Pregenerated sensors for LIG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049717Ensembl transcript IDs: ENSMUST00000095476.6, ENSMUST00000170033.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGAGGCACTGGAGGCTGGTTTTCAACCTCCATGAGAATCATGTaGAAGTGGGTTCTCACACAGATAAAGGATATTGATGAACTTGAC | + |
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Preference number: 1 (lower is better) Translates to: PGGTGGWFSTSMRIM*KWVLTQIKDIDELD Trigger: GTCAAGTTCATCAATATCCTTTATCTGTGTGAGAACCCACTTCCACATGATTCTCATGGAGGTTGAAAACCAGCCTCCAGTGCCTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR CCA 90 bp | GGCACTGGAGGCTGGTTTTCAACCTCCATGAGAATCATGTGGAAGTaGGTTCTCACACAGATAAAGGATATTGATGAACTTGACAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: GTGGWFSTSMRIMWK*VLTQIKDIDELDRV Trigger: CACTCTGTCAAGTTCATCAATATCCTTTATCTGTGTGAGAACCCACTTCCACATGATTCTCATGGAGGTTGAAAACCAGCCTCCAGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR TCA 90 bp | GTAATAAGACACACTAGGTGCATTAAATGGAGTGCTGTGCTGCAATaGAAAATGATGAGGTCCTTTTGTGGCCTGCAAGTATTCTCACAA | + |
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Preference number: 1 (lower is better) Translates to: VIRHTRCIKWSAVLQ*KMMRSFCGLQVFSQ Trigger: TTGTGAGAATACTTGCAGGCCACAAAAGGACCTCATCATTTTTCATTGCAGCACAGCACTCCATTTAATGCACCTAGTGTGTCTTATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGTACTGGGACAAGAGCGATGGCTCACTCCTACAGTCTCAGTACTTGGGAATTTCAGTACTGCCATaGAAGTACAATTCTCAACAG | + |
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Preference number: 2 (lower is better) Translates to: QVYWDKSDGSLLQSQYLGISVLP*KYNSQQ Trigger: CTGTTGAGAATTGTACTTCCATGGCAGTACTGAAAT...TCCCAAGTACTGAGACTGTAGGAGTGAGCCATCGCTCTTGTCCCAGTACACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR-3UTR TCA 90 bp | GTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTAATGACATTATTACATACAAGCACTTCTTaGAGCCATAGTTATAAGTCG | + |
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Preference number: 2 (lower is better) Translates to: VNSQPPGHCLTQRVMTLLHTSTS*SHSYKS Trigger: CGACTTATAACTATGGCTTCAAGAAGTGCTTGTATG...TAATAATGTCATTACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR-3UTR CCA 90 bp | GTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTAATGACATTATTATACAATGAAGGCTACTaGCTATTTCATCATCACTGT | + |
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Preference number: 2 (lower is better) Translates to: VNSQPPGHCLTQRVMTLLYNEGY*LFHHHC Trigger: ACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTA...TAATAATGTCATTACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR CCA 72 bp | CAGAGCACCCAGTCTCTAATGAAAGTGTTCACTGTATaGACAGCTACGCAATGGATCATCGATAGGAGACAA | + |
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Preference number: 3 (lower is better) Translates to: QSTQSLMKVFTV*TATQWIIDRRQ Trigger: TTGTCTCCTATCGATGATCCATTGCGTAGCTGTCCATACAGTGAACACTTTCATTAGAGACTGGGTGCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR TCA 72 bp | CACACTAGGTGCATTAAATGGAGTGCTGTGCTGCAATaGAAAATGATGAGGTCCTTTTGTGGCCTGCAAGTA | + |
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Preference number: 3 (lower is better) Translates to: HTRCIKWSAVLQ*KMMRSFCGLQV Trigger: TACTTGCAGGCCACAAAAGGACCTCATCATTTTTCATTGCAGCACAGCACTCCATTTAATGCACCTAGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR CCA 72 bp | ACTGGAGGCTGGTTTTCAACCTCCATGAGAATCATGTaGAAGTGGGTTCTCACACAGATAAAGGATATTGAT | + |
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Preference number: 3 (lower is better) Translates to: TGGWFSTSMRIM*KWVLTQIKDID Trigger: ATCAATATCCTTTATCTGTGTGAGAACCCACTTCCACATGATTCTCATGGAGGTTGAAAACCAGCCTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| 3UTR TCA 72 bp | TATGTTCTGGTTGATAACAAATGCATACAGACCAGGTaGAAGATTTATCACAGTACTGGACAGGAAAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: YVLVDNKCIQTR*KIYHSTGQEKK Trigger: TTTCTTTTCCTGTCCAGTACTGTGATAAATCTTTCACCTGGTCTGTATGCATTTGTTATCAACCAGAACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR CCA 90 bp | GAGGAGCAACACTGTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTGTGGGAAGCGCAGGGTaGAGCCAGTCTTGTACATGT | + |
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Preference number: 4 (lower is better) Translates to: EEQHCKFPATRTLPHTKSVGSAG*SQSCTC Trigger: ACATGTACAAGACTGGCTCCACCCTGCGCTTCCCAC...ACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTACAGTGTTGCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR GCA 90 bp | GGGAGGTTAGAGGAGCAACACTGTAAATTCCCAGCCACCAGGACACTGCCTCACCGAATCAGCCATTTTTaGTCCAGTGCTGAACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GRLEEQHCKFPATRTLPHRISHF*SSAELW Trigger: CCAGAGTTCAGCACTGGAGCAAAAATGGCTGATTCG...GTGAGGCAGTGTCCTGGTGGCTGGGAATTTACAGTGTTGCTCCTCTAACCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR TCA 90 bp | GGGAGGTTAGAGGAGCAACACTGTAAATTCCCAGCCACCAGGACACTGCCTCACCGAGCATGGTTTCTTTaGTTCCATAAGCCATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GRLEEQHCKFPATRTLPHRAWFL*FHKPSS Trigger: AGAGGATGGCTTATGGAATCAAAGAAACCATGCTCG...GTGAGGCAGTGTCCTGGTGGCTGGGAATTTACAGTGTTGCTCCTCTAACCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR GCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGAGTCCCCAGCATCCGTaGGAGCTCCACTGGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLSPQHP*ELHWGF Trigger: GAACCCCCAGTGGAGCTCGCACGGATGCTGGGGACT...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | TTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTAGTCCCCAGCATCCGTaGGAGCTCCACTGGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LGDTMKATGYFIITVCCCSPQHP*ELHWGF Trigger: GAACCCCCAGTGGAGCTCGCACGGATGCTGGGGACT...ACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | GTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTAATGACATTATTAGCTTTCCCCCTCAGCTaGTCCAAGTCACCCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VNSQPPGHCLTQRVMTLLAFPLS*SKSPSV Trigger: GACACTGGGTGACTTGGAGCAGCTGAGGGGGAAAGC...TAATAATGTCATTACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR CCA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACCCTGTCACCAGGAGGTaGTGTCTCTGCCACTGCACA | + |
