 2 (lower is better) Translates to: LDTWQPGVESAPIVAHAHVETGC*SGNSPC Trigger: GCATGGGGAGTTTCCACTTCAGCATCCTGTCTCAAC...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGTTGATTACAGCAAGGACAGCGTaGAGAGGGGGCAATGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PQASSLRHLAQQAQIMLITARTA*RGGNAG Trigger: GCCAGCATTGCCCCCTCTGCACGCTGTCCTTGCTGT...AATCAACATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCAAACCTAGGCAGTCCTaGTCACAGCAAGGACAGCGT | + |
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Preference number: 2 (lower is better) Translates to: LVSYRVPGHLAARGRKCPKPRQS*SQQGQR Trigger: ACGCTGTCCTTGCTGTGAGCAGGACTGCCTAGGTTT...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCGGACCCCCTTCTCTCTaGTTAGACCCAAAGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LVSYRVPGHLAARGRKCPGPPSL*LDPKSE Trigger: CTCAGACTTTGGGTCTAAGCAGAGAGAAGGGGGTCC...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTAAGTCCTGCACCTTGCTaGGCCAGACTCCAGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVSPAPC*ARLQSP Trigger: AGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACT...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCAGGGTGCAAAGAAATTaGTGGGACCCCCTTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LVSYRVPGHLAARGRKCPRVQRN*WDPLLS Trigger: AGAGAGAAGGGGGTCCCATCAATTTCTTTGCACCCT...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGACAGCAAGGACAGCGTaGAGAGGGGGCAATGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PRFCNSYYRFKSCTLLSQTARTA*RGGNAG Trigger: GCCAGCATTGCCCCCTCTGCACGCTGTCCTTGCTGT...CTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTAGACTCTTTAAAACCTaGTCCAAAGGGCATGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: APIVAHAHGPRVWLRKQARLFKT*SKGHGL Trigger: CAGGCCATGCCCTTTGGAGCAGGTTTTAAAGAGTCT...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTTTTCCTATCTCAGTTTaGGGACTCAGCAGCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: APIVAHAHGPRVWLRKQAFPISV*GLSSHQ Trigger: TTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAA...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CAA 90 bp | GTTCCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTaGCTGAGCCAGACTCCAGAGCCCTCAGGCCAGTTCACTCCGTCA | + |
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Preference number: 2 (lower is better) Translates to: VPRFCNSYYRFKSCT*LSQTPEPSGQFTPS Trigger: TGACGGAGTGAACTGGCCTGAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTAGTCCTGCACCTTGCTaGGCCAGACTCCAGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSSPAPC*ARLQSP Trigger: AGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACT...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCGTGGTCCCTGGGCTGTaGGCAGAGACCAGTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QNPCTVRQHAELLTEPTSVVPGL*AETSPL Trigger: CAAAGGACTGGTCTCTGCTCACAGCCCAGGGACCAC...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGATGGTGTTTTTGTGAGTaGCTGCTTGTTGAGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: WQPGVESAPIVAHAHGPRWCFCE*LLVETG Trigger: TCCTGTCTCAACAAGCAGTCACTCACAAAAACACCA...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATAGACTCTTTAAAACCTaGTCCAAAGGGCATGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LDTWQPGVESAPIVAHAHRLFKT*SKGHGL Trigger: CAGGCCATGCCCTTTGGAGCAGGTTTTAAAGAGTCT...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CAA 90 bp | GCTGGCATCCAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTaGACTGAGCCCACCAGCCTGGATACAGGGCTTTTAGAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AGIQNPCTVRQHAEL*TEPTSLDTGLLEGR Trigger: CCTGCCCTCTAAAAGCCCTGTATCCAGGCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTGGATGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTTTTTGTGAGTGACTaGTTGTTGAGACAGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: WQPGVESAPIVAHAHGPRVFVSD*LLRQDA Trigger: AGCATCCTGTCTCAACAAGCAGTCACTCACAAAAAC...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCAGGGCAGGGCCTGTTTaGAGCCCCAGTTTCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GVLFLSQFGDSAATNACPRAGPV*SPSFFG Trigger: ACCAAAGAAACTGGGGCTGCAAACAGGCCCTGCCCT...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACGAGTAACAGACTCTTaGTCTATAATCCAGGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: WQPGVESAPIVAHAHGPRRVTDS*SIIQAL Trigger: AAGAGCCTGGATTATAGACCAAGAGTCTGTTACTCG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGCCAAAGACTTCCCATCCCCCCATGCACTGATGTaGTCCCTGGGCTGTGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PHASTVYTARKVAKDFPSPHALM*SLGCEQ Trigger: CTGCTCACAGCCCAGGGACCACATCAGTGCATGGGG...GGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTAACATGCTGAGCTTTTaGCTGAGCCCACCAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSNMLSF*LSPPAW Trigger: CCAGGCTGGTGGGCTCAGTCAAAAGCTCAGCATGTT...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTGGGCATGGCCTGGGATaGAGGAGAAATCGCTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSGHGLG*RRNRYC Trigger: ACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCC...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCCCAAAGGGCATGGCCTaGGATGGAGGAGAAATCGCT | + |
|
Preference number: 2 (lower is better) Translates to: QNPCTVRQHAELLTEPTSPKGMA*DGGEIA Trigger: AGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGG...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTTGCCCATGCCCATaGCCCTCGAGTGTGGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LCSKCANSTRKYSLHSKKSCPCP*PSSVAQ Trigger: CTGAGCCACACTCGAGGGCCATGGGCATGGGCAACT...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTACCGCTTCAAGTCCTaGACCTTGCTGAGCCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHYRFKS*TLLSQT Trigger: AGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTA...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATTACTGTCATTTCACATaGTTTGAAGGTTCCCCGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LDTWQPGVESAPIVAHAHYCHFT*FEGSPF Trigger: AAACGGGGAACCTTCAAAGCATGTGAAATGACAGTA...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCTACTGTCATTTCACATaGTTTGAAGGTTCCCCGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LVSYRVPGHLAARGRKCPYCHFT*FEGSPF Trigger: AAACGGGGAACCTTCAAAGCATGTGAAATGACAGTA...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR GCA 90 bp | CCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGCCAAAGACTTCCCATCCAGTGGAAACTCCCCATaGACTGATGTGGTCCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PHASTVYTARKVAKDFPSSGNSP*TDVVPG Trigger: CCCAGGGACCACATCAGTGCATGGGGAGTTTCCACT...GGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAACTCAGCAGCCACCAATaGCTGTCCCACATTGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LCSKCANSTRKYSLHSKKLSSHQ*LSHIAA Trigger: GGCAGCAATGTGGGACAGGCATTGGTGGCTGCTGAG...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTCAGAGGGGGCAATGCTaGCTGTGGAATGTCCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: CSKCANSTRKYSLHSKKSQRGQC*LWNVPL Trigger: CAGGGGGACATTCCACAGCCAGCATTGCCCCCTCTG...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTCAGAGGGGGCAATGCTaGCTGTGGAATGTCCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: MAWDGGEIATVISHALKVQRGQC*LWNVPL Trigger: CAGGGGGACATTCCACAGCCAGCATTGCCCCCTCTG...