Pregenerated sensors for LIF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034394Ensembl transcript IDs: ENSMUST00000040750.4, ENSMUST00000066283.12
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGCCTGGGAGCCCAGACATGGGCGGGAGTGGGAAGGCAGCGATaGAGCAAGGACCACAGCTTCCTGGTCTGTGTCCCAGGCGTCTCG | + |
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Preference number: 1 (lower is better) Translates to: PCLGAQTWAGVGRQR*SKDHSFLVCVPGVS Trigger: CGAGACGCCTGGGACACAGACCAGGAAGCTGTGGTCCTTGCTTCATCGCTGCCTTCCCACTCCCGCCCATGTCTGGGCTCCCAGGCAGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | GTGTCCCAGGCGTCTCGGGCCTTGATCTCCCCTTCTCTGGCGCACTaGGCAGCTGTTCAGGCCCAGTTCAGGGCCTGCACTGCTCCAACC | + |
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Preference number: 1 (lower is better) Translates to: VSQASRALISPSLAH*AAVQAQFRACTAPT Trigger: GGTTGGAGCAGTGCAGGCCCTGAACTGGGCCTGAACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR TCA 90 bp | CAAGGACCACAGCTTCCTGGTCTGTGTCCCAGGCGTCTCGGGCCTTaGTCTCCCCTTCTCTGGCGCACTGGGCAGCTGTTCAGGCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: QGPQLPGLCPRRLGP*SPLLWRTGQLFRPS Trigger: ACTGGGCCTGAACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGACACAGACCAGGAAGCTGTGGTCCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | GGGCGGGAGTGGGAAGGCAGCGATGAAGCAAGGACCACAGCTTCCTaGTCTGTGTCCCAGGCGTCTCGGGCCTTGATCTCCCCTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: GREWEGSDEARTTAS*SVSQASRALISPSL Trigger: CAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGACACAGACCAGGAAGCTGTGGTCCTTGCTTCATCGCTGCCTTCCCACTCCCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR GCA 90 bp | CCTTCTCTGGCGCACTGGGCAGCTGTTCAGGCCCAGTTCAGGGCCTaGACTGCTCCAACCTCCTGTATTCACCCTCTGTGGGTGTTCGGG | + |
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Preference number: 1 (lower is better) Translates to: PSLAHWAAVQAQFRA*TAPTSCIHPLWVFG Trigger: CCCGAACACCCACAGAGGGTGAATACAGGAGGTTGGAGCAGTGCAGGCCCTGAACTGGGCCTGAACAGCTGCCCAGTGCGCCAGAGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR GCA 90 bp | GCCTTCCTCCCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTaGCTGGCCTCAGCACAAAGGAGAGATCAGATCGGATTCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: AFLPTLLPDRGRSSA*LASAQRRDQIGFPA Trigger: GGCAGGGAATCCGATCTGATCTCTCCTTTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGGGAGGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR GCA 90 bp | GGCTGCCTTCCTCCCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTaGTTGCCTGGCCTCAGCACAAAGGAGAGATCAGATCGGATTCCC | + |
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Preference number: 1 (lower is better) Translates to: GCLPPYPAPRSRAFL*LPGLSTKERSDRIP Trigger: GGGAATCCGATCTGATCTCTCCTTTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGGGAGGAAGGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | ATTCACCCTCTGTGGGTGTTCGGGCCACCCGAGGAGCTTCCATGCTaGTCGAAAGCACGCTGGGTGCCGGGTCAGGATGTTTCAGCACTC | + |
|
Preference number: 1 (lower is better) Translates to: IHPLWVFGPPEELPC*SKARWVPGQDVSAL Trigger: GAGTGCTGAAACATCCTGACCCGGCACCCAGCGTGCTTTCGACCAGCATGGAAGCTCCTCGGGTGGCCCGAACACCCACAGAGGGTGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | GATCAGATCGGATTCCCTGCCTGGGAGCCCAGACATGGGCGGGAGTaGGAAGGCAGCGATGAAGCAAGGACCACAGCTTCCTGGTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: DQIGFPAWEPRHGRE*EGSDEARTTASWSV Trigger: CACAGACCAGGAAGCTGTGGTCCTTGCTTCATCGCTGCCTTCCCACTCCCGCCCATGTCTGGGCTCCCAGGCAGGGAATCCGATCTGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | TCCTCCCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTaGCCTCAGCACAAAGGAGAGATCAGATCGGATTCCCTGCCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: SSLPCSQIEGVPLLA*PQHKGEIRSDSLPG Trigger: CCCAGGCAGGGAATCCGATCTGATCTCTCCTTTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR GCA 90 bp | TGTATTCACCCTCTGTGGGTGTTCGGGCCACCCGAGGAGCTTCCATaGTGGTCGAAAGCACGCTGGGTGCCGGGTCAGGATGTTTCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: CIHPLWVFGPPEELP*WSKARWVPGQDVSA Trigger: TGCTGAAACATCCTGACCCGGCACCCAGCGTGCTTTCGACCAGCATGGAAGCTCCTCGGGTGGCCCGAACACCCACAGAGGGTGAATACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | GTGTTCGGGCCACCCGAGGAGCTTCCATGCTGGTCGAAAGCACGCTaGGTGCCGGGTCAGGATGTTTCAGCACTCCTCAGCTACGATTTG | + |
