Pregenerated sensors for LIME1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090077Ensembl transcript IDs: ENSMUST00000048077.12, ENSMUST00000108804.3, ENSMUST00000126611.8, ENSMUST00000140943.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TACACATTTTCTAAGGGCCCTTGCTTCATATCCTGGCCCCTGAGATaGATGGCCTCGTACTCCACATCACTCCCAAGCGGCAGACTTGTT | + |
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Preference number: 2 (lower is better) Translates to: YTFSKGPCFISWPLR*MASYSTSLPSGRLV Trigger: AACAAGTCTGCCGCTTGGGAGTGATGTGGAGTACGAGGCCATCAATCTCAGGGGCCAGGATATGAAGCAAGGGCCCTTAGAAAATGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGTCTGTGACGGGTCTTaGGTCTCTTCTTTTAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SCGGGRTQKDLQSNHPEAVCDGS*VSSFRL Trigger: AAGCCTAAAAGAAGAGACCCAAGACCCGTCACAGAC...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTTGCCAGCTGTGGAGGTaGAAGGACACAGAAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: KDLQSNHPEAEALVLFLTCQLWR*KDTEGS Trigger: AGATCCTTCTGTGTCCTTCCACCTCCACAGCTGGCA...AGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| 3UTR GCA 72 bp | ACATCACTCCCAAGCGGCAGACTTGTTCTCCCATCCTaGAGGTTCAGCTGGTCTGTGACGGGTCTTGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: TSLPSGRLVLPS*RFSWSVTGLGS Trigger: AGACCCAAGACCCGTCACAGACCAGCTGAACCTGCAGGATGGGAGAACAAGTCTGCCGCTTGGGAGTGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| 3UTR CCA 72 bp | AGCGGCAGACTTGTTCTCCCATCCTGCAGGTTCAGCTaGTCTGTGACGGGTCTTGGGTCTCTTCTTTTAGGC | + |
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Preference number: 3 (lower is better) Translates to: SGRLVLPSCRFS*SVTGLGSLLLG Trigger: GCCTAAAAGAAGAGACCCAAGACCCGTCACAGACCAGCTGAACCTGCAGGATGGGAGAACAAGTCTGCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| 3UTR GCA 72 bp | CTGCCAGCTGTGGAGGTGGAAGGACACAGAAGGATCTaGAATCAAACCATCCTGAAGCAGAAGCCTTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: LPAVEVEGHRRI*NQTILKQKPWY Trigger: GTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| 3UTR GCA 72 bp | TCCTTGATGCTTTCATACACATTTTCTAAGGGCCCTTaGTTCATATCCTGGCCCCTGAGATTGATGGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: SLMLSYTFSKGP*FISWPLRLMAS Trigger: CGAGGCCATCAATCTCAGGGGCCAGGATATGAAGCAAGGGCCCTTAGAAAATGTGTATGAAAGCATCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| 3UTR CCA 72 bp | TCATACACATTTTCTAAGGGCCCTTGCTTCATATCCTaGCCCCTGAGATTGATGGCCTCGTACTCCACATCA | + |
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Preference number: 3 (lower is better) Translates to: SYTFSKGPCFIS*PLRLMASYSTS Trigger: TGATGTGGAGTACGAGGCCATCAATCTCAGGGGCCAGGATATGAAGCAAGGGCCCTTAGAAAATGTGTATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| CDS-3UTR GCA 90 bp | TGGCCTCGTACTCCACATCACTCCCAAGCGGCAGACTTGTTCTCCCATCCTGCAGAGCGTGGGCCTCGGTaGAGCTCATGCAGTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: WPRTPHHSQAADLFSHPAERGPR*SSCSLV Trigger: CACCAGACTGCATGAGCTGCACCGAGGCCCACGCTC...TGCAGGATGGGAGAACAAGTCTGCCGCTTGGGAGTGATGTGGAGTACGAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| CDS-3UTR CCA 90 bp | GGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCCAGCAGGAGGGGCCCTaGGCAGCTGCCGTGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GGGRTQKDLQSNHPEAEAQQEGP*AAAVVG Trigger: TCCCACCACGGCAGCTGCCCAGGGCCCCTCCTGCTG...GGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | GTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGGGGGCCCTGGGCAGCTaGCGTGGTGGGAAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VEVEGHRRICNQTILKQKGALGS*RGGKAE Trigger: CTCTGCCTTCCCACCACGGCAGCTGCCCAGGGCCCC...CTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGGGGCCCTGGGCAGCTaGCGTGGTGGGAAGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SCGGGRTQKDLQSNHPEAGALGS*RGGKAE Trigger: CTCTGCCTTCCCACCACGGCAGCTGCCCAGGGCCCC...