Pregenerated sensors for LILRA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070873Ensembl transcript IDs: ENSMUST00000117550.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTCAAACCTGACTGATGAGACAGGATTATCCCCTCCTCATTATTaGAGGTGGGGAGACAGAGGAGACTGTCAGCCAAAGTTATACATC | + |
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Preference number: 1 (lower is better) Translates to: DSNLTDETGLSPPHY*RWGDRGDCQPKLYI Trigger: GATGTATAACTTTGGCTGACAGTCTCCTCTGTCTCCCCACCTCCAATAATGAGGAGGGGATAATCCTGTCTCATCAGTCAGGTTTGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCAGTATCCCCCACCAGAGAATTCTTTCAAATGCAAGTTTGTTGATTGCATCCCCTCCTCATTATTaGAGGTGGGGAGACAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSSIPHQRILSNASLLIASPPHY*RWGDRG Trigger: TCCTCTGTCTCCCCACCTCCAATAATGAGGAGGGGA...TGCAATCAACAAACTTGCATTTGAAAGAATTCTCTGGTGGGGGATACTGCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAGCAGTATCCCCCACCAGAGAATTCTTTCAAATGCAAGTTTGTTGATTGCACCTCATTATTGGAGGTaGGGAGACAGAGGAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: VSSIPHQRILSNASLLIAPHYWR*GDRGDC Trigger: ACAGTCTCCTCTGTCTCCCCACCTCCAATAATGAGG...TGCAATCAACAAACTTGCATTTGAAAGAATTCTCTGGTGGGGGATACTGCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAGCAGTATCCCCCACCAGAGAATTCTTTCAAATGCAAGTTTGTTGATTGCATTCCTGAATGTTCTCTaGAAATGGTTCCCTATTGTA | + |
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Preference number: 2 (lower is better) Translates to: VSSIPHQRILSNASLLIAFLNVL*KWFPIV Trigger: TACAATAGGGAACCATTTTCAGAGAACATTCAGGAA...TGCAATCAACAAACTTGCATTTGAAAGAATTCTCTGGTGGGGGATACTGCTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR-3UTR CCA 90 bp | TTAACTCAGGAAGACAATAGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTGGGTTCAAGAGATGCTaGGCCATCACTTACATTAGG | + |
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Preference number: 2 (lower is better) Translates to: LTQEDNSISSFHRMFRFLGFKRC*AITYIR Trigger: CCTAATGTAAGTGATGGCCCAGCATCTCTTGAACCC...AAGGAACCTGAACATTCTATGGAAAGAAGAGATACTATTGTCTTCCTGAGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR CAA 90 bp | GTCAGCAGTATCCCCCACCAGAGAATTCTTTCAAATGCAAGTTTGTaGATTGCAAGTCTTCTATTTCAAGAAAATCACATAAATAACATG | + |
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Preference number: 2 (lower is better) Translates to: VSSIPHQRILSNASL*IASLLFQENHINNM Trigger: CATGTTATTTATGTGATTTTCTTGAAATAGAAGACTTGCAATCAACAAACTTGCATTTGAAAGAATTCTCTGGTGGGGGATACTGCTGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR CAA 90 bp | CATGTCAGCAGTATCCCCCACCAGAGAATTCTTTCAAATGCAAGTTaGTTGATTGCAAGTCTTCTATTTCAAGAAAATCACATAAATAAC | + |
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Preference number: 2 (lower is better) Translates to: HVSSIPHQRILSNAS*LIASLLFQENHINN Trigger: GTTATTTATGTGATTTTCTTGAAATAGAAGACTTGCAATCAACAAACTTGCATTTGAAAGAATTCTCTGGTGGGGGATACTGCTGACATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR-3UTR GCA 90 bp | TTAACTCAGGAAGACAATAGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTTTGAGCATTATTTTTaGTATCTCAGCCAGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LTQEDNSISSFHRMFRFLFEHYF*YLSQLL Trigger: AAGAAGCTGGCTGAGATAGCAAAAATAATGCTCAAA...AAGGAACCTGAACATTCTATGGAAAGAAGAGATACTATTGTCTTCCTGAGTTAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR CCA 72 bp | CTGACTGATGAGACAGGATTATCCCCTCCTCATTATTaGAGGTGGGGAGACAGAGGAGACTGTCAGCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: LTDETGLSPPHY*RWGDRGDCQPK Trigger: CTTTGGCTGACAGTCTCCTCTGTCTCCCCACCTCCAATAATGAGGAGGGGATAATCCTGTCTCATCAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR CCA 72 bp | GATGAGACAGGATTATCCCCTCCTCATTATTGGAGGTaGGGAGACAGAGGAGACTGTCAGCCAAAGTTATAC | + |