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CAA 90 bp | CAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGTaGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCAATCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: QASSLRHLAQQAQIM*ISVKLQPPRISIHR Trigger: TCTGTGGATTGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | CCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGCCAAAGACTTCCCATCCCTTAGACCCAAAGTCTaGGGCAAACCAGGCTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: PHASTVYTARKVAKDFPSLRPKV*GKPGWH Trigger: ATGCCAGCCTGGTTTGCCTCAGACTTTGGGTCTAAG...GGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGAAACTCCCCATaGACTGATGTGGTCCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LCSKCANSTRKYSLHSKKSGNSP*TDVVPG Trigger: CCCAGGGACCACATCAGTGCATGGGGAGTTTCCACT...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAGTTGAGACAGGATGCTaGAGTGGAAACTCCCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: LCSKCANSTRKYSLHSKKVETGC*SGNSPC Trigger: GCATGGGGAGTTTCCACTTCAGCATCCTGTCTCAAC...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCTGGTGTTTTTGTGAGTaGCTGCTTGTTGAGACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GVLFLSQFGDSAATNACPWCFCE*LLVETG Trigger: TCCTGTCTCAACAAGCAGTCACTCACAAAAACACCA...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | ATCATGTTGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCAATCCACAGAGGTCAGAGGGGGCAATGCTaGCTGTGGAATGTCCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: IMLISVKLQPPRISIHRGQRGQC*LWNVPL Trigger: CAGGGGGACATTCCACAGCCAGCATTGCCCCCTCTG...ACCTCTGTGGATTGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGGCATGGCCTGGGATaGAGGAGAAATCGCTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: CSKCANSTRKYSLHSKKSGHGLG*RRNRYC Trigger: ACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCC...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTCCAAAGGGCATGGCCTaGGATGGAGGAGAAATCGCT | + |
|
Preference number: 2 (lower is better) Translates to: CSKCANSTRKYSLHSKKSPKGMA*DGGEIA Trigger: AGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGG...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGATGACAAACCTTGGTaGGCTACAGAGTCCCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: CSKCANSTRKYSLHSKKSDDKPW*ATESLD Trigger: GTCCAGGGACTCTGTAGCTCACCAAGGTTTGTCATC...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTAGTTTTTGTGAGTGACTaGTTGTTGAGACAGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVVFVSD*LLRQDA Trigger: AGCATCCTGTCTCAACAAGCAGTCACTCACAAAAAC...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTGTTTTTGTGAGTGACTaGTTGTTGAGACAGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSVFVSD*LLRQDA Trigger: AGCATCCTGTCTCAACAAGCAGTCACTCACAAAAAC...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATCGAGTAACAGACTCTTaGTCTATAATCCAGGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHRVTDS*SIIQAL Trigger: AAGAGCCTGGATTATAGACCAAGAGTCTGTTACTCG...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGTACCGCTTCAAGTCCTaGACCTTGCTGAGCCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: GFCRFYHILRLFKTCSKGYRFKS*TLLSQT Trigger: AGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTA...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTCGAGTAACAGACTCTTaGTCTATAATCCAGGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: MAWDGGEIATVISHALKVRVTDS*SIIQAL Trigger: AAGAGCCTGGATTATAGACCAAGAGTCTGTTACTCG...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTTACTGTCATTTCACATaGTTTGAAGGTTCCCCGTTT | + |
|
Preference number: 2 (lower is better) Translates to: CSKCANSTRKYSLHSKKSYCHFT*FEGSPF Trigger: AAACGGGGAACCTTCAAAGCATGTGAAATGACAGTA...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR GCA 72 bp | CACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTaGCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLAARGRKCPHS*PCPWPSSVAQE Trigger: TTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR GCA 72 bp | AGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTaGCCCCATAGTTGCCCATGCCCATGGCCCTCGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RVPGHLAARGRK*PHSCPCPWPSS Trigger: ACTCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR CCA 72 bp | AGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATaGCCCTCGAGTGTGGCTCAGGAAGCAAGCTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: RGRKCPHSCPCP*PSSVAQEASWT Trigger: GGTCCAGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACAACATGCTGAGCTTTaGACTGAGCCCACCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: WQPGVESAPIVAHAHGPRQHAEL*TEPTSL Trigger: CAGGCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| 3UTR TCA 72 bp | CATGGCGTGAGCTCCCGCTTAGATGACAAACCTTGGTaGGCTACAGAGTCCCTGGACACCTGGCAGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HGVSSRLDDKPW*ATESLDTWQPG Trigger: CCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAAGGTTTGTCATCTAAGCGGGAGCTCACGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCAACATGCTGAGCTTTaGACTGAGCCCACCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVSYRVPGHLAARGRKCPQHAEL*TEPTSL Trigger: CAGGCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTG...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATAATGCCTGTCCCACATaGCTGCCTGGCCCAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: LDTWQPGVESAPIVAHAHNACPT*LPGPDI Trigger: AATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATT...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCGAGGGCAGGGCCTGTTaGCAGCCCCAGTTTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GVLFLSQFGDSAATNACPEGRAC*QPQFLW Trigger: CCAAAGAAACTGGGGCTGCAAACAGGCCCTGCCCTC...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR GCA 72 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTaGACCTTGCTGAGCCAGACTCCAGAGCCCTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PRFCNSYYRFKS*TLLSQTPEPSG Trigger: GCCTGAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTAGTTCACTCCGTCATCTaGCCCAGCAGGCCCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVVHSVI*PSRPRS Trigger: TGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAAC...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTGAGGGCAGGGCCTGTTaGCAGCCCCAGTTTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSEGRAC*QPQFLW Trigger: CCAAAGAAACTGGGGCTGCAAACAGGCCCTGCCCTC...