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Preference number: 4 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDPVTRR*CLCHCT Trigger: TGTGCAGTGGCAGAGACACCACCTCCTGGTGACAGG...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR CCA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGCCTGTCACCAGGAGGTaGTGTCTCTGCCACTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLPVTRR*CLCHCT Trigger: TGTGCAGTGGCAGAGACACCACCTCCTGGTGACAGG...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR TCA 90 bp | TTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTACCACCTTTGCTCCATaGAACCGCAGCTCAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGDTMKATGYFIITVCCCTTFAP*NRSSRA Trigger: AGCCCTTGAGCTGCGGTTTCATGGAGCAAAGGTGGT...ACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCCCTACAGAGGGGTCATaGAGCTGCCTGCAGACCTTT | + |
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Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCPTEGS*SCLQTF Trigger: AAAGGTCTGCAGGCAGCTGCATGACCCCTCTGTAGG...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGCCTACAGAGGGGTCATaGAGCTGCCTGCAGACCTTT | + |
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Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLPTEGS*SCLQTF Trigger: AAAGGTCTGCAGGCAGCTGCATGACCCCTCTGTAGG...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | GTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTAATGACATTATTATCACGGGCAAAATGCTaGTTTGTCGACGGGCACATG | + |
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Preference number: 4 (lower is better) Translates to: VNSQPPGHCLTQRVMTLLSRAKC*FVDGHM Trigger: CATGTGCCCGTCGACAAAGCAGCATTTTGCCCGTGA...TAATAATGTCATTACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR GCA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACTCACGGGCAAAATGCTaGTTTGTCGACGGGCACATG | + |
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Preference number: 4 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDSRAKC*FVDGHM Trigger: CATGTGCCCGTCGACAAAGCAGCATTTTGCCCGTGA...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGGTGGGAAGCGCAGGGTaGAGCCAGTCTTGTACATGT | + |
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Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLVGSAG*SQSCTC Trigger: ACATGTACAAGACTGGCTCCACCCTGCGCTTCCCAC...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGCAACACTGTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTGGTGGAGATTTCTTATaGAAAGGCTTCCAGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: EEQHCKFPATRTLPHTKSGGDFL*KGFQYF Trigger: AAAATACTGGAAGCCTTTTCATAAGAAATCTCCACC...ACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTACAGTGTTGCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR TCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGGTCGACGGGCACATGTaGATCATAAAGCGAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLVDGHM*IIKRGC Trigger: GCAACCTCGCTTTATGATTCACATGTGCCCGTCGAC...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR TCA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGGTCGACGGGCACATGTaGATCATAAAGCGAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLVDGHM*IIKRGC Trigger: GCAACCTCGCTTTATGATTCACATGTGCCCGTCGAC...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACGGGGACGATCTCAGCTaGCTTGATCTGAACAATGAC | + |
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Preference number: 4 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDGDDLS*LDLNND Trigger: GTCATTGTTCAGATCAAGGCAGCTGAGATCGTCCCC...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | TTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCGCTTTCCCCCTCAGCTaGTCCAAGTCACCCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: FEVLGDTMKATGYFIITVAFPLS*SKSPSV Trigger: GACACTGGGTGACTTGGAGCAGCTGAGGGGGAAAGC...GACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR CCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCAGTGTGGAATACAGATaGCCTGTCACCAGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCSVEYR*PVTRRW Trigger: CCACCTCCTGGTGACAGGCCATCTGTATTCCACACT...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR TCA 90 bp | ACAGACCAGGTGAAAGATTTATCACAGTACTGGACAGGAAAAGAAAAATGTGAAACCACCTTTGCTCCATaGAACCGCAGCTCAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TDQVKDLSQYWTGKEKCETTFAP*NRSSRA Trigger: AGCCCTTGAGCTGCGGTTTCATGGAGCAAAGGTGGT...TTCACATTTTTCTTTTCCTGTCCAGTACTGTGATAAATCTTTCACCTGGTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR GCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGCCATCTTTGTGCATCTaGATGCGCTCACCATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLPSLCI*MRSPSS Trigger: GCTTGATGGTGAGCGCATGCAGATGCACAAAGATGG...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | TTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCCATCTTTGTGCATCTaGATGCGCTCACCATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LGDTMKATGYFIITVCCCPSLCI*MRSPSS Trigger: GCTTGATGGTGAGCGCATGCAGATGCACAAAGATGG...ACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCAGGAGGTGGTGTCTCTaGCACTGCACACAAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCRRWCL*HCTQKV Trigger: CACTTTTTGTGTGCAGTGGCAGAGACACCACCTCCT...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | CACATCCCTCCATTTCAGTACTGCCATGGAAGTACAATTCTCAACAGATACAATGGGGACGATCTCAGCTaGCTTGATCTGAACAATGAC | + |
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Preference number: 4 (lower is better) Translates to: HIPPFQYCHGSTILNRYNGDDLS*LDLNND Trigger: GTCATTGTTCAGATCAAGGCAGCTGAGATCGTCCCC...ATTGTATCTGTTGAGAATTGTACTTCCATGGCAGTACTGAAATGGAGGGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR CCA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGACACGGCACAGAGTGTaGAATACAGATGGCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLTRHRV*NTDGLS Trigger: TGACAGGCCATCTGTATTCCACACTCTGTGCCGTGT...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR CCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTCTTGTACATGTCACTaGGGACGATCTCAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCSCTCH*GRSQLP Trigger: AGGCAGCTGAGATCGTCCCCAGTGACATGTACAAGA...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR TCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTCTGCAAAGGGGACATaGGCTGCAACAGTTTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCSAKGT*AATVCE Trigger: TTCACAAACTGTTGCAGCTCATGTCCCCTTTGCAGA...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR TCA 90 bp | TTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTTTTCCAGATCTGTGGTaGCGTTGTGCAACTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: LGDTMKATGYFIITVCCCFPDLW*RCATQL Trigger: CAGTTGAGTTGCACAACGTCACCACAGATCTGGAAA...ACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR TCA 90 bp | GTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTAATGACATTATTAACAATGACAGAGTTCTaGGGCTCTATGTACACTTCC | + |