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACCAGCAGGAGGGGCCCTaGGCAGCTGCCGTGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: EGHRRICNQTILKQKPWYQQEGP*AAAVVG Trigger: TCCCACCACGGCAGCTGCCCAGGGCCCCTCCTGCTG...GTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR TCA 90 bp | GGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCGCAGAGTTGGGTACCTaGGACCTGGTGCTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GGGRTQKDLQSNHPEAEAAELGT*DLVLPL Trigger: CAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGC...GGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | TGGCCTCGTACTCCACATCACTCCCAAGCGGCAGACTTGTTCTCCCATCCTGCACCTCGGTGCAGCTCATaGAGTCTGGTGTCAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: WPRTPHHSQAADLFSHPAPRCSS*SLVSDL Trigger: CAAGTCTGACACCAGACTGCATGAGCTGCACCGAGG...TGCAGGATGGGAGAACAAGTCTGCCGCTTGGGAGTGATGTGGAGTACGAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| CDS-3UTR GCA 90 bp | GGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCGAGCGTGGGCCTCGGTaGAGCTCATGCAGTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GGGRTQKDLQSNHPEAEAERGPR*SSCSLV Trigger: CACCAGACTGCATGAGCTGCACCGAGGCCCACGCTC...GGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTCAGCCAGGCTGGCCCTaGGAATTGCAGCCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: EVEGHRRICNQTILKQKPQPGWP*ELQPAP Trigger: TGGGGCTGGCTGCAATTCCCAGGGCCAGCCTGGCTG...AGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| 3UTR CAA 72 bp | TCTAAGGGCCCTTGCTTCATATCCTGGCCCCTGAGATaGATGGCCTCGTACTCCACATCACTCCCAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKGPCFISWPLR*MASYSTSLPSG Trigger: GCCGCTTGGGAGTGATGTGGAGTACGAGGCCATCAATCTCAGGGGCCAGGATATGAAGCAAGGGCCCTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| CDS-3UTR TCA 90 bp | GGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGCAGAGTTGGGTACCTaGGACCTGGTGCTGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GGRTQKDLQSNHPEAEALAELGT*DLVLPL Trigger: CAGGGGCAGCACCAGGTCTCAGGTACCCAACTCTGC...CAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | GGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCGCTGGCCCTGGGAATTaGAGCCAGCCCCACATTGGA | + |
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Preference number: 4 (lower is better) Translates to: GGGRTQKDLQSNHPEAEAAGPGN*SQPHIG Trigger: TCCAATGTGGGGCTGGCTGCAATTCCCAGGGCCAGC...GGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGCTGGCCCTGGGAATTaGAGCCAGCCCCACATTGGA | + |
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Preference number: 4 (lower is better) Translates to: SCGGGRTQKDLQSNHPEAAGPGN*SQPHIG Trigger: TCCAATGTGGGGCTGGCTGCAATTCCCAGGGCCAGC...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | ACTCCCAAGCGGCAGACTTGTTCTCCCATCCTGCAGGTTCAGCTGGTCTGTGACCAGTGGCATTTCCACTaGTACCAAACTGTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TPKRQTCSPILQVQLVCDQWHFH*YQTVLQ Trigger: CTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTG...GTCACAGACCAGCTGAACCTGCAGGATGGGAGAACAAGTCTGCCGCTTGGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTCTGAGGGAGCAGAGGTaGGTCTGTCTCAGCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EVEGHRRICNQTILKQKPLREQR*VCLSSG Trigger: GCCACTGCTGAGACAGACCCACCTCTGCTCCCTCAG...AGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGACCTGGTGCTGCCCCTaGACATCTCTAGCCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: GGRTQKDLQSNHPEAEALTWCCP*TSLASV Trigger: CACGCTGGCTAGAGATGTCCAGGGGCAGCACCAGGT...CAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTACCTGGTGCTGCCCCTaGACATCTCTAGCCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: EVEGHRRICNQTILKQKPTWCCP*TSLASV Trigger: CACGCTGGCTAGAGATGTCCAGGGGCAGCACCAGGT...AGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | GAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACCCTGAGACCTGGTGCTaGCCCTGGACATCTCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: EGHRRICNQTILKQKPWYPETWC*PWTSLA Trigger: GGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGG...GTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | TGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAACTGAGGGAGCAGAGGTaGGTCTGTCTCAGCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: CGGGRTQKDLQSNHPEAELREQR*VCLSSG Trigger: GCCACTGCTGAGACAGACCCACCTCTGCTCCCTCAG...TTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTGGGAAGGCAGAGTTaGGTACCTGAGACCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GGRTQKDLQSNHPEAEALVGRQS*VPETWC Trigger: GCACCAGGTCTCAGGTACCCAACTCTGCCTTCCCAC...CAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATCAGCCAGGCTGGCCCTaGGAATTGCAGCCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: DLQSNHPEAEALVLFLTHQPGWP*ELQPAP Trigger: TGGGGCTGGCTGCAATTCCCAGGGCCAGCCTGGCTG...ATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCACCTCGGTGCAGCTCATaGAGTCTGGTGTCAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: SCGGGRTQKDLQSNHPEAPRCSS*SLVSDL Trigger: CAAGTCTGACACCAGACTGCATGAGCTGCACCGAGG...