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR TCA 72 bp | GTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTaGGCCAGACTCCAGAGCCCTCAGGCCAGTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: VTHTTASSPAPC*ARLQSPQASSL Trigger: GAGTGAACTGGCCTGAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR TCA 72 bp | GATGGGACCCCCTTCTCTCTGCTTAGACCCAAAGTCTaGGGCAAACCAGGCTGGCATCCAGAACCCATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: DGTPFSLLRPKV*GKPGWHPEPMY Trigger: GTACATGGGTTCTGGATGCCAGCCTGGTTTGCCTCAGACTTTGGGTCTAAGCAGAGAGAAGGGGGTCCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR CCA 72 bp | CAGGATGCTGAAGTGGAAACTCCCCATGCACTGATGTaGTCCCTGGGCTGTGAGCAGAGACCAGTCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QDAEVETPHALM*SLGCEQRPVLC Trigger: ACAAAGGACTGGTCTCTGCTCACAGCCCAGGGACCACATCAGTGCATGGGGAGTTTCCACTTCAGCATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGGTTCACTCCGTCATCTaGCCCAGCAGGCCCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: LQRAWPGMEEKSLLSFHMVHSVI*PSRPRS Trigger: TGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAAC...CATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR TCA 72 bp | GGAAACTCCCCATGCACTGATGTGGTCCCTGGGCTGTaGGCAGAGACCAGTCCTTTGTTGGATTCTGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GNSPCTDVVPGL*AETSPLLDSVG Trigger: ACCTACAGAATCCAACAAAGGACTGGTCTCTGCTCACAGCCCAGGGACCACATCAGTGCATGGGGAGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR GCA 72 bp | TTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATaGCTGTCCCACATTGCTGCCTGGCCCAGACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: FPISVWGLSSHQ*LSHIAAWPRHS Trigger: AGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGTTCACTCCGTCATCTaGCCCAGCAGGCCCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: GHGLGWRRNRYCHFTCFEVHSVI*PSRPRS Trigger: TGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAAC...TTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR GCA 72 bp | CCCATCGGGAGTTCAGGATTCCCTCTGCAGCAAGTGTaGAAACTCCACACGCAAGTACAGTCTACACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PIGSSGFPLQQV*KLHTQVQSTQQ Trigger: TTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAGGGAATCCTGAACTCCCGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGCCAAAGACTTCCCATCCTTCAAGTCCTGCACCTaGCTGAGCCAGACTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PHASTVYTARKVAKDFPSFKSCT*LSQTPE Trigger: CTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAA...GGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTAGTGAGTGACTGCTTGTaGAGACAGGATGCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVVSDCL*RQDAEV Trigger: CACTTCAGCATCCTGTCTCAACAAGCAGTCACTCAC...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAACAACATGCTGAGCTTTaGACTGAGCCCACCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCSKCANSTRKYSLHSKKQHAEL*TEPTSL Trigger: CAGGCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTG...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTAATGCCTGTCCCACATaGCTGCCTGGCCCAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: CSKCANSTRKYSLHSKKSNACPT*LPGPDI Trigger: AATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATT...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAAGGGTGCAAAGAAATaGATGGGACCCCCTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCSKCANSTRKYSLHSKKKGAKK*MGPPSL Trigger: GAGAGAAGGGGGTCCCATCAATTTCTTTGCACCCTT...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR GCA 72 bp | TGCAGCCCCAGTTTCTTTGGTGTTTTTGTGAGTGACTaGTTGTTGAGACAGGATGCTGAAGTGGAAACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSPSFFGVFVSD*LLRQDAEVETP Trigger: GGGAGTTTCCACTTCAGCATCCTGTCTCAACAAGCAGTCACTCACAAAAACACCAAAGAAACTGGGGCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR-3UTR CAA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGGTTCACTCCGTCATCTaGCCCAGCAGGCCCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: GFCRFYHILRLFKTCSKGVHSVI*PSRPRS Trigger: TGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAAC...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR CCA 72 bp | CTCTTTAAAACCTGCTCCAAAGGGCATGGCCTGGGATaGAGGAGAAATCGCTACTGTCATTTCACATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFKTCSKGHGLG*RRNRYCHFTCF Trigger: AAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTGCTCCTTGGGGGAGCTaGGGCCCGGAGACTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: APIVAHAHGPRVWLRKQAAPWGS*GPETWR Trigger: TCTCCAAGTCTCCGGGCCCCAGCTCCCCCAAGGAGC...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACCCCCTCCCAGCTCTTaGTGGCCTGCCCAAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQPGVESAPIVAHAHGPRPPPSS*WPAQRS Trigger: GCTTCTTTGGGCAGGCCATCAAGAGCTGGGAGGGGG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000101640.10 |
||
| CDS-3UTR TCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCGGACAGGGGTCCCATTaGTCTCCAAGATGCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSYRVPGHLAARGRKCPGQGSH*SPRCGP Trigger: GGGACCGCATCTTGGAGATCAATGGGACCCCTGTCC...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGACAGGGGTCCCATTaGTCTCCAAGATGCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDTWQPGVESAPIVAHAHGQGSH*SPRCGP Trigger: GGGACCGCATCTTGGAGATCAATGGGACCCCTGTCC...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGATGCCTTTGGCAAACCTaGCCTTCTGTTGCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WQPGVESAPIVAHAHGPRCLWQT*PSVARG Trigger: TCCCCTGGCAACAGAAGGTCAGGTTTGCCAAAGGCA...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACGAGTCCTCCAGCTTTaGGAATGCCGGTCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WQPGVESAPIVAHAHGPRRVLQL*ECRSAF Trigger: GAAAGCAGACCGGCATTCTCAAAGCTGGAGGACTCG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTCCGGAGACTTGGAGATaGTGTTACTGCGCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APIVAHAHGPRVWLRKQAPETWR*CYCASE Trigger: CTCTGAGGCGCAGTAACAGCATCTCCAAGTCTCCGG...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGGGTCCCCAGGGTGGATaGCATTTCGGTTGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSPQASSLRHLAQQAQIMGPQGG*HFGCWD Trigger: GTCCCAACAACCGAAATGCCATCCACCCTGGGGACC...CATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGTCCCCAGGGTGGATaGCATTTCGGTTGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LDTWQPGVESAPIVAHAHGPQGG*HFGCWD Trigger: GTCCCAACAACCGAAATGCCATCCACCCTGGGGACC...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTATGCGGTCCCCAGGGTaGATGGCATTTCGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: APIVAHAHGPRVWLRKQAMRSPG*MAFRLL Trigger: CAACAACCGAAATGCCATCCACCCTGGGGACCGCAT...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGAATGCGGTCCCCAGGGTaGATGGCATTTCGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WQPGVESAPIVAHAHGPRMRSPG*MAFRLL Trigger: CAACAACCGAAATGCCATCCACCCTGGGGACCGCAT...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACATAGTACCAGTTGGTaGGGGATTCCTGGCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: WQPGVESAPIVAHAHGPRHSTSW*GIPGIR Trigger: CCGAATGCCAGGAATCCCTCACCAACTGGTACTATG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR TCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATTGCCTTTGGCAAACCTaGCCTTCTGTTGCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDTWQPGVESAPIVAHAHCLWQT*PSVARG Trigger: TCCCCTGGCAACAGAAGGTCAGGTTTGCCAAAGGCA...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGCCGGAGACTTGGAGATaGTGTTACTGCGCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSPQASSLRHLAQQAQIMPETWR*CYCASE Trigger: CTCTGAGGCGCAGTAACAGCATCTCCAAGTCTCCGG...CATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGGGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGGTGGCCTTCTCTACTaGAGGCCTTTTCCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WQPGVESAPIVAHAHGPRGGLLY*RPFPLF Trigger: GAAGAGAGGAAAAGGCCTCCAGTAGAGAAGGCCACC...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTAGGTGCGTTTCTTGGTaGTGGCCTTCTCTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: APIVAHAHGPRVWLRKQARCVSW*WPSLLE Trigger: CTCCAGTAGAGAAGGCCACCACCAAGAAACGCACCT...