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Preference number: 3 (lower is better) Translates to: DETGLSPPHYWR*GDRGDCQPKLY Trigger: GTATAACTTTGGCTGACAGTCTCCTCTGTCTCCCCACCTCCAATAATGAGGAGGGGATAATCCTGTCTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR-3UTR CAA 90 bp | TTAACTCAGGAAGACAATAGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTATCCCCTCCTCATTATaGGAGGTGGGGAGACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LTQEDNSISSFHRMFRFLIPSSL*EVGRQR Trigger: CCTCTGTCTCCCCACCTCCAATAATGAGGAGGGGAT...AAGGAACCTGAACATTCTATGGAAAGAAGAGATACTATTGTCTTCCTGAGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR-3UTR CAA 90 bp | TTAACTCAGGAAGACAATAGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTCTCAGCCAGCTTCTTaGTTTTCATTAGAGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: LTQEDNSISSFHRMFRFLSQPAS*FSLEKM Trigger: CATTTTCTCTAATGAAAACAAAGAAGCTGGCTGAGA...AAGGAACCTGAACATTCTATGGAAAGAAGAGATACTATTGTCTTCCTGAGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR GCA 90 bp | GTCAGCAGTATCCCCCACCAGAGAATTCTTTCAAATGCAAGTTTGTTGATTGCACTGAATTCACAACATTaGTGGGCTGGGTGGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: VSSIPHQRILSNASLLIALNSQH*WAGWTG Trigger: GCCTGTCCACCCAGCCCAGCAATGTTGTGAATTCAG...TGCAATCAACAAACTTGCATTTGAAAGAATTCTCTGGTGGGGGATACTGCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGAAAATGGTTCCCTATTGTAGTCCCAGATGTTTTCTTCCAGAACCACCTGGCAACCACCAATCCTaGCTGAACACTAAGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLKMVPYCSPRCFLPEPPGNHQS*LNTKGW Trigger: CCAACCCTTAGTGTTCAGCCAGGATTGGTGGTTGCC...AGGTGGTTCTGGAAGAAAACATCTGGGACTACAATAGGGAACCATTTTCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGAAAATGGTTCCCTATTGTAGTCCCAGATGTTTTCTTCCAGAACCACCTAATTCACAACATTGCTaGGCTGGGTGGACAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SLKMVPYCSPRCFLPEPPNSQHC*AGWTGW Trigger: CCAGCCTGTCCACCCAGCCCAGCAATGTTGTGAATT...AGGTGGTTCTGGAAGAAAACATCTGGGACTACAATAGGGAACCATTTTCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR TCA 90 bp | CTCAAATCATGTTTTCTTCCTGAATGTTCTCTGAAAATGGTTCCCTATTGTAGTAGGGTCACTGTGCTCTaGCCACCCAGTGGGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LKSCFLPECSLKMVPYCSRVTVL*PPSGGL Trigger: AAGACCCCCACTGGGTGGTCAGAGCACAGTGACCCT...ACTACAATAGGGAACCATTTTCAGAGAACATTCAGGAAGAAAACATGATTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGAAAATGGTTCCCTATTGTAGTCCCAGATGTTTTCTTCCAGAACCACCTGGTTACAGTCTCCCCTaGATTCACAACATTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLKMVPYCSPRCFLPEPPGYSLP*IHNIAG Trigger: CCCAGCAATGTTGTGAATTCAGGGGAGACTGTAACC...AGGTGGTTCTGGAAGAAAACATCTGGGACTACAATAGGGAACCATTTTCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR GCA 90 bp | AGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACAGCCTTAATTATCTCGGAGTGTTCCGTGTaGGCCAAGGATGTGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: SISSFHRMFRFLCTALIISECSV*AKDVDP Trigger: GGGGTCCACATCCTTGGCGCACACGGAACACTCCGA...GATAATTAAGGCTGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | AGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACAGCCTTAATTATCATTCCCGGGCCCCTGTaGTCACCTCACATGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SISSFHRMFRFLCTALIIIPGPL*SPHMRW Trigger: CCATCTCATGTGAGGTGACCACAGGGGCCCGGGAAT...GATAATTAAGGCTGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGAAAATGGTTCCCTATTGTAGTCCCAGATGTTTTCTTCCAGAACCACCTGTTAAATCCCAGTGTTaGGACACACTGAAGGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: SLKMVPYCSPRCFLPEPPVKSQC*DTLKGY Trigger: GTAACCCTTCAGTGTGTCTCAACACTGGGATTTAAC...AGGTGGTTCTGGAAGAAAACATCTGGGACTACAATAGGGAACCATTTTCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | CTCAAATCATGTTTTCTTCCTGAATGTTCTCTGAAAATGGTTCCCTATTGTAGTGACATGGAGGTCTCTTaGCCCAGATTCAGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LKSCFLPECSLKMVPYCSDMEVS*PRFSPR Trigger: TCTGGGGCTGAATCTGGGCCAAGAGACCTCCATGTC...ACTACAATAGGGAACCATTTTCAGAGAACATTCAGGAAGAAAACATGATTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAGACAATAGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACATCACCTGCTTCCCTTTaGCAACCACCAATCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QEDNSISSFHRMFRFLCTSPASL*QPPILA Trigger: AGCCAGGATTGGTGGTTGCCAAAGGGAAGCAGGTGA...TGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACTATTGTCTTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR TCA 90 bp | AGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACAGCCTTAATTATCACCACCAATCCTGGCTaGACACTAAGGGTTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SISSFHRMFRFLCTALIITTNPG*TLRVGL Trigger: CAAGCCAACCCTTAGTGTTCAGCCAGGATTGGTGGT...GATAATTAAGGCTGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR TCA 90 bp | AGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACAGCCTTAATTATCTGCCTTTGGCTGTGCTaGGCTTCGAACAGAAGAACG | + |
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Preference number: 4 (lower is better) Translates to: SISSFHRMFRFLCTALIICLWLC*ASNRRT Trigger: CGTTCTTCTGTTCGAAGCTCAGCACAGCCAAAGGCA...GATAATTAAGGCTGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR GCA 90 bp | AGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACAGCCTTAATTATCGCTTTCTCTCCCAGCTaGATGTTGGGTCTGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SISSFHRMFRFLCTALIIAFSPS*MLGLPL Trigger: CAAAGGCAGACCCAACATGCAGCTGGGAGAGAAAGC...GATAATTAAGGCTGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | CTCAAATCATGTTTTCTTCCTGAATGTTCTCTGAAAATGGTTCCCTATTGTAGTGCTGGGTGGACAGGCTaGGTTTACTATAGAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LKSCFLPECSLKMVPYCSAGWTG*VYYRVL Trigger: CAGGACTCTATAGTAAACCCAGCCTGTCCACCCAGC...ACTACAATAGGGAACCATTTTCAGAGAACATTCAGGAAGAAAACATGATTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | CTCAAATCATGTTTTCTTCCTGAATGTTCTCTGAAAATGGTTCCCTATTGTAGTCATTGCTGGGCTGGGTaGACAGGCTGGGTTTACTAT | + |