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Preference number: 1 (lower is better) Translates to: VFGPPEELPCWSKAR*VPGQDVSALLSYDL Trigger: CAAATCGTAGCTGAGGAGTGCTGAAACATCCTGACCCGGCACCCAGCGTGCTTTCGACCAGCATGGAAGCTCCTCGGGTGGCCCGAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | CAGTTCAGGGCCTGCACTGCTCCAACCTCCTGTATTCACCCTCTGTaGGTGTTCGGGCCACCCGAGGAGCTTCCATGCTGGTCGAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: QFRACTAPTSCIHPL*VFGPPEELPCWSKA Trigger: TGCTTTCGACCAGCATGGAAGCTCCTCGGGTGGCCCGAACACCCACAGAGGGTGAATACAGGAGGTTGGAGCAGTGCAGGCCCTGAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR GCA 90 bp | GGCCTCATCTTCCCTGAGACCCTGACCTCAAGTTCTGCTTCTCCATaGTCCAGGGACCCAAGACAGCCCTCTGGTCCCCTTCAAGTACCT | + |
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Preference number: 1 (lower is better) Translates to: GLIFPETLTSSSASP*SRDPRQPSGPLQVP Trigger: AGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATGGAGAAGCAGAACTTGAGGTCAGGGTCTCAGGGAAGATGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR TCA 90 bp | GCTGGATCAAACACAGCACTCTGGGCCTCATCTTCCCTGAGACCCTaGCCTCAAGTTCTGCTTCTCCATGCTCCAGGGACCCAAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: AGSNTALWASSSLRP*PQVLLLHAPGTQDS Trigger: GCTGTCTTGGGTCCCTGGAGCATGGAGAAGCAGAACTTGAGGTCAGGGTCTCAGGGAAGATGAGGCCCAGAGTGCTGTGTTTGATCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR TCA 90 bp | ACAGCTGTGCTGGATCAAACACAGCACTCTGGGCCTCATCTTCCCTaGGACCCTGACCTCAAGTTCTGCTTCTCCATGCTCCAGGGACCC | + |
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Preference number: 1 (lower is better) Translates to: TAVLDQTQHSGPHLP*DPDLKFCFSMLQGP Trigger: GGGTCCCTGGAGCATGGAGAAGCAGAACTTGAGGTCAGGGTCTCAGGGAAGATGAGGCCCAGAGTGCTGTGTTTGATCCAGCACAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR TCA 90 bp | CTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTaGCAGAGAAAGGTGCAAAACCGCGTGAAGCAGAATCCCACTGCT | + |
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Preference number: 1 (lower is better) Translates to: LQGLSTCRPGKVLRE*QRKVQNRVKQNPTA Trigger: AGCAGTGGGATTCTGCTTCACGCGGTTTTGCACCTTTCTCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR GCA 90 bp | GCTAACCGAGTTCGTCAGGCTTTGACAACTGGAAGCTGGCCGCTGTaGTTCTGTGGGAGCCTGAACACTGGTGACCTAGACTCTTCCATC | + |
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Preference number: 1 (lower is better) Translates to: ANRVRQALTTGSWPL*FCGSLNTGDLDSSI Trigger: GATGGAAGAGTCTAGGTCACCAGTGTTCAGGCTCCCACAGAAGCACAGCGGCCAGCTTCCAGTTGTCAAAGCCTGACGAACTCGGTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR GCA 90 bp | GCAGTGCAAAGGAGAGGCTGGGCTGGGACTGGGGAGTCATCCGAATaGAGACAGCCATATCATTTCCCTTCTGAAGCCGCTACCATGCAA | + |
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Preference number: 1 (lower is better) Translates to: AVQRRGWAGTGESSE*RQPYHFPSEAATMQ Trigger: TTGCATGGTAGCGGCTTCAGAAGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCCTCTCCTTTGCACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | AGGAAAGGAAAGAGGGAGAGCAGCAGTGCAAAGGAGAGGCTGGGCTaGGACTGGGGAGTCATCCGAATGCAGACAGCCATATCATTTCCC | + |