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGGATGAGACAGTTGTGTaGGTTCAGGTCCCGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSPQASSLRHLAQQAQIMDETVV*VQVPVD Trigger: ATCCACCGGGACCTGAACTCACACAACTGTCTCATC...CATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGGGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTTTCTACTATAAGCCGTaGCAGCCCAAAGTCGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: APIVAHAHGPRVWLRKQAFYYKP*QPKVGY Trigger: GTAGCCGACTTTGGGCTGTCACGGCTTATAGTAGAA...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGATCACCTTGCAACTCATaGAGGCAAAGCACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WQPGVESAPIVAHAHGPRSPCNS*RQSTLG Trigger: ACCCAGAGTGCTTTGCCTGCATGAGTTGCAAGGTGA...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR GCA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTTCACCTTGCAACTCATaGAGGCAAAGCACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: APIVAHAHGPRVWLRKQASPCNS*RQSTLG Trigger: ACCCAGAGTGCTTTGCCTGCATGAGTTGCAAGGTGA...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATTTGGTGAGGGATTCCTaGCATTCGGAACACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDTWQPGVESAPIVAHAHLVRDS*HSEHRK Trigger: CTTCCGGTGTTCCGAATGCCAGGAATCCCTCACCAA...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101638.4 |
||
| CDS-3UTR CCA 90 bp | CTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCCCAGCCACCATGGCTaGCCCCGTCATCAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQRAWPGMEEKSLLSFHMPSHHG*PRHQQG Trigger: TCCCTGCTGATGACGGGGCCAGCCATGGTGGCTGGG...CATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATCCCAGCCACCATGGCTaGCCCCGTCATCAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHPSHHG*PRHQQG Trigger: TCCCTGCTGATGACGGGGCCAGCCATGGTGGCTGGG...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATGCTCCTTGGGGGAGCTaGGGCCCGGAGACTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHAPWGS*GPETWR Trigger: TCTCCAAGTCTCCGGGCCCCAGCTCCCCCAAGGAGC...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGACTCCAGAGCCCTCCCGGAGACTTGGAGATaGTGTTACTGCGCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LILPLQVLHLAEPDSRALPETWR*CYCASE Trigger: CTCTGAGGCGCAGTAACAGCATCTCCAAGTCTCCGG...GAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATCAGTGTAGCGCTTTTTaGGGTCACTCTTGCGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDTWQPGVESAPIVAHAHQCSAF*GHSCVR Trigger: CCTTACGCAAGAGTGACCGCAAAAAGCGCTACACTG...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGCAGTGTAGCGCTTTTTaGGGTCACTCTTGCGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSPQASSLRHLAQQAQIMQCSAF*GHSCVR Trigger: CCTTACGCAAGAGTGACCGCAAAAAGCGCTACACTG...CATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGGGCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGAAGAATTCTCCAAACTTaGCCCAGTAGTCCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WQPGVESAPIVAHAHGPRRILQT*PSSPCG Trigger: GCCACAAGGACTACTGGGCCAAGTTTGGAGAATTCT...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | CCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGCCAAAGACTTCCCATCCCCCAGCCACCATGGCTaGCCCCGTCATCAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHASTVYTARKVAKDFPSPSHHG*PRHQQG Trigger: TCCCTGCTGATGACGGGGCCAGCCATGGTGGCTGGG...GGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCAGCTGGTCCAGGCGCTaGGGCACAGGGTCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVLFLSQFGDSAATNACPSWSRR*GTGSCS Trigger: TGAACATGACCCTGTGCCCCAGCGCCTGGACCAGCT...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATATACCTGCCCAATaGTCTCACAGAGAACGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSYRVPGHLAARGRKCPHIPAQ*SHRERS Trigger: GGATCGTTCTCTGTGAGATCATTGGGCAGGTATATG...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATCATATACCTGCCCAATaGTCTCACAGAGAACGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LDTWQPGVESAPIVAHAHHIPAQ*SHRERS Trigger: GGATCGTTCTCTGTGAGATCATTGGGCAGGTATATG...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCAGAATTCTCCAAACTTaGCCCAGTAGTCCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSYRVPGHLAARGRKCPRILQT*PSSPCG Trigger: GCCACAAGGACTACTGGGCCAAGTTTGGAGAATTCT...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCAGCTGGTCCAGGCGCTaGGGCACAGGGTCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNPCTVRQHAELLTEPTSSWSRR*GTGSCS Trigger: TGAACATGACCCTGTGCCCCAGCGCCTGGACCAGCT...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCCGAGTCCTCCAGCTTTaGGAATGCCGGTCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVLFLSQFGDSAATNACPRVLQL*ECRSAF Trigger: GAAAGCAGACCGGCATTCTCAAAGCTGGAGGACTCG...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTACCGGAGACTTGGAGATaGTGTTACTGCGCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVPETWR*CYCASE Trigger: CTCTGAGGCGCAGTAACAGCATCTCCAAGTCTCCGG...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTGGTCCCCAGGGTGGATaGCATTTCGGTTGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSGPQGG*HFGCWD Trigger: GTCCCAACAACCGAAATGCCATCCACCCTGGGGACC...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGCTCCTTGGGGGAGCTaGGGCCCGGAGACTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSKCANSTRKYSLHSKKSAPWGS*GPETWR Trigger: TCTCCAAGTCTCCGGGCCCCAGCTCCCCCAAGGAGC...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTGCTCCTTGGGGGAGCTaGGGCCCGGAGACTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MAWDGGEIATVISHALKVAPWGS*GPETWR Trigger: TCTCCAAGTCTCCGGGCCCCAGCTCCCCCAAGGAGC...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGTTGATTGGTGGCCTTCTCTACTaGAGGCCTTTTCCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQASSLRHLAQQAQIMLIGGLLY*RPFPLF Trigger: GAAGAGAGGAAAAGGCCTCCAGTAGAGAAGGCCACC...AATCAACATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR CAA 72 bp | TTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTaGCTGAGCCAGACTCCAGAGCCCTCAGGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCNSYYRFKSCT*LSQTPEPSGQF Trigger: GAACTGGCCTGAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR CAA 72 bp | AAGGCCCAGCTCAGGGTGTTCTTTTCCTATCTCAGTTaGGGGACTCAGCAGCCACCAATGCCTGTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KAQLRVFFSYLS*GTQQPPMPVPH Trigger: ATGTGGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACCCTGAGCTGGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCTGCCTTTGGCAAACCTaGCCTTCTGTTGCCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QNPCTVRQHAELLTEPTSCLWQT*PSVARG Trigger: TCCCCTGGCAACAGAAGGTCAGGTTTGCCAAAGGCA...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTAGATGAGACAGTTGTGTaGGTTCAGGTCCCGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVDETVV*VQVPVD Trigger: ATCCACCGGGACCTGAACTCACACAACTGTCTCATC...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGACTCCAGAGCCCTCCATATACCTGCCCAATaGTCTCACAGAGAACGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LILPLQVLHLAEPDSRALHIPAQ*SHRERS Trigger: GGATCGTTCTCTGTGAGATCATTGGGCAGGTATATG...GAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCCGAGTCCTCCAGCTTTaGGAATGCCGGTCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNPCTVRQHAELLTEPTSRVLQL*ECRSAF Trigger: GAAAGCAGACCGGCATTCTCAAAGCTGGAGGACTCG...