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Preference number: 4 (lower is better) Translates to: LKSCFLPECSLKMVPYCSHCWAG*TGWVYY Trigger: ATAGTAAACCCAGCCTGTCCACCCAGCCCAGCAATG...ACTACAATAGGGAACCATTTTCAGAGAACATTCAGGAAGAAAACATGATTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | AGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACAGCCTTAATTATCACAACATTGCTGGGCTaGGTGGACAGGCTGGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: SISSFHRMFRFLCTALIITTLLG*VDRLGL Trigger: TAAACCCAGCCTGTCCACCCAGCCCAGCAATGTTGT...GATAATTAAGGCTGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | CTCAAATCATGTTTTCTTCCTGAATGTTCTCTGAAAATGGTTCCCTATTGTAGTTCACCTCACATGAGATaGTCACCTGCTTCCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LKSCFLPECSLKMVPYCSSPHMR*SPASLW Trigger: CCAAAGGGAAGCAGGTGACCATCTCATGTGAGGTGA...ACTACAATAGGGAACCATTTTCAGAGAACATTCAGGAAGAAAACATGATTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CCA 90 bp | GTCAGCAGTATCCCCCACCAGAGAATTCTTTCAAATGCAAGTTTGTTGATTGCAATAAACTCTGATTCCTaGATCAAGGACCACTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VSSIPHQRILSNASLLIAINSDS*IKDHFC Trigger: ACAGAAGTGGTCCTTGATCCAGGAATCAGAGTTTAT...TGCAATCAACAAACTTGCATTTGAAAGAATTCTCTGGTGGGGGATACTGCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR TCA 90 bp | TTAACTCAGGAAGACAATAGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTAGAGTTTATAAACTCTaGTTCCTGGATCAAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LTQEDNSISSFHRMFRFLRVYKL*FLDQGP Trigger: TGGTCCTTGATCCAGGAATCAGAGTTTATAAACTCT...AAGGAACCTGAACATTCTATGGAAAGAAGAGATACTATTGTCTTCCTGAGTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| 3UTR CAA 72 bp | AGTATCCCCCACCAGAGAATTCTTTCAAATGCAAGTTaGTTGATTGCAAGTCTTCTATTTCAAGAAAATCAC | + |
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Preference number: 4 (lower is better) Translates to: SIPHQRILSNAS*LIASLLFQENH Trigger: GTGATTTTCTTGAAATAGAAGACTTGCAATCAACAAACTTGCATTTGAAAGAATTCTCTGGTGGGGGATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 90 bp | CTGCTTCCCTTTGGCAACCACCAATCCTGGCTGAACACTAAGGGTTaGCTTGTGCGGATTCCCTTCCGACATGGAGGTCTCTTGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLPFGNHQSWLNTKG*LVRIPFRHGGLLAQ Trigger: CTGGGCCAAGAGACCTCCATGTCGGAAGGGAATCCGCACAAGCCAACCCTTAGTGTTCAGCCAGGATTGGTGGTTGCCAAAGGGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS TCA 90 bp | CTCTTTATAAAGACGGTATTCCCGGGCCCCTGTGGTCACCTCACATaGGATGGTCACCTGCTTCCCTTTGGCAACCACCAATCCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LFIKTVFPGPCGHLT*DGHLLPFGNHQSWL Trigger: CAGCCAGGATTGGTGGTTGCCAAAGGGAAGCAGGTGACCATCTCATGTGAGGTGACCACAGGGGCCCGGGAATACCGTCTTTATAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS GCA 90 bp | CCAGGTGTCTGCCACCATGAAAGAAGCACTGCTTTCTCTCCCAGCTaGATGTTGGGTCTGCCTTTGGCTGTGCTGAGCTTCGAACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: PGVCHHERSTAFSPS*MLGLPLAVLSFEQK Trigger: CTTCTGTTCGAAGCTCAGCACAGCCAAAGGCAGACCCAACATGCAGCTGGGAGAGAAAGCAGTGCTTCTTTCATGGTGGCAGACACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 90 bp | TATAAAGACGGTATTCCCGGGCCCCTGTGGTCACCTCACATGAGATaGTCACCTGCTTCCCTTTGGCAACCACCAATCCTGGCTGAACAC | + |
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Preference number: 5 (lower is better) Translates to: YKDGIPGPLWSPHMR*SPASLWQPPILAEH Trigger: GTGTTCAGCCAGGATTGGTGGTTGCCAAAGGGAAGCAGGTGACCATCTCATGTGAGGTGACCACAGGGGCCCGGGAATACCGTCTTTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 90 bp | CAGTCTCCCCTGAATTCACAACATTGCTGGGCTGGGTGGACAGGCTaGGTTTACTATAGAGTCCTGTCACTGCAAGCTCTAGAGGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: QSPLNSQHCWAGWTG*VYYRVLSLQALEGH Trigger: GTGACCCTCTAGAGCTTGCAGTGACAGGACTCTATAGTAAACCCAGCCTGTCCACCCAGCCCAGCAATGTTGTGAATTCAGGGGAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS TCA 90 bp | GGGGCTGTGAGACTGTCTTTGGGTCTGATATGTTTGGTGATGGCCTaGGGGGCTGATCGGCTTCTGACACATGTATTTCCAAGAGATCGC | + |
