Pregenerated sensors for LILRB4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000112148Ensembl transcript IDs: ENSMUST00000078778.5, ENSMUST00000217705.2, ENSMUST00000218617.2, ENSMUST00000220182.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTaGTTTCAGCTGTTGTTCTGTTCCTGTGTCCTGATGCACAACTGG | + |
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Preference number: 1 (lower is better) Translates to: HGMWGLGLLSVLAAC*FQLLFCSCVLMHNW Trigger: CCAGTTGTGCATCAGGACACAGGAACAGAACAACAGCTGAAACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR CCA 90 bp | AAGAAAAGCAGGAGGAATGACACCAGGACTCCAATCAAAATCTTCTaGTATGTTTCCAGTCCATCTTCAGTGGGTGTAGAGGACTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: KKSRRNDTRTPIKIF*YVSSPSSVGVEDWS Trigger: GGACCAGTCCTCTACACCCACTGAAGATGGACTGGAAACATACCAGAAGATTTTGATTGGAGTCCTGGTGTCATTCCTCCTGCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR CCA 90 bp | CTGGGATCAAATACCAGAAAATCCCTAGTTTTCATTCATGGAATGTaGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: LGSNTRKSLVFIHGM*GLGLLSVLAACWFQ Trigger: CTGAAACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTTTCTGGTATTTGATCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR TCA 90 bp | GAAGCCAGCAGCACTCTCATAGTAACACTTATATATGCCTGCATATaGGGTTGTCATGCTTGGAATGTTGAACTTGGCCTTATTCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: EASSTLIVTLIYACI*GCHAWNVELGLIPG Trigger: ACCAGGAATAAGGCCAAGTTCAACATTCCAAGCATGACAACCTCATATGCAGGCATATATAAGTGTTACTATGAGAGTGCTGCTGGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGACTGGTCCTTGGTTTCTGAGATCATGAGGTCTAGGGAGTTACTTGGTTTTGGCATCACTGTGCTCTaGGAAGCCAGCAGCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: EDWSLVSEIMRSRELLGFGITVL*EASSTL Trigger: GAGAGTGCTGCTGGCTTCTCAGAGCACAGTGATGCC...AAAACCAAGTAACTCCCTAGACCTCATGATCTCAGAAACCAAGGACCAGTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTTCAGCTGTTGTTCTGCCTAGTTTTCATTCATaGAATGTGGGGTCTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GSGSSFCVGCLLVSAVVLPSFHS*NVGSGS Trigger: AGACCCAGACCCCACATTCCATGAATGAAAACTAGG...CAGAACAACAGCTGAAACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGATGCACAACTGGGCATAGGTTACATCCTGGGTCTCTTTGCATGCAGTGTCTTCATTCATGGAATGTaGGGTCTGGGTCTTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PDAQLGIGYILGLFACSVFIHGM*GLGLLS Trigger: AGAAAGAAGACCCAGACCCCACATTCCATGAATGAA...GACACTGCATGCAAAGAGACCCAGGATGTAACCTATGCCCAGTTGTGCATCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGACTCCAATCAAAATCTTCTGGTATGTTTCCAGTCCATCTTCAGTGGGTGTCCAAGAGAGGCCATaGTTTCCTTCCTGGATCAGA | + |
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Preference number: 2 (lower is better) Translates to: TRTPIKIFWYVSSPSSVGVQERP*FPSWIR Trigger: TCTGATCCAGGAAGGAAAGCATGGCCTCTCTTGGAC...ACCCACTGAAGATGGACTGGAAACATACCAGAAGATTTTGATTGGAGTCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR GCA 90 bp | TACATCCTGGGTCTCTTTGCATGCAGTGTCCTTCTGAAGCCTGGAGGGTTTTACTTAGCCTTCTTTTTGTaGCCATACTGGTATCCGATG | + |
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Preference number: 2 (lower is better) Translates to: YILGLFACSVLLKPGGFYLAFFL*PYWYPM Trigger: CATCGGATACCAGTATGGGCACAAAAAGAAGGCTAA...GTAAAACCCTCCAGGCTTCAGAAGGACACTGCATGCAAAGAGACCCAGGATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTTCCAACTGTTCAGCTCTGCATTGTTCTCAGATTGTGTGTTCTTCACAGATGGAATGTGGGGTCTaGGTCTTCTTTCTGTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: VGSNCSALHCSQIVCSSQMECGV*VFFLCW Trigger: CCAACACAGAAAGAAGACCCAGACCCCACATTCCAT...CTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CCA 90 bp | AGACAATTCCCTGGGGGTCTTCATTTTGTGGGTTCCAACTGTTCAGCTCTGCATCCATGCTTTCCTTCCTaGATCAGAATGAATCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: RQFPGGLHFVGSNCSALHPCFPS*IRMNLP Trigger: TGGCAGATTCATTCTGATCCAGGAAGGAAAGCATGG...ATGCAGAGCTGAACAGTTGGAACCCACAAAATGAAGACCCCCAGGGAATTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTTCAGCTGTTGTTCTGTTCCTGTCTGAATGTTCCATTGTaGTTGGGAGTAACAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: GLLSVLAACWFQLLFCSCLNVPL*LGVTAS Trigger: GGATGCTGTTACTCCCAACCACAATGGAACATTCAG...ACAGGAACAGAACAACAGCTGAAACCAGCAAGCAGCCAACACAGAAAGAAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR CAA 90 bp | CCCTGGGGGTCTTCATTTTGTGGGTTCCAACTGTTCAGCTCTGCATaGTTCTCAGATTGTGTGTTCTTCACAGAAGCATTAGCCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PWGSSFCGFQLFSSA*FSDCVFFTEALAFF Trigger: AAAGAAGGCTAATGCTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACCCACAAAATGAAGACCCCCAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCCTAGTTTTCATTCATaGAATGTGGGGTCTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: FSFMECGVWVFFLCWLLAPSFHS*NVGSGS Trigger: AGACCCAGACCCCACATTCCATGAATGAAAACTAGG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000218617.2 ENSMUST00000220182.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCTTCCTGGATCAGAATaGATCTGCCAAATACTATGG | + |
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Preference number: 2 (lower is better) Translates to: FSFMECGVWVFFLCWLLALPGSE*ICQILW Trigger: CCATAGTATTTGGCAGATTCATTCTGATCCAGGAAG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTTTCATTCATGGAATGTaGGGTCTGGGTCTTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: FSFMECGVWVFFLCWLLAFIHGM*GLGLLS Trigger: AGAAAGAAGACCCAGACCCCACATTCCATGAATGAA...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000218617.2 ENSMUST00000220182.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTAAATTCAAGTTTCATTaGTTAGTGTGCCCTGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: FSFMECGVWVFFLCWLLAKFKFH*LVCPGY Trigger: GTAACCAGGGCACACTAATCAATGAAACTTGAATTT...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000218617.2 ENSMUST00000220182.2 |
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| 3UTR CAA 90 bp | GCTTGGAATGTTGAACTTGGCCTTATTCCTGGTTTCCAGAGGGACTaGAGTGTCCCAAGGATTTACACTTTTCTCTTTATACAGATGATA | + |
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Preference number: 2 (lower is better) Translates to: AWNVELGLIPGFQRD*SVPRIYTFLFIQMI Trigger: TATCATCTGTATAAAGAGAAAAGTGTAAATCCTTGGGACACTCAAGTCCCTCTGGAAACCAGGAATAAGGCCAAGTTCAACATTCCAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR CAA 90 bp | TTCATTTTGTGGGTTCCAACTGTTCAGCTCTGCATTGTTCTCAGATaGTGTGTTCTTCACAGAAGCATTAGCCTTCTTTTTGTGCCCATA | + |
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Preference number: 2 (lower is better) Translates to: FILWVPTVQLCIVLR*CVLHRSISLLFVPI Trigger: TATGGGCACAAAAAGAAGGCTAATGCTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACCCACAAAATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACTCCAATCAAAATCTTCTGGTATGTTTCCAGTCCATCTTCAGTGGGTGTAAAATTCAAGTTTCATTaGTTAGTGTGCCCTGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: RTPIKIFWYVSSPSSVGVKFKFH*LVCPGY Trigger: GTAACCAGGGCACACTAATCAATGAAACTTGAATTT...TACACCCACTGAAGATGGACTGGAAACATACCAGAAGATTTTGATTGGAGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGACTCCAATCAAAATCTTCTGGTATGTTTCCAGTCCATCTTCAGTGGGTAGTAACACTTATATATaGCTGCATATGAGGTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: TRTPIKIFWYVSSPSSVGSNTYI*LHMRLS Trigger: TGACAACCTCATATGCAGGCATATATAAGTGTTACT...ACCCACTGAAGATGGACTGGAAACATACCAGAAGATTTTGATTGGAGTCCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTTCAGCTGTTGTTCTGGCATTAGCCTTCTTTTaGTGCCCATACTGGTATCCG | + |
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Preference number: 3 (lower is better) Translates to: GSGSSFCVGCLLVSAVVLALAFF*CPYWYP Trigger: CGGATACCAGTATGGGCACAAAAAGAAGGCTAATGC...CAGAACAACAGCTGAAACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR GCA 72 bp | TGCACAACTGGGCATAGGTTACATCCTGGGTCTCTTTaGATGCAGTGTCCTTCTGAAGCCTGGAGGGTTTTA | + |
