Pregenerated sensors for LIMD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025239Ensembl transcript IDs: ENSMUST00000026269.4, ENSMUST00000217639.2
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCATGGACGAGAAGCCTGGCGCCTGCACCAGTTCTCTCTGAGCTaGCTGCATAGGACAGGGCAAGCCTCTGCCCCAACCCCACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: KHGREAWRLHQFSLS*LHRTGQASAPTPLS Trigger: AGACAGTGGGGTTGGGGCAGAGGCTTGCCCTGTCCTATGCAGCCAGCTCAGAGAGAACTGGTGCAGGCGCCAGGCTTCTCGTCCATGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR GCA 90 bp | CAAGCCAGCTGCTGGGTACCCAGCCTGACTGCTGAAGTAAGACACTaGAGCCTTCCTGCCACAAGTCACGGGACACTCCCTGAAGATAAG | + |
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Preference number: 1 (lower is better) Translates to: QASCWVPSLTAEVRH*SLPATSHGTLPEDK Trigger: CTTATCTTCAGGGAGTGTCCCGTGACTTGTGGCAGGAAGGCTGCAGTGTCTTACTTCAGCAGTCAGGCTGGGTACCCAGCAGCTGGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 90 bp | GGCAGAGGCACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTaGCTCTCCTTCACCAAGCAAACTCCAATGTACAAAGCATATGCA | + |
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Preference number: 1 (lower is better) Translates to: GRGTAGRPSLPDVQA*LSFTKQTPMYKAYA Trigger: TGCATATGCTTTGTACATTGGAGTTTGCTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGTGCCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR GCA 90 bp | TGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTaGTCACCTCTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGT | + |
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Preference number: 1 (lower is better) Translates to: CVRVIRVQVLAQRKC*SPLSRFLFRDTVEC Trigger: ACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR GCA 90 bp | CCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTaGCACCCTTGCCAAAGCCAGCCCGGGAAACCAAAGAGAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: PEPPGRQRHCVFSFP*HPCQSQPGKPKREN Trigger: GTTTTCTCTCTTTGGTTTCCCGGGCTGGCTTTGGCAAGGGTGGCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 90 bp | GAGTGTGGCAATAGAGAAAAGCACTTTGAAAACACATGGACTGGATaGGGAGTGCACACTGCTGCGGTTAGAAGGAAGATACCCTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: ECGNREKHFENTWTG*GVHTAAVRRKIPSS Trigger: TGAAGAGGGTATCTTCCTTCTAACCGCAGCAGTGTGCACTCCCCATCCAGTCCATGTGTTTTCAAAGTGCTTTTCTCTATTGCCACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR TCA 90 bp | CAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTaGAAACCTGCTTTCCAGGGACTAGGATGTGTCCAGTCACAAAAG | + |
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Preference number: 1 (lower is better) Translates to: QGFSLGTLWNVLNTT*KPAFQGLGCVQSQK Trigger: CTTTTGTGACTGGACACATCCTAGTCCCTGGAAAGCAGGTTTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 90 bp | GTTGGAAAACGGCCACTGCTGATACACCAACAGTCTCCAATAGGATaGATGAATTCCTCTTTGATCTGTGATTTGGTGAAAACTATCTGT | + |
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Preference number: 1 (lower is better) Translates to: VGKRPLLIHQQSPIG*MNSSLICDLVKTIC Trigger: ACAGATAGTTTTCACCAAATCACAGATCAAAGAGGAATTCATCCATCCTATTGGAGACTGTTGGTGTATCAGCAGTGGCCGTTTTCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGGTGTCAGGGGCCACGTaGAAGCTGGAGCATCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: ELYRPCFTTQASCWVPSLVSGAT*KLEHLP Trigger: AGGAAGATGCTCCAGCTTGCACGTGGCCCCTGACAC...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CAA 90 bp | CTAGTCAAGAGTCCACATTCACATGTGGCAGGAGCTCTACCGGCCTaGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGACTGC | + |
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Preference number: 2 (lower is better) Translates to: LVKSPHSHVAGALPA*LHHPSQLLGTQPDC Trigger: GCAGTCAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTCCTGCCACATGTGAATGTGGACTCTTGACTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGGCCAGAGTGAACTCATaGCTTCAGTTGCAGCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: ELYRPCFTTQASCWVPSLARVNS*LQLQLV Trigger: GACTAGCTGCAACTGAAGTCATGAGTTCACTCTGGC...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGAGCAAATGTCTGTGCTaGGAAGAGGACCAGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: ELYRPCFTTQASCWVPSLSKCLC*EEDQRD Trigger: ATCTCTCTGGTCCTCTTCTCAGCACAGACATTTGCT...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCACCTGTGCCCCAGCTGTaGGGGAGCTCAGAAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: EEAMKTQHQAWTRSLAPAPVPQL*GSSEVL Trigger: TAGCACTTCTGAGCTCCCCCACAGCTGGGGCACAGG...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGCCAGTTTTACCCATTTaGACTTCCAAGGAGACACTG | + |
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Preference number: 2 (lower is better) Translates to: ELYRPCFTTQASCWVPSLPVLPI*TSKETL Trigger: CAGTGTCTCCTTGGAAGTTCAAATGGGTAAAACTGG...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGGTGTTGCGACTGTACTaGTTAGCTGTAGTTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: ELYRPCFTTQASCWVPSLVLRLY*LAVVQE Trigger: CTCTTGAACTACAGCTAAGCAGTACAGTCGCAACAC...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGGGTGAAAACTATCTGTaGGGTATGTTTTGTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ELYRPCFTTQASCWVPSLGENYL*GMFCVW Trigger: CCACACACAAAACATACCTCACAGATAGTTTTCACC...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR GCA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGGGACACTGTGGAATGTaGTCAACACAACCTGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: HGLCEGYPGAGARPEEVLGHCGM*STQPEN Trigger: GTTTTCAGGTTGTGTTGAGCACATTCCACAGTGTCC...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCAAACACATGGACTGGATaGGGAGTGCACACTGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: EEAMKTQHQAWTRSLAPANTWTG*GVHTAA Trigger: CGCAGCAGTGTGCACTCCCCATCCAGTCCATGTGTT...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CAA 90 bp | AGGCAGAGGCACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTaGGCTCTCCTTCACCAAGCAAACTCCAATGTACAAAGCATATGC | + |
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Preference number: 2 (lower is better) Translates to: RQRHSRETQPPRCPS*ALLHQANSNVQSIC Trigger: GCATATGCTTTGTACATTGGAGTTTGCTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGTGCCTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR TCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCACACCATGGGCTGTGTaGGGGTTATCCGGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCTPWAV*GLSGCR Trigger: CCTGCACCCGGATAACCCTCACACAGCCCATGGTGT...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGATGCAGTCAAGTGTTTaGAGTATTCTCAGAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: ELYRPCFTTQASCWVPSLMQSSV*SILRRA Trigger: AGCTCTTCTGAGAATACTTCAAACACTTGACTGCAT...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGGGTATGTTTTGTGTGTaGGAAAAGGTAGAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: ELYRPCFTTQASCWVPSLGMFCV*EKVERK Trigger: CTTTCTCTCTACCTTTTCCCACACACAAAACATACC...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR GCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCAGGAACTTGACCTCCTaGCCCTCCTCTTCCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCRNLTS*PSSSCA Trigger: GGCACAGGAAGAGGAGGGGCAGGAGGTCAAGTTCCT...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CAA 90 bp | GACACAAAATTAGACTCTACCAGAGCCTCCAGGAAGGCAAAGACATaGTGTTTTCTCCTTTCCCTGCCACCCTTGCCAAAGCCAGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: DTKLDSTRASRKAKT*CFLLSLPPLPKPAR Trigger: CCGGGCTGGCTTTGGCAAGGGTGGCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGTCTAATTTTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCGAGAGAAAACAGCGCTaGTCTCAGGGTCTATCTCGG | + |