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | GGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAAGGGGTCTCTGGAGGTaGAGTAAGCCGGGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GHGLGWRRNRYCHFTCFERGLWR*SKPGQT Trigger: TGTCTGTCCCGGCTTACTTCACCTCCAGAGACCCCT...TTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR GCA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCTGGAGATGCTGTTACTaGGCCTCAGAGAACGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVLFLSQFGDSAATNACPWRCCY*ASENVS Trigger: GGAGACGTTCTCTGAGGCGCAGTAACAGCATCTCCA...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATAACCTGACCTTCTGTTaGCAGGGGAACGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHNLTFC*QGNGST Trigger: TGTGGACCCGTTCCCCTGGCAACAGAAGGTCAGGTT...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTAGCAAAGCACTCTGGGTaGTACTTAAACTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVAKHSG*YLNSPA Trigger: GGCTGGGGAGTTTAAGTACCACCCAGAGTGCTTTGC...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | CCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGCCAAAGACTTCCCATCCGGTCCCCAGGGTGGATaGCATTTCGGTTGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHASTVYTARKVAKDFPSGPQGG*HFGCWD Trigger: GTCCCAACAACCGAAATGCCATCCACCCTGGGGACC...GGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATATGCGGTCCCCAGGGTaGATGGCATTTCGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHMRSPG*MAFRLL Trigger: CAACAACCGAAATGCCATCCACCCTGGGGACCGCAT...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTAGGTGGCCTTCTCTACTaGAGGCCTTTTCCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVGGLLY*RPFPLF Trigger: GAAGAGAGGAAAAGGCCTCCAGTAGAGAAGGCCACC...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGTTGATTGTAAGGTGCGTTTCTTaGTGGTGGCCTTCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PQASSLRHLAQQAQIMLIVRCVS*WWPSLL Trigger: CAGTAGAGAAGGCCACCACCAAGAAACGCACCTTAC...AATCAACATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTATCAGGTCCCGGTGGATaGTGCACATGGAGTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVSGPGG*CTWSVN Trigger: ATTTACACTCCATGTGCATCATCCACCGGGACCTGA...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCGATGAGACAGTTGTGTaGGTTCAGGTCCCGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QNPCTVRQHAELLTEPTSDETVV*VQVPVD Trigger: ATCCACCGGGACCTGAACTCACACAACTGTCTCATC...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGTTCTACTATAAGCCGTaGCAGCCCAAAGTCGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PRFCNSYYRFKSCTLLSQFYYKP*QPKVGY Trigger: GTAGCCGACTTTGGGCTGTCACGGCTTATAGTAGAA...CTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCTCACCTTGCAACTCATaGAGGCAAAGCACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVLFLSQFGDSAATNACPSPCNS*RQSTLG Trigger: ACCCAGAGTGCTTTGCCTGCATGAGTTGCAAGGTGA...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR GCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTGGAGATGCTGTTACTaGGCCTCAGAGAACGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHWRCCY*ASENVS Trigger: GGAGACGTTCTCTGAGGCGCAGTAACAGCATCTCCA...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGTTGATTTTTTGCGGTCACTCTTaGGTAAGGTGCGTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQASSLRHLAQQAQIMLIFCGHS*VRCVSW Trigger: CCAAGAAACGCACCTTACGCAAGAGTGACCGCAAAA...AATCAACATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGCAGTGTAGCGCTTTTTaGGGTCACTCTTGCGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRFCNSYYRFKSCTLLSQQCSAF*GHSCVR Trigger: CCTTACGCAAGAGTGACCGCAAAAAGCGCTACACTG...CTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCTCTCATCGTAGCTCTTaGCATTCAGCATCTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNPCTVRQHAELLTEPTSSHRSS*HSASRG Trigger: CCCCCGAGATGCTGAATGGCAAGAGCTACGATGAGA...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTCTCATCGTAGCTCTTaGCATTCAGCATCTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHSHRSS*HSASRG Trigger: CCCCCGAGATGCTGAATGGCAAGAGCTACGATGAGA...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCAGCAGGGAGCACCCATaGCAGAATTCTCCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVLFLSQFGDSAATNACPSREHP*QNSPNL Trigger: CAAGTTTGGAGAATTCTGCCATGGGTGCTCCCTGCT...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTAGCTGGTCCAGGCGCTaGGGCACAGGGTCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MAWDGGEIATVISHALKVSWSRR*GTGSCS Trigger: TGAACATGACCCTGTGCCCCAGCGCCTGGACCAGCT...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGAGGTGCGTTTCTTGGTaGTGGCCTTCTCTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQRAWPGMEEKSLLSFHMRCVSW*WPSLLE Trigger: CTCCAGTAGAGAAGGCCACCACCAAGAAACGCACCT...CATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTTCAGGTCCCGGTGGATaGTGCACATGGAGTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSSGPGG*CTWSVN Trigger: ATTTACACTCCATGTGCATCATCCACCGGGACCTGA...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGTCAGGTCCCGGTGGATaGTGCACATGGAGTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQRAWPGMEEKSLLSFHMSGPGG*CTWSVN Trigger: ATTTACACTCCATGTGCATCATCCACCGGGACCTGA...CATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGCATATACCTGCCCAATaGTCTCACAGAGAACGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRFCNSYYRFKSCTLLSQHIPAQ*SHRERS Trigger: GGATCGTTCTCTGTGAGATCATTGGGCAGGTATATG...CTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAACGAGTCCTCCAGCTTTaGGAATGCCGGTCTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSKCANSTRKYSLHSKKRVLQL*ECRSAF Trigger: GAAAGCAGACCGGCATTCTCAAAGCTGGAGGACTCG...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTCGGAAGCAGGAGCCATaGCAGGCTTCATTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSKCANSTRKYSLHSKKSRKQEP*QASLAV Trigger: GACTGCCAATGAAGCCTGGCATGGCTCCTGCTTCCG...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101638.4 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAACCTGACCTTCTGTTaGCAGGGGAACGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LCSKCANSTRKYSLHSKKNLTFC*QGNGST Trigger: TGTGGACCCGTTCCCCTGGCAACAGAAGGTCAGGTT...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGTTTTGCGGTCACTCTTaGGTAAGGTGCGTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRFCNSYYRFKSCTLLSQFCGHS*VRCVSW Trigger: CCAAGAAACGCACCTTACGCAAGAGTGACCGCAAAA...CTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGAGAATTCTCCAAACTTaGCCCAGTAGTCCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRFCNSYYRFKSCTLLSQRILQT*PSSPCG Trigger: GCCACAAGGACTACTGGGCCAAGTTTGGAGAATTCT...CTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | GGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGCAAAGCACTCTGGGTaGTACTTAAACTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHGLGWRRNRYCHFTCFEAKHSG*YLNSPA Trigger: GGCTGGGGAGTTTAAGTACCACCCAGAGTGCTTTGC...TTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATGTAAGGTGCGTTTCTTaGTGGTGGCCTTCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHVRCVS*WWPSLL Trigger: CAGTAGAGAAGGCCACCACCAAGAAACGCACCTTAC...