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | ACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCCTGAGACCTGGTGCTaGCCCTGGACATCTCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: TQKDLQSNHPEAEALVLFPETWC*PWTSLA Trigger: GGCTAGAGATGTCCAGGGGCAGCACCAGGTCTCAGG...GAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | GTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGGTACCTGAGACCTGGTaGTGCCCCTGGACATCTCTA | + |
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Preference number: 4 (lower is better) Translates to: VEVEGHRRICNQTILKQKVPETW*CPWTSL Trigger: TAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTAC...CTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACGTGGGAAGGCAGAGTTaGGTACCTGAGACCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: EGHRRICNQTILKQKPWYVGRQS*VPETWC Trigger: GCACCAGGTCTCAGGTACCCAACTCTGCCTTCCCAC...GTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCAGCCAGCCCCACATTaGAATAAGTGGCCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VEVEGHRRICNQTILKQKQPAPH*NKWPQS Trigger: GCTCTGAGGCCACTTATTCCAATGTGGGGCTGGCTG...CTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCCAGTGGCATTTCCACTaGTACCAAACTGTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGGRTQKDLQSNHPEAEAQWHFH*YQTVLQ Trigger: CTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTG...GGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | AAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCTGAGGGAGCAGAGGTaGGTCTGTCTCAGCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KDLQSNHPEAEALVLFLTLREQR*VCLSSG Trigger: GCCACTGCTGAGACAGACCCACCTCTGCTCCCTCAG...AGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGTCCCTTTGTGCTTCTaGATGCAGGCATATTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SCGGGRTQKDLQSNHPEAVPLCF*MQAYSA Trigger: GGCCGAATATGCCTGCATCCAGAAGCACAAAGGGAC...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGGTCCCTTTGTGCTTCTaGATGCAGGCATATTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VEVEGHRRICNQTILKQKVPLCF*MQAYSA Trigger: GGCCGAATATGCCTGCATCCAGAAGCACAAAGGGAC...CTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | ACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCCTCGGTGCAGCTCATaGAGTCTGGTGTCAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: TQKDLQSNHPEAEALVLFPRCSS*SLVSDL Trigger: CAAGTCTGACACCAGACTGCATGAGCTGCACCGAGG...GAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | CTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATGTTAGTAGAAGGTGCAGTTaGAGGAGCAGCAGGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LQSNHPEAEALVLFLTHVSRRCS*RSSRRG Trigger: GCCCCTCCTGCTGCTCCTGCAACTGCACCTTCTACT...AACATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | GGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTGCTCTGTCCCTTTGTaGTTCTGGATGCAGGCATAT | + |
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Preference number: 4 (lower is better) Translates to: GGGRTQKDLQSNHPEAEACSVPL*FWMQAY Trigger: ATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCA...GGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | GTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGACCTTAGCCTTCTGCTaGAATTCTTGGCAGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VEVEGHRRICNQTILKQKTLAFC*NSWQPC Trigger: GCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGT...CTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | GGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCATCACCTTAGCCTTCTaGTGCAATTCTTGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GGGRTQKDLQSNHPEAEAITLAF*CNSWQP Trigger: AGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGAT...GGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTCAGTGGCATTTCCACTaGTACCAAACTGTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: EVEGHRRICNQTILKQKPQWHFH*YQTVLQ Trigger: CTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTG...AGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | ACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCAGCCAGCCCCACATTaGAATAAGTGGCCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TQKDLQSNHPEAEALVLFQPAPH*NKWPQS Trigger: GCTCTGAGGCCACTTATTCCAATGTGGGGCTGGCTG...GAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGTTCTGCTGCAATTCTTaGCAGCCTTGCTCTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GGRTQKDLQSNHPEAEALFCCNS*QPCSVP Trigger: AGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAA...CAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | CTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATGTTGTACCTGAGACCTGGTaGTGCCCCTGGACATCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LQSNHPEAEALVLFLTHVVPETW*CPWTSL Trigger: TAGAGATGTCCAGGGGCAGCACCAGGTCTCAGGTAC...AACATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | TGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAACCTTAGCCTTCTGCTaGAATTCTTGGCAGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CGGGRTQKDLQSNHPEAETLAFC*NSWQPC Trigger: GCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGT...TTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAATCACCTTAGCCTTCTaGTGCAATTCTTGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SCGGGRTQKDLQSNHPEAITLAF*CNSWQP Trigger: AGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGAT...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTGTCTGTGACGGGTCTTaGGTCTCTTCTTTTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: EVEGHRRICNQTILKQKPVCDGS*VSSFRL Trigger: AAGCCTAAAAGAAGAGACCCAAGACCCGTCACAGAC...AGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR GCA 90 bp | TGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAATGCTCTGTCCCTTTGTaGTTCTGGATGCAGGCATAT | + |
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Preference number: 4 (lower is better) Translates to: CGGGRTQKDLQSNHPEAECSVPL*FWMQAY Trigger: ATATGCCTGCATCCAGAAGCACAAAGGGACAGAGCA...TTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | ACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCGTCCATCTGAGTAGCTaGGATCACCTTAGCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TQKDLQSNHPEAEALVLFVHLSS*DHLSLL Trigger: CAGAAGGCTAAGGTGATCCCAGCTACTCAGATGGAC...GAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | GAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACGTCTGTGACGGGTCTTaGGTCTCTTCTTTTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: EGHRRICNQTILKQKPWYVCDGS*VSSFRL Trigger: AAGCCTAAAAGAAGAGACCCAAGACCCGTCACAGAC...GTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | AAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTGGTCTGTCTCAGCAGTaGCATTTCCACTGGTACCAA | + |
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Preference number: 4 (lower is better) Translates to: KDLQSNHPEAEALVLFLTGLSQQ*HFHWYQ Trigger: TTGGTACCAGTGGAAATGCCACTGCTGAGACAGACC...AGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | CTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATGTTGGTCTGTCTCAGCAGTaGCATTTCCACTGGTACCAA | + |
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Preference number: 4 (lower is better) Translates to: LQSNHPEAEALVLFLTHVGLSQQ*HFHWYQ Trigger: TTGGTACCAGTGGAAATGCCACTGCTGAGACAGACC...AACATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | CTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATGTTTTCTGCTGCAATTCTTaGCAGCCTTGCTCTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LQSNHPEAEALVLFLTHVFCCNS*QPCSVP Trigger: AGGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAA...AACATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CCA 90 bp | TCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATGTTAAAGACGTCCATCTGAGTAGCTaGGATCACCTTAGCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SNHPEAEALVLFLTHVKDVHLSS*DHLSLL Trigger: CAGAAGGCTAAGGTGATCCCAGCTACTCAGATGGAC...GTCTTTAACATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS GCA 90 bp | TCTGAGCTCTCTTCCGGCCAGTGTTCCGGGTTAGGGCCTCCTGGATaGCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCTCCTCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: SELSSGQCSGLGPPG*PGCPVGSAQSSPQS Trigger: AGACTGAGGAGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGGCCGGAAGAGAGCTCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140943.8 |