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Preference number: 1 (lower is better) Translates to: RKGKRESSSAKERLG*DWGVIRMQTAISFP Trigger: GGGAAATGATATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCCTCTCCTTTGCACTGCTGCTCTCCCTCTTTCCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | TGCATAGAAGCTAACCGAGTTCGTCAGGCTTTGACAACTGGAAGCTaGCCGCTGTGCTTCTGTGGGAGCCTGAACACTGGTGACCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: CIEANRVRQALTTGS*PLCFCGSLNTGDLD Trigger: GTCTAGGTCACCAGTGTTCAGGCTCCCACAGAAGCACAGCGGCCAGCTTCCAGTTGTCAAAGCCTGACGAACTCGGTTAGCTTCTATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR TCA 90 bp | AACTGGAAGCTGGCCGCTGTGCTTCTGTGGGAGCCTGAACACTGGTaGCCTAGACTCTTCCATCTGACAGTCTCTAAGCCTGAACTCTCT | + |
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Preference number: 1 (lower is better) Translates to: NWKLAAVLLWEPEHW*PRLFHLTVSKPELS Trigger: AGAGAGTTCAGGCTTAGAGACTGTCAGATGGAAGAGTCTAGGTCACCAGTGTTCAGGCTCCCACAGAAGCACAGCGGCCAGCTTCCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR GCA 90 bp | CACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTGGGTTaGTTGAGTCGGGATCAAGGACACAGAAATAGACAAGAGTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: HIPCLLQRAGKAELG*LSRDQGHRNRQEWG Trigger: CCCCCACTCTTGTCTATTTCTGTGTCCTTGATCCCGACTCAAGCAACCCAGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR TCA 90 bp | TTATGCTACCTGTCTGTCTGCTCAAGATCACCTGTTCTCAGGGGTTaGGAAGCAGATGAGAGCTGCAGTCGGCTACTGCCTCAGCAATGG | + |
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Preference number: 1 (lower is better) Translates to: LCYLSVCSRSPVLRG*EADESCSRLLPQQW Trigger: CCATTGCTGAGGCAGTAGCCGACTGCAGCTCTCATCTGCTTCTCAACCCCTGAGAACAGGTGATCTTGAGCAGACAGACAGGTAGCATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR TCA 90 bp | GCTGGGTGCCGGGTCAGGATGTTTCAGCACTCCTCAGCTACGATTTaGGGAAGGAATCAGTTTTGCCCAAGGTTCCAGAGCCATTCACTT | + |
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Preference number: 1 (lower is better) Translates to: AGCRVRMFQHSSATI*GRNQFCPRFQSHSL Trigger: AAGTGAATGGCTCTGGAACCTTGGGCAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAGTGCTGAAACATCCTGACCCGGCACCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | GAAGTGATGACAAAGCCCAACAGGCCCCAGGCTGTGGCATCATCTTaGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGGGCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: EVMTKPNRPQAVASS*LLDKLTLSLEKGSQ Trigger: CTGGCTGCCCTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTGGGGCCTGTTGGGCTTTGTCATCACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR TCA 90 bp | CTTTTAGACAAATTGACTCTCAGCTTGGAGAAGGGCAGCCAGTCCTaGGATGAGCCTGACGCAGCAACAGGAGTACGGTGGAGTAACTTT | + |
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Preference number: 1 (lower is better) Translates to: LLDKLTLSLEKGSQS*DEPDAATGVRWSNF Trigger: AAAGTTACTCCACCGTACTCCTGTTGCTGCGTCAGGCTCATCTCAGGACTGGCTGCCCTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CCA 90 bp | CCATCCCTTTTTCTCTGGTCCAGACACACTACCTACTATGCTCGGTaGAAGTCAATGCTTCCAGGTGAAAGATGTCAGGTGAGCAACTAC | + |
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Preference number: 1 (lower is better) Translates to: PSLFLWSRHTTYYAR*KSMLPGERCQVSNY Trigger: GTAGTTGCTCACCTGACATCTTTCACCTGGAAGCATTGACTTCCACCGAGCATAGTAGGTAGTGTGTCTGGACCAGAGAAAAAGGGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CAA 90 bp | GCAAGGACCACAGCTTCCTGGTCTGTGTCCCAGGCGTCTCGGGCCTaGATCTCCCCTTCTCTGGCGCACTGGGCAGCTGTTCAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ARTTASWSVSQASRA*ISPSLAHWAAVQAQ Trigger: CTGGGCCTGAACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGACACAGACCAGGAAGCTGTGGTCCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR GCA 90 bp | GTCCCAGGCGTCTCGGGCCTTGATCTCCCCTTCTCTGGCGCACTGGGCAGCTGTCAGCCTGCCTCTTCCTaGCTGCACACACCTCACCTC | + |
