Pregenerated sensors for LILRA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030427Ensembl transcript IDs: ENSMUST00000038176.15, ENSMUST00000090689.5, ENSMUST00000206077.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTGGGTTCAGAAGAGTGTTCAGGAAACAAAGGCTCCCAGTATGTaGAGGGACAGGAATTCATTTGTTGAGGAAGCACCTCATTATAAA | + |
|
Preference number: 1 (lower is better) Translates to: FWVQKSVQETKAPSM*RDRNSFVEEAPHYK Trigger: TTTATAATGAGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAGCCTTTGTTTCCTGAACACTCTTCTGAACCCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| 3UTR CAA 90 bp | TTCAGGAAACAAAGGCTCCCAGTATGTGGAGGGACAGGAATTCATTaGTTGAGGAAGCACCTCATTATAAAATTCCACTTCCCTCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: FRKQRLPVCGGTGIH*LRKHLIIKFHFPLN Trigger: GTTCAGAGGGAAGTGGAATTTTATAATGAGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAGCCTTTGTTTCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| 3UTR CCA 72 bp | CAGAAGAGTGTTCAGGAAACAAAGGCTCCCAGTATGTaGAGGGACAGGAATTCATTTGTTGAGGAAGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: QKSVQETKAPSM*RDRNSFVEEAP Trigger: AGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAGCCTTTGTTTCCTGAACACTCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGACAGCCTATTCCCTCACTTTCTGGGTTCAGAAGAGTGTTCAGGAAACAAAACAGGAATTCATTTGTaGAGGAAGCACCTCATTATA | + |
|
Preference number: 3 (lower is better) Translates to: WDSLFPHFLGSEECSGNKTGIHL*RKHLII Trigger: TATAATGAGGTGCTTCCTCAACAAATGAATTCCTGT...TTTGTTTCCTGAACACTCTTCTGAACCCAGAAAGTGAGGGAATAGGCTGTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | TGGGACAGCCTATTCCCTCACTTTCTGGGTTCAGAAGAGTGTTCAGGAAACAAACTGGTTCTCTGTGGCTaGGACTGTGAGCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WDSLFPHFLGSEECSGNKLVLCG*DCELHR Trigger: CCTGTGGAGCTCACAGTCTCAGCCACAGAGAACCAG...TTTGTTTCCTGAACACTCTTCTGAACCCAGAAAGTGAGGGAATAGGCTGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCCAGTATGTGGAGGGACAGGAATTCATTTGTTGAGGAAGCACCTCATTATGATGAGGACCACGACTaGCATCCCCATCCTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: APSMWRDRNSFVEEAPHYDEDHD*HPHPDQ Trigger: CTGATCAGGATGGGGATGGCAGTCGTGGTCCTCATC...ATAATGAGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTCAGGAAACAAAGGCTCCCAGTATGTGGAGGGACAGGAATTCATTTGTTGGGGTGGGTCTGTCTATaGCTTTGCCAAGCCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFRKQRLPVCGGTGIHLLGWVCL*LCQASV Trigger: CACTGAGGCTTGGCAAAGCCATAGACAGACCCACCC...CAACAAATGAATTCCTGTCCCTCCACATACTGGGAGCCTTTGTTTCCTGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCTCCCAGTATGTGGAGGGACAGGAATTCATTTGTTGAGGAAGCACCTCATGTCTCACAGAAGGGATaGAGAACTTGCCCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAPSMWRDRNSFVEEAPHVSQKG*RTCPCS Trigger: GGAACAAGGGCAAGTTCTTCATCCCTTCTGTGAGAC...ATGAGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTCCCAGTATGTGGAGGGACAGGAATTCATTTGTTGAGGAAGCACCTCATTATCATAGTGACCATGTaGGGCACAGTGGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLPVCGGTGIHLLRKHLIIIVTM*GTVECH Trigger: ATGACACTCCACTGTGCCTCACATGGTCACTATGAT...AATGAGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGTATGTGGAGGGACAGGAATTCATTTGTTGAGGAAGCACCTCATTATACCATGTGAGGCACAGTaGAGTGTCATCTTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVCGGTGIHLLRKHLIIPCEAQ*SVIFPP Trigger: AGGAGGGAAGATGACACTCCACTGTGCCTCACATGG...TATAATGAGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTGAGAGGGAGCTGTCCTaGGATCAGGATGTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSERELS*DQDVQG Trigger: CCCCTGGACATCCTGATCTCAGGACAGCTCCCTCTC...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR TCA 90 bp | CAACTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATGAGAGGGAGCTGTCCTaGGATCAGGATGTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLWVIRYISQSVEHRNMHERELS*DQDVQG Trigger: CCCCTGGACATCCTGATCTCAGGACAGCTCCCTCTC...ATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR TCA 90 bp | TGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTGGTTCTCTGTGGCTaGGACTGTGAGCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WVIRYISQSVEHRNMHSFLVLCG*DCELHR Trigger: CCTGTGGAGCTCACAGTCTCAGCCACAGAGAACCAG...AAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCCTGGTTCTCTGTGGCTaGGACTGTGAGCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLLVLCG*DCELHR Trigger: CCTGTGGAGCTCACAGTCTCAGCCACAGAGAACCAG...