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Preference number: 2 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCERKQR*SQGLSR Trigger: CCGAGATAGACCCTGAGACCAGCGCTGTTTTCTCTC...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CAA 90 bp | CTGCTGATACACCAACAGTCTCCAATAGGATGGATGAATTCCTCTTaGATCTGTGATTTGGTGAAAACTATCTGTGAGGTATGTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLIHQQSPIGWMNSS*ICDLVKTICEVCFV Trigger: CACAAAACATACCTCACAGATAGTTTTCACCAAATCACAGATCAAAGAGGAATTCATCCATCCTATTGGAGACTGTTGGTGTATCAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 72 bp | CGAGAAGCCTGGCGCCTGCACCAGTTCTCTCTGAGCTaGCTGCATAGGACAGGGCAAGCCTCTGCCCCAACC | + |
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Preference number: 3 (lower is better) Translates to: REAWRLHQFSLS*LHRTGQASAPT Trigger: GGTTGGGGCAGAGGCTTGCCCTGTCCTATGCAGCCAGCTCAGAGAGAACTGGTGCAGGCGCCAGGCTTCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR GCA 72 bp | TGCTGGGTACCCAGCCTGACTGCTGAAGTAAGACACTaGAGCCTTCCTGCCACAAGTCACGGGACACTCCCT | + |
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Preference number: 3 (lower is better) Translates to: CWVPSLTAEVRH*SLPATSHGTLP Trigger: AGGGAGTGTCCCGTGACTTGTGGCAGGAAGGCTGCAGTGTCTTACTTCAGCAGTCAGGCTGGGTACCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR GCA 72 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTaGTGCTCACCTCTATCAAGGTTTCTCTTTAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: RVIRVQVLAQRK*CSPLSRFLFRD Trigger: GTCCCTAAAGAGAAACCTTGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR GCA 72 bp | GTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTaGTCACCTCTATCAAGGTTTCTCTTTAGGGACACT | + |
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Preference number: 3 (lower is better) Translates to: VIRVQVLAQRKC*SPLSRFLFRDT Trigger: AGTGTCCCTAAAGAGAAACCTTGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR GCA 72 bp | CCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTaGCACCCTTGCCAAAGCCAGCCCGGGAAACCAAAG | + |
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Preference number: 3 (lower is better) Translates to: PGRQRHCVFSFP*HPCQSQPGKPK Trigger: CTTTGGTTTCCCGGGCTGGCTTTGGCAAGGGTGGCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 72 bp | AGACTGGAGGAAGCAATGAAAACACAGCACCAAGCATaGACGAGAAGCCTGGCGCCTGCACCAGTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: RLEEAMKTQHQA*TRSLAPAPVLS Trigger: AGAGAGAACTGGTGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTCCAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR CAA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGTGGATGAATTCCTCTTaGATCTGTGATTTGGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: ELYRPCFTTQASCWVPSLWMNSS*ICDLVK Trigger: TTTCACCAAATCACAGATCAAAGAGGAATTCATCCA...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR TCA 72 bp | TCAGGGGCCACGTGCAAGCTGGAGCATCTTCCTGAGTaGTTCAGCGAGAGTGTGGCAATAGAGAAAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: SGATCKLEHLPE*FSESVAIEKST Trigger: AGTGCTTTTCTCTATTGCCACACTCTCGCTGAATCACTCAGGAAGATGCTCCAGCTTGCACGTGGCCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 72 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTaGCTCTCCTTCACCAAGCAAACTCCAATGTACAAA | + |
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Preference number: 3 (lower is better) Translates to: TAGRPSLPDVQA*LSFTKQTPMYK Trigger: TTTGTACATTGGAGTTTGCTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR GCA 72 bp | CAAAGACATTGTGTTTTCTCCTTTCCCTGCCACCCTTaGCAAAGCCAGCCCGGGAAACCAAAGAGAGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: QRHCVFSFPCHP*QSQPGKPKREN Trigger: GTTTTCTCTCTTTGGTTTCCCGGGCTGGCTTTGGCAAGGGTGGCAGGGAAAGGAGAAAACACAATGTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 72 bp | GGGGGCCTCTGTCTAGAACAGGAAACGAGTAACATCTaGCCAAAGGATCCCAACAGAAGGAACCTGATAAAA | + |
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Preference number: 3 (lower is better) Translates to: GGLCLEQETSNI*PKDPNRRNLIK Trigger: TTTTATCAGGTTCCTTCTGTTGGGATCCTTTGGCCAGATGTTACTCGTTTCCTGTTCTAGACAGAGGCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR TCA 72 bp | GGATATGGACTGGGATTCCCAACGGTCATGTTCAAATaGGTTGAACAAGGTGACAGGGATATGAGGAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GYGLGFPTVMFK*VEQGDRDMRKP Trigger: AGGCTTCCTCATATCCCTGTCACCTTGTTCAACTCATTTGAACATGACCGTTGGGAATCCCAGTCCATATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR CAA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCAATGCAGTCAAGTGTTaGAAGTATTCTCAGAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCNAVKC*KYSQKS Trigger: GCTCTTCTGAGAATACTTCAAACACTTGACTGCATT...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 72 bp | AATAGAGAAAAGCACTTTGAAAACACATGGACTGGATaGGGAGTGCACACTGCTGCGGTTAGAAGGAAGATA | + |
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Preference number: 3 (lower is better) Translates to: NREKHFENTWTG*GVHTAAVRRKI Trigger: TATCTTCCTTCTAACCGCAGCAGTGTGCACTCCCCATCCAGTCCATGTGTTTTCAAAGTGCTTTTCTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 72 bp | TTCCTTTTAGAAGTAGCTCTCTCCCAGGATATGGACTaGGATTCCCAACGGTCATGTTCAAATGAGTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: FLLEVALSQDMD*DSQRSCSNELN Trigger: GTTCAACTCATTTGAACATGACCGTTGGGAATCCCAGTCCATATCCTGGGAGAGAGCTACTTCTAAAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CCA 72 bp | TTTACCCATTTGAACTTCCAAGGAGACACTGACCTCTaGCCTCGGGAAGTGATAGGCAAAGTTAATTATGTT | + |
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Preference number: 3 (lower is better) Translates to: FTHLNFQGDTDL*PREVIGKVNYV Trigger: AACATAATTAACTTTGCCTATCACTTCCCGAGGCCAGAGGTCAGTGTCTCCTTGGAAGTTCAAATGGGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR TCA 72 bp | TATATTAGTTTCCTCAAACCAAGCAAATGTCTGTGCTaGGAAGAGGACCAGAGAGATACAAGTCCGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: YISFLKPSKCLC*EEDQRDTSPLK Trigger: TTTCAGCGGACTTGTATCTCTCTGGTCCTCTTCTCAGCACAGACATTTGCTTGGTTTGAGGAAACTAATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR-3UTR CAA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAAATAGAGAAAAGCACTTaGAAAACACATGGACTGGAT | + |
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Preference number: 3 (lower is better) Translates to: LSRFLFRDTVECAQHNLKIEKST*KTHGLD Trigger: ATCCAGTCCATGTGTTTTCAAAGTGCTTTTCTCTAT...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGTTGCCGCTCGCACCCTaGCGGTTCCCACCGTTGACC | + |