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | ATCATGTTGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCAATCCACAGAGGTGTGTGTCCGGTGCTCTaGATGTGGGGAGGAAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: IMLISVKLQPPRISIHRGVCPVL*MWGGSR Trigger: CCGACTTCCTCCCCACATGCAGAGCACCGGACACAC...ACCTCTGTGGATTGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCTTTTGCGGTCACTCTTaGGTAAGGTGCGTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNPCTVRQHAELLTEPTSFCGHS*VRCVSW Trigger: CCAAGAAACGCACCTTACGCAAGAGTGACCGCAAAA...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAGGTGGCCTTCTCTACTaGAGGCCTTTTCCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSKCANSTRKYSLHSKKGGLLY*RPFPLF Trigger: GAAGAGAGGAAAAGGCCTCCAGTAGAGAAGGCCACC...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGGTGCGTTTCTTGGTaGTGGCCTTCTCTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCSKCANSTRKYSLHSKKRCVSW*WPSLLE Trigger: CTCCAGTAGAGAAGGCCACCACCAAGAAACGCACCT...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR CAA 72 bp | TCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGTaGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRHLAQQAQIM*ISVKLQPPRIS Trigger: TGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| 3UTR CAA 72 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTaGACTGAGCCCACCAGCCTGGATACAGGGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QNPCTVRQHAEL*TEPTSLDTGLL Trigger: TAAAAGCCCTGTATCCAGGCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTCATAGTACCAGTTGGTaGGGGATTCCTGGCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSKCANSTRKYSLHSKKSHSTSW*GIPGIR Trigger: CCGAATGCCAGGAATCCCTCACCAACTGGTACTATG...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR TCA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGGGACAGGGGTCCCATTaGTCTCCAAGATGCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GFCRFYHILRLFKTCSKGGQGSH*SPRCGP Trigger: GGGACCGCATCTTGGAGATCAATGGGACCCCTGTCC...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAATCAGGTCCCGGTGGATaGTGCACATGGAGTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCSKCANSTRKYSLHSKKSGPGG*CTWSVN Trigger: ATTTACACTCCATGTGCATCATCCACCGGGACCTGA...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAATTCTACTATAAGCCGTaGCAGCCCAAAGTCGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LCSKCANSTRKYSLHSKKFYYKP*QPKVGY Trigger: GTAGCCGACTTTGGGCTGTCACGGCTTATAGTAGAA...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTTGGAGATGCTGTTACTaGGCCTCAGAGAACGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSKCANSTRKYSLHSKKSWRCCY*ASENVS Trigger: GGAGACGTTCTCTGAGGCGCAGTAACAGCATCTCCA...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTTGGAGATGCTGTTACTaGGCCTCAGAGAACGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MAWDGGEIATVISHALKVWRCCY*ASENVS Trigger: GGAGACGTTCTCTGAGGCGCAGTAACAGCATCTCCA...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTTCTCATCGTAGCTCTTaGCATTCAGCATCTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MAWDGGEIATVISHALKVSHRSS*HSASRG Trigger: CCCCCGAGATGCTGAATGGCAAGAGCTACGATGAGA...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGAGCTGGTCCAGGCGCTaGGGCACAGGGTCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFCRFYHILRLFKTCSKGSWSRR*GTGSCS Trigger: TGAACATGACCCTGTGCCCCAGCGCCTGGACCAGCT...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGAGGGGTCTCTGGAGGTaGAGTAAGCCGGGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GFCRFYHILRLFKTCSKGRGLWR*SKPGQT Trigger: TGTCTGTCCCGGCTTACTTCACCTCCAGAGACCCCT...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR GCA 90 bp | ATCATGTTGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCAATCCACAGAGGTAACCTGACCTTCTGTTaGCAGGGGAACGGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IMLISVKLQPPRISIHRGNLTFC*QGNGST Trigger: TGTGGACCCGTTCCCCTGGCAACAGAAGGTCAGGTT...ACCTCTGTGGATTGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | ATCATGTTGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCAATCCACAGAGGTGCAAAGCACTCTGGGTaGTACTTAAACTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IMLISVKLQPPRISIHRGAKHSG*YLNSPA Trigger: GGCTGGGGAGTTTAAGTACCACCCAGAGTGCTTTGC...ACCTCTGTGGATTGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTTTGGTGAGGGATTCCTaGCATTCGGAACACCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MAWDGGEIATVISHALKVLVRDS*HSEHLK Trigger: CTTTAGGTGTTCCGAATGCCAGGAATCCCTCACCAA...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CCA 90 bp | TGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAGTTTGGTGAGGGATTCCTaGCATTCGGAACACCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSKCANSTRKYSLHSKKSLVRDS*HSEHLK Trigger: CTTTAGGTGTTCCGAATGCCAGGAATCCCTCACCAA...ACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| 3UTR CAA 72 bp | CCCAGTTTCTTTGGTGTTTTTGTGAGTGACTGCTTGTaGAGACAGGATGCTGAAGTGGAAACTCCCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSFFGVFVSDCL*RQDAEVETPHA Trigger: TGCATGGGGAGTTTCCACTTCAGCATCCTGTCTCAACAAGCAGTCACTCACAAAAACACCAAAGAAACTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR TCA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGGATGAGACAGTTGTGTaGGTTCAGGTCCCGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFCRFYHILRLFKTCSKGDETVV*VQVPVD Trigger: ATCCACCGGGACCTGAACTCACACAACTGTCTCATC...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | ATCATGTTGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCAATCCACAGAGGTCAGTGTAGCGCTTTTTaGGGTCACTCTTGCGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IMLISVKLQPPRISIHRGQCSAF*GHSCVR Trigger: CCTTACGCAAGAGTGACCGCAAAAAGCGCTACACTG...ACCTCTGTGGATTGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGTCTCATCGTAGCTCTTaGCATTCAGCATCTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFCRFYHILRLFKTCSKGSHRSS*HSASRG Trigger: CCCCCGAGATGCTGAATGGCAAGAGCTACGATGAGA...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGAGGTGCGTTTCTTGGTaGTGGCCTTCTCTACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFCRFYHILRLFKTCSKGRCVSW*WPSLLE Trigger: CTCCAGTAGAGAAGGCCACCACCAAGAAACGCACCT...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | ATCATGTTGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCAATCCACAGAGGTGTAAGGTGCGTTTCTTaGTGGTGGCCTTCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: IMLISVKLQPPRISIHRGVRCVS*WWPSLL Trigger: CAGTAGAGAAGGCCACCACCAAGAAACGCACCTTAC...ACCTCTGTGGATTGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR GCA 90 bp | ATCATGTTGATTAGTGTAAAGCTACAGCCTCCCAGAATCTCAATCCACAGAGGTTTTTGCGGTCACTCTTaGGTAAGGTGCGTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IMLISVKLQPPRISIHRGFCGHS*VRCVSW Trigger: CCAAGAAACGCACCTTACGCAAGAGTGACCGCAAAA...ACCTCTGTGGATTGAGATTCTGGGAGGCTGTAGCTTTACACTAATCAACATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CCA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGGTAAGGTGCGTTTCTTaGTGGTGGCCTTCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GFCRFYHILRLFKTCSKGVRCVS*WWPSLL Trigger: CAGTAGAGAAGGCCACCACCAAGAAACGCACCTTAC...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS CCA 90 bp | GTGTCCAAGGTGCTGAGCATGAGCGTGTGTCCGGTGCTCTGCATGTaGGGAGGAAGTCGGGCATCTAGCCGTAGCTGGTCCAGGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSKVLSMSVCPVLCM*GGSRASSRSWSRRW Trigger: CCAGCGCCTGGACCAGCTACGGCTAGATGCCCGACTTCCTCCCCACATGCAGAGCACCGGACACACGCTCATGCTCAGCACCTTGGACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS GCA 90 bp | CTTCATTGGCAGTCCTATAGAGCCTCTGGCTCAGGGGAACATAGGTaGCACAGCCCCGACACCTCCAGGCTTCATCACCCGCCAGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LHWQSYRASGSGEHR*HSPDTSRLHHPPAP Trigger: CGGCGCTGGCGGGTGATGAAGCCTGGAGGTGTCGGGGCTGTGGCACCTATGTTCCCCTGAGCCAGAGGCTCTATAGGACTGCCAATGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101638.4 |