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Preference number: 2 (lower is better) Translates to: VPGVSGLDLPFSGALGSCQPASS*LHTPHL Trigger: GAGGTGAGGTGTGTGCAGGCAGGAAGAGGCAGGCTG...ACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR TCA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAATCCGGATCCTGCTCCTaGGGTCCCTCAGTCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: PTLLPDRGRSSACLASAQSGSCS*GPSVHG Trigger: ACCATGGACTGAGGGACCTCAGGAGCAGGATCCGGA...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR CCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTGTACCTGGAAATCCCTaGGGTCTGCCAGCAGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRAVPGNP*GLPAAP Trigger: CGGGGCTGCTGGCAGACCCCAGGGATTTCCAGGTAC...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAGGCGTCTCGGGCCTTGATCTCCCCTTCTCTGGCGCACTGGGCAGCTGTTTGACAACTGGAAGCTaGCCGCTGTGCTTCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: VPGVSGLDLPFSGALGSCLTTGS*PLCFCG Trigger: CCCACAGAAGCACAGCGGCCAGCTTCCAGTTGTCAA...ACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR CCA 90 bp | GGCCCCACTAGGTGGAGAGTCTCGGCCCCAGCTCCCATGGAAGGAGCCTCATACAACCACGCCAGGCTGTaGGGGGAACTGCATAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GPTRWRVSAPAPMEGASYNHARL*GELHRS Trigger: GCTTCTATGCAGTTCCCCCCACAGCCTGGCGTGGTT...GTATGAGGCTCCTTCCATGGGAGCTGGGGCCGAGACTCTCCACCTAGTGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR CCA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCGCCACTGCCCCAGCTTaGCTGCCTTCCTCCCTACCC | + |
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Preference number: 2 (lower is better) Translates to: LHLWFQAFPKPELQGLSTATAPA*LPSSLP Trigger: GGGTAGGGAGGAAGGCAGCCAAGCTGGGGCAGTGGC...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR TCA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAAGGGCCTCATCTTCCCTaGGACCCTGACCTCAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: PTLLPDRGRSSACLASAQGPHLP*DPDLKF Trigger: GAACTTGAGGTCAGGGTCTCAGGGAAGATGAGGCCC...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR GCA 90 bp | GTCCCAGGCGTCTCGGGCCTTGATCTCCCCTTCTCTGGCGCACTGGGCAGCTGTAGTTCTGCTTCTCCATaGTCCAGGGACCCAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: VPGVSGLDLPFSGALGSCSSASP*SRDPRQ Trigger: CTGTCTTGGGTCCCTGGAGCATGGAGAAGCAGAACT...ACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR GCA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAACAGGAATCTAGGGGGTaGCAGAGAGCTCAGTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PTLLPDRGRSSACLASAQQESRG*QRAQWD Trigger: GTCCCACTGAGCTCTCTGGCACCCCCTAGATTCCTG...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR CCA 90 bp | CCCGAGGAGCTTCCATGCTGGTCGAAAGCACGCTGGGTGCCGGGTCAGGATGTTAACCACGCCAGGCTGTaGGGGGAACTGCATAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: PEELPCWSKARWVPGQDVNHARL*GELHRS Trigger: GCTTCTATGCAGTTCCCCCCACAGCCTGGCGTGGTT...AACATCCTGACCCGGCACCCAGCGTGCTTTCGACCAGCATGGAAGCTCCTCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAGGCGTCTCGGGCCTTGATCTCCCCTTCTCTGGCGCACTGGGCAGCTGTAGCAGAGAGACAAACTaGCCCAGCTTTTTCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: VPGVSGLDLPFSGALGSCSRETN*PSFFWG Trigger: CCCCCAGAAAAAGCTGGGCCAGTTTGTCTCTCTGCT...ACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR CCA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAAAGACATGGGCGGGAGTaGGAAGGCAGCGATGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PTLLPDRGRSSACLASAQRHGRE*EGSDEA Trigger: TGCTTCATCGCTGCCTTCCCACTCCCGCCCATGTCT...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR CAA 90 bp | TGCCTTCCTCCCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTaGCCTGGCCTCAGCACAAAGGAGAGATCAGATCGGATTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: CLPPYPAPRSRAFLC*PGLSTKERSDRIPC Trigger: GCAGGGAATCCGATCTGATCTCTCCTTTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGGGAGGAAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR TCA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAAGGGTTGAGAAGCAGATaGGAGCTGCAGTCGGCTACT | + |