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Preference number: 4 (lower is better) Translates to: ELYRPCFTTQASCWVPSLLPLAP*RFPPLT Trigger: GGTCAACGGTGGGAACCGTCAGGGTGCGAGCGGCAA...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCCTCTGCTCCTGAGATaGGTACGAGGGCTGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: HGLCEGYPGAGARPEEVLPLLLR*VRGLRG Trigger: GCCGCGCAGCCCTCGTACCCATCTCAGGAGCAGAGG...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGCCTCTGGCGGAAGGATaGGAAGGCCACAGGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: ELYRPCFTTQASCWVPSLPLAEG*EGHRLH Trigger: GTGCAGCCTGTGGCCTTCCCATCCTTCCGCCAGAGG...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGGGCTTCTCGCTGCTATaGCCACCAATGCCACCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELYRPCFTTQASCWVPSLGFSLL*PPMPPS Trigger: GGACGGTGGCATTGGTGGCCATAGCAGCGAGAAGCC...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGGGGGGTGGGACTCCCTaGGAGCACAGGTTCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: HGLCEGYPGAGARPEEVLGGGTP*EHRFQT Trigger: AGTCTGGAACCTGTGCTCCCAGGGAGTCCCACCCCC...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGCAGGTGGTCCTCCAGTaGATAGCAGCGGTGACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELYRPCFTTQASCWVPSLQVVLQ*IAAVTV Trigger: GACGGTCACCGCTGCTATCCACTGGAGGACCACCTG...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCCGAGGTTCACTCGCTaGGAGGAGGCAGTGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HGLCEGYPGAGARPEEVLPRFTR*EEAVDQ Trigger: TTGGTCCACTGCCTCCTCTCAGCGAGTGAACCTCGG...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGTCACCCTGGAGGGGGTaGGACTCCCTGGGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKSPWRG*DSLGAQ Trigger: CTGTGCTCCCAGGGAGTCCCACCCCCTCCAGGGTGA...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGCACAGGCTGCACACTTaGGGGCCAGCACCTTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ELYRPCFTTQASCWVPSLHRLHT*GPAPCD Trigger: ATCACAAGGTGCTGGCCCCCAAGTGTGCAGCCTGTG...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR GCA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGTCCTGTAGGAGCTGCTaGTGTTGCTGCTGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGLCEGYPGAGARPEEVLSCRSC*CCCCWR Trigger: CCTCCAGCAGCAGCAACAGCAGCAGCTCCTACAGGA...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGCTGAGAGGTAAGACTTaGGCCCATCCTGCAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELYRPCFTTQASCWVPSLLRGKT*AHPAAK Trigger: CTTGGCTGCAGGATGGGCCCAAGTCTTACCTCTCAG...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR TCA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGTTGACATGGCAGGAGTaGCAGAACAGGTGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HGLCEGYPGAGARPEEVLLTWQE*QNRWSS Trigger: GGAGGACCACCTGTTCTGTCACTCCTGCCATGTCAA...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGGTGGAGGGGTGCAGGTaGGGGTCCTTTCTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKVEGCR*GSFLQS Trigger: AGACTGGAGAAAGGACCCTCACCTGCACCCCTCCAC...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR GCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGAGCTGCTGCTGTTGCTaGTGCTGGAGGTGGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELYRPCFTTQASCWVPSLSCCCC*CWRWIL Trigger: CAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCT...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | GAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCTCCAGGTGCCACTGTTaGCACAGCCAGAGGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGYPGAGARPEEVLLTSISRCHC*HSQRRL Trigger: AAGCCTCCTCTGGCTGTGCCAACAGTGGCACCTGGA...GATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCACCCAGACTCACGCTaGGGCACCCTTCAGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HGLCEGYPGAGARPEEVLHPDSR*GTLQVY Trigger: ATAAACCTGAAGGGTGCCCCAGCGTGAGTCTGGGTG...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | GAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCGCTGAGAGGAGGCAGTaGACCAAAGGCCTGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGYPGAGARPEEVLLTSIAERRQ*TKGLLA Trigger: AGCCAACAGGCCTTTGGTCCACTGCCTCCTCTCAGC...GATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCATTCGGACAAGCTCCTTaGCTGGCGCTGCTAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSFGQAP*LALLGT Trigger: GGTCCCTAGCAGCGCCAGCCAAGGAGCTTGTCCGAA...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | GAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCTCTCGCTCCAGACGCTaGGTGAGGGCTTCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGYPGAGARPEEVLLTSISRSRR*VRASNF Trigger: GAAGTTGGAAGCCCTCACCCAGCGTCTGGAGCGAGA...GATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCAGGTAGAGATCTCCCATaGCCTGACAGGCCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSGRDLP*PDRPGQ Trigger: CTGGCCAGGCCTGTCAGGCCATGGGAGATCTCTACC...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CAA 72 bp | AGTCCACATTCACATGTGGCAGGAGCTCTACCGGCCTaGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPHSHVAGALPA*LHHPSQLLGTQ Trigger: CTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTCCTGCCACATGTGAATGTGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGGGTCTCCACAGGATTTaGGCAATGTGGAGTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELYRPCFTTQASCWVPSLGLHRI*AMWSHS Trigger: GGAATGACTCCACATTGCCCAAATCCTGTGGAGACC...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCGAAGTAGTCCGCTTTaGGGTGAGCATCCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGLCEGYPGAGARPEEVLRSSPL*GEHPSL Trigger: GAGAGATGGATGCTCACCCCAAAGCGGACTACTTCG...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGTCTGATGGTCTCGTCTaGACCCTCTGGCGGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKSDGLV*TLWRKD Trigger: ATCCTTCCGCCAGAGGGTTCAGACGAGACCATCAGA...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR TCA 90 bp | GAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCCCATGGACACAACTCTaGTGGTCTCGTCTGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGYPGAGARPEEVLLTSIPWTQL*WSRLNP Trigger: AGGGTTCAGACGAGACCATCAGAGTTGTGTCCATGG...GATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR GCA 90 bp | GAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCCAAATTCTGGGTTGTTaGCAGCACCCTTGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: EGYPGAGARPEEVLLTSIQILGC*QHPCPP Trigger: GGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTG...GATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR GCA 90 bp | GAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCGCTGGGTACTGTCCTTaGCAGCTGTCGAGGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: EGYPGAGARPEEVLLTSIAGYCP*QLSRIM Trigger: CATTATCCTCGACAGCTGGCAAGGACAGTACCCAGC...GATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCATGTAAAGCAGGTCTCTaGGAACTCACAGGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSCKAGL*ELTGPS Trigger: GGAGGGGCCTGTGAGTTCCCAGAGACCTGCTTTACA...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGTGTGGAGTCATTCCCTaGGCAACCAGGCCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKCGVIP*ATRPST Trigger: AGTGGATGGCCTGGTTGCCCAGGGAATGACTCCACA...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCACACTGTGGAGAGCTGTaGCTGGTAAGGGTGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSHCGEL*LVRVMV Trigger: GACCATCACCCTTACCAGCCACAGCTCTCCACAGTG...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGTGCCAGAGCACACTGTaGAGAGCTGTGGCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKCQSTL*RAVAGK Trigger: CTTACCAGCCACAGCTCTCCACAGTGTGCTCTGGCA...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGAATAGTCTCCGTGAGTaGGGCAGGAAGGGTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKNSLRE*GRKGLH Trigger: GTGAAGACCCTTCCTGCCTCACTCACGGAGACTATT...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGGACATTCATTACAGATaGCGCAGCGGAAACAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKDIHYR*RSGNSR Trigger: CCGGCTGTTTCCGCTGCGTCATCTGTAATGAATGTC...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGGCTGGAGGTGGATTTTaGCCATCTTGGTCGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKAGGGF*PSWSRT Trigger: TGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGC...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCATCACAGGCCCCTCCCTaGAACCACAGTTCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEAMKTQHQAWTRSLAPASQAPP*NHSSDC Trigger: GCAGTCAGAACTGTGGTTCCAGGGAGGGGCCTGTGA...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCACCAGACTACTGTCAGTaGACCAGCTGGGAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSPDYCQ*TSWENS Trigger: AGAGTTCTCCCAGCTGGTCCACTGACAGTAGTCTGG...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCACTTTCTCCAGTCTCTTaGCATGGCAGGAGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSLSPVS*HGRSDR Trigger: TCTGTCACTCCTGCCATGTCAAGAGACTGGAGAAAG...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR GCA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCAAGGAGCTGCTGCTGTTaGTGCTGCTGGAGGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EEAMKTQHQAWTRSLAPARSCCC*CCWRWI Trigger: AATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCCT...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR GCA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCACTGTTGGCTTCTCGCTaGTATGGCCACCAATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EEAMKTQHQAWTRSLAPALLASR*YGHQCH Trigger: GTGGCATTGGTGGCCATAGCAGCGAGAAGCCAACAG...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR GCA 90 bp | GAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCCAAACACCCCTTTGCTaGATTTCACACAGGAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGYPGAGARPEEVLLTSIQTPLC*ISHRNR Trigger: TCGGTTCCTGTGTGAAATGCAGCAAAGGGGTGTTTG...GATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR GCA 90 bp | GAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCCTCCAAACACCCCTTTaGTGCATTTCACACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGYPGAGARPEEVLLTSILQTPL*CISHRN Trigger: GTTCCTGTGTGAAATGCAGCAAAGGGGTGTTTGGAG...GATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGGGAAGAGCCCATCCTTaGAGGCCTCATACATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKGRAHP*RPHTCS Trigger: TGAACATGTATGAGGCCTCCAAGGATGGGCTCTTCC...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCAAGGATTTGGGCAATGTaGAGTCATTCCCTGGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSRIWAM*SHSLGN Trigger: GTTGCCCAGGGAATGACTCCACATTGCCCAAATCCT...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR TCA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCATGTTCAGGTCCTCGATaGACTTACTGGCCTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEAMKTQHQAWTRSLAPACSGPR*TYWPQG Trigger: GCCTTGAGGCCAGTAAGTTCATCGAGGACCTGAACA...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR GCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCACACTTTCAAAAGACCTaGCAGAGCACACTGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSHFQKT*QSTLWR Trigger: TCTCCACAGTGTGCTCTGGCAGGTCTTTTGAAAGTG...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| 3UTR CAA 72 bp | CACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTaGGCTCTCCTTCACCAAGCAAACTCCAATGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: HSRETQPPRCPS*ALLHQANSNVQ Trigger: TTGTACATTGGAGTTTGCTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGGTAGGATCATGTCCATaGTCAGGTGTCCACAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKVGSCP*SGVHKE Trigger: TTCTTTGTGGACACCTGATCATGGACATGATCCTAC...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR TCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCGACCGTCCTCGTCATTaGGCTCCAGACCACAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCDRPRH*APDHSP Trigger: AGGACTGTGGTCTGGAGCTCAATGACGAGGACGGTC...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR GCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCCTTCCTGCTGCAGGCTaGACAGGTGAAGCACGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCLPAAG*TGEARI Trigger: GATGCGTGCTTCACCTGTGCAGCCTGCAGCAGGAAG...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CCA 90 bp | AGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGCTCACCTCTATCAAGTTTCCTCAAATTCTaGGTTGTTGCCAGCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVIRVQVLAQRKCCSPLSSFLKF*VVASTL Trigger: AAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACT...TGATAGAGGTGAGCAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCTCTCAGAGTCCACGGTaGAAGGAACCCCATCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCSQSPR*KEPHPD Trigger: GTCTGGATGGGGTTCCTTTCACCGTGGACTCTGAGA...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCGGATTTTGGCCATCTTaGTCGCGAACACCCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCGFWPS*SRTPFE Trigger: CTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCC...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCTGCTGCTGCTGGAGGTaGATTTTGGCCATCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCCCCWR*ILAILV Trigger: GACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCA...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCTGCTGTTGCTGCTGCTaGAGGTGGATTTTGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCCCCCC*RWILAI Trigger: GATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCA...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAAAGGGCAATCTCACCCTaGAGGGGGTGGGACTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRFLFRDTVECAQHNLKRAISP*RGWDSL Trigger: CAGGGAGTCCCACCCCCTCCAGGGTGAGATTGCCCT...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAAGGACCAAAGGCCTGTTaGCTTCTCGCTGCTATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRFLFRDTVECAQHNLKGPKAC*LLAAMA Trigger: GGCCATAGCAGCGAGAAGCCAACAGGCCTTTGGTCC...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAATGTCCACAAGGGGTTTaGAGACCCTGCCTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRFLFRDTVECAQHNLKCPQGV*RPCLKP Trigger: AGGCTTCAGGCAGGGTCTTCAAACCCCTTGTGGACA...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR TCA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCAAGAATACTTTGCCATTaGCAAAATAGAAGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEAMKTQHQAWTRSLAPARILCH*QNRRPF Trigger: GAAAGGCCTTCTATTTTGTCAATGGCAAAGTATTCT...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAAGTGGACATTACCGGATaGACGTTACTGGTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRFLFRDTVECAQHNLKVDITG*TLLVGL Trigger: CAGCCCCACCAGTAACGTCCATCCGGTAATGTCCAC...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CAA 72 bp | TATGTCCACATATCCACCTCAGAAGTGGTCTTAATATaGACAGCATGTGGTCTCCATCTTAGCCTGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: YVHISTSEVVLI*TACGLHLSLAT Trigger: GGTTGCCAGGCTAAGATGGAGACCACATGCTGTCAATATTAAGACCACTTCTGAGGTGGATATGTGGACATA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAATGTCAGTGGACCAGCTaGGAGAACTCTCTTTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRFLFRDTVECAQHNLKCQWTS*ENSLYK Trigger: CTTGTAAAGAGAGTTCTCCCAGCTGGTCCACTGACA...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR GCA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAAACCCCACTGTGGGCTTaGCAAAGAGAAATTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSRFLFRDTVECAQHNLKTPLWA*QREIVI Trigger: TATGACAATTTCTCTTTGGCAAGCCCACAGTGGGGT...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CCA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAACATTCTCCAAGCCCATaGAAGAAAAACCGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRFLFRDTVECAQHNLKHSPSP*KKNRGS Trigger: TGAACCTCGGTTTTTCTTCCATGGGCTTGGAGAATG...