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Preference number: 3 (lower is better) Translates to: CTTGHRLHPGSL*MQCPSEAWRVL Trigger: TAAAACCCTCCAGGCTTCAGAAGGACACTGCATGCAAAGAGACCCAGGATGTAACCTATGCCCAGTTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR CCA 72 bp | TATGTTTCCAGTCCATCTTCAGTGGGTGTAGAGGACTaGTCCTTGGTTTCTGAGATCATGAGGTCTAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: YVSSPSSVGVED*SLVSEIMRSRE Trigger: CTCCCTAGACCTCATGATCTCAGAAACCAAGGACCAGTCCTCTACACCCACTGAAGATGGACTGGAAACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTTCAGCTGTTGTTCTGTTCCTGTAATGTTCCATTGTGGTaGGGAGTAACAGCATCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GLLSVLAACWFQLLFCSCNVPLW*GVTASR Trigger: TCTGGATGCTGTTACTCCCAACCACAATGGAACATT...ACAGGAACAGAACAACAGCTGAAACCAGCAAGCAGCCAACACAGAAAGAAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CAA 90 bp | GGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTTCAGCTGTTGTTCTGTTCCTGTTGCATTGTTCTCAGATaGTGTGTTCTTCACAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: GLLSVLAACWFQLLFCSCCIVLR*CVLHRS Trigger: GCTTCTGTGAAGAACACACAATCTGAGAACAATGCA...ACAGGAACAGAACAACAGCTGAAACCAGCAAGCAGCCAACACAGAAAGAAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTCCAACTGTTCAGCTCTGCATTGTTCTCAGATTGTGTGTTCTTCACAGAAGCATCTGAATGTTCCATaGTGGTTGGGAGTAACAGCA | + |
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Preference number: 3 (lower is better) Translates to: GSNCSALHCSQIVCSSQKHLNVP*WLGVTA Trigger: TGCTGTTACTCCCAACCACAATGGAACATTCAGATG...CTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCTGCATTGTTCTCAGATTGTGTGTTCTTCACAGAAGCATTAGCCTTCTTCTTGGAATGTTGAACTaGGCCTTATTCCTGGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: QLCIVLRLCVLHRSISLLLGMLN*ALFLVS Trigger: GGAAACCAGGAATAAGGCCAAGTTCAACATTCCAAG...AAGAAGGCTAATGCTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTCCAACTGTTCAGCTCTGCATTGTTCTCAGATTGTGTGTTCTTCACAGAAGTGTGCCCTGGTTACATaGTCTTTCAATTCACAATAT | + |
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Preference number: 3 (lower is better) Translates to: GSNCSALHCSQIVCSSQKCALVT*SFNSQY Trigger: ATATTGTGAATTGAAAGACAATGTAACCAGGGCACA...CTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| 3UTR TCA 72 bp | AGCACTCTCATAGTAACACTTATATATGCCTGCATATaGGGTTGTCATGCTTGGAATGTTGAACTTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: STLIVTLIYACI*GCHAWNVELGL Trigger: AAGGCCAAGTTCAACATTCCAAGCATGACAACCTCATATGCAGGCATATATAAGTGTTACTATGAGAGTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| CDS-3UTR CCA 90 bp | CCTGATGCACAACTGGGCATAGGTTACATCCTGGGTCTCTTTGCATGCAGTGTCCCAGATGATGGGCTTTaGGAGGTGTCCTGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: PDAQLGIGYILGLFACSVPDDGL*EVSCLY Trigger: GTACAGGCAGGACACCTCCCAAAGCCCATCATCTGG...GACACTGCATGCAAAGAGACCCAGGATGTAACCTATGCCCAGTTGTGCATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| CDS-3UTR TCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGCATCACTGTGCTCTaGGAAGCCAGCAGCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSFMECGVWVFFLCWLLAGITVL*EASSTL Trigger: GAGAGTGCTGCTGGCTTCTCAGAGCACAGTGATGCC...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000220182.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTCTGTTCCTGTGTCCTaGTGCACAACTGGGCATAGG | + |
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Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGSVPVS*CTTGHR Trigger: CCTATGCCCAGTTGTGCATCAGGACACAGGAACAGA...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
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| CDS-3UTR GCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCTTTGGGAGGTGTCCTaGCTGTACTGCAGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FSFMECGVWVFFLCWLLALWEVS*LYCSPG Trigger: CCCAGGACTGCAGTACAGGCAGGACACCTCCCAAAG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000218617.2 ENSMUST00000220182.2 |