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCCTGGGCTGAAAGGCTaGGTGTCCAGTAGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVIRYISQSVEHRNMHSFPGLKG*VSSSVL Trigger: CAGGACACTACTGGACACCCAGCCTTTCAGCCCAGG...AAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCCCTGGGCTGAAAGGCTaGGTGTCCAGTAGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLPGLKG*VSSSVL Trigger: CAGGACACTACTGGACACCCAGCCTTTCAGCCCAGG...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTGGGTGGGTCTGTCTATaGCTTTGCCAAGCCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSGWVCL*LCQASV Trigger: CACTGAGGCTTGGCAAAGCCATAGACAGACCCACCC...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| 3UTR CAA 72 bp | AGGCTCCCAGTATGTGGAGGGACAGGAATTCATTTGTaGAGGAAGCACCTCATTATAAAATTCCACTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLPVCGGTGIHL*RKHLIIKFHFP Trigger: AGGGAAGTGGAATTTTATAATGAGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTAGTGACATACCCTCCTaGAGTTACCACAGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WVIRYISQSVEHRNMHSFSDIPS*SYHRAG Trigger: GCCAGCCCTGTGGTAACTTCAGGAGGGTATGTCACT...AAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR TCA 90 bp | CATTTGTTGAGGAAGCACCTCATTATAAAATTCCACTTCCCTCTGAACCCCACATGTCCTGTGAGCTGGTaGATTTCTTATCTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLRKHLIIKFHFPLNPTCPVSW*ISYLPW Trigger: CCAAGGAAGATAAGAAATTCACCAGCTCACAGGACA...TGTGGGGTTCAGAGGGAAGTGGAATTTTATAATGAGGTGCTTCCTCAACAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCGATGAGGACCACGACTaGCATCCCCATCCTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLDEDHD*HPHPDQ Trigger: CTGATCAGGATGGGGATGGCAGTCGTGGTCCTCATC...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTGGTCATTGCTCTCTTaGAGGCGATCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSWSLLS*RRSQSL Trigger: CAGGCTCTGTGATCGCCTCCAAGAGAGCAATGACCA...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTGGGTGGGTCTGTCTATaGCTTTGCCAAGCCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WVIRYISQSVEHRNMHSFGWVCL*LCQASV Trigger: CACTGAGGCTTGGCAAAGCCATAGACAGACCCACCC...AAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| 3UTR CAA 72 bp | CAAAGGCTCCCAGTATGTGGAGGGACAGGAATTCATTaGTTGAGGAAGCACCTCATTATAAAATTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLPVCGGTGIH*LRKHLIIKFHF Trigger: GAAGTGGAATTTTATAATGAGGTGCTTCCTCAACAAATGAATTCCTGTCCCTCCACATACTGGGAGCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | CAACTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATGTCTCACAGAAGGGATaGAGAACTTGCCCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLWVIRYISQSVEHRNMHVSQKG*RTCPCS Trigger: GGAACAAGGGCAAGTTCTTCATCCCTTCTGTGAGAC...ATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTCACATAGCCAAGTGTaGAGTTGGCCACAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSSHSQV*SWPQRS Trigger: GCTTCTCTGTGGCCAACTTCACACTTGGCTATGTGA...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR TCA 90 bp | CAACTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCACATAGCCAAGTGTaGAGTTGGCCACAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLWVIRYISQSVEHRNMHSHSQV*SWPQRS Trigger: GCTTCTCTGTGGCCAACTTCACACTTGGCTATGTGA...ATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CCA 90 bp | CAACTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATACCTTAGTCCACACTTaGACCACAGAGTCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLWVIRYISQSVEHRNMHTLVHT*TTESGC Trigger: ACAGCCAGACTCTGTGGTCCAAGTGTGGACTAAGGT...ATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTGCGAAGACTCACACTaGAGAGTGACATACCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSCEDSH*RVTYPP Trigger: AGGAGGGTATGTCACTCTCCAGTGTGAGTCTTCGCA...