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CAA 72 bp | CACCAACAGTCTCCAATAGGATGGATGAATTCCTCTTaGATCTGTGATTTGGTGAAAACTATCTGTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HQQSPIGWMNSS*ICDLVKTICEV Trigger: TACCTCACAGATAGTTTTCACCAAATCACAGATCAAAGAGGAATTCATCCATCCTATTGGAGACTGTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| 3UTR CAA 72 bp | CCAATAGGATGGATGAATTCCTCTTTGATCTGTGATTaGGTGAAAACTATCTGTGAGGTATGTTTTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PIGWMNSSLICD*VKTICEVCFVC Trigger: ACACACAAAACATACCTCACAGATAGTTTTCACCAAATCACAGATCAAAGAGGAATTCATCCATCCTATTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | AATTCCGCAGTGGAGGGTCCAAGCTCAGGGCCCGGTGCGAGGGTCTaGCAGGGCAATCTCACCCTGGAGGGGGTGGGACTCCCTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSAVEGPSSGPGARV*QGNLTLEGVGLPGS Trigger: GCTCCCAGGGAGTCCCACCCCCTCCAGGGTGAGATTGCCCTGCCAGACCCTCGCACCGGGCCCTGAGCTTGGACCCTCCACTGCGGAATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | GGCCCGGTGCGAGGGTCTGGCAGGGCAATCTCACCCTGGAGGGGGTaGGACTCCCTGGGAGCACAGGTTCCAGACTACTGTCAGTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GPVRGSGRAISPWRG*DSLGAQVPDYCQWT Trigger: GGTCCACTGACAGTAGTCTGGAACCTGTGCTCCCAGGGAGTCCCACCCCCTCCAGGGTGAGATTGCCCTGCCAGACCCTCGCACCGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS GCA 90 bp | AGGTGCCACTGTTGGCACAGCCAGAGGAGGCTTAGCGGCCCCATCTaGAGCCAGCTTGCCGCTCGCACCCTGACGGTTCCCACCGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RCHCWHSQRRLSGPI*SQLAARTLTVPTVD Trigger: GTCAACGGTGGGAACCGTCAGGGTGCGAGCGGCAAGCTGGCTGCAGATGGGGCCGCTAAGCCTCCTCTGGCTGTGCCAACAGTGGCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 90 bp | CTGCCAGGCCTTGCACCATGGGCAGATGGCCTGATCCTCTGCTCCTaGGATGGGTACGAGGGCTGCGCGGCCGCAGTGGTAGTAGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPGLAPWADGLILCS*DGYEGCAAAVVVAN Trigger: ATTAGCTACTACCACTGCGGCCGCGCAGCCCTCGTACCCATCTCAGGAGCAGAGGATCAGGCCATCTGCCCATGGTGCAAGGCCTGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS GCA 90 bp | ACCGGGCTTCTGCCTGCCCTAGGTAGGGCCTCCTCCTGTAGGAGCTaGTGCTGTTGCTGCTGCTGGAGGTGGATTTTGGCCATCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGLLPALGRASSCRS*CCCCCWRWILAILV Trigger: GACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCCTACAGGAGGAGGCCCTACCTAGGGCAGGCAGAAGCCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | ACCGAGGTTCACTCGCTGAGAGGAGGCAGTGGACCAAAGGCCTGTTaGCTTCTCGCTGCTATGGCCACCAATGCCACCGTCCTGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: TEVHSLRGGSGPKAC*LLAAMATNATVLAT Trigger: AGTGGCCAGGACGGTGGCATTGGTGGCCATAGCAGCGAGAAGCCAACAGGCCTTTGGTCCACTGCCTCCTCTCAGCGAGTGAACCTCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | TCCCTGGGCAACCAGGCCATCCACTTCCTACACCCAGACTCACGCTaGGGCACCCTTCAGGTTTATCACCCCACTGTGGGCTTGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLGNQAIHFLHPDSR*GTLQVYHPTVGLPK Trigger: CTTTGGCAAGCCCACAGTGGGGTGATAAACCTGAAGGGTGCCCCAGCGTGAGTCTGGGTGTAGGAAGTGGATGGCCTGGTTGCCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CAA 90 bp | GAGCTCTACCGGCCTTGCTTCACCACCCAAGCCAGCTGCTGGGTACCCAGCCTGTGGATTTTGGCCATCTaGGTCGCGAACACCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ELYRPCFTTQASCWVPSLWILAI*VANTLR Trigger: TCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCA...CAGGCTGGGTACCCAGCAGCTGGCTTGGGTGGTGAAGCAAGGCCGGTAGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CAA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGTGCTGGAGGTGGATTTaGGCCATCTTGGTCGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HGLCEGYPGAGARPEEVLCWRWI*AILVAN Trigger: GTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCA...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 90 bp | AGTCCGCTTTGGGGTGAGCATCCATCTCTCGCTCCAGACGCTGGGTaGGGGCTTCCAACTTCAATTCCGCAGTGGAGGGTCCAAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLWGEHPSLAPDAG*GLPTSIPQWRVQAQ Trigger: CTGAGCTTGGACCCTCCACTGCGGAATTGAAGTTGGAAGCCCTCACCCAGCGTCTGGAGCGAGAGATGGATGCTCACCCCAAAGCGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CAA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCATCTGACTGCCAGGCCTaGCACCATGGGCAGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EEAMKTQHQAWTRSLAPASDCQA*HHGQMA Trigger: GGCCATCTGCCCATGGTGCAAGGCCTGGCAGTCAGA...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CAA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGTGGACCAAAGGCCTGTaGGCTTCTCGCTGCTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKWTKGL*ASRCYG Trigger: GCCATAGCAGCGAGAAGCCAACAGGCCTTTGGTCCA...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 90 bp | GCGCTGCTAGGGACCATCGGTGCTGAAACAGTTGTGCCCTTGGGTTaGGCGGAGGTCCCATTCTCCAAGCCCATGGAAGAAAAACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALLGTIGAETVVPLG*AEVPFSKPMEEKPR Trigger: CCTCGGTTTTTCTTCCATGGGCTTGGAGAATGGGACCTCCGCTCAACCCAAGGGCACAACTGTTTCAGCACCGATGGTCCCTAGCAGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 90 bp | ACAGGTGGTCCTCCAGTGGATAGCAGCGGTGACCGTCCTCGTCATTaGGCTCCAGACCACAGTCCTCACAGTGGTAGCACTCTACGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGGPPVDSSGDRPRH*APDHSPHSGSTLRG Trigger: ACCACGTAGAGTGCTACCACTGTGAGGACTGTGGTCTGGAGCTCAATGACGAGGACGGTCACCGCTGCTATCCACTGGAGGACCACCTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS GCA 90 bp | CTCCCATGGCCTGACAGGCCTGGCCAGCTCCAAACACCCCTTTGCTaGATTTCACACAGGAACCGAAGTAGTCCGCTTTGGGGTGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LPWPDRPGQLQTPLC*ISHRNRSSPLWGEH Trigger: ATGCTCACCCCAAAGCGGACTACTTCGGTTCCTGTGTGAAATGCAGCAAAGGGGTGTTTGGAGCTGGCCAGGCCTGTCAGGCCATGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS GCA 90 bp | GATCTCCCATGGCCTGACAGGCCTGGCCAGCTCCAAACACCCCTTTaGTGCATTTCACACAGGAACCGAAGTAGTCCGCTTTGGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DLPWPDRPGQLQTPL*CISHRNRSSPLWGE Trigger: CTCACCCCAAAGCGGACTACTTCGGTTCCTGTGTGAAATGCAGCAAAGGGGTGTTTGGAGCTGGCCAGGCCTGTCAGGCCATGGGAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | AGGGCCTCCTCCTGTAGGAGCTGCTGCTGTTGCTGCTGCTGGAGGTaGATTTTGGCCATCTTGGTCGCGAACACCCTTCGAGTTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RASSCRSCCCCCCWR*ILAILVANTLRVSS Trigger: TGAGGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCCTACAGGAGGAGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | CAGTTGTGCCCTTGGGTTGAGCGGAGGTCCCATTCTCCAAGCCCATaGAAGAAAAACCGAGGTTCACTCGCTGAGAGGAGGCAGTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: QLCPWVERRSHSPSP*KKNRGSLAERRQWT Trigger: GGTCCACTGCCTCCTCTCAGCGAGTGAACCTCGGTTTTTCTTCCATGGGCTTGGAGAATGGGACCTCCGCTCAACCCAAGGGCACAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CAA 90 bp | CATGGGCTGTGTGAGGGTTATCCGGGTGCAGGTGCTCGCCCAGAGGAAGTGCTGGCTCCAAACACCCCTTaGCTGCATTTCACACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HGLCEGYPGAGARPEEVLAPNTP*LHFTQE Trigger: TTCCTGTGTGAAATGCAGCAAAGGGGTGTTTGGAGC...CAGCACTTCCTCTGGGCGAGCACCTGCACCCGGATAACCCTCACACAGCCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 90 bp | TTGGCTTCTCGCTGCTATGGCCACCAATGCCACCGTCCTGGCCACTaGTGCCACTTTCAAAAGACCTGCCAGAGCACACTGTGGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LASRCYGHQCHRPGH*CHFQKTCQSTLWRA Trigger: AGCTCTCCACAGTGTGCTCTGGCAGGTCTTTTGAAAGTGGCATCAGTGGCCAGGACGGTGGCATTGGTGGCCATAGCAGCGAGAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS GCA 90 bp | TCTTGGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTGGGTTGTTaGCAGCACCCTTGTCCACCCGGAAGAGCCCATCCTTGGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SWSRTPFEFPQILGC*QHPCPPGRAHPWRP Trigger: AGGCCTCCAAGGATGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | GCTGTGGCTGGTAAGGGTGATGGTCTCCACAGGATTTGGGCAATGTaGAGTCATTCCCTGGGCAACCAGGCCATCCACTTCCTACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVAGKGDGLHRIWAM*SHSLGNQAIHFLHP Trigger: TGGGTGTAGGAAGTGGATGGCCTGGTTGCCCAGGGAATGACTCCACATTGCCCAAATCCTGTGGAGACCATCACCCTTACCAGCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | CTGTGGAGAGCTGTGGCTGGTAAGGGTGATGGTCTCCACAGGATTTaGGCAATGTGGAGTCATTCCCTGGGCAACCAGGCCATCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWRAVAGKGDGLHRI*AMWSHSLGNQAIHF Trigger: GAAGTGGATGGCCTGGTTGCCCAGGGAATGACTCCACATTGCCCAAATCCTGTGGAGACCATCACCCTTACCAGCCACAGCTCTCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | AGCCCATGGAAGAAAAACCGAGGTTCACTCGCTGAGAGGAGGCAGTaGACCAAAGGCCTGTTGGCTTCTCGCTGCTATGGCCACCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SPWKKNRGSLAERRQ*TKGLLASRCYGHQC Trigger: GCATTGGTGGCCATAGCAGCGAGAAGCCAACAGGCCTTTGGTCCACTGCCTCCTCTCAGCGAGTGAACCTCGGTTTTTCTTCCATGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CAA 90 bp | ACAGCAGGGAGACCCAGCCTCCCAGATGTCCAAGCTTGGCTCTCCTTCACCAAGTCCTCAAATTCTGGGTaGTTGCCAGCACCCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TAGRPSLPDVQAWLSFTKSSNSG*LPAPLS Trigger: GGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGA...CTTGGTGAAGGAGAGCCAAGCTTGGACATCTGGGAGGCTGGGTCTCCCTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS-3UTR CAA 90 bp | GAGGAAGCAATGAAAACACAGCACCAAGCATGGACGAGAAGCCTGGCGCCTGCACGGAAGAGCCCATCCTaGGAGGCCTCATACATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EEAMKTQHQAWTRSLAPARKSPS*EASYMF Trigger: GAACATGTATGAGGCCTCCAAGGATGGGCTCTTCCG...TGCAGGCGCCAGGCTTCTCGTCCATGCTTGGTGCTGTGTTTTCATTGCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 90 bp | ACTTGGGCCCATCCTGCAGCCAAGGCTGAGTGTCCACAAGGGGTTTaGAGACCCTGCCTGAAGCCTCATATCCCAGACCTGAATCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TWAHPAAKAECPQGV*RPCLKPHIPDLNLF Trigger: AAAGAGATTCAGGTCTGGGATATGAGGCTTCAGGCAGGGTCTTCAAACCCCTTGTGGACACTCAGCCTTGGCTGCAGGATGGGCCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 90 bp | AATAGAAGGCCTTTCCTCTTAACTTCCTGCTGCAGGCTGCACAGGTaGAGCACGCATCGTGGTAGAGATCTCCCATGGCCTGACAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NRRPFLLTSCCRLHR*STHRGRDLPWPDRP Trigger: AGGCCTGTCAGGCCATGGGAGATCTCTACCACGATGCGTGCTTCACCTGTGCAGCCTGCAGCAGGAAGTTAAGAGGAAAGGCCTTCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026269.4 ENSMUST00000217639.2 |
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| CDS CCA 90 bp | TTTGGCCATCTTGGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTaGGTTGTTGCCAGCACCCTTGTCCACCCGGAAGAGCCCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FGHLGREHPSSFLKF*VVASTLVHPEEPIL Trigger: AAGGATGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | GGAGCTGCTGCTGTTGCTGCTGCTGGAGGTGGATTTTGGCCATCTTaGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTGGGTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GAAAVAAAGGGFWPS*SRTPFEFPQILGCC Trigger: GCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | CCTCCTGTAGGAGCTGCTGCTGTTGCTGCTGCTGGAGGTGGATTTTaGCCATCTTGGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPVGAAAVAAAGGGF*PSWSRTPFEFPQIL Trigger: CAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCCTACAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 90 bp | GATGCCACTTTCAAAAGACCTGCCAGAGCACACTGTGGAGAGCTGTaGCTGGTAAGGGTGATGGTCTCCACAGGATTTGGGCAATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DATFKRPARAHCGEL*LVRVMVSTGFGQCG Trigger: TCCACATTGCCCAAATCCTGTGGAGACCATCACCCTTACCAGCCACAGCTCTCCACAGTGTGCTCTGGCAGGTCTTTTGAAAGTGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 90 bp | TGGACCAGCTGGGAGAACTCTCTTTACAAGATAACTCAGATGGAGTaGACATTACCGGATGGACGTTACTGGTGGGGCTGGGCTTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: WTSWENSLYKITQME*TLPDGRYWWGWAWD Trigger: GTCCCAAGCCCAGCCCCACCAGTAACGTCCATCCGGTAATGTCCACTCCATCTGAGTTATCTTGTAAAGAGAGTTCTCCCAGCTGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CAA 90 bp | ACTCTACCAGAGCCTCCAGGAAGGCAAAGACATTGTGTTTTCTCCTTTCCCTGCGTGTCCACAAGGGGTTaGAAGACCCTGCCTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPEPPGRQRHCVFSFPCVSTRG*KTLPEA Trigger: GGCTTCAGGCAGGGTCTTCAAACCCCTTGTGGACAC...GCAGGGAAAGGAGAAAACACAATGTCTTTGCCTTCCTGGAGGCTCTGGTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS GCA 90 bp | ACTCACGCTGGGGCACCCTTCAGGTTTATCACCCCACTGTGGGCTTaGCAAAGAGAAATTGTCATAATAGTCTCCGTGAGTGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: THAGAPFRFITPLWA*QREIVIIVSVSEAG Trigger: TCCTGCCTCACTCACGGAGACTATTATGACAATTTCTCTTTGGCAAGCCCACAGTGGGGTGATAAACCTGAAGGGTGCCCCAGCGTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 90 bp | ACCCAGACTCACGCTGGGGCACCCTTCAGGTTTATCACCCCACTGTaGGCTTGCCAAAGAGAAATTGTCATAATAGTCTCCGTGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQTHAGAPFRFITPL*ACQREIVIIVSVSE Trigger: CTCACTCACGGAGACTATTATGACAATTTCTCTTTGGCAAGCCCACAGTGGGGTGATAAACCTGAAGGGTGCCCCAGCGTGAGTCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 90 bp | GAACTCTCTTTACAAGATAACTCAGATGGAGTGGACATTACCGGATaGACGTTACTGGTGGGGCTGGGCTTGGGACTAGTGCCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELSLQDNSDGVDITG*TLLVGLGLGLVPDS Trigger: GGAGTCTGGCACTAGTCCCAAGCCCAGCCCCACCAGTAACGTCCATCCGGTAATGTCCACTCCATCTGAGTTATCTTGTAAAGAGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 90 bp | ACTGTGGGCTTGCCAAAGAGAAATTGTCATAATAGTCTCCGTGAGTaGGGCAGGAAGGGTCTTCACAGGAGGGACTCAGGCCGTGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVGLPKRNCHNSLRE*GRKGLHRRDSGRVK Trigger: CTTTACACGGCCTGAGTCCCTCCTGTGAAGACCCTTCCTGCCTCACTCACGGAGACTATTATGACAATTTCTCTTTGGCAAGCCCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 90 bp | GACTCCCTGGGAGCACAGGTTCCAGACTACTGTCAGTGGACCAGCTaGGAGAACTCTCTTTACAAGATAACTCAGATGGAGTGGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: DSLGAQVPDYCQWTS*ENSLYKITQMEWTL Trigger: TAATGTCCACTCCATCTGAGTTATCTTGTAAAGAGAGTTCTCCCAGCTGGTCCACTGACAGTAGTCTGGAACCTGTGCTCCCAGGGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CAA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAATTGTTGCCAGCACCCTaGTCCACCCGGAAGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRFLFRDTVECAQHNLKLLPAP*STRKSP Trigger: TGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAA...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS-3UTR CAA 90 bp | CTATCAAGGTTTCTCTTTAGGGACACTGTGGAATGTGCTCAACACAACCTGAAATCAAATTCTGGGTTGTaGCCAGCACCCTTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LSRFLFRDTVECAQHNLKSNSGL*PAPLST Trigger: GGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGA...TTTCAGGTTGTGTTGAGCACATTCCACAGTGTCCCTAAAGAGAAACCTTGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 90 bp | GGGCCTGTAGGATCAAAAAGTCTTCCTCACAGAATACTTTGCCATTaGCAAAATAGAAGGCCTTTCCTCTTAACTTCCTGCTGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPVGSKSLPHRILCH*QNRRPFLLTSCCRL Trigger: CAGCCTGCAGCAGGAAGTTAAGAGGAAAGGCCTTCTATTTTGTCAATGGCAAAGTATTCTGTGAGGAAGACTTTTTGATCCTACAGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217639.2 |
||