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Preference number: 2 (lower is better) Translates to: PTLLPDRGRSSACLASAQGLRSR*ELQSAT Trigger: AGTAGCCGACTGCAGCTCTCATCTGCTTCTCAACCC...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR TCA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAAGCCAGCTCTCTGATTTaGCCCATGAGCTGCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: PTLLPDRGRSSACLASAQASSLI*PMSCTC Trigger: ACAGGTGCAGCTCATGGGTCAAATCAGAGAGCTGGC...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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| 3UTR-3UTR GCA 90 bp | GAGAGATCAGATCGGATTCCCTGCCTGGGAGCCCAGACATGGGCGGGAGTGGGATGGCCCAGCCCAGAGTaGAGTGAGTACCTGGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: ERSDRIPCLGAQTWAGVGWPSPE*SEYLEI Trigger: GATTTCCAGGTACTCACTGCACTCTGGGCTGGGCCA...TCCCACTCCCGCCCATGTCTGGGCTCCCAGGCAGGGAATCCGATCTGATCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGATCAGATCGGATTCCCTGCCTGGGAGCCCAGACATGGGCGGGAGTGGGATCAGCAATGGCTGGCTaGCTTGCTCCTTCCCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: ERSDRIPCLGAQTWAGVGSAMAG*LAPSLT Trigger: AGTCAGGGAAGGAGCAAGGCAGCCAGCCATTGCTGA...TCCCACTCCCGCCCATGTCTGGGCTCCCAGGCAGGGAATCCGATCTGATCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTCGGCCCCAGCTCCCATaGAAGGAGCCTCATACCATT | + |
|
Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRARPQLP*KEPHTI Trigger: AATGGTATGAGGCTCCTTCCATGGGAGCTGGGGCCG...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTGGGTTGAGAAGCAGATaGGAGCTGCAGTCGGCTACT | + |
|
Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRAGLRSR*ELQSAT Trigger: AGTAGCCGACTGCAGCTCTCATCTGCTTCTCAACCC...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTAGGTGCAAAACCGCGTaGAGCAGAATCCCACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRARCKTA*SRIPLL Trigger: CAGCAGTGGGATTCTGCTTCACGCGGTTTTGCACCT...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | CATGCTCCAGGGACCCAAGACAGCCCTCTGGTCCCCTTCAAGTACCTTTGCGACCTGCCTCTTCCTGCCTaGACACACCTCACCTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: HAPGTQDSPLVPFKYLCDLPLPA*THLTSR Trigger: CCTAGAGGTGAGGTGTGTGCAGGCAGGAAGAGGCAG...GTCGCAAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCCAGGAATCTAGGGGGTaGCAGAGAGCTCAGTGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LHLWFQAFPKPELQGLSTQESRG*QRAQWD Trigger: GTCCCACTGAGCTCTCTGGCACCCCCTAGATTCCTG...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | GGCTGGGCTGGGACTGGGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTTCGAGGGCGTTCCTCTaGTTGCCTGGCCTCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: GWAGTGESSECRQPYHFPSRAFL*LPGLST Trigger: TGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGA...AGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | CCCGAGGAGCTTCCATGCTGGTCGAAAGCACGCTGGGTGCCGGGTCAGGATGTTTCAGGCTTTGACAACTaGAAGCTGGCCGCTGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PEELPCWSKARWVPGQDVSGFDN*KLAAVL Trigger: AAGCACAGCGGCCAGCTTCCAGTTGTCAAAGCCTGA...AACATCCTGACCCGGCACCCAGCGTGCTTTCGACCAGCATGGAAGCTCCTCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGGCTGGGACTGGGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTACCTCTAGGTCCAGCTaGCAGACCCCAACCACGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GWAGTGESSECRQPYHFPTSRSS*QTPTTP Trigger: TGGCGTGGTTGGGGTCTGCCAGCTGGACCTAGAGGT...AGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CATGCTCCAGGGACCCAAGACAGCCCTCTGGTCCCCTTCAAGTACCTTTGCGACCCTGTTCTCAGGGGTTaGGAAGCAGATGAGAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HAPGTQDSPLVPFKYLCDPVLRG*EADESC Trigger: GCAGCTCTCATCTGCTTCTCAACCCCTGAGAACAGG...GTCGCAAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTGACAGAGGGCCTCATCTTCCCTaGGACCCTGACCTCAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSRACPPAVQVKCLESDRGPHLP*DPDLKF Trigger: GAACTTGAGGTCAGGGTCTCAGGGAAGATGAGGCCC...TCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCTGGCCCAGCCCAGAGTaGAGTGAGTACCTGGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: LHLWFQAFPKPELQGLSTWPSPE*SEYLEI Trigger: GATTTCCAGGTACTCACTGCACTCTGGGCTGGGCCA...