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Preference number: 5 (lower is better) Translates to: GAVRLSLGLICLVMA*GADRLLTHVFPRDR Trigger: GCGATCTCTTGGAAATACATGTGTCAGAAGCCGATCAGCCCCTCAGGCCATCACCAAACATATCAGACCCAAAGACAGTCTCACAGCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS TCA 90 bp | GAGACTGTCTTTGGGTCTGATATGTTTGGTGATGGCCTGAGGGGCTaGTCGGCTTCTGACACATGTATTTCCAAGAGATCGCTGGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: ETVFGSDMFGDGLRG*SASDTCISKRSLGS Trigger: GGAACCCAGCGATCTCTTGGAAATACATGTGTCAGAAGCCGATCAGCCCCTCAGGCCATCACCAAACATATCAGACCCAAAGACAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS TCA 90 bp | CTGCTTTCTCTCCCAGCTGCATGTTGGGTCTGCCTTTGGCTGTGCTaGGCTTCGAACAGAAGAACGCCAAGAAGCACAAGGACCAAAATT | + |
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Preference number: 5 (lower is better) Translates to: LLSLPAACWVCLWLC*ASNRRTPRSTRTKI Trigger: AATTTTGGTCCTTGTGCTTCTTGGCGTTCTTCTGTTCGAAGCTCAGCACAGCCAAAGGCAGACCCAACATGCAGCTGGGAGAGAAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGAAAATGGTTCCCTATTGTAGTCCCAGATGTTTTCTTCCAGAACCACCTCCTGAATTCACAACATaGCTGGGCTGGGTGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: SLKMVPYCSPRCFLPEPPPEFTT*LGWVDR Trigger: CCTGTCCACCCAGCCCAGCAATGTTGTGAATTCAGG...AGGTGGTTCTGGAAGAAAACATCTGGGACTACAATAGGGAACCATTTTCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 90 bp | AATAGGCCCTGGAATTGCCCCGTAGAGTTTATAAACTCTGATTCCTaGATCAAGGACCACTTCTGTTCTCCTTCCTTGGTCAGAACAAAC | + |
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Preference number: 5 (lower is better) Translates to: NRPWNCPVEFINSDS*IKDHFCSPSLVRTN Trigger: GTTTGTTCTGACCAAGGAAGGAGAACAGAAGTGGTCCTTGATCCAGGAATCAGAGTTTATAAACTCTACGGGGCAATTCCAGGGCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGACAATAGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACAGTCACCTGCTTCCCTTaGGCAACCACCAATCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: QEDNSISSFHRMFRFLCTVTCFP*ATTNPG Trigger: GCCAGGATTGGTGGTTGCCAAAGGGAAGCAGGTGAC...TGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACTATTGTCTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS-3UTR CAA 90 bp | AGTATCTCTTCTTTCCATAGAATGTTCAGGTTCCTTTGTACAGCCTTAATTATCATGTTGGGTCTGCCTTaGGCTGTGCTGAGCTTCGAA | + |
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Preference number: 5 (lower is better) Translates to: SISSFHRMFRFLCTALIIMLGLP*AVLSFE Trigger: TTCGAAGCTCAGCACAGCCAAAGGCAGACCCAACAT...GATAATTAAGGCTGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 72 bp | GGTATTCCCGGGCCCCTGTGGTCACCTCACATGAGATaGTCACCTGCTTCCCTTTGGCAACCACCAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: GIPGPLWSPHMR*SPASLWQPPIL Trigger: CAGGATTGGTGGTTGCCAAAGGGAAGCAGGTGACCATCTCATGTGAGGTGACCACAGGGGCCCGGGAATACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS TCA 72 bp | AAGACGGTATTCCCGGGCCCCTGTGGTCACCTCACATaGGATGGTCACCTGCTTCCCTTTGGCAACCACCAA | + |