| CDS TCA 90 bp | TCCATGATCAGGTGTCCACAAAGAAAACACCTGTCCGCAGACTGCTaGAAGCCAGAATACAAAAAGTCTTCCTCACAGAATACTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SMIRCPQRKHLSADC*KPEYKKSSSQNTLP Trigger: TGGCAAAGTATTCTGTGAGGAAGACTTTTTGTATTCTGGCTTTCAGCAGTCTGCGGACAGGTGTTTTCTTTGTGGACACCTGATCATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 90 bp | GAAAGCCAGAATACAAAAAGTCTTCCTCACAGAATACTTTGCCATTaGCAAAATAGAAGGCCTTTCCTCTTAACTTCCTGCTGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESQNTKSLPHRILCH*QNRRPFLLTSCCRL Trigger: CAGCCTGCAGCAGGAAGTTAAGAGGAAAGGCCTTCTATTTTGTCAATGGCAAAGTATTCTGTGAGGAAGACTTTTTGTATTCTGGCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS GCA 72 bp | TGTTGGCACAGCCAGAGGAGGCTTAGCGGCCCCATCTaGAGCCAGCTTGCCGCTCGCACCCTGACGGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: CWHSQRRLSGPI*SQLAARTLTVP Trigger: GGGAACCGTCAGGGTGCGAGCGGCAAGCTGGCTGCAGATGGGGCCGCTAAGCCTCCTCTGGCTGTGCCAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 72 bp | CTTGCACCATGGGCAGATGGCCTGATCCTCTGCTCCTaGGATGGGTACGAGGGCTGCGCGGCCGCAGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LAPWADGLILCS*DGYEGCAAAVV Trigger: TACCACTGCGGCCGCGCAGCCCTCGTACCCATCTCAGGAGCAGAGGATCAGGCCATCTGCCCATGGTGCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | GCAGTGGACCAAAGGCCTGTTGGCTTCTCGCTGCTATaGCCACCAATGCCACCGTCCTGGCCACTGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AVDQRPVGFSLL*PPMPPSWPLMP Trigger: TGGCATCAGTGGCCAGGACGGTGGCATTGGTGGCCATAGCAGCGAGAAGCCAACAGGCCTTTGGTCCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | CACTCGCTGAGAGGAGGCAGTGGACCAAAGGCCTGTTaGCTTCTCGCTGCTATGGCCACCAATGCCACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: HSLRGGSGPKAC*LLAAMATNATV Trigger: GACGGTGGCATTGGTGGCCATAGCAGCGAGAAGCCAACAGGCCTTTGGTCCACTGCCTCCTCTCAGCGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | ACAGTTCTGACTGCCAGGCCTTGCACCATGGGCAGATaGCCTGATCCTCTGCTCCTGAGATGGGTACGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TVLTARPCTMGR*PDPLLLRWVRG Trigger: CCCTCGTACCCATCTCAGGAGCAGAGGATCAGGCCATCTGCCCATGGTGCAAGGCCTGGCAGTCAGAACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | TCACAGGAGGGACTCAGGCCGTGTAAAGCAGGTCTCTaGGAACTCACAGGCCCCTCCCTGGAACCACAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQEGLRPCKAGL*ELTGPSLEPQF Trigger: GAACTGTGGTTCCAGGGAGGGGCCTGTGAGTTCCCAGAGACCTGCTTTACACGGCCTGAGTCCCTCCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | AACCAGGCCATCCACTTCCTACACCCAGACTCACGCTaGGGCACCCTTCAGGTTTATCACCCCACTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NQAIHFLHPDSR*GTLQVYHPTVG Trigger: GCCCACAGTGGGGTGATAAACCTGAAGGGTGCCCCAGCGTGAGTCTGGGTGTAGGAAGTGGATGGCCTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 72 bp | CGCTGCTATGGCCACCAATGCCACCGTCCTGGCCACTaGTGCCACTTTCAAAAGACCTGCCAGAGCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: RCYGHQCHRPGH*CHFQKTCQSTL Trigger: CAGTGTGCTCTGGCAGGTCTTTTGAAAGTGGCATCAGTGGCCAGGACGGTGGCATTGGTGGCCATAGCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 72 bp | CCTCCAGTGGATAGCAGCGGTGACCGTCCTCGTCATTaGGCTCCAGACCACAGTCCTCACAGTGGTAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PPVDSSGDRPRH*APDHSPHSGST Trigger: AGTGCTACCACTGTGAGGACTGTGGTCTGGAGCTCAATGACGAGGACGGTCACCGCTGCTATCCACTGGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 72 bp | GGAGGGGTGCAGGTGAGGGTCCTTTCTCCAGTCTCTTaGCATGGCAGGAGTGACAGAACAGGTGGTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGVQVRVLSPVS*HGRSDRTGGPP Trigger: TGGAGGACCACCTGTTCTGTCACTCCTGCCATGTCAAGAGACTGGAGAAAGGACCCTCACCTGCACCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | GCTGTGGCTGGTAAGGGTGATGGTCTCCACAGGATTTaGGCAATGTGGAGTCATTCCCTGGGCAACCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVAGKGDGLHRI*AMWSHSLGNQA Trigger: GGCCTGGTTGCCCAGGGAATGACTCCACATTGCCCAAATCCTGTGGAGACCATCACCCTTACCAGCCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | GACATGGCAGGAGTGACAGAACAGGTGGTCCTCCAGTaGATAGCAGCGGTGACCGTCCTCGTCATTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DMAGVTEQVVLQ*IAAVTVLVIEL Trigger: GAGCTCAATGACGAGGACGGTCACCGCTGCTATCCACTGGAGGACCACCTGTTCTGTCACTCCTGCCATGTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CAA 90 bp | TCTGGGTTGTTGCCAGCACCCTTGTCCACCCGGAAGAGCCCATCCTaGGAGGCCTCATACATGTTCAGGTCCTCGATGAACTTACTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGLLPAPLSTRKSPS*EASYMFRSSMNLLA Trigger: GGCCAGTAAGTTCATCGAGGACCTGAACATGTATGAGGCCTCCAAGGATGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CAA 90 bp | ATCTTGGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTGGGTTGTaGCCAGCACCCTTGTCCACCCGGAAGAGCCCATCCTTGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ILVANTLRVSSNSGL*PAPLSTRKSPSLEA Trigger: GGCCTCCAAGGATGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CAA 90 bp | GCCATCTTGGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTGGGTaGTTGCCAGCACCCTTGTCCACCCGGAAGAGCCCATCCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AILVANTLRVSSNSG*LPAPLSTRKSPSLE Trigger: CTCCAAGGATGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CAA 90 bp | GATGGAGTGGACATTACCGGATGGACGTTACTGGTGGGGCTGGGCTaGGGACTAGTGCCAGACTCCACGCATCCAAACTTAGGATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DGVDITGWTLLVGLG*GLVPDSTHPNLGSS Trigger: GCTGGATCCTAAGTTTGGATGCGTGGAGTCTGGCACTAGTCCCAAGCCCAGCCCCACCAGTAACGTCCATCCGGTAATGTCCACTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 72 bp | GGGACCATCGGTGCTGAAACAGTTGTGCCCTTGGGTTaGGCGGAGGTCCCATTCTCCAAGCCCATGGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GTIGAETVVPLG*AEVPFSKPMEE Trigger: TTCTTCCATGGGCTTGGAGAATGGGACCTCCGCTCAACCCAAGGGCACAACTGTTTCAGCACCGATGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 72 bp | CATCCTGCAGCCAAGGCTGAGTGTCCACAAGGGGTTTaGAGACCCTGCCTGAAGCCTCATATCCCAGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: HPAAKAECPQGV*RPCLKPHIPDL Trigger: CAGGTCTGGGATATGAGGCTTCAGGCAGGGTCTTCAAACCCCTTGTGGACACTCAGCCTTGGCTGCAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS GCA 72 bp | CCAGCCCGGTGGTCATACCTGGCTGGGTACTGTCCTTaGCAGCTGTCGAGGATAATGGAGCAGAAACTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PARWSYLAGYCP*QLSRIMEQKLR Trigger: TCTCAGTTTCTGCTCCATTATCCTCGACAGCTGGCAAGGACAGTACCCAGCCAGGTATGACCACCGGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS GCA 72 bp | TGGCCTGACAGGCCTGGCCAGCTCCAAACACCCCTTTaGTGCATTTCACACAGGAACCGAAGTAGTCCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WPDRPGQLQTPL*CISHRNRSSPL Trigger: AAGCGGACTACTTCGGTTCCTGTGTGAAATGCAGCAAAGGGGTGTTTGGAGCTGGCCAGGCCTGTCAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | GGAGCTGCTGCTGTTGCTGCTGCTGGAGGTGGATTTTaGCCATCTTGGTCGCGAACACCCTTCGAGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GAAAVAAAGGGF*PSWSRTPFEFP Trigger: AGGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | TCCTGTAGGAGCTGCTGCTGTTGCTGCTGCTGGAGGTaGATTTTGGCCATCTTGGTCGCGAACACCCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: SCRSCCCCCCWR*ILAILVANTLR Trigger: TCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCCTACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | CCTTGGGTTGAGCGGAGGTCCCATTCTCCAAGCCCATaGAAGAAAAACCGAGGTTCACTCGCTGAGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PWVERRSHSPSP*KKNRGSLAERR Trigger: CCTCCTCTCAGCGAGTGAACCTCGGTTTTTCTTCCATGGGCTTGGAGAATGGGACCTCCGCTCAACCCAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | TGCTGCATTTCACACAGGAACCGAAGTAGTCCGCTTTaGGGTGAGCATCCATCTCTCGCTCCAGACGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CCISHRNRSSPL*GEHPSLAPDAG Trigger: CCCAGCGTCTGGAGCGAGAGATGGATGCTCACCCCAAAGCGGACTACTTCGGTTCCTGTGTGAAATGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CAA 72 bp | TTGCCAGCACCCTTGTCCACCCGGAAGAGCCCATCCTaGGAGGCCTCATACATGTTCAGGTCCTCGATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPAPLSTRKSPS*EASYMFRSSMN Trigger: GTTCATCGAGGACCTGAACATGTATGAGGCCTCCAAGGATGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CAA 72 bp | GCGAACACCCTTCGAGTTTCCTCAAATTCTGGGTTGTaGCCAGCACCCTTGTCCACCCGGAAGAGCCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: ANTLRVSSNSGL*PAPLSTRKSPS Trigger: GGATGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CAA 72 bp | GTCGCGAACACCCTTCGAGTTTCCTCAAATTCTGGGTaGTTGCCAGCACCCTTGTCCACCCGGAAGAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VANTLRVSSNSG*LPAPLSTRKSP Trigger: TGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CAA 72 bp | AGGAGCTGCTGCTGTTGCTGCTGCTGGAGGTGGATTTaGGCCATCTTGGTCGCGAACACCCTTCGAGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSCCCCCCWRWI*AILVANTLRVS Trigger: GGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CAA 72 bp | TCCAGCCCGGTGGTCATACCTGGCTGGGTACTGTCCTaGCCAGCTGTCGAGGATAATGGAGCAGAAACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSPVVIPGWVLS*PAVEDNGAETE Trigger: CTCAGTTTCTGCTCCATTATCCTCGACAGCTGGCAAGGACAGTACCCAGCCAGGTATGACCACCGGGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS TCA 72 bp | TCCAAGCCCATGGAAGAAAAACCGAGGTTCACTCGCTaGGAGGAGGCAGTGGACCAAAGGCCTGTTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKPMEEKPRFTR*EEAVDQRPVGF Trigger: GAAGCCAACAGGCCTTTGGTCCACTGCCTCCTCTCAGCGAGTGAACCTCGGTTTTTCTTCCATGGGCTTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS GCA 72 bp | CGAACACCCTTCGAGTTTCCTCAAATTCTGGGTTGTTaGCAGCACCCTTGTCCACCCGGAAGAGCCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: RTPFEFPQILGC*QHPCPPGRAHP Trigger: AGGATGGGCTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | CTTGGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTaGGTTGTTGCCAGCACCCTTGTCCACCCGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGREHPSSFLKF*VVASTLVHPEE Trigger: CTCTTCCGGGTGGACAAGGGTGCTGGCAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | GTCTCCACAGGATTTGGGCAATGTGGAGTCATTCCCTaGGCAACCAGGCCATCCACTTCCTACACCCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VSTGFGQCGVIP*ATRPSTSYTQT Trigger: AGTCTGGGTGTAGGAAGTGGATGGCCTGGTTGCCCAGGGAATGACTCCACATTGCCCAAATCCTGTGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | GGTAAGGGTGATGGTCTCCACAGGATTTGGGCAATGTaGAGTCATTCCCTGGGCAACCAGGCCATCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GKGDGLHRIWAM*SHSLGNQAIHF Trigger: GAAGTGGATGGCCTGGTTGCCCAGGGAATGACTCCACATTGCCCAAATCCTGTGGAGACCATCACCCTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | AAGAAAAACCGAGGTTCACTCGCTGAGAGGAGGCAGTaGACCAAAGGCCTGTTGGCTTCTCGCTGCTATGGC | + |
|
Preference number: 6 (lower is better) Translates to: KKNRGSLAERRQ*TKGLLASRCYG Trigger: GCCATAGCAGCGAGAAGCCAACAGGCCTTTGGTCCACTGCCTCCTCTCAGCGAGTGAACCTCGGTTTTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CAA 72 bp | GACATTACCGGATGGACGTTACTGGTGGGGCTGGGCTaGGGACTAGTGCCAGACTCCACGCATCCAAACTTA | + |
|
Preference number: 6 (lower is better) Translates to: DITGWTLLVGLG*GLVPDSTHPNL Trigger: TAAGTTTGGATGCGTGGAGTCTGGCACTAGTCCCAAGCCCAGCCCCACCAGTAACGTCCATCCGGTAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
||
| CDS CCA 72 bp | TTCAAAAGACCTGCCAGAGCACACTGTGGAGAGCTGTaGCTGGTAAGGGTGATGGTCTCCACAGGATTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FKRPARAHCGEL*LVRVMVSTGFG Trigger: CCCAAATCCTGTGGAGACCATCACCCTTACCAGCCACAGCTCTCCACAGTGTGCTCTGGCAGGTCTTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CAA 90 bp | AGGAGCTGCTGCTGTTGCTGCTGCTGGAGGTGGATTTTGGCCATCTaGGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTGGGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RSCCCCCCWRWILAI*VANTLRVSSNSGLL Trigger: CAACAACCCAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CAA 90 bp | TCCTCCTGTAGGAGCTGCTGCTGTTGCTGCTGCTGGAGGTGGATTTaGGCCATCTTGGTCGCGAACACCCTTCGAGTTTCCTCAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: SSCRSCCCCCCWRWI*AILVANTLRVSSNS Trigger: AGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGCAGCAGCTCCTACAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 72 bp | GCTGTTGCTGCTGCTGGAGGTGGATTTTGGCCATCTTaGTCGCGAACACCCTTCGAGTTTCCTCAAATTCTG | + |
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Preference number: 6 (lower is better) Translates to: AVAAAGGGFWPS*SRTPFEFPQIL Trigger: CAGAATTTGAGGAAACTCGAAGGGTGTTCGCGACCAAGATGGCCAAAATCCACCTCCAGCAGCAGCAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 72 bp | TCGAGGATAATGGAGCAGAAACTGAGAGGTAAGACTTaGGCCCATCCTGCAGCCAAGGCTGAGTGTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: SRIMEQKLRGKT*AHPAAKAECPQ Trigger: TTGTGGACACTCAGCCTTGGCTGCAGGATGGGCCCAAGTCTTACCTCTCAGTTTCTGCTCCATTATCCTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 72 bp | GATAGGACTTCCCTAGGGCCTGTAGGATCATGTCCATaGTCAGGTGTCCACAAAGAAAACACCTGTCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: DRTSLGPVGSCP*SGVHKENTCPQ Trigger: CTGCGGACAGGTGTTTTCTTTGTGGACACCTGATCATGGACATGATCCTACAGGCCCTAGGGAAGTCCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 72 bp | CACGCTGGGGCACCCTTCAGGTTTATCACCCCACTGTaGGCTTGCCAAAGAGAAATTGTCATAATAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HAGAPFRFITPL*ACQREIVIIVS Trigger: GGAGACTATTATGACAATTTCTCTTTGGCAAGCCCACAGTGGGGTGATAAACCTGAAGGGTGCCCCAGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 72 bp | TTACAAGATAACTCAGATGGAGTGGACATTACCGGATaGACGTTACTGGTGGGGCTGGGCTTGGGACTAGTG | + |
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Preference number: 6 (lower is better) Translates to: LQDNSDGVDITG*TLLVGLGLGLV Trigger: CACTAGTCCCAAGCCCAGCCCCACCAGTAACGTCCATCCGGTAATGTCCACTCCATCTGAGTTATCTTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 72 bp | CATCCTTGGAGGCCTCATACATGTTCAGGTCCTCGATaGACTTACTGGCCTCAAGGCCCAGATCATCGTATT | + |
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Preference number: 6 (lower is better) Translates to: HPWRPHTCSGPR*TYWPQGPDHRI Trigger: AATACGATGATCTGGGCCTTGAGGCCAGTAAGTTCATCGAGGACCTGAACATGTATGAGGCCTCCAAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 72 bp | TTGCCAAAGAGAAATTGTCATAATAGTCTCCGTGAGTaGGGCAGGAAGGGTCTTCACAGGAGGGACTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LPKRNCHNSLRE*GRKGLHRRDSG Trigger: GCCTGAGTCCCTCCTGTGAAGACCCTTCCTGCCTCACTCACGGAGACTATTATGACAATTTCTCTTTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CCA 72 bp | GGAGCACAGGTTCCAGACTACTGTCAGTGGACCAGCTaGGAGAACTCTCTTTACAAGATAACTCAGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: GAQVPDYCQWTS*ENSLYKITQME Trigger: CTCCATCTGAGTTATCTTGTAAAGAGAGTTCTCCCAGCTGGTCCACTGACAGTAGTCTGGAACCTGTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS CAA 72 bp | TGGGGCACCCTTCAGGTTTATCACCCCACTGTGGGCTaGCCAAAGAGAAATTGTCATAATAGTCTCCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: WGTLQVYHPTVG*PKRNCHNSLRE Trigger: CTCACGGAGACTATTATGACAATTTCTCTTTGGCAAGCCCACAGTGGGGTGATAAACCTGAAGGGTGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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| CDS TCA 72 bp | AATACAAAAAGTCTTCCTCACAGAATACTTTGCCATTaGCAAAATAGAAGGCCTTTCCTCTTAACTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: NTKSLPHRILCH*QNRRPFLLTSC Trigger: GCAGGAAGTTAAGAGGAAAGGCCTTCTATTTTGTCAATGGCAAAGTATTCTGTGAGGAAGACTTTTTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026269.4 |
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