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| CDS GCA 90 bp | ATAGGACGTCCATCTATGCTGGAGCGTGGGCCTCGGTGCAGCTCATaGAGTCTGGTGTCAGACTTGCTGAGGGAGCAGAGGTGGGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: IGRPSMLERGPRCSS*SLVSDLLREQRWVC Trigger: ACAGACCCACCTCTGCTCCCTCAGCAAGTCTGACACCAGACTGCATGAGCTGCACCGAGGCCCACGCTCCAGCATAGATGGACGTCCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| CDS TCA 90 bp | ATTTCCACTGGTACCAAACTGTCCTGCAGCCCAGTTTGCTGCCTCTaGGCTCTCTTCCGAGGCCACCGGGGATTTGCTGCTTGGCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: ISTGTKLSCSPVCCL*ALFRGHRGFAAWPC Trigger: ACAGGGCCAAGCAGCAAATCCCCGGTGGCCTCGGAAGAGAGCTCAGAGGCAGCAAACTGGGCTGCAGGACAGTTTGGTACCAGTGGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGTCCTGCAGCCCAGTTaGCTGCCTCTGAGCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SCGGGRTQKDLQSNHPEAVLQPS*LPLSSL Trigger: AAGAGAGCTCAGAGGCAGCAAACTGGGCTGCAGGAC...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCATCCCAAGCGGCAGACTaGTTCTCCCATCCTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: SCGGGRTQKDLQSNHPEASQAAD*FSHPAG Trigger: ACCTGCAGGATGGGAGAACAAGTCTGCCGCTTGGGA...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | GTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTCCCAAGCGGCAGACTaGTTCTCCCATCCTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VEGHRRICNQTILKQKPWSQAAD*FSHPAG Trigger: ACCTGCAGGATGGGAGAACAAGTCTGCCGCTTGGGA...CCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | AGCTGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCACCTTGCTCTGTCCCTTaGTGCTTCTGGATGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SCGGGRTQKDLQSNHPEAPCSVP*CFWMQA Trigger: TGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGG...TGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | GAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTCTTCTGCTGCAATTCTaGGCAGCCTTGCTCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: EVEGHRRICNQTILKQKPLLLQF*AALLCP Trigger: GGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAG...AGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | GGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCCAATTCTTGGCAGCCTaGCTCTGTCCCTTTGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: GGGRTQKDLQSNHPEAEAQFLAA*LCPFVL Trigger: AAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTG...GGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | TGTGGAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAACTTCTGCTGCAATTCTaGGCAGCCTTGCTCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: CGGGRTQKDLQSNHPEAELLLQF*AALLCP Trigger: GGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAG...TTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | GATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATGTCCTGCAGCCCAGTTaGCTGCCTCTGAGCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: DLQSNHPEAEALVLFLTHVLQPS*LPLSSL Trigger: AAGAGAGCTCAGAGGCAGCAAACTGGGCTGCAGGAC...ATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | AAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTGTCCTGCAGCCCAGTTaGCTGCCTCTGAGCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: KDLQSNHPEAEALVLFLTVLQPS*LPLSSL Trigger: AAGAGAGCTCAGAGGCAGCAAACTGGGCTGCAGGAC...AGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048077.12 ENSMUST00000108804.3 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | GATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATTCCTGGCCCCTGAGATaGATGGCCTCGTACTCCACA | + |