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTAGTTCTGCTTCTCCATaGTCCAGGGACCCAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRASSASP*SRDPRQ Trigger: CTGTCTTGGGTCCCTGGAGCATGGAGAAGCAGAACT...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCCCTGTAACAATCATGTaGCTCCAGACCAGGCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LHLWFQAFPKPELQGLSTPVTIM*LQTRPH Trigger: GTGGGGCCTGGTCTGGAGGCACATGATTGTTACAGG...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCTGCCAGATTCCATCATaGCCCAGCCCAGAGTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LHLWFQAFPKPELQGLSTCQIPS*PSPECS Trigger: ACTGCACTCTGGGCTGGGCCATGATGGAATCTGGCA...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTCCCAAGACAGCCCTCTaGTCCCCTTCAAGTACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRAPKTAL*SPSSTF Trigger: AAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGG...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTTCCCCAAAGGCTCAATaGTTCTGGGATGCTGGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRASPKAQ*FWDAGQ Trigger: TTGCCCAGCATCCCAGAACCATTGAGCCTTTGGGGA...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCATGCTCCAGGGACCCAAGACAGCCCTCTGGTCCCCTTCAAGTACCTTTCTGCCTCTTCCTGCCTaGACACACCTCACCTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: FSMLQGPKTALWSPSSTFLPLPA*THLTSR Trigger: CCTAGAGGTGAGGTGTGTGCAGGCAGGAAGAGGCAG...AAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | AGCTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTGACAGACCTGTAACAATCATGTaGCTCCAGACCAGGCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SSRACPPAVQVKCLESDRPVTIM*LQTRPH Trigger: GTGGGGCCTGGTCTGGAGGCACATGATTGTTACAGG...TCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTAGGTCCCTCAGTCCATaGTACATTCAAGACCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRARSLSP*YIQDLL Trigger: GAGGAGGTCTTGAATGTACCATGGACTGAGGGACCT...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCCTTTGCTGTCTGCTGTAGACAACTTGTGCAGCTTGTTCATACACCCAGCTCCGGATCCTGCTCCTaGGGTCCCTCAGTCCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: QPFAVCCRQLVQLVHTPSSGSCS*GPSVHG Trigger: ACCATGGACTGAGGGACCTCAGGAGCAGGATCCGGA...GCTGGGTGTATGAACAAGCTGCACAAGTTGTCTACAGCAGACAGCAAAGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTTCTGAAGCCGCTACCATCGAGGGCGTTCCTCTaGTTGCCTGGCCTCAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: GSHPNADSHIISLLKPLPSRAFL*LPGLST Trigger: TGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGA...TGGTAGCGGCTTCAGAAGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCAGACCCGACATTCTACTTTATGCTACCTGTCTGTCTGCTCAAGATCACCGTACCTGGAAATCCCTaGGGTCTGCCAGCAGCCCCG | + |
|
Preference number: 2 (lower is better) Translates to: ASDPTFYFMLPVCLLKITVPGNP*GLPAAP Trigger: CGGGGCTGCTGGCAGACCCCAGGGATTTCCAGGTAC...GGTGATCTTGAGCAGACAGACAGGTAGCATAAAGTAGAATGTCGGGTCTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CAA 90 bp | GGGTCTAGGACACTTCCCAGCCCTTTGCTGTCTGCTGTAGACAACTaGTGCAGCTTGTTCATACACCCAGCAAGCAAGGGGCTGAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GSRTLPSPLLSAVDN*CSLFIHPASKGLSE Trigger: CTCACTCAGCCCCTTGCTTGCTGGGTGTATGAACAAGCTGCACAAGTTGTCTACAGCAGACAGCAAAGGGCTGGGAAGTGTCCTAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTTCTGAAGCCGCTACCAGTGGGAAGGCAGCGATaGAGCAAGGACCACAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: GSHPNADSHIISLLKPLPVGRQR*SKDHSF Trigger: GAAGCTGTGGTCCTTGCTTCATCGCTGCCTTCCCAC...TGGTAGCGGCTTCAGAAGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGCCAGAGAGCTCAGTGGGACAAAACAACAAGAAACTGTTCCACCCCCTTGTGCCAGATTCCATCATaGCCCAGCCCAGAGTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GCQRAQWDKTTRNCSTPLCQIPS*PSPECS Trigger: ACTGCACTCTGGGCTGGGCCATGATGGAATCTGGCA...CAAGGGGGTGGAACAGTTTCTTGTTGTTTTGTCCCACTGAGCTCTCTGGCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGCCAGAGAGCTCAGTGGGACAAAACAACAAGAAACTGTTCCACCCCCTTGTTGACAACTGGAAGCTaGCCGCTGTGCTTCTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GCQRAQWDKTTRNCSTPLLTTGS*PLCFCG