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTGGCGATCACAGAGCCTaGTTCAGCTTTGATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WVIRYISQSVEHRNMHSFGDHRA*FSFDGG Trigger: ACCACCATCAAAGCTGAACCAGGCTCTGTGATCGCC...AAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCTGGTCATTGCTCTCTTaGAGGCGATCACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLWSLLS*RRSQSL Trigger: CAGGCTCTGTGATCGCCTCCAAGAGAGCAATGACCA...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCCCATGTGAGGCACAGTaGAGTGTCATCTTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLPCEAQ*SVIFPP Trigger: AGGAGGGAAGATGACACTCCACTGTGCCTCACATGG...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCCATGTGAGGCACAGTaGAGTGTCATCTTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVIRYISQSVEHRNMHSFPCEAQ*SVIFPP Trigger: AGGAGGGAAGATGACACTCCACTGTGCCTCACATGG...AAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| 3UTR CAA 72 bp | ATTATAAAATTCCACTTCCCTCTGAACCCCACACTTTaGCTCCCTAGACATTCTATCCCAACAGTTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IIKFHFPLNPTL*LPRHSIPTVPQ Trigger: TTGAGGAACTGTTGGGATAGAATGTCTAGGGAGCAAAAGTGTGGGGTTCAGAGGGAAGTGGAATTTTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTACTCACACTGGAGAGTaGCATACCCTCCTGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSTHTGE*HTLLKL Trigger: TAACTTCAGGAGGGTATGTCACTCTCCAGTGTGAGT...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR TCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTATCATAGTGACCATGTaGGGCACAGTGGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSIIVTM*GTVECH Trigger: ATGACACTCCACTGTGCCTCACATGGTCACTATGAT...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCTGGACAGCCCTGAGATaGGTATTTGTTGGAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLWTALR*VFVGEH Trigger: GTGCTCTCCAACAAATACTCATCTCAGGGCTGTCCA...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR TCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCACTCACACTGGAGAGTaGCATACCCTCCTGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLTHTGE*HTLLKL Trigger: TAACTTCAGGAGGGTATGTCACTCTCCAGTGTGAGT...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR TCA 90 bp | TGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTATCATAGTGACCATGTaGGGCACAGTGGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVIRYISQSVEHRNMHSFIIVTM*GTVECH Trigger: ATGACACTCCACTGTGCCTCACATGGTCACTATGAT...AAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | CAACTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATCAAGAGGTAGAAAGATaGGTCTTGAGCACCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLWVIRYISQSVEHRNMHQEVER*VLSTIA Trigger: TGCTATGGTGCTCAAGACTCATCTTTCTACCTCTTG...ATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTCAAGAGGTAGAAAGATaGGTCTTGAGCACCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSQEVER*VLSTIA Trigger: TGCTATGGTGCTCAAGACTCATCTTTCTACCTCTTG...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTTGTCCTGTGAGCTGGTaGATTTCTTATCTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVIRYISQSVEHRNMHSFCPVSW*ISYLPW Trigger: CCAAGGAAGATAAGAAATTCACCAGCTCACAGGACA...AAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR TCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCCAAGAGGTAGAAAGATaGGTCTTGAGCACCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLQEVER*VLSTIA Trigger: TGCTATGGTGCTCAAGACTCATCTTTCTACCTCTTG...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTCATAACTGTAGCATCTaGATATCCATCTCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSHNCSI*ISISGW Trigger: CCAACCAGAGATGGATATGCAGATGCTACAGTTATG...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR GCA 90 bp | CAACTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATCATAACTGTAGCATCTaGATATCCATCTCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLWVIRYISQSVEHRNMHHNCSI*ISISGW Trigger: CCAACCAGAGATGGATATGCAGATGCTACAGTTATG...ATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTCTACTAGAAGATATATaGTCTGTGTCCTGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSLLEDI*SVSCEL Trigger: CAGCTCACAGGACACAGAGCATATATCTTCTAGTAG...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTACATCGATATTGACCTaGATTTCTCAGGTGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: LWVIRYISQSVEHRNMHSTSILT*ISQVYI Trigger: AATGTACACCTGAGAAATGCAGGTCAATATCGATGT...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCACATCGATATTGACCTaGATTTCTCAGGTGTACATT | + |