||
| CDS-3UTR CAA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGAAAACCTGACCTTCTGTaGCCAGGGGAACGGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WQPGVESAPIVAHAHGPRKPDLL*PGERVH Trigger: GTGGACCCGTTCCCCTGGCAACAGAAGGTCAGGTTT...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGACCAGAGGAGATGCCTTaGGCAAACCTGACCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WQPGVESAPIVAHAHGPRPEEMP*ANLTFC Trigger: ACAGAAGGTCAGGTTTGCCAAAGGCATCTCCTCTGG...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTCGTAAGGTGCGTTTCTaGGTGGTGGCCTTCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: APIVAHAHGPRVWLRKQARKVRF*VVAFST Trigger: AGTAGAGAAGGCCACCACCAAGAAACGCACCTTACG...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | TGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATGGCCCTCGAACGAGTCCTCCAGCTTaGAGAATGCCGGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WQPGVESAPIVAHAHGPRTSPPA*RMPVCF Trigger: AAAGCAGACCGGCATTCTCAAAGCTGGAGGACTCGT...TCGAGGGCCATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTGAGCTACAGAGTCCCTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCCAGAGGAGATGCCTTaGGCAAACCTGACCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVSYRVPGHLAARGRKCPPEEMP*ANLTFC Trigger: ACAGAAGGTCAGGTTTGCCAAAGGCATCTCCTCTGG...GGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAGGGACTCTGTAGCTCACCAA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGAGAACTCCGATGAACTaGAGCACATTAGGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSPQASSLRHLAQQAQIMRTPMN*STLGWS Trigger: GGACCACCCTAATGTGCTCAAGTTCATCGGAGTTCT...CATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGGGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCCATAGTTGCCCATGCCCATGGCCCTCGAGTGTGGCTCAGGAAGCAAGCTTTTTTGCGGTCACTCTaGCGTAAGGTGCGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: APIVAHAHGPRVWLRKQAFLRSL*RKVRFL Trigger: CAAGAAACGCACCTTACGCAAGAGTGACCGCAAAAA...AGCTTGCTTCCTGAGCCACACTCGAGGGCCATGGGCATGGGCAACTATGGGGGC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CAATGCCTGTCCCACATTGCTGCCTGGCCCAGACATTCTAGAGGATGTGCAGTAAAACCTGACCTTCTGTaGCCAGGGGAACGGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QCLSHIAAWPRHSRGCAVKPDLL*PGERVH Trigger: GTGGACCCGTTCCCCTGGCAACAGAAGGTCAGGTTT...TACTGCACATCCTCTAGAATGTCTGGGCCAGGCAGCAATGTGGGACAGGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGACTCCAGAGCCCTCACGAGTCCTCCAGCTTaGAGAATGCCGGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LILPLQVLHLAEPDSRALTSPPA*RMPVCF Trigger: AAAGCAGACCGGCATTCTCAAAGCTGGAGGACTCGT...GAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGACTCCAGAGCCCTCTCCTCAATGATCACCTaGCAACTCATGCAGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LILPLQVLHLAEPDSRALSSMIT*QLMQAK Trigger: CTTTGCCTGCATGAGTTGCAAGGTGATCATTGAGGA...GAGGGCTCTGGAGTCTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CAA 90 bp | CCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGCCAAAGACTTCCCATCCAAACCTGACCTTCTGTaGCCAGGGGAACGGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PHASTVYTARKVAKDFPSKPDLL*PGERVH Trigger: GTGGACCCGTTCCCCTGGCAACAGAAGGTCAGGTTT...GGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CTGGACACCTGGCAGCCAGGGGTAGAAAGTGCCCCCATAGTTGCCCATGCCCATACTGTCTTGTCCAATTaGATGAGACAGTTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDTWQPGVESAPIVAHAHTVLSN*MRQLCE Trigger: CTCACACAACTGTCTCATCAAATTGGACAAGACAGT...ATGGGCATGGGCAACTATGGGGGCACTTTCTACCCCTGGCTGCCAGGTGTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCCTCAGGCCAGTTCACTCCGTCATCTTGCCCAGCAGGCCCAGATCATGACTGTCTTGTCCAATTaGATGAGACAGTTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSPQASSLRHLAQQAQIMTVLSN*MRQLCE Trigger: CTCACACAACTGTCTCATCAAATTGGACAAGACAGT...CATGATCTGGGCCTGCTGGGCAAGATGACGGAGTGAACTGGCCTGAGGGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCCGTAAGGTGCGTTTCTaGGTGGTGGCCTTCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: GVLFLSQFGDSAATNACPRKVRF*VVAFST Trigger: AGTAGAGAAGGCCACCACCAAGAAACGCACCTTACG...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGGGCTTGTCTGCTTTATaGCATCCTCCACCTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PRFCNSYYRFKSCTLLSQGLSAL*HPPPPL Trigger: TAGAGGAGGTGGAGGATGCAATAAAGCAGACAAGCC...CTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CCCCGTTTCTGTAACTCATACTACCGCTTCAAGTCCTGCACCTTGCTGAGCCAGAGAACTCCGATGAACTaGAGCACATTAGGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRFCNSYYRFKSCTLLSQRTPMN*STLGWS Trigger: GGACCACCCTAATGTGCTCAAGTTCATCGGAGTTCT...CTGGCTCAGCAAGGTGCAGGACTTGAAGCGGTAGTATGAGTTACAGAAACGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | GGTGTTCTTTTCCTATCTCAGTTTGGGGACTCAGCAGCCACCAATGCCTGTCCCAGAACTCCGATGAACTaGAGCACATTAGGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVLFLSQFGDSAATNACPRTPMN*STLGWS Trigger: GGACCACCCTAATGTGCTCAAGTTCATCGGAGTTCT...GGGACAGGCATTGGTGGCTGCTGAGTCCCCAAACTGAGATAGGAAAAGAACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGCAGCAAGTGTGCAAACTCCACACGCAAGTACAGTCTACACAGCAAGAAAAAACCTGACCTTCTGTaGCCAGGGGAACGGGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LCSKCANSTRKYSLHSKKKPDLL*PGERVH Trigger: GTGGACCCGTTCCCCTGGCAACAGAAGGTCAGGTTT...TTTCTTGCTGTGTAGACTGTACTTGCGTGTGGAGTTTGCACACTTGCTGCAGAG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCCCAGAGGAGATGCCTTaGGCAAACCTGACCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QNPCTVRQHAELLTEPTSPEEMP*ANLTFC Trigger: ACAGAAGGTCAGGTTTGCCAAAGGCATCTCCTCTGG...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTCCAGAGGAGATGCCTTaGGCAAACCTGACCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSPEEMP*ANLTFC Trigger: ACAGAAGGTCAGGTTTGCCAAAGGCATCTCCTCTGG...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | AGGATGTGCAGTAGCTGCCACAAGGGTGCAAAGAAATTGATGGGACCCCCTTCTCGTAAGGTGCGTTTCTaGGTGGTGGCCTTCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: RMCSSCHKGAKKLMGPPSRKVRF*VVAFST Trigger: AGTAGAGAAGGCCACCACCAAGAAACGCACCTTACG...AGAAGGGGGTCCCATCAATTTCTTTGCACCCTTGTGGCAGCTACTGCACATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGACGAGTCCTCCAGCTTaGAGAATGCCGGTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQRAWPGMEEKSLLSFHMTSPPA*RMPVCF Trigger: AAAGCAGACCGGCATTCTCAAAGCTGGAGGACTCGT...CATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS CCA 90 bp | CAGTGTAGCGCTTTTTGCGGTCACTCTTGCGTAAGGTGCGTTTCTTaGTGGTGGCCTTCTCTACTGGAGGCCTTTTCCTCTCTTCTACTA | + |
|