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Preference number: 5 (lower is better) Translates to: DLQSNHPEAEALVLFLTHSWPLR*MASYST Trigger: TGTGGAGTACGAGGCCATCAATCTCAGGGGCCAGGA...ATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | GATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATCCTTGCTCTGTCCCTTaGTGCTTCTGGATGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: DLQSNHPEAEALVLFLTHPCSVP*CFWMQA Trigger: TGCCTGCATCCAGAAGCACAAAGGGACAGAGCAAGG...ATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | TCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATGTTAAAGACTCCTGGCCCCTGAGATaGATGGCCTCGTACTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SNHPEAEALVLFLTHVKDSWPLR*MASYST Trigger: TGTGGAGTACGAGGCCATCAATCTCAGGGGCCAGGA...GTCTTTAACATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | CTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCCTAACTCATGTTCAATTCTTGGCAGCCTaGCTCTGTCCCTTTGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LQSNHPEAEALVLFLTHVQFLAA*LCPFVL Trigger: AAGCACAAAGGGACAGAGCAAGGCTGCCAAGAATTG...AACATGAGTTAGGAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | GAGGTGGAAGGACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTCTCTTCTTTTAGGCTaGCAAACCCTAGAGTATAGG | + |
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Preference number: 5 (lower is better) Translates to: EVEGHRRICNQTILKQKPSLLLG*QTLEYR Trigger: CCTATACTCTAGGGTTTGCAAGCCTAAAAGAAGAGA...AGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGTCCTTCCACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS-3UTR CAA 90 bp | ACACAGAAGGATCTGCAATCAAACCATCCTGAAGCAGAAGCCTTGGTACTCTTCTCTCTTCTTTTAGGCTaGCAAACCCTAGAGTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQKDLQSNHPEAEALVLFSLLLG*QTLEYR Trigger: CCTATACTCTAGGGTTTGCAAGCCTAAAAGAAGAGA...GAAGAGTACCAAGGCTTCTGCTTCAGGATGGTTTGATTGCAGATCCTTCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048077.12 ENSMUST00000126611.8 |
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| CDS GCA 72 bp | TCTTCCGGCCAGTGTTCCGGGTTAGGGCCTCCTGGATaGCCCGGATGTCCCGTTGGGTCCGCTCAATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSGQCSGLGPPG*PGCPVGSAQSS Trigger: AGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCGGAACACTGGCCGGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140943.8 |
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| CDS CCA 72 bp | CGGGTTAGGGCCTCCTGGATGCCCCGGATGTCCCGTTaGGTCCGCTCAATCTTCTCCTCAGTCTGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RVRASWMPRMSR*VRSIFSSVWKS Trigger: GCTCTTCCAGACTGAGGAGAAGATTGAGCGGACCCAACGGGACATCCGGGGCATCCAGGAGGCCCTAACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140943.8 |
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| CDS TCA 72 bp | GGTACCAAACTGTCCTGCAGCCCAGTTTGCTGCCTCTaGGCTCTCTTCCGGCCAGTGTTCCGGGTTAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GTKLSCSPVCCL*ALFRPVFRVRA Trigger: GGCCCTAACCCGGAACACTGGCCGGAAGAGAGCTCAGAGGCAGCAAACTGGGCTGCAGGACAGTTTGGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140943.8 |
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| CDS TCA 72 bp | GGTACCAAACTGTCCTGCAGCCCAGTTTGCTGCCTCTaGGCTCTCTTCCGAGGCCACCGGGGATTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTKLSCSPVCCL*ALFRGHRGFAA Trigger: AGCAGCAAATCCCCGGTGGCCTCGGAAGAGAGCTCAGAGGCAGCAAACTGGGCTGCAGGACAGTTTGGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126611.8 |
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| CDS CAA 90 bp | CAGCAGTGGCATTTCCACTGGTACCAAACTGTCCTGCAGCCCAGTTaGCTGCCTCTGAGCTCTCTTCCGAGGCCACCGGGGATTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QQWHFHWYQTVLQPS*LPLSSLPRPPGICC Trigger: GCAGCAAATCCCCGGTGGCCTCGGAAGAGAGCTCAGAGGCAGCAAACTGGGCTGCAGGACAGTTTGGTACCAGTGGAAATGCCACTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126611.8 |
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| CDS GCA 72 bp | ATAGGACGTCCATCTATGCTGGAGCGTGGGCCTCGGTaGAGCTCATGCAGTCTGGTGTCAGACTTGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IGRPSMLERGPR*SSCSLVSDLLR Trigger: CCTCAGCAAGTCTGACACCAGACTGCATGAGCTGCACCGAGGCCCACGCTCCAGCATAGATGGACGTCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108804.3 |
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| CDS CAA 72 bp | CATTTCCACTGGTACCAAACTGTCCTGCAGCCCAGTTaGCTGCCTCTGAGCTCTCTTCCGGCCAGTGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HFHWYQTVLQPS*LPLSSLPASVP Trigger: CGGAACACTGGCCGGAAGAGAGCTCAGAGGCAGCAAACTGGGCTGCAGGACAGTTTGGTACCAGTGGAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140943.8 |
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