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| CDS-3UTR GCA 90 bp | CCAGGACTCCAATCAAAATCTTCTGGTATGTTTCCAGTCCATCTTCAGTGGGTGCTTTGGGAGGTGTCCTaGCTGTACTGCAGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PGLQSKSSGMFPVHLQWVLWEVS*LYCSPG Trigger: CCCAGGACTGCAGTACAGGCAGGACACCTCCCAAAG...CACCCACTGAAGATGGACTGGAAACATACCAGAAGATTTTGATTGGAGTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| CDS-3UTR CCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTGTCCTTCTGAAGCCTaGAGGGTTTTACCTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGCPSEA*RVLPGR Trigger: ACGCCCAGGTAAAACCCTCCAGGCTTCAGAAGGACA...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
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| CDS-3UTR GCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTGTCCAAGAGAGGCCATaGTTTCCTTCCTGGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGVQERP*FPSWIR Trigger: TCTGATCCAGGAAGGAAAGCATGGCCTCTCTTGGAC...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
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| CDS-3UTR GCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTCTGGGTCTCTTTGCATaGAGTGTCCTTCTGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGLGLFA*SVLLKP Trigger: AGGCTTCAGAAGGACACTGCATGCAAAGAGACCCAG...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
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| CDS-3UTR CCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTCCAGATGATGGGCTTTaGGAGGTGTCCTGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAAPDDGL*EVSCLY Trigger: GTACAGGCAGGACACCTCCCAAAGCCCATCATCTGG...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000218617.2 ENSMUST00000220182.2 |
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| 3UTR CAA 72 bp | TACCTGGGCGTAGACAATTCCCTGGGGGTCTTCATTTaGTGGGTTCCAACTGTTCAGCTCTGCATTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YLGVDNSLGVFI*WVPTVQLCIVL Trigger: GAGAACAATGCAGAGCTGAACAGTTGGAACCCACAAAATGAAGACCCCCAGGGAATTGTCTACGCCCAGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| CDS-3UTR TCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGGCATCACTGTGCTCTaGGAAGCCAGCAGCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLGITVL*EASSTL Trigger: GAGAGTGCTGCTGGCTTCTCAGAGCACAGTGATGCC...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000220182.2 |
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| CDS-3UTR GCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGCTTTGGGAGGTGTCCTaGCTGTACTGCAGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLLWEVS*LYCSPG Trigger: CCCAGGACTGCAGTACAGGCAGGACACCTCCCAAAG...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000218617.2 ENSMUST00000220182.2 |
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| CDS-3UTR CCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTGGGGTCTTCATTTTGTaGGTTCCAACTGTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGGVFIL*VPTVQL Trigger: GAGCTGAACAGTTGGAACCCACAAAATGAAGACCCC...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
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| CDS-3UTR CCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTTGTCCTTCTGAAGCCTaGAGGGTTTTACCTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FSFMECGVWVFFLCWLLACPSEA*RVLPGR Trigger: ACGCCCAGGTAAAACCCTCCAGGCTTCAGAAGGACA...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| 3UTR CAA 72 bp | TCCAGTCCATCTTCAGTGGGTGTAGAGGACTGGTCCTaGGTTTCTGAGATCATGAGGTCTAGGGAGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPSSVGVEDWS*VSEIMRSRELL Trigger: AAGTAACTCCCTAGACCTCATGATCTCAGAAACCAAGGACCAGTCCTCTACACCCACTGAAGATGGACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGTCCAAGAGAGGCCATaGTTTCCTTCCTGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFMECGVWVFFLCWLLAVQERP*FPSWIR Trigger: TCTGATCCAGGAAGGAAAGCATGGCCTCTCTTGGAC...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTCTGGGTCTCTTTGCATaGAGTGTCCTTCTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAALGLFA*SVLLKP Trigger: AGGCTTCAGAAGGACACTGCATGCAAAGAGACCCAG...