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Preference number: 6 (lower is better) Translates to: KTVFPGPCGHLT*DGHLLPFGNHQ Trigger: TTGGTGGTTGCCAAAGGGAAGCAGGTGACCATCTCATGTGAGGTGACCACAGGGGCCCGGGAATACCGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 72 bp | GATGGTCACCTGCTTCCCTTTGGCAACCACCAATCCTaGCTGAACACTAAGGGTTGGCTTGTGCGGATTCCC | + |
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Preference number: 6 (lower is better) Translates to: DGHLLPFGNHQS*LNTKGWLVRIP Trigger: GGGAATCCGCACAAGCCAACCCTTAGTGTTCAGCCAGGATTGGTGGTTGCCAAAGGGAAGCAGGTGACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS GCA 72 bp | TGCCACCATGAAAGAAGCACTGCTTTCTCTCCCAGCTaGATGTTGGGTCTGCCTTTGGCTGTGCTGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: CHHERSTAFSPS*MLGLPLAVLSF Trigger: GAAGCTCAGCACAGCCAAAGGCAGACCCAACATGCAGCTGGGAGAGAAAGCAGTGCTTCTTTCATGGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 72 bp | TTTGGCAACCACCAATCCTGGCTGAACACTAAGGGTTaGCTTGTGCGGATTCCCTTCCGACATGGAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: FGNHQSWLNTKG*LVRIPFRHGGL Trigger: GAGACCTCCATGTCGGAAGGGAATCCGCACAAGCCAACCCTTAGTGTTCAGCCAGGATTGGTGGTTGCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CAA 72 bp | ACTGCTTTCTCTCCCAGCTGCATGTTGGGTCTGCCTTaGGCTGTGCTGAGCTTCGAACAGAAGAACGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TAFSPSCMLGLP*AVLSFEQKNAK Trigger: CTTGGCGTTCTTCTGTTCGAAGCTCAGCACAGCCAAAGGCAGACCCAACATGCAGCTGGGAGAGAAAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 72 bp | CTGAATTCACAACATTGCTGGGCTGGGTGGACAGGCTaGGTTTACTATAGAGTCCTGTCACTGCAAGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: LNSQHCWAGWTG*VYYRVLSLQAL Trigger: TAGAGCTTGCAGTGACAGGACTCTATAGTAAACCCAGCCTGTCCACCCAGCCCAGCAATGTTGTGAATTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS TCA 72 bp | TTTGGGTCTGATATGTTTGGTGATGGCCTGAGGGGCTaGTCGGCTTCTGACACATGTATTTCCAAGAGATCG | + |
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Preference number: 6 (lower is better) Translates to: FGSDMFGDGLRG*SASDTCISKRS Trigger: CGATCTCTTGGAAATACATGTGTCAGAAGCCGATCAGCCCCTCAGGCCATCACCAAACATATCAGACCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS TCA 72 bp | AGACTGTCTTTGGGTCTGATATGTTTGGTGATGGCCTaGGGGGCTGATCGGCTTCTGACACATGTATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RLSLGLICLVMA*GADRLLTHVFP Trigger: TGGAAATACATGTGTCAGAAGCCGATCAGCCCCTCAGGCCATCACCAAACATATCAGACCCAAAGACAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS CCA 72 bp | TGGAATTGCCCCGTAGAGTTTATAAACTCTGATTCCTaGATCAAGGACCACTTCTGTTCTCCTTCCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: WNCPVEFINSDS*IKDHFCSPSLV Trigger: GACCAAGGAAGGAGAACAGAAGTGGTCCTTGATCCAGGAATCAGAGTTTATAAACTCTACGGGGCAATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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| CDS TCA 72 bp | AGAACAAACCTGTTAAATCCCAGTGTTGAGACACACTaGAGGGTTACAGTCTCCCCTGAATTCACAACATTG | + |
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Preference number: 6 (lower is better) Translates to: RTNLLNPSVETH*RVTVSPEFTTL Trigger: CAATGTTGTGAATTCAGGGGAGACTGTAACCCTTCAGTGTGTCTCAACACTGGGATTTAACAGGTTTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117550.2 |
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