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Preference number: 4 (lower is better) Translates to: VNSQPPGHCLTQRVMTLLTMTEF*GSMYTS Trigger: GGAAGTGTACATAGAGCCTCAGAACTCTGTCATTGT...TAATAATGTCATTACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR TCA 90 bp | GTTCTCACACAGATAAAGGATATTGATGAACTTGACAGAGTGAGAGAAAAGCAGAATGTCGAAACATACTaGGAGGAGAGTGGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VLTQIKDIDELDRVREKQNVETY*EESGPR Trigger: CCTGGGACCACTCTCCTCTCAGTATGTTTCGACATT...CTGCTTTTCTCTCACTCTGTCAAGTTCATCAATATCCTTTATCTGTGTGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR GCA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACTGGTGTCTCTGCCACTaGACACAAAAAGTGAGACAT | + |
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Preference number: 4 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDWCLCH*TQKVRH Trigger: ATGTCTCACTTTTTGTGTGCAGTGGCAGAGACACCA...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR GCA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACTCTTCAGGAGTCTGCTaGTCACTGGGTTTAATTCCT | + |
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Preference number: 4 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDSSGVC*SLGLIP Trigger: AGGAATTAAACCCAGTGAGCAGCAGACTCCTGAAGA...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR CCA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGCGCATTGTGAATAAATaGGGTGAGAGAGCCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLRIVNK*GERAFL Trigger: CAGGAAGGCTCTCTCACCCCATTTATTCACAATGCG...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS-3UTR CCA 90 bp | GTTCTCACACAGATAAAGGATATTGATGAACTTGACAGAGTGAGAGAAAAGCAGTCTTGTACATGTCACTaGGGACGATCTCAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VLTQIKDIDELDRVREKQSCTCH*GRSQLP Trigger: AGGCAGCTGAGATCGTCCCCAGTGACATGTACAAGA...CTGCTTTTCTCTCACTCTGTCAAGTTCATCAATATCCTTTATCTGTGTGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
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| CDS-3UTR TCA 90 bp | GTTCTCACACAGATAAAGGATATTGATGAACTTGACAGAGTGAGAGAAAAGCAGTTTCCAGATCTGTGGTaGCGTTGTGCAACTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLTQIKDIDELDRVREKQFPDLW*RCATQL Trigger: CAGTTGAGTTGCACAACGTCACCACAGATCTGGAAA...CTGCTTTTCTCTCACTCTGTCAAGTTCATCAATATCCTTTATCTGTGTGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGAGGCTTCCAGTATTTTaGCAATTTCAAGCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLRLPVF*QFQAQV Trigger: GACCTGGGCTTGAAATTGGCAAAATACTGGAAGCCT...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCAGGCTTCCAGTATTTTaGCAATTTCAAGCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCRLPVF*QFQAQV Trigger: GACCTGGGCTTGAAATTGGCAAAATACTGGAAGCCT...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTCTTCAGGAGTCTGCTaGTCACTGGGTTTAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCSSGVC*SLGLIP Trigger: AGGAATTAAACCCAGTGAGCAGCAGACTCCTGAAGA...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATAGTGTGGAATACAGATaGCCTGTCACCAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYSVEYR*PVTRRW Trigger: CCACCTCCTGGTGACAGGCCATCTGTATTCCACACT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | GTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTAATGACATTATTAGTATGTATCCGGGCCTaGATTCTGTACTATATAACC | + |
|
Preference number: 4 (lower is better) Translates to: VNSQPPGHCLTQRVMTLLVCIRA*ILYYIT Trigger: GGTTATATAGTACAGAATCCAGGCCCGGATACATAC...TAATAATGTCATTACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAAGAGTACCCAGCAGCTTATGTTCTGGTTGATAACAAATGCATACAGACTAACTGGGGGAGAATaGGTCTCATTGCAGGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKKSTQQLMFWLITNAYRLTGGE*VSLQGK Trigger: TTTACCCTGCAATGAGACTCATTCTCCCCCAGTTAG...TCTGTATGCATTTGTTATCAACCAGAACATAAGCTGCTGGGTACTCTTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR TCA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACCTCTGGGTTATTAACTaGAGAAGGCTCTTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDLWVIN*RRLFFT Trigger: AGTGAAAAAGAGCCTTCTTCAGTTAATAACCCAGAG...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTCACACAGATAAAGGATATTGATGAACTTGACAGAGTGAGAGAAAAGCAGACTCTTTGTCATCTCTaGTCTTTTCGATGCGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTQIKDIDELDRVREKQTLCHL*SFRCVG Trigger: TCCCACGCATCGAAAAGATCAGAGATGACAAAGAGT...CTGCTTTTCTCTCACTCTGTCAAGTTCATCAATATCCTTTATCTGTGTGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR TCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGAAAGCCACTCGGGCTTaGCAACATCATTTTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLKATRA*QHHFYL Trigger: CAGATAAAAATGATGTTGTCAAGCCCGAGTGGCTTT...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATAATGTCGAAACATACTaGGAGGAGAGTGGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYNVETY*EESGPR Trigger: CCTGGGACCACTCTCCTCTCAGTATGTTTCGACATT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGAAAAGTGAGACATCATaGCACCTCGTGAACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLKSETS*HLVNLY Trigger: GTAAAGGTTCACGAGGTGGCATGATGTCTCACTTTT...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATAGGAGGTGGTGTCTCTaGCACTGCACACAAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYRRWCL*HCTQKV Trigger: CACTTTTTGTGTGCAGTGGCAGAGACACCACCTCCT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGAGTGTCATACATTCGTaGCACTCTTTGTCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLSVIHS*HSLSSL Trigger: CAGAGATGACAAAGAGTGGCACGAATGTATGACACT...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGAGTGTCATACATTCGTaGCACTCTTTGTCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLSVIHS*HSLSSL Trigger: CAGAGATGACAAAGAGTGGCACGAATGTATGACACT...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAAGAGTACCCAGCAGCTTATGTTCTGGTTGATAACAAATGCATACAGACGCATTGTGAATAAATaGGGTGAGAGAGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKKSTQQLMFWLITNAYRRIVNK*GERAFL Trigger: CAGGAAGGCTCTCTCACCCCATTTATTCACAATGCG...TCTGTATGCATTTGTTATCAACCAGAACATAAGCTGCTGGGTACTCTTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR CCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTTCACCTCTTTTGTCTaGCTTGTAAATGGACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCFTSFV*LVNGQR Trigger: CCTCTGTCCATTTACAAGCCAGACAAAAGAGGTGAA...