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTCCATGCTTTCCTTCCTaGATCAGAATGAATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGPCFPS*IRMNLP Trigger: TGGCAGATTCATTCTGATCCAGGAAGGAAAGCATGG...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTCTGAATGTTCCATTGTaGTTGGGAGTAACAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGLNVPL*LGVTAS Trigger: GGATGCTGTTACTCCCAACCACAATGGAACATTCAG...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGTGGGTGTAGAGGACTaGTCCTTGGTTTCTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: FSFMECGVWVFFLCWLLAVGVED*SLVSEI Trigger: GATCTCAGAAACCAAGGACCAGTCCTCTACACCCAC...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTGTGGGTGTAGAGGACTaGTCCTTGGTTTCTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAAVGVED*SLVSEI Trigger: GATCTCAGAAACCAAGGACCAGTCCTCTACACCCAC...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTTAGCCTTCTTTTTGTaGCCATACTGGTATCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGLAFFL*PYWYPM Trigger: CATCGGATACCAGTATGGGCACAAAAAGAAGGCTAA...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTCATCCTGGGTCTCTTTaGATGCAGTGTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAAHPGSL*MQCPSE Trigger: TTCAGAAGGACACTGCATGCAAAGAGACCCAGGATG...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCATCCTGGGTCTCTTTaGATGCAGTGTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSFMECGVWVFFLCWLLAHPGSL*MQCPSE Trigger: TTCAGAAGGACACTGCATGCAAAGAGACCCAGGATG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGTGTCCTTCTGAAGCCTaGAGGGTTTTACCTGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLCPSEA*RVLPGR Trigger: ACGCCCAGGTAAAACCCTCCAGGCTTCAGAAGGACA...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR GCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGTCCAAGAGAGGCCATaGTTTCCTTCCTGGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLVQERP*FPSWIR Trigger: TCTGATCCAGGAAGGAAAGCATGGCCTCTCTTGGAC...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR GCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGCTGGGTCTCTTTGCATaGAGTGTCCTTCTGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLLGLFA*SVLLKP Trigger: AGGCTTCAGAAGGACACTGCATGCAAAGAGACCCAG...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTCCATGCTTTCCTTCCTaGATCAGAATGAATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAAPCFPS*IRMNLP Trigger: TGGCAGATTCATTCTGATCCAGGAAGGAAAGCATGG...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCCATGCTTTCCTTCCTaGATCAGAATGAATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFMECGVWVFFLCWLLAPCFPS*IRMNLP Trigger: TGGCAGATTCATTCTGATCCAGGAAGGAAAGCATGG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTCTGAATGTTCCATTGTaGTTGGGAGTAACAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAALNVPL*LGVTAS Trigger: GGATGCTGTTACTCCCAACCACAATGGAACATTCAG...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTCTTCCTGGATCAGAATaGATCTGCCAAATACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAALPGSE*ICQILW Trigger: CCATAGTATTTGGCAGATTCATTCTGATCCAGGAAG...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTTAGCCTTCTTTTTGTaGCCATACTGGTATCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAALAFFL*PYWYPM Trigger: CATCGGATACCAGTATGGGCACAAAAAGAAGGCTAA...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 |
||