|
Preference number: 4 (lower is better) Translates to: VIRYISQSVEHRNMHSFLTSILT*ISQVYI Trigger: AATGTACACCTGAGAAATGCAGGTCAATATCGATGT...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS TCA 90 bp | AGGACCACGACTGCCATCCCCATCCTGATCAGATTCTCCGTTGTGTaGTCCTGGTTCTCTGTGGCTGAGACTGTGAGCTCCACAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTTTAIPILIRFSVV*SWFSVAETVSSTGA Trigger: TGCCCCTGTGGAGCTCACAGTCTCAGCCACAGAGAACCAGGATCACACAACGGAGAATCTGATCAGGATGGGGATGGCAGTCGTGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS TCA 90 bp | TCAGATTCTCCGTTGTGTGATCCTGGTTCTCTGTGGCTGAGACTGTaGGCTCCACAGGGGCACTGGCAGATGACAAGAGGTAGAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SDSPLCDPGSLWLRL*APQGHWQMTRGRKM Trigger: CATCTTTCTACCTCTTGTCATCTGCCAGTGCCCCTGTGGAGCTCACAGTCTCAGCCACAGAGAACCAGGATCACACAACGGAGAATCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR CAA 90 bp | CAACTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATCACCTTAGTCCACACTaGGACCACAGAGTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLWVIRYISQSVEHRNMHHLSPH*DHRVWL Trigger: CAGCCAGACTCTGTGGTCCAAGTGTGGACTAAGGTG...ATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CAA 90 bp | GTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTTCTCCACCTTAGTCCACACTaGGACCACAGAGTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VIRYISQSVEHRNMHSFLHLSPH*DHRVWL Trigger: CAGCCAGACTCTGTGGTCCAAGTGTGGACTAAGGTG...GAGAAAAGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTATGGTCATTGCTCTCTaGGAGGCGATCACAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LWVIRYISQSVEHRNMHSMVIAL*EAITEP Trigger: AGGCTCTGTGATCGCCTCCAAGAGAGCAATGACCAT...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS TCA 90 bp | CAGGGCTCTGTACTGTCTACTAGAAGATATATGCTCTGTGTCCTGTaGGCTGGTGAATTTCTTATCTTCCTTGGTGAGAATGAATTTATC | + |
|
Preference number: 5 (lower is better) Translates to: QGSVLSTRRYMLCVL*AGEFLIFLGENEFI Trigger: GATAAATTCATTCTCACCAAGGAAGATAAGAAATTCACCAGCTCACAGGACACAGAGCATATATCTTCTAGTAGACAGTACAGAGCCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS-3UTR CAA 90 bp | CAACTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATACAATAACAGCGATATaGCCCTGCATGTTGTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLWVIRYISQSVEHRNMHTITAI*PCMLSS Trigger: AGACGACAACATGCAGGGCAATATCGCTGTTATTGT...ATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000206077.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGTCATCAGATATATTTCCCAGAGTGTAGAACATAGAAACATGCATTCTTTCTCAGGTGTACATTaGAGAATGAGAATTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LWVIRYISQSVEHRNMHSFSGVH*RMRIQP Trigger: AGGCTGAATTCTCATTCTCAAATGTACACCTGAGAA...AGAATGCATGTTTCTATGTTCTACACTCTGGGAAATATATCTGATGACCCAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS TCA 72 bp | CCGTTGTGTGATCCTGGTTCTCTGTGGCTGAGACTGTaGGCTCCACAGGGGCACTGGCAGATGACAAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLCDPGSLWLRL*APQGHWQMTRG Trigger: ACCTCTTGTCATCTGCCAGTGCCCCTGTGGAGCTCACAGTCTCAGCCACAGAGAACCAGGATCACACAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS CCA 72 bp | TCTGAGGATAGGCTTAGGGAGGGACCCTGTCAGCACTaGGATCCAGAGCCTCAGAGTCAGTCCAAGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SEDRLREGPCQH*DPEPQSQSKTE Trigger: CTCTGTCTTGGACTGACTCTGAGGCTCTGGATCCCAGTGCTGACAGGGTCCCTCCCTAAGCCTATCCTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS CCA 72 bp | GAAGGTCACCTTAGTCCACACTTGGACCACAGAGTCTaGCTGTACTCTGAGGATAGGCTTAGGGAGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: EGHLSPHLDHRV*LYSEDRLREGP Trigger: GGGTCCCTCCCTAAGCCTATCCTCAGAGTACAGCCAGACTCTGTGGTCCAAGTGTGGACTAAGGTGACCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS TCA 72 bp | ACTGCCATCCCCATCCTGATCAGATTCTCCGTTGTGTaGTCCTGGTTCTCTGTGGCTGAGACTGTGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAIPILIRFSVV*SWFSVAETVSS Trigger: GGAGCTCACAGTCTCAGCCACAGAGAACCAGGATCACACAACGGAGAATCTGATCAGGATGGGGATGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS CAA 72 bp | TGGAGAATTCTGCCTGGGACTGCTGATCATGGGACTTaGATTTTAGTCGCAGGGGTTGCTGGGCTGATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WRILPGTADHGT*ILVAGVAGLIP Trigger: AGGGATCAGCCCAGCAACCCCTGCGACTAAAATCAAAGTCCCATGATCAGCAGTCCCAGGCAGAATTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS TCA 72 bp | ATTGGCCTCCAGTGTAGCTACTCACATAGCCAAGTGTaGAGTTGGCCACAGAGAAGCCAGTGTCAGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IGLQCSYSHSQV*SWPQRSQCQSA Trigger: AGCAGACTGACACTGGCTTCTCTGTGGCCAACTTCACACTTGGCTATGTGAGTAGCTACACTGGAGGCCAAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS CAA 90 bp | TGGGACTTTGATTTTAGTCGCAGGGGTTGCTGGGCTGATCCCTCCTaGGACAGAATGAAAGTATCCACAGAGTCCATTGACCAACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: WDFDFSRRGCWADPS*DRMKVSTESIDQHS Trigger: GCTGTGTTGGTCAATGGACTCTGTGGATACTTTCATTCTGTCCAAGGAGGGATCAGCCCAGCAACCCCTGCGACTAAAATCAAAGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS CAA 72 bp | GATTTTAGTCGCAGGGGTTGCTGGGCTGATCCCTCCTaGGACAGAATGAAAGTATCCACAGAGTCCATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DFSRRGCWADPS*DRMKVSTESID Trigger: GTCAATGGACTCTGTGGATACTTTCATTCTGTCCAAGGAGGGATCAGCCCAGCAACCCCTGCGACTAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS TCA 72 bp | TCCATGAGACCTTCTGCTGTCCTTCTACAGTTAAAATaGACCTGTGATAGCTCTGCGAAGACTCACACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SMRPSAVLLQLK*TCDSSAKTHTG Trigger: TCCAGTGTGAGTCTTCGCAGAGCTATCACAGGTTCATTTTAACTGTAGAAGGACAGCAGAAGGTCTCATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS TCA 72 bp | TTCCTTGGTGAGAATGAATTTATCATAGTGACCATGTaGGGCACAGTGGAGTGTCATCTTCCCTCCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLGENEFIIVTM*GTVECHLPSCC Trigger: ACAGCAGGAGGGAAGATGACACTCCACTGTGCCTCACATGGTCACTATGATAAATTCATTCTCACCAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS CCA 72 bp | GTAGTAACCATAACATCTGAATGCCCCTGTATGGGTTaGGGTTGTGGGTCCTATAATAAACAGGGCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VVTITSECPCMG*GCGSYNKQGSV Trigger: TACAGAGCCCTGTTTATTATAGGACCCACAACCCCAACCCATACAGGGGCATTCAGATGTTATGGTTACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS CAA 90 bp | TGTTGTAGGAACATCGATATTGACCTGCATTTCTCAGGTGTACATTaGAGAATGAGAATTCAGCCTTGTTTGCTGGCTTCTGTTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CCRNIDIDLHFSGVH*RMRIQPCLLASVCS Trigger: AGAACAAACAGAAGCCAGCAAACAAGGCTGAATTCTCATTCTCAAATGTACACCTGAGAAATGCAGGTCAATATCGATGTTCCTACAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||
| CDS TCA 72 bp | GTACTGTCTACTAGAAGATATATGCTCTGTGTCCTGTaGGCTGGTGAATTTCTTATCTTCCTTGGTGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VLSTRRYMLCVL*AGEFLIFLGEN Trigger: ATTCTCACCAAGGAAGATAAGAAATTCACCAGCTCACAGGACACAGAGCATATATCTTCTAGTAGACAGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS GCA 72 bp | ATAAACAGGGCTCTGTACTGTCTACTAGAAGATATATaGTCTGTGTCCTGTGAGCTGGTGAATTTCTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: INRALYCLLEDI*SVSCELVNFLS Trigger: AGATAAGAAATTCACCAGCTCACAGGACACAGAGCATATATCTTCTAGTAGACAGTACAGAGCCCTGTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 ENSMUST00000206077.2 |
||
| CDS CAA 72 bp | TCAGGTGTACATTTGAGAATGAGAATTCAGCCTTGTTaGCTGGCTTCTGTTTGTTCTTTGTTACGGTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SGVHLRMRIQPC*LASVCSLLRFY Trigger: ATAAAACCGTAACAAAGAACAAACAGAAGCCAGCAAACAAGGCTGAATTCTCATTCTCAAATGTACACCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038176.15 ENSMUST00000090689.5 |
||