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTTCACCTCTTTTGTCTaGCTTGTAAATGGACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLFTSFV*LVNGQR Trigger: CCTCTGTCCATTTACAAGCCAGACAAAAGAGGTGAA...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATACACGGCACAGAGTGTaGAATACAGATGGCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYTRHRV*NTDGLS Trigger: TGACAGGCCATCTGTATTCCACACTCTGTGCCGTGT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCCATAGAGTTCTTTCATaGTGTAACCAGACCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCHRVLS*CNQTQH Trigger: GTGTTGGGTCTGGTTACACCATGAAAGAACTCTATG...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | AATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCTCTGCAAAGGGGACATaGGCTGCAACAGTTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPFEVLGDTMKATGYFIISAKGT*AATVCE Trigger: TTCACAAACTGTTGCAGCTCATGTCCCCTTTGCAGA...GATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATCTAACTGGGGGAGAATaGGTCTCATTGCAGGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYLTGGE*VSLQGK Trigger: TTTACCCTGCAATGAGACTCATTCTCCCCCAGTTAG...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCCTCTGGGTTATTAACTaGAGAAGGCTCTTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EVLGDTMKATGYFIITVCLWVIN*RRLFFT Trigger: AGTGAAAAAGAGCCTTCTTCAGTTAATAACCCAGAG...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | GTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTAATGACATTATTAATATTGTTTGCTGACTaGTGCCAAGCTTTAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNSQPPGHCLTQRVMTLLILFAD*CQALSL Trigger: AAGACTTAAAGCTTGGCATCAGTCAGCAAACAATAT...TAATAATGTCATTACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR TCA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACGGTGGAGATTTCTTATaGAAAGGCTTCCAGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDGGDFL*KGFQYF Trigger: AAAATACTGGAAGCCTTTTCATAAGAAATCTCCACC...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | CACATCCCTCCATTTCAGTACTGCCATGGAAGTACAATTCTCAACAGATACAATGTTGTGCAACTCAACTaGATCATTGTGGAAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HIPPFQYCHGSTILNRYNVVQLN*IIVENG Trigger: TCCATTTTCCACAATGATGCAGTTGAGTTGCACAAC...ATTGTATCTGTTGAGAATTGTACTTCCATGGCAGTACTGAAATGGAGGGATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR GCA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGGTTGTGCAACTCAACTaGATCATTGTGGAAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLVVQLN*IIVENG Trigger: TCCATTTTCCACAATGATGCAGTTGAGTTGCACAAC...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGGTGTCTCTGCCACTaGACACAAAAAGTGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: FEVLGDTMKATGYFIITVWCLCH*TQKVRH Trigger: ATGTCTCACTTTTTGTGTGCAGTGGCAGAGACACCA...GACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | CACATCCCTCCATTTCAGTACTGCCATGGAAGTACAATTCTCAACAGATACAATATTTCTTCAGGAGTCTaGTGCTCACTGGGTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: HIPPFQYCHGSTILNRYNISSGV*CSLGLI Trigger: AATTAAACCCAGTGAGCAGCAGACTCCTGAAGAAAT...ATTGTATCTGTTGAGAATTGTACTTCCATGGCAGTACTGAAATGGAGGGATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR GCA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGATTTCTTCAGGAGTCTaGTGCTCACTGGGTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLISSGV*CSLGLI Trigger: AATTAAACCCAGTGAGCAGCAGACTCCTGAAGAAAT...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCCAAAGTATGCAATCATaGCAAAGTCCCCAGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: NPFEVLGDTMKATGYFIIQSMQS*QSPQHP Trigger: CGGATGCTGGGGACTTTGCCATGATTGCATACTTTG...GATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATCAAAGTATGCAATCATaGCAAAGTCCCCAGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYQSMQS*QSPQHP Trigger: CGGATGCTGGGGACTTTGCCATGATTGCATACTTTG...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | ACAGACCAGGTGAAAGATTTATCACAGTACTGGACAGGAAAAGAAAAATGTGAAGAAAGTCTGTGTTGTTaGGTTGTAGGCCATCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDQVKDLSQYWTGKEKCEESLCC*VVGHHL Trigger: GAGATGATGGCCTACAACCCAACAACACAGACTTTC...TTCACATTTTTCTTTTCCTGTCCAGTACTGTGATAAATCTTTCACCTGGTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR TCA 90 bp | TTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTATATTGTTTGCTGACTaGTGCCAAGCTTTAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGDTMKATGYFIITVCCCILFAD*CQALSL Trigger: AAGACTTAAAGCTTGGCATCAGTCAGCAAACAATAT...ACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | AATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACAATGACAGAGTTCTaGGGCTCTATGTACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NPFEVLGDTMKATGYFIITMTEF*GSMYTS Trigger: GGAAGTGTACATAGAGCCTCAGAACTCTGTCATTGT...GATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATACTCTTTGTCATCTCTaGTCTTTTCGATGCGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYTLCHL*SFRCVG Trigger: TCCCACGCATCGAAAAGATCAGAGATGACAAAGAGT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | ACAGACCAGGTGAAAGATTTATCACAGTACTGGACAGGAAAAGAAAAATGTGAAAAAGCCACTCGGGCTTaGCAACATCATTTTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDQVKDLSQYWTGKEKCEKATRA*QHHFYL Trigger: CAGATAAAAATGATGTTGTCAAGCCCGAGTGGCTTT...TTCACATTTTTCTTTTCCTGTCCAGTACTGTGATAAATCTTTCACCTGGTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR GCA 90 bp | TTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTAACGTTCTCAGAACCTaGAATAACACAGTATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LGDTMKATGYFIITVCCCNVLRT*NNTVCI Trigger: GATACATACTGTGTTATTGCAGGTTCTGAGAACGTT...ACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | ACAGACCAGGTGAAAGATTTATCACAGTACTGGACAGGAAAAGAAAAATGTGAACATAGAGTTCTTTCATaGTGTAACCAGACCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TDQVKDLSQYWTGKEKCEHRVLS*CNQTQH Trigger: GTGTTGGGTCTGGTTACACCATGAAAGAACTCTATG...TTCACATTTTTCTTTTCCTGTCCAGTACTGTGATAAATCTTTCACCTGGTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR CCA 90 bp | TTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCAGAATGCTACTTGGTaGAGATTTCTTATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGDTMKATGYFIITVCCCQNATW*RFLMKR Trigger: CCTTTTCATAAGAAATCTCCACCAAGTAGCATTCTG...ACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCGTATGTATCCGGGCCTaGATTCTGTACTATATAACC | + |
|