| CDS-3UTR GCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGCATCCTGGGTCTCTTTaGATGCAGTGTCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLHPGSL*MQCPSE Trigger: TTCAGAAGGACACTGCATGCAAAGAGACCCAGGATG...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGGGGTCTTCATTTTGTaGGTTCCAACTGTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLGVFIL*VPTVQL Trigger: GAGCTGAACAGTTGGAACCCACAAAATGAAGACCCC...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTAGTAACACTTATATATaGCTGCATATGAGGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFMECGVWVFFLCWLLAGSNTYI*LHMRLS Trigger: TGACAACCTCATATGCAGGCATATATAAGTGTTACT...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGCTGAATGTTCCATTGTaGTTGGGAGTAACAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLLNVPL*LGVTAS Trigger: GGATGCTGTTACTCCCAACCACAATGGAACATTCAG...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR TCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGCTTCCTGGATCAGAATaGATCTGCCAAATACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLLPGSE*ICQILW Trigger: CCATAGTATTTGGCAGATTCATTCTGATCCAGGAAG...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCCAATCAAAATCTTCTaGTATGTTTCCAGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFMECGVWVFFLCWLLAPIKIF*YVSSPS Trigger: AGATGGACTGGAAACATACCAGAAGATTTTGATTGG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 |
||
| 3UTR CAA 72 bp | GATTGTGTGTTCTTCACAGAAGCATTAGCCTTCTTTTaGTGCCCATACTGGTATCCGATGAGGATGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DCVFFTEALAFF*CPYWYPMRMRK Trigger: TTTTCTCATCCTCATCGGATACCAGTATGGGCACAAAAAGAAGGCTAATGCTTCTGTGAAGAACACACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTAGTAACACTTATATATaGCTGCATATGAGGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVFIHGMWGLGLLSVLAASNTYI*LHMRLS Trigger: TGACAACCTCATATGCAGGCATATATAAGTGTTACT...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000220182.2 |
||
| CDS-3UTR CCA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGCCAATCAAAATCTTCTaGTATGTTTCCAGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLPIKIF*YVSSPS Trigger: AGATGGACTGGAAACATACCAGAAGATTTTGATTGG...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 |
||
| 3UTR CAA 72 bp | TCTTCATTTTGTGGGTTCCAACTGTTCAGCTCTGCATaGTTCTCAGATTGTGTGTTCTTCACAGAAGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSFCGFQLFSSA*FSDCVFFTEAL Trigger: TAATGCTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACCCACAAAATGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTGGTCTAGGGAGTTACTaGGTTTTGACCACACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFMECGVWVFFLCWLLAGGLGSY*VLTTPV Trigger: CACAGGTGTGGTCAAAACCAAGTAACTCCCTAGACC...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTCTAGGGAGTTACTaGGTTTTGACCACACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSFMECGVWVFFLCWLLAGLGSY*VLTTPV Trigger: CACAGGTGTGGTCAAAACCAAGTAACTCCCTAGACC...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTCTGTTCAGCTCTGCATaGTTCTCAGATTGTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFMECGVWVFFLCWLLAGLFSSA*FSDCVF Trigger: GAACACACAATCTGAGAACAATGCAGAGCTGAACAG...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS CCA 90 bp | TGTGTGTTCTTCACAGAAGCATCATCTTCAGTGGGTGTAGAGGACTaGTCCTTGGTTTCTGAGATCATGAGGTCTAGGGAGTTACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CVFFTEASSSVGVED*SLVSEIMRSRELLG Trigger: ACCAAGTAACTCCCTAGACCTCATGATCTCAGAAACCAAGGACCAGTCCTCTACACCCACTGAAGATGATGCTTCTGTGAAGAACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTGCATTAGCCTTCTTTTaGTGCCCATACTGGTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LVFIHGMWGLGLLSVLAAALAFF*CPYWYP Trigger: CGGATACCAGTATGGGCACAAAAAGAAGGCTAATGC...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGCATTAGCCTTCTTTTaGTGCCCATACTGGTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: FSFMECGVWVFFLCWLLAALAFF*CPYWYP Trigger: CGGATACCAGTATGGGCACAAAAAGAAGGCTAATGC...