Preference number: 5 (lower is better) Translates to: QCSAFCGHSCVRCVS*WWPSLLEAFSSLLL Trigger: TAGTAGAAGAGAGGAAAAGGCCTCCAGTAGAGAAGGCCACCACCAAGAAACGCACCTTACGCAAGAGTGACCGCAAAAAGCGCTACACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATGGCTTGTCTGCTTTATaGCATCCTCCACCTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHGLSAL*HPPPPL Trigger: TAGAGGAGGTGGAGGATGCAATAAAGCAGACAAGCC...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATAGAACTCCGATGAACTaGAGCACATTAGGGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHRTPMN*STLGWS Trigger: GGACCACCCTAATGTGCTCAAGTTCATCGGAGTTCT...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | GGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAACGTAAGGTGCGTTTCTaGGTGGTGGCCTTCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: GHGLGWRRNRYCHFTCFERKVRF*VVAFST Trigger: AGTAGAGAAGGCCACCACCAAGAAACGCACCTTACG...TTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATGTTGACCTCTTTCACTaGAACGGTGGTGGCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHVDLFH*NGGGIV Trigger: AACTATGCCACCACCGTTCAAGTGAAAGAGGTCAAC...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CAA 90 bp | CAGAACCCATGTACTGTTAGGCAACATGCTGAGCTTTTGACTGAGCCCACCAGCGTTGACCTCTTTCACTaGAACGGTGGTGGCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QNPCTVRQHAELLTEPTSVDLFH*NGGGIV Trigger: AACTATGCCACCACCGTTCAAGTGAAAGAGGTCAAC...GCTGGTGGGCTCAGTCAAAAGCTCAGCATGTTGCCTAACAGTACATGGGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CAA 90 bp | AAAACCTGCTCCAAAGGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTTTTGCGGTCACTCTaGCGTAAGGTGCGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KTCSKGHGLGWRRNRYCHFLRSL*RKVRFL Trigger: CAAGAAACGCACCTTACGCAAGAGTGACCGCAAAAA...ATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCCTTTGGAGCAGGTTTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS TCA 90 bp | GGCCTTCTCTACTGGAGGCCTTTTCCTCTCTTCTACTATAAGCCGTaGCAGCCCAAAGTCGGCTACTACCACTGTCTTGTCCAATTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLLYWRPFPLFYYKP*QPKVGYYHCLVQFD Trigger: ATCAAATTGGACAAGACAGTGGTAGTAGCCGACTTTGGGCTGTCACGGCTTATAGTAGAAGAGAGGAAAAGGCCTCCAGTAGAGAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | CCACACGCAAGTACAGTCTACACAGCAAGAAAAGTGGCCAAAGACTTCCCATCCGTTGACCTCTTTCACTaGAACGGTGGTGGCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PHASTVYTARKVAKDFPSVDLFH*NGGGIV Trigger: AACTATGCCACCACCGTTCAAGTGAAAGAGGTCAAC...GGATGGGAAGTCTTTGGCCACTTTTCTTGCTGTGTAGACTGTACTTGCGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CAA 90 bp | GGGCATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAATTTTTGCGGTCACTCTaGCGTAAGGTGCGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHGLGWRRNRYCHFTCFEFLRSL*RKVRFL Trigger: CAAGAAACGCACCTTACGCAAGAGTGACCGCAAAAA...TTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCATGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTGGCTTGTCTGCTTTATaGCATCCTCCACCTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: MAWDGGEIATVISHALKVGLSAL*HPPPPL Trigger: TAGAGGAGGTGGAGGATGCAATAAAGCAGACAAGCC...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTTCCTCAATGATCACCTaGCAACTCATGCAGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MAWDGGEIATVISHALKVSSMIT*QLMQAK Trigger: CTTTGCCTGCATGAGTTGCAAGGTGATCATTGAGGA...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCCTGGGATGGAGGAGAAATCGCTACTGTCATTTCACATGCTTTGAAGGTTACTGTCTTGTCCAATTaGATGAGACAGTTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MAWDGGEIATVISHALKVTVLSN*MRQLCE Trigger: CTCACACAACTGTCTCATCAAATTGGACAAGACAGT...AACCTTCAAAGCATGTGAAATGACAGTAGCGATTTCTCCTCCATCCCAGGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS-3UTR CAA 90 bp | GGATTCTGTAGGTTTTACCACATACTAAGACTCTTTAAAACCTGCTCCAAAGGGACTGTCTTGTCCAATTaGATGAGACAGTTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GFCRFYHILRLFKTCSKGTVLSN*MRQLCE Trigger: CTCACACAACTGTCTCATCAAATTGGACAAGACAGT...CCCTTTGGAGCAGGTTTTAAAGAGTCTTAGTATGTGGTAAAACCTACAGAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS GCA 72 bp | TCCAAGGTGCTGAGCATGAGCGTGTGTCCGGTGCTCTaGATGTGGGGAGGAAGTCGGGCATCTAGCCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SKVLSMSVCPVL*MWGGSRASSRS Trigger: GCTACGGCTAGATGCCCGACTTCCTCCCCACATGCAGAGCACCGGACACACGCTCATGCTCAGCACCTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS TCA 72 bp | GCCAGGGGAACGGGTCCACACTGCGCAGGAAGTCTTTaGGTGTGCCTCCCTCGATGTACTCGGTCAGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ARGTGPHCAGSL*VCLPRCTRSAD Trigger: ATCTGCTGACCGAGTACATCGAGGGAGGCACACTCAAAGACTTCCTGCGCAGTGTGGACCCGTTCCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS CCA 72 bp | CGGAACACCGGAAGCAGGAGCCATGCCAGGCTTCATTaGCAGTCCTATAGAGCCTCTGGCTCAGGGGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: RNTGSRSHARLH*QSYRASGSGEH Trigger: ATGTTCCCCTGAGCCAGAGGCTCTATAGGACTGCCAATGAAGCCTGGCATGGCTCCTGCTTCCGGTGTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101638.4 |
||
| CDS CAA 72 bp | AGAACAGGGAGAGCGCCTCGAACGAGTCCTCCAGCTTaGAGAATGCCGGTCTGCTTTCAGGCTCTAGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RTGRAPRTSPPA*RMPVCFQALVC Trigger: GCAAACTAGAGCCTGAAAGCAGACCGGCATTCTCAAAGCTGGAGGACTCGTTCGAGGCGCTCTCCCTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS CAA 72 bp | CGCTTTTTGCGGTCACTCTTGCGTAAGGTGCGTTTCTaGGTGGTGGCCTTCTCTACTGGAGGCCTTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RFLRSLLRKVRF*VVAFSTGGLFL Trigger: GAGGAAAAGGCCTCCAGTAGAGAAGGCCACCACCAAGAAACGCACCTTACGCAAGAGTGACCGCAAAAAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
||
| CDS TCA 72 bp | AGTACAGCTTCCCATCCTTCTCATAGTACCAGTTGGTaGGGGATTCCTGGCATTCGGAACACCGGAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STASHPSHSTSW*GIPGIRNTGSR Trigger: CCTGCTTCCGGTGTTCCGAATGCCAGGAATCCCTCACCAACTGGTACTATGAGAAGGATGGGAAGCTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101638.4 |
||
| CDS CCA 72 bp | GCTTTTTGCGGTCACTCTTGCGTAAGGTGCGTTTCTTaGTGGTGGCCTTCTCTACTGGAGGCCTTTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: AFCGHSCVRCVS*WWPSLLEAFSS Trigger: AGAGGAAAAGGCCTCCAGTAGAGAAGGCCACCACCAAGAAACGCACCTTACGCAAGAGTGACCGCAAAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| CDS CCA 72 bp | TTTTGCGGTCACTCTTGCGTAAGGTGCGTTTCTTGGTaGTGGCCTTCTCTACTGGAGGCCTTTTCCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FCGHSCVRCVSW*WPSLLEAFSSL Trigger: AAGAGAGGAAAAGGCCTCCAGTAGAGAAGGCCACCACCAAGAAACGCACCTTACGCAAGAGTGACCGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| CDS CAA 90 bp | TCTACTATAAGCCGTGACAGCCCAAAGTCGGCTACTACCACTGTCTaGTCCAATTTGATGAGACAGTTGTGTGAGTTCAGGTCCCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: STISRDSPKSATTTV*SNLMRQLCEFRSRW Trigger: CCACCGGGACCTGAACTCACACAACTGTCTCATCAAATTGGACAAGACAGTGGTAGTAGCCGACTTTGGGCTGTCACGGCTTATAGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| CDS TCA 72 bp | TACTGGAGGCCTTTTCCTCTCTTCTACTATAAGCCGTaGCAGCCCAAAGTCGGCTACTACCACTGTCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: YWRPFPLFYYKP*QPKVGYYHCLV Trigger: GACAAGACAGTGGTAGTAGCCGACTTTGGGCTGTCACGGCTTATAGTAGAAGAGAGGAAAAGGCCTCCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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| CDS CAA 72 bp | AGCCGTGACAGCCCAAAGTCGGCTACTACCACTGTCTaGTCCAATTTGATGAGACAGTTGTGTGAGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRDSPKSATTTV*SNLMRQLCEFR Trigger: CCTGAACTCACACAACTGTCTCATCAAATTGGACAAGACAGTGGTAGTAGCCGACTTTGGGCTGTCACGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101638.4 ENSMUST00000101640.10 ENSMUST00000101642.10 ENSMUST00000110029.9 |
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