Preference number: 4 (lower is better) Translates to: FEVLGDTMKATGYFIITVVCIRA*ILYYIT Trigger: GGTTATATAGTACAGAATCCAGGCCCGGATACATAC...GACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATAAAAGTGAGACATCATaGCACCTCGTGAACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYKSETS*HLVNLY Trigger: GTAAAGGTTCACGAGGTGGCATGATGTCTCACTTTT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTCACACAGATAAAGGATATTGATGAACTTGACAGAGTGAGAGAAAAGCAGCTTCTCTCTTGTCTATaGCATCATTTAATGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLTQIKDIDELDRVREKQLLSCL*HHLMHP Trigger: TGGATGCATTAAATGATGCCATAGACAAGAGAGAAG...CTGCTTTTCTCTCACTCTGTCAAGTTCATCAATATCCTTTATCTGTGTGAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| 3UTR CAA 72 bp | AACCTTAAAAAGAGTACCCAGCAGCTTATGTTCTGGTaGATAACAAATGCATACAGACCAGGTGAAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: NLKKSTQQLMFW*ITNAYRPGERF Trigger: AAATCTTTCACCTGGTCTGTATGCATTTGTTATCAACCAGAACATAAGCTGCTGGGTACTCTTTTTAAGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR GCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATCTTCAAAACAAAGTATaGAATCATGGCAAAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYLQNKV*NHGKVP Trigger: GGGGACTTTGCCATGATTGCATACTTTGTTTTGAAG...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCCTTCAAAACAAAGTATaGAATCATGGCAAAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NPFEVLGDTMKATGYFIILQNKV*NHGKVP Trigger: GGGGACTTTGCCATGATTGCATACTTTGTTTTGAAG...GATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR TCA 90 bp | AATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCGAAAATATTGTTTGCTaGCTGATGCCAAGCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NPFEVLGDTMKATGYFIIENIVC*LMPSFK Trigger: CTTAAAGCTTGGCATCAGTCAGCAAACAATATTTTC...GATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCAACGTTCTCAGAACCTaGAATAACACAGTATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: NPFEVLGDTMKATGYFIINVLRT*NNTVCI Trigger: GATACATACTGTGTTATTGCAGGTTCTGAGAACGTT...GATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATCTTCTCTCTTGTCTATaGCATCATTTAATGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYLLSCL*HHLMHP Trigger: TGGATGCATTAAATGATGCCATAGACAAGAGAGAAG...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCCAGAATGCTACTTGGTaGAGATTTCTTATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPFEVLGDTMKATGYFIIQNATW*RFLMKR Trigger: CCTTTTCATAAGAAATCTCCACCAAGTAGCATTCTG...GATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCACACAGAATGCTACTTaGTGGAGATTTCTTATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FEVLGDTMKATGYFIITVTQNAT*WRFLMK Trigger: TTTCATAAGAAATCTCCACCAAGTAGCATTCTGTGT...GACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CCA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATACACAGAATGCTACTTaGTGGAGATTTCTTATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LINNPFEVLGDTMKATGYTQNAT*WRFLMK Trigger: TTTCATAAGAAATCTCCACCAAGTAGCATTCTGTGT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS GCA 90 bp | GCTTTCCCCCTCAGCTGCTCCAAGTCACCCAGTGTCATACATTCGTaGCACTCTTTGTCATCTCTGATCTTTTCGATGCGTGGGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AFPLSCSKSPSVIHS*HSLSSLIFSMRGKR Trigger: GCGCTTCCCACGCATCGAAAAGATCAGAGATGACAAAGAGTGGCACGAATGTATGACACTGGGTGACTTGGAGCAGCTGAGGGGGAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS CCA 90 bp | AACACGGCACAGAGTGTGGAATACAGATGGCCTGTCACCAGGAGGTaGTGTCTCTGCCACTGCACACAAAAAGTGAGACATCATGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NTAQSVEYRWPVTRR*CLCHCTQKVRHHAT Trigger: GGTGGCATGATGTCTCACTTTTTGTGTGCAGTGGCAGAGACACCACCTCCTGGTGACAGGCCATCTGTATTCCACACTCTGTGCCGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS CCA 90 bp | CATGGTGTAACCAGACCCAACACGGCACAGAGTGTGGAATACAGATaGCCTGTCACCAGGAGGTGGTGTCTCTGCCACTGCACACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HGVTRPNTAQSVEYR*PVTRRWCLCHCTQK Trigger: TTTTTGTGTGCAGTGGCAGAGACACCACCTCCTGGTGACAGGCCATCTGTATTCCACACTCTGTGCCGTGTTGGGTCTGGTTACACCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS TCA 90 bp | TCACCGTCAAGGATGCACGCTTGCACATCTGTCCCGAACGCATTGTaGATAAATGGGGTGAGAGAGCCTTCCTGTGGAGATTCACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPSRMHACTSVPNAL*INGVREPSCGDSPN Trigger: GTTTGGTGAATCTCCACAGGAAGGCTCTCTCACCCCATTTATTCACAATGCGTTCGGGACAGATGTGCAAGCGTGCATCCTTGACGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS GCA 90 bp | AGAGTGATAGAGATGTCACTAAGCCCTACAGAGGGGTCATGCAGCTaGCTGCAGACCTTTTCCAGATCTGTGGTGACGTTGTGCAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVIEMSLSPTEGSCS*LQTFSRSVVTLCNS Trigger: TGAGTTGCACAACGTCACCACAGATCTGGAAAAGGTCTGCAGGCAGCTGCATGACCCCTCTGTAGGGCTTAGTGACATCTCTATCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS GCA 90 bp | CAGGGTGGAGCCAGTCTTGTACATGTCACTGGGGACGATCTCAGCTaGCTTGATCTGAACAATGACAGAGTTCTGAGGCTCTATGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: QGGASLVHVTGDDLS*LDLNNDRVLRLYVH Trigger: GTGTACATAGAGCCTCAGAACTCTGTCATTGTTCAGATCAAGGCAGCTGAGATCGTCCCCAGTGACATGTACAAGACTGGCTCCACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS CCA 90 bp | CCTGTGGAGATTCACCAAACTGGTCGGTATAGTTGTAACCGTTTCTaGAGAAGTACCGGTACAGCGCGCCATCTTTGTGCATCTGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: PVEIHQTGRYSCNRF*RSTGTARHLCASAC Trigger: GCATGCAGATGCACAAAGATGGCGCGCTGTACCGGTACTTCTCCAGAAACGGTTACAACTATACCGACCAGTTTGGTGAATCTCCACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS TCA 90 bp | CAGTCATACTCACGGGCAAAATGCTGCTTTGTCGACGGGCACATGTaGATCATAAAGCGAGGTTGCCACGGCACGCATGTTTTTGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QSYSRAKCCFVDGHM*IIKRGCHGTHVFVL Trigger: TAAGACAAAAACATGCGTGCCGTGGCAACCTCGCTTTATGATTCACATGTGCCCGTCGACAAAGCAGCATTTTGCCCGTGAGTATGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGTTAGAGGAGCAACACTGTAAATTCCCAGCCACCAGGACACTGCCTCACAATGGAAAATATTGTTaGCTGACTGATGCCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRLEEQHCKFPATRTLPHNGKYC*LTDAKL Trigger: AAGCTTGGCATCAGTCAGCAAACAATATTTTCCATT...GTGAGGCAGTGTCCTGGTGGCTGGGAATTTACAGTGTTGCTCCTCTAACCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR CAA 90 bp | CAGGTGTACTGGGACAAGAGCGATGGCTCACTCCTACAGTCTCAGTACTTGGGACCACTACTTCCTTCTTaGTATGAGCTTGAGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QVYWDKSDGSLLQSQYLGPLLPS*YELEFS Trigger: AGAAAACTCAAGCTCATACAAAGAAGGAAGTAGTGG...TCCCAAGTACTGAGACTGTAGGAGTGAGCCATCGCTCTTGTCCCAGTACACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR CAA 90 bp | CACATCCCTCCATTTCAGTACTGCCATGGAAGTACAATTCTCAACAGATACAATAGGGTGGAGCCAGTCTaGTACATGTCACTGGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: HIPPFQYCHGSTILNRYNRVEPV*YMSLGT Trigger: CGTCCCCAGTGACATGTACAAGACTGGCTCCACCCT...ATTGTATCTGTTGAGAATTGTACTTCCATGGCAGTACTGAAATGGAGGGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS CCA 90 bp | TCCAGTATTTTGCCAATTTCAAGCCCAGGTCATAGAGTTCTTTCATaGTGTAACCAGACCCAACACGGCACAGAGTGTGGAATACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSILPISSPGHRVLS*CNQTQHGTECGIQM Trigger: CATCTGTATTCCACACTCTGTGCCGTGTTGGGTCTGGTTACACCATGAAAGAACTCTATGACCTGGGCTTGAAATTGGCAAAATACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGCAACACTGTAAATTCCCAGCCACCAGGACACTGCCTCACACAAAGAGTCTTCTTTGTATGAGCTaGAGTTTTCTGCACTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: EEQHCKFPATRTLPHTKSLLCMS*SFLHYF Trigger: GAAATAGTGCAGAAAACTCAAGCTCATACAAAGAAG...ACTCTTTGTGTGAGGCAGTGTCCTGGTGGCTGGGAATTTACAGTGTTGCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR CAA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGAGCAGGAAACCACCTTaGCTCCATGAAACCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLSRKPP*LHETAA Trigger: AGCTGCGGTTTCATGGAGCAAAGGTGGTTTCCTGCT...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTAGCAGGAAACCACCTTaGCTCCATGAAACCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGDTMKATGYFIITVCCCSRKPP*LHETAA Trigger: AGCTGCGGTTTCATGGAGCAAAGGTGGTTTCCTGCT...ACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATAGGGTGGAGCCAGTCTaGTACATGTCACTGGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LINNPFEVLGDTMKATGYRVEPV*YMSLGT Trigger: CGTCCCCAGTGACATGTACAAGACTGGCTCCACCCT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS GCA 90 bp | TCTGAGGCTCTATGTACACTTCCGGCTTCTCTGTACCACACAGAATaGTACTTGGTGGAGATTTCTTATGAAAAGGCTTCCAGTATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEALCTLPASLYHTE*YLVEISYEKASSIL Trigger: CAAAATACTGGAAGCCTTTTCATAAGAAATCTCCACCAAGTAGCATTCTGTGTGGTACAGAGAAGCCGGAAGTGTACATAGAGCCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS CCA 90 bp | TCTAACGTTCTCAGAACCTGCAATAACACAGTATGTATCCGGGCCTaGATTCTGTACTATATAACCACCGAATTCTGCAATTCTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SNVLRTCNNTVCIRA*ILYYITTEFCNSVL Trigger: GAGAACAGAATTGCAGAATTCGGTGGTTATATAGTACAGAATCCAGGCCCGGATACATACTGTGTTATTGCAGGTTCTGAGAACGTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCAAGGCTTCCAGTATTTaGCCAATTTCAAGCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EVLGDTMKATGYFIITVCKASSI*PISSPG Trigger: ACCTGGGCTTGAAATTGGCAAAATACTGGAAGCCTT...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | GAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCCATTCGTGCCACTCTTaGTCATCTCTGATCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EVLGDTMKATGYFIITVCHSCHS*SSLIFS Trigger: CGAAAAGATCAGAGATGACAAAGAGTGGCACGAATG...GCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGCATTCGTGCCACTCTTaGTCATCTCTGATCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLHSCHS*SSLIFS Trigger: CGAAAAGATCAGAGATGACAAAGAGTGGCACGAATG...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS GCA 90 bp | TTGCCAGAGTTATTGCTGGCAACTAAGTCTAAGAGTTCATTTACCTaGTGTATGGTTAAGCTTCCTTTCTGTAAGCACCTTGGCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPELLLATKSKSSFT*CMVKLPFCKHLGFK Trigger: TTTGAAGCCAAGGTGCTTACAGAAAGGAAGCTTAACCATACAGCAGGTAAATGAACTCTTAGACTTAGTTGCCAGCAATAACTCTGGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS CCA 90 bp | CTCTATGTACACTTCCGGCTTCTCTGTACCACACAGAATGCTACTTaGTGGAGATTTCTTATGAAAAGGCTTCCAGTATTTTGCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LYVHFRLLCTTQNAT*WRFLMKRLPVFCQF Trigger: AAATTGGCAAAATACTGGAAGCCTTTTCATAAGAAATCTCCACCAAGTAGCATTCTGTGTGGTACAGAGAAGCCGGAAGTGTACATAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACCCAAGCTTTAAGTCTTaGATAATCATGCGAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDPSFKS*IIMRIS Trigger: GCTGATTCGCATGATTATCAAAGACTTAAAGCTTGG...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS GCA 90 bp | AATGCTACTTGGTGGAGATTTCTTATGAAAAGGCTTCCAGTATTTTaGCAATTTCAAGCCCAGGTCATAGAGTTCTTTCATGGTGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: NATWWRFLMKRLPVF*QFQAQVIEFFHGVT Trigger: GGTTACACCATGAAAGAACTCTATGACCTGGGCTTGAAATTGGCAAAATACTGGAAGCCTTTTCATAAGAAATCTCCACCAAGTAGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS CCA 90 bp | TATGTACACTTCCGGCTTCTCTGTACCACACAGAATGCTACTTGGTaGAGATTTCTTATGAAAAGGCTTCCAGTATTTTGCCAATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YVHFRLLCTTQNATW*RFLMKRLPVFCQFQ Trigger: TTGAAATTGGCAAAATACTGGAAGCCTTTTCATAAGAAATCTCCACCAAGTAGCATTCTGTGTGGTACAGAGAAGCCGGAAGTGTACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGCCACTACTTCCTTCTTaGTATGAGCTTGAGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLPLLPS*YELEFS Trigger: AGAAAACTCAAGCTCATACAAAGAAGGAAGTAGTGG...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | AGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTCTGACTTTACGTTAGAAAGGTaGGGTGCTTTTAAGTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RYNEGYWLFHHHCLLLSDFTLER*GAFKCS Trigger: TGAACACTTAAAAGCACCCAACCTTTCTAACGTAAA...GTCAGACAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS CCA 90 bp | AGTTATTGCTGGCAACTAAGTCTAAGAGTTCATTTACCTGCTGTATaGTTAAGCTTCCTTTCTGTAAGCACCTTGGCTTCAAAACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYCWQLSLRVHLPAV*LSFLSVSTLASKQS Trigger: ACTTTGTTTTGAAGCCAAGGTGCTTACAGAAAGGAAGCTTAACCATACAGCAGGTAAATGAACTCTTAGACTTAGTTGCCAGCAATAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | AGTATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGCTTCTTTGTATGAGCTaGAGTTTTCTGCACTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIRRYNEGYWLFHHHCLLLLCMS*SFLHYF Trigger: GAAATAGTGCAGAAAACTCAAGCTCATACAAAGAAG...CAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATAAGGCTTCCAGTATTTaGCCAATTTCAAGCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LINNPFEVLGDTMKATGYKASSI*PISSPG Trigger: ACCTGGGCTTGAAATTGGCAAAATACTGGAAGCCTT...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGTTTACGTTAGAAAGGTaGGGTGCTTTTAAGTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLFTLER*GAFKCS Trigger: TGAACACTTAAAAGCACCCAACCTTTCTAACGTAAA...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGATACAATGAAGGCTACTGGCTATTTCATCATCACTGTCTGCTGTTGGGACACCCAACTTTCTaGCAGGATTTTAAACTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IRRYNEGYWLFHHHCLLLGHPTF*QDFKLF Trigger: AAAAAGTTTAAAATCCTGCAAGAAAGTTGGGTGTCC...CAACAGCAGACAGTGATGATGAAATAGCCAGTAGCCTTCATTGTATCTCCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAAGAGTACCCAGCAGCTTATGTTCTGGTTGATAACAAATGCATACAGATTTTTGCCAGAGTTATaGCTGGCAACTAAGTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKKSTQQLMFWLITNAYRFLPEL*LATKSK Trigger: CTTAGACTTAGTTGCCAGCAATAACTCTGGCAAAAA...TCTGTATGCATTTGTTATCAACCAGAACATAAGCTGCTGGGTACTCTTTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095476.6 |