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTGGTTGCATTGTTCTCAGATaGTGTGTTCTTCACAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFMECGVWVFFLCWLLAGCIVLR*CVLHRS Trigger: GCTTCTGTGAAGAACACACAATCTGAGAACAATGCA...ACCAGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCTTGGAATGTTGAACTaGGCCTTATTCCTGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSFMECGVWVFFLCWLLALGMLN*ALFLVS Trigger: GGAAACCAGGAATAAGGCCAAGTTCAACATTCCAAG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078778.5 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTAATGTTCCATTGTGGTaGGGAGTAACAGCATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVFIHGMWGLGLLSVLAANVPLW*GVTASR Trigger: TCTGGATGCTGTTACTCCCAACCACAATGGAACATT...AGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTAATGTTCCATTGTGGTaGGGAGTAACAGCATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSFMECGVWVFFLCWLLANVPLW*GVTASR Trigger: TCTGGATGCTGTTACTCCCAACCACAATGGAACATT...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCATCTGAATGTTCCATaGTGGTTGGGAGTAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSFMECGVWVFFLCWLLAHLNVP*WLGVTA Trigger: TGCTGTTACTCCCAACCACAATGGAACATTCAGATG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTCTGTTCAGCTCTGCATaGTTCTCAGATTGTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSFMECGVWVFFLCWLLALFSSA*FSDCVF Trigger: GAACACACAATCTGAGAACAATGCAGAGCTGAACAG...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGGCTGCTTGCTTGCATTGTTCTCAGATaGTGTGTTCTTCACAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSFMECGVWVFFLCWLLACIVLR*CVLHRS Trigger: GCTTCTGTGAAGAACACACAATCTGAGAACAATGCA...AGCAAGCAGCCAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
||
| CDS-3UTR CAA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGAATGTTCCATTGTGGTaGGGAGTAACAGCATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLNVPLW*GVTASR Trigger: TCTGGATGCTGTTACTCCCAACCACAATGGAACATT...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
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| CDS-3UTR CAA 90 bp | AAATCCCTAGTTTTCATTCATGGAATGTGGGGTCTGGGTCTTCTTTCTGTGTTGCTGTTCAGCTCTGCATaGTTCTCAGATTGTGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: KSLVFIHGMWGLGLLSVLLFSSA*FSDCVF Trigger: GAACACACAATCTGAGAACAATGCAGAGCTGAACAG...CAACACAGAAAGAAGACCCAGACCCCACATTCCATGAATGAAAACTAGGGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078778.5 ENSMUST00000217705.2 ENSMUST00000220182.2 |
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| CDS GCA 72 bp | CCAGATGATGGGCTTTGGGAGGTGTCCTGCCTGTACTaGAGTCCTGGGTTCCAGAATAAGACCTCACCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PDDGLWEVSCLY*SPGFQNKTSPR Trigger: CCTTGGTGAGGTCTTATTCTGGAACCCAGGACTGCAGTACAGGCAGGACACCTCCCAAAGCCCATCATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218617.2 |
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| CDS CCA 72 bp | TTCACAGAAGCATCATCTTCAGTGGGTGTAGAGGACTaGTCCTTGGTTTCTGAGATCATGAGGTCTAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FTEASSSVGVED*SLVSEIMRSRE Trigger: CTCCCTAGACCTCATGATCTCAGAAACCAAGGACCAGTCCTCTACACCCACTGAAGATGATGCTTCTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220182.2 |
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| CDS CAA 90 bp | CCCTGGGGGTCTTCATTTTGTGGGTTCCAACTGTTCAGCTCTGCATaGTTCTCAGATTGTGTGTTCTTCACAGAAGCATCATCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PWGSSFCGFQLFSSA*FSDCVFFTEASSSV Trigger: CACTGAAGATGATGCTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACCCACAAAATGAAGACCCCCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220182.2 |
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| CDS CAA 72 bp | TGGGTTCCAACTGTTCAGCTCTGCATTGTTCTCAGATaGTGTGTTCTTCACAGAAGCATCATCTTCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WVPTVQLCIVLR*CVLHRSIIFSG Trigger: CCCACTGAAGATGATGCTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220182.2 |
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| CDS CAA 72 bp | TCTTCATTTTGTGGGTTCCAACTGTTCAGCTCTGCATaGTTCTCAGATTGTGTGTTCTTCACAGAAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: SSFCGFQLFSSA*FSDCVFFTEAS Trigger: TGATGCTTCTGTGAAGAACACACAATCTGAGAACAATGCAGAGCTGAACAGTTGGAACCCACAAAATGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220182.2 |
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