||
| CDS-3UTR CAA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATTTTTTGCCAGAGTTATaGCTGGCAACTAAGTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LINNPFEVLGDTMKATGYFLPEL*LATKSK Trigger: CTTAGACTTAGTTGCCAGCAATAACTCTGGCAAAAA...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
||
| CDS-3UTR CAA 90 bp | CTGATCAATAATCCTTTTGAAGTATTAGGAGATACAATGAAGGCTACTGGCTATCCAAGCTTTAAGTCTTaGATAATCATGCGAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LINNPFEVLGDTMKATGYPSFKS*IIMRIS Trigger: GCTGATTCGCATGATTATCAAAGACTTAAAGCTTGG...ATAGCCAGTAGCCTTCATTGTATCTCCTAATACTTCAAAAGGATTATTGATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS TCA 72 bp | CAGCATCCGTGCGAGCTCCACTGGGGGTTCGGTAATTaGGGAGCTTCTGGGCATCCTTGCCTTCTCGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: QHPCELHWGFGN*GASGHPCLLVV Trigger: TACCACGAGAAGGCAAGGATGCCCAGAAGCTCCTCAATTACCGAACCCCCAGTGGAGCTCGCACGGATGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS GCA 72 bp | GAGATGTCACTAAGCCCTACAGAGGGGTCATGCAGCTaGCTGCAGACCTTTTCCAGATCTGTGGTGACGTTG | + |
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Preference number: 6 (lower is better) Translates to: EMSLSPTEGSCS*LQTFSRSVVTL Trigger: CAACGTCACCACAGATCTGGAAAAGGTCTGCAGGCAGCTGCATGACCCCTCTGTAGGGCTTAGTGACATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS GCA 72 bp | ACCTACATGAAGGTGTTTCGTGGCAAGCTTCCCAGATaGTTTCCCCCTCAGCTGCTCCAAGTCACCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: TYMKVFRGKLPR*FPPQLLQVTQC Trigger: ACACTGGGTGACTTGGAGCAGCTGAGGGGGAAAGCATCTGGGAAGCTTGCCACGAAACACCTTCATGTAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS TCA 72 bp | TCACGGGCAAAATGCTGCTTTGTCGACGGGCACATGTaGATCATAAAGCGAGGTTGCCACGGCACGCATGTT | + |
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Preference number: 6 (lower is better) Translates to: SRAKCCFVDGHM*IIKRGCHGTHV Trigger: AACATGCGTGCCGTGGCAACCTCGCTTTATGATTCACATGTGCCCGTCGACAAAGCAGCATTTTGCCCGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS GCA 72 bp | GTGATAGAGATGTCACTAAGCCCTACAGAGGGGTCATaGAGCTGCCTGCAGACCTTTTCCAGATCTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VIEMSLSPTEGS*SCLQTFSRSVV Trigger: CACCACAGATCTGGAAAAGGTCTGCAGGCAGCTGCATGACCCCTCTGTAGGGCTTAGTGACATCTCTATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | GTGCCACTCTTTGTCATCTCTGATCTTTTCGATGCGTaGGAAGCGCAGGGTGGAGCCAGTCTTGTACATGTC | + |
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Preference number: 6 (lower is better) Translates to: VPLFVISDLFDA*EAQGGASLVHV Trigger: GACATGTACAAGACTGGCTCCACCCTGCGCTTCCCACGCATCGAAAAGATCAGAGATGACAAAGAGTGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS TCA 72 bp | AGGATGCACGCTTGCACATCTGTCCCGAACGCATTGTaGATAAATGGGGTGAGAGAGCCTTCCTGTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: RMHACTSVPNAL*INGVREPSCGD Trigger: ATCTCCACAGGAAGGCTCTCTCACCCCATTTATTCACAATGCGTTCGGGACAGATGTGCAAGCGTGCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS GCA 72 bp | TTGTTGGGTTGTAGGCCATCATCTCACCGTCAAGGATaGACGCTTGCACATCTGTCCCGAACGCATTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLGCRPSSHRQG*TLAHLSRTHCE Trigger: TTCACAATGCGTTCGGGACAGATGTGCAAGCGTGCATCCTTGACGGTGAGATGATGGCCTACAACCCAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | CAGAGTGTGGAATACAGATGGCCTGTCACCAGGAGGTaGTGTCTCTGCCACTGCACACAAAAAGTGAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: QSVEYRWPVTRR*CLCHCTQKVRH Trigger: ATGTCTCACTTTTTGTGTGCAGTGGCAGAGACACCACCTCCTGGTGACAGGCCATCTGTATTCCACACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 90 bp | TGTTGTTGGGTTGTAGGCCATCATCTCACCGTCAAGGATGCACGCTaGCACATCTGTCCCGAACGCATTGTGAATAAATGGGGTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CCWVVGHHLTVKDAR*HICPERIVNKWGER Trigger: TCTCTCACCCCATTTATTCACAATGCGTTCGGGACAGATGTGCAAGCGTGCATCCTTGACGGTGAGATGATGGCCTACAACCCAACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | CGCTTGCACATCTGTCCCGAACGCATTGTGAATAAATaGGGTGAGAGAGCCTTCCTGTGGAGATTCACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RLHICPERIVNK*GERAFLWRFTK Trigger: TTTGGTGAATCTCCACAGGAAGGCTCTCTCACCCCATTTATTCACAATGCGTTCGGGACAGATGTGCAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 72 bp | GTTGTAGGCCATCATCTCACCGTCAAGGATGCACGCTaGCACATCTGTCCCGAACGCATTGTGAATAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: VVGHHLTVKDAR*HICPERIVNKW Trigger: CCATTTATTCACAATGCGTTCGGGACAGATGTGCAAGCGTGCATCCTTGACGGTGAGATGATGGCCTACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 72 bp | TCCAAGTCACCCAGTGTCATACATTCGTGCCACTCTTaGTCATCTCTGATCTTTTCGATGCGTGGGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: SKSPSVIHSCHS*SSLIFSMRGKR Trigger: GCGCTTCCCACGCATCGAAAAGATCAGAGATGACAAAGAGTGGCACGAATGTATGACACTGGGTGACTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS TCA 72 bp | CATGCAGCTGCCTGCAGACCTTTTCCAGATCTGTGGTaGCGTTGTGCAACTCAACTGCATCATTGTGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: HAAACRPFPDLW*RCATQLHHCGK Trigger: TTTTCCACAATGATGCAGTTGAGTTGCACAACGTCACCACAGATCTGGAAAAGGTCTGCAGGCAGCTGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS GCA 72 bp | CTCAGCTGCTCCAAGTCACCCAGTGTCATACATTCGTaGCACTCTTTGTCATCTCTGATCTTTTCGATGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LSCSKSPSVIHS*HSLSSLIFSMR Trigger: ACGCATCGAAAAGATCAGAGATGACAAAGAGTGGCACGAATGTATGACACTGGGTGACTTGGAGCAGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | ATTCACCAAACTGGTCGGTATAGTTGTAACCGTTTCTaGAGAAGTACCGGTACAGCGCGCCATCTTTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: IHQTGRYSCNRF*RSTGTARHLCA Trigger: TGCACAAAGATGGCGCGCTGTACCGGTACTTCTCCAGAAACGGTTACAACTATACCGACCAGTTTGGTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | AAACTTGACCCCCTTCTGCATGAAAGTCTGTGTTGTTaGGTTGTAGGCCATCATCTCACCGTCAAGGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: KLDPLLHESLCC*VVGHHLTVKDA Trigger: TGCATCCTTGACGGTGAGATGATGGCCTACAACCCAACAACACAGACTTTCATGCAGAAGGGGGTCAAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | TTGCCAATTTCAAGCCCAGGTCATAGAGTTCTTTCATaGTGTAACCAGACCCAACACGGCACAGAGTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPISSPGHRVLS*CNQTQHGTECG Trigger: TCCACACTCTGTGCCGTGTTGGGTCTGGTTACACCATGAAAGAACTCTATGACCTGGGCTTGAAATTGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS TCA 72 bp | CGTTCTAGTGTGGAACATAAGTCTGCAAAGGGGACATaGGCTGCAACAGTTTGTGAAGTTTGTGAGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSSVEHKSAKGT*AATVCEVCEEA Trigger: GGCTTCCTCACAAACTTCACAAACTGTTGCAGCTCATGTCCCCTTTGCAGACTTATGTTCCACACTAGAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | CTGCACGGTCTTTACCTTTCTGTATCCGTTCTAGTGTaGAACATAAGTCTGCAAAGGGGACATGAGCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LHGLYLSVSVLV*NISLQRGHELQ Trigger: TTGCAGCTCATGTCCCCTTTGCAGACTTATGTTCCACACTAGAACGGATACAGAAAGGTAAAGACCGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | CGCATTGTGAATAAATGGGGTGAGAGAGCCTTCCTGTaGAGATTCACCAAACTGGTCGGTATAGTTGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: RIVNKWGERAFL*RFTKLVGIVVT Trigger: GGTTACAACTATACCGACCAGTTTGGTGAATCTCCACAGGAAGGCTCTCTCACCCCATTTATTCACAATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 72 bp | AGCTGCCTGCAGACCTTTTCCAGATCTGTGGTGACGTaGTGCAACTCAACTGCATCATTGTGGAAAATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SCLQTFSRSVVT*CNSTASLWKME Trigger: TTCCATTTTCCACAATGATGCAGTTGAGTTGCACAACGTCACCACAGATCTGGAAAAGGTCTGCAGGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 72 bp | CTTTGTCGACGGGCACATGTGAATCATAAAGCGAGGTaGCCACGGCACGCATGTTTTTGTCTTAAAACACTC | + |
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Preference number: 6 (lower is better) Translates to: LCRRAHVNHKAR*PRHACFCLKTL Trigger: GAGTGTTTTAAGACAAAAACATGCGTGCCGTGGCAACCTCGCTTTATGATTCACATGTGCCCGTCGACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS GCA 72 bp | TCAGCAATCACAGGGGCCATTTCTTCAGGAGTCTGCTaGTCACTGGGTTTAATTCCTAGAAACACTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SAITGAISSGVC*SLGLIPRNTSF Trigger: GAAAGAAGTGTTTCTAGGAATTAAACCCAGTGAGCAGCAGACTCCTGAAGAAATGGCCCCTGTGATTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 72 bp | AGGCCAGAATCTTCCACCATCCTTTTGATATCAAACTaGACCCCCTTCTGCATGAAAGTCTGTGTTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RPESSTILLISN*TPFCMKVCVVG Trigger: CCCAACAACACAGACTTTCATGCAGAAGGGGGTCAAGTTTGATATCAAAAGGATGGTGGAAGATTCTGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS TCA 72 bp | ATACTGGTTTTCCTCCTGCAGTTCGCCCTTGTCTACTaGATCGGACACCCAACTTTCTTGCAGGATTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: ILVFLLQFALVY*IGHPTFLQDFK Trigger: TTTAAAATCCTGCAAGAAAGTTGGGTGTCCGATTCAGTAGACAAGGGCGAACTGCAGGAGGAAAACCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS GCA 72 bp | CTATGTACACTTCCGGCTTCTCTGTACCACACAGAATaGTACTTGGTGGAGATTTCTTATGAAAAGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LCTLPASLYHTE*YLVEISYEKAS Trigger: GGAAGCCTTTTCATAAGAAATCTCCACCAAGTAGCATTCTGTGTGGTACAGAGAAGCCGGAAGTGTACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | CACTTCCGGCTTCTCTGTACCACACAGAATGCTACTTaGTGGAGATTTCTTATGAAAAGGCTTCCAGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: HFRLLCTTQNAT*WRFLMKRLPVF Trigger: AAATACTGGAAGCCTTTTCATAAGAAATCTCCACCAAGTAGCATTCTGTGTGGTACAGAGAAGCCGGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CCA 72 bp | CTCAGAACCTGCAATAACACAGTATGTATCCGGGCCTaGATTCTGTACTATATAACCACCGAATTCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LRTCNNTVCIRA*ILYYITTEFCN Trigger: ATTGCAGAATTCGGTGGTTATATAGTACAGAATCCAGGCCCGGATACATACTGTGTTATTGCAGGTTCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 90 bp | GTTCATTTACCTGCTGTATGGTTAAGCTTCCTTTCTGTAAGCACCTaGGCTTCAAAACAAAGTATGCAATCATGGCAAAGTCCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: VHLPAVWLSFLSVST*ASKQSMQSWQSPQH Trigger: ATGCTGGGGACTTTGCCATGATTGCATACTTTGTTTTGAAGCCAAGGTGCTTACAGAAAGGAAGCTTAACCATACAGCAGGTAAATGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 90 bp | CTTCTTTGTATGAGCTTGAGTTTTCTGCACTATTTCTATGCGGCCTaGTATGGGTGTGAAAGTGCTACTAAGGATCTCATACCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLCMSLSFLHYFYAA*YGCESATKDLIPLP Trigger: AGGAAGAGGTATGAGATCCTTAGTAGCACTTTCACACCCATACAAGGCCGCATAGAAATAGTGCAGAAAACTCAAGCTCATACAAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 90 bp | GCTCTATGTACACTTCCGGCTTCTCTGTACCACACAGAATGCTACTaGGTGGAGATTTCTTATGAAAAGGCTTCCAGTATTTTGCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: ALCTLPASLYHTECY*VEISYEKASSILPI Trigger: AATTGGCAAAATACTGGAAGCCTTTTCATAAGAAATCTCCACCAAGTAGCATTCTGTGTGGTACAGAGAAGCCGGAAGTGTACATAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 72 bp | ATGAGCTTGAGTTTTCTGCACTATTTCTATGCGGCCTaGTATGGGTGTGAAAGTGCTACTAAGGATCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: MSLSFLHYFYAA*YGCESATKDLI Trigger: TATGAGATCCTTAGTAGCACTTTCACACCCATACAAGGCCGCATAGAAATAGTGCAGAAAACTCAAGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 90 bp | CTCTCTTGTCTATGGCATCATTTAATGCATCCACTACTTCCTTCTTaGTATGAGCTTGAGTTTTCTGCACTATTTCTATGCGGCCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LSCLWHHLMHPLLPS*YELEFSALFLCGLV Trigger: TACAAGGCCGCATAGAAATAGTGCAGAAAACTCAAGCTCATACAAAGAAGGAAGTAGTGGATGCATTAAATGATGCCATAGACAAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS CAA 90 bp | GAATGCTACTTGGTGGAGATTTCTTATGAAAAGGCTTCCAGTATTTaGCCAATTTCAAGCCCAGGTCATAGAGTTCTTTCATGGTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: ECYLVEISYEKASSI*PISSPGHRVLSWCN Trigger: GTTACACCATGAAAGAACTCTATGACCTGGGCTTGAAATTGGCAAAATACTGGAAGCCTTTTCATAAGAAATCTCCACCAAGTAGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS TCA 72 bp | ACAAGTCCAAATAAATGGTGTAATGTCGAAACATACTaGGAGGAGAGTGGTCCCAGGAATAACGACATTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TSPNKWCNVETY*EESGPRNNDIL Trigger: TAGAATGTCGTTATTCCTGGGACCACTCTCCTCTCAGTATGTTTCGACATTACACCATTTATTTGGACTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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| CDS GCA 72 bp | TTATTGCTGGCAACTAAGTCTAAGAGTTCATTTACCTaGTGTATGGTTAAGCTTCCTTTCTGTAAGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLATKSKSSFT*CMVKLPFCKHL Trigger: AAGGTGCTTACAGAAAGGAAGCTTAACCATACAGCAGGTAAATGAACTCTTAGACTTAGTTGCCAGCAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095476.6 ENSMUST00000170033.2 |
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