Trigger: CCCACAGAAGCACAGCGGCCAGCTTCCAGTTGTCAA...CAAGGGGGTGGAACAGTTTCTTGTTGTTTTGTCCCACTGAGCTCTCTGGCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTGACAGATCAAACACAGCACTCTaGGCCTCATCTTCCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SSRACPPAVQVKCLESDRSNTAL*ASSSLR Trigger: TCTCAGGGAAGATGAGGCCCAGAGTGCTGTGTTTGA...TCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGGCTGGGACTGGGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTTCAAACACAGCACTCTaGGCCTCATCTTCCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GWAGTGESSECRQPYHFPSNTAL*ASSSLR Trigger: TCTCAGGGAAGATGAGGCCCAGAGTGCTGTGTTTGA...AGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTTCTGAAGCCGCTACCAGCCAGCTCTCTGATTTaGCCCATGAGCTGCACCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GSHPNADSHIISLLKPLPASSLI*PMSCTC Trigger: ACAGGTGCAGCTCATGGGTCAAATCAGAGAGCTGGC...TGGTAGCGGCTTCAGAAGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTAAAGTGCTTAGAGAGTaGCAGAGAAAGGTGCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RGPGPHTMSAPESRQSRAKVLRE*QRKVQN Trigger: GTTTTGCACCTTTCTCTGTCACTCTCTAAGCACTTT...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCCCCAGGCTGTGGCATCATCTTGGCTTTTAGACAAATTGACTCTCAGCTTTCAGATCGGATTCCCTaGCTGGGAGCCCAGACATGG | + |
|
Preference number: 2 (lower is better) Translates to: QAPGCGIILAFRQIDSQLSDRIP*LGAQTW Trigger: CCATGTCTGGGCTCCCAGGCAGGGAATCCGATCTGA...AAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTGGGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | TTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGGGCAGCCAGTCCTGAGACCTTCCTCCCTACCCTaGTCCCAGATCGAGGGCGTT | + |
|
Preference number: 2 (lower is better) Translates to: LAFRQIDSQLGEGQPVLRPSSLP*SQIEGV Trigger: AACGCCCTCGATCTGGGAGCAGGGTAGGGAGGAAGG...TCTCAGGACTGGCTGCCCTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTTCTGAAGCCGCTACCAGTTCCTCTGCTTGCCTaGCCTCAGCACAAAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GSHPNADSHIISLLKPLPVPLLA*PQHKGE Trigger: CTCTCCTTTGTGCTGAGGCCAGGCAAGCAGAGGAAC...TGGTAGCGGCTTCAGAAGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTTCTGAAGCCGCTACCATCTTCCCTGAGACCCTaGCCTCAAGTTCTGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GSHPNADSHIISLLKPLPSSLRP*PQVLLL Trigger: GAGAAGCAGAACTTGAGGTCAGGGTCTCAGGGAAGA...TGGTAGCGGCTTCAGAAGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCAAAGTGCTTAGAGAGTaGCAGAGAAAGGTGCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LHLWFQAFPKPELQGLSTKVLRE*QRKVQN Trigger: GTTTTGCACCTTTCTCTGTCACTCTCTAAGCACTTT...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCTGTGGCATCATCTTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGCTGGGAACCTGCCTTTaGAGCCTGCCTCTTCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: QAVASSWLLDKLTLSLEKLGTCL*SLPLPA Trigger: GGCAGGAAGAGGCAGGCTGCAAAGGCAGGTTCCCAG...CTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCAGACCCGACATTCTACTTTATGCTACCTGTCTGTCTGCTCAAGATCACCTCAGCAATGGCTGGCTaGCTTGCTCCTTCCCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: ASDPTFYFMLPVCLLKITSAMAG*LAPSLT Trigger: AGTCAGGGAAGGAGCAAGGCAGCCAGCCATTGCTGA...GGTGATCTTGAGCAGACAGACAGGTAGCATAAAGTAGAATGTCGGGTCTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | ACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGTCTTCAAAGCTGCCAGGTaGGCGGAGCCCAGAGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TFPQGTFIKEEFVTQGQVFKAAR*AEPRES Trigger: GGACTCTCTGGGCTCCGCCCACCTGGCAGCTTTGAA...GACTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | ACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGTCGTGGGAAGGCAGCGATaGAGCAAGGACCACAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TFPQGTFIKEEFVTQGQVVGRQR*SKDHSF Trigger: GAAGCTGTGGTCCTTGCTTCATCGCTGCCTTCCCAC...GACTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | ACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGTCAGACATGGGCGGGAGTaGGAAGGCAGCGATGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TFPQGTFIKEEFVTQGQVRHGRE*EGSDEA Trigger: TGCTTCATCGCTGCCTTCCCACTCCCGCCCATGTCT...GACTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGTGGGACAAAACAACAAGAAACTGTTCCACCCCCTTGGAGACCAGAGGGACTTCCAAAGTTTCTCTaGGAGACAGCAAAGGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSGTKQQETVPPPWRPEGLPKFL*ETAKDQ Trigger: CTGGTCCTTTGCTGTCTCTCAGAGAAACTTTGGAAG...TCCCTCTGGTCTCCAAGGGGGTGGAACAGTTTCTTGTTGTTTTGTCCCACTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTGTGGCATCATCTTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGCCTGTTCTCAGGGGTTaGGAAGCAGATGAGAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: QAVASSWLLDKLTLSLEKPVLRG*EADESC Trigger: GCAGCTCTCATCTGCTTCTCAACCCCTGAGAACAGG...CTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGGGCAGCCAGTCCTGAGATCTTCCCTGAGACCCTaGCCTCAAGTTCTGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LAFRQIDSQLGEGQPVLRSSLRP*PQVLLL Trigger: GAGAAGCAGAACTTGAGGTCAGGGTCTCAGGGAAGA...TCTCAGGACTGGCTGCCCTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | ACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGTCAGTGCAGTGAGTACCTaGAAATCCCTGGGGTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: TFPQGTFIKEEFVTQGQVSAVST*KSLGSA Trigger: GGCAGACCCCAGGGATTTCCAGGTACTCACTGCACT...GACTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGGGCAGCCAGTCCTGAGAAGCAGAGAGACAAACTaGCCCAGCTTTTTCTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LAFRQIDSQLGEGQPVLRSRETN*PSFFWG Trigger: CCCCCAGAAAAAGCTGGGCCAGTTTGTCTCTCTGCT...TCTCAGGACTGGCTGCCCTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGGCTGGGACTGGGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTGCTGTGGCATCATCTTaGCTTTTAGACAAATTGACT | + |
|
Preference number: 2 (lower is better) Translates to: GWAGTGESSECRQPYHFPAVASS*LLDKLT Trigger: AGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGC...AGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | GGATGTTTCAGCACTCCTCAGCTACGATTTGAGGAAGGAATCAGTTTTGCCCAAGAGCCTGAACACTGGTaGCCTAGACTCTTCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: GCFSTPQLRFEEGISFAQEPEHW*PRLFHL Trigger: CAGATGGAAGAGTCTAGGTCACCAGTGTTCAGGCTC...TTGGGCAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAGTGCTGAAACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCCCCAGGCTGTGGCATCATCTTGGCTTTTAGACAAATTGACTCTCAGCTTTGCTACCTGTCTGTCTaGTCAAGATCACCTGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QAPGCGIILAFRQIDSQLCYLSV*SRSPVL Trigger: GAGAACAGGTGATCTTGAGCAGACAGACAGGTAGCA...AAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTGGGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | GGATGTTTCAGCACTCCTCAGCTACGATTTGAGGAAGGAATCAGTTTTGCCCAACCCAAGACAGCCCTCTaGTCCCCTTCAAGTACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GCFSTPQLRFEEGISFAQPKTAL*SPSSTF Trigger: AAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGG...TTGGGCAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAGTGCTGAAACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | AAACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGCCCACATACCATGTCTaGTCCAGAGAGCAGGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KHSHRVHSSKRNLSPKAKPTYHV*SREQAK Trigger: CTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGG...CTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTGTGGCATCATCTTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGCTTCCAAAGTTTCTCTaGGAGACAGCAAAGGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: QAVASSWLLDKLTLSLEKLPKFL*ETAKDQ Trigger: CTGGTCCTTTGCTGTCTCTCAGAGAAACTTTGGAAG...CTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR GCA 90 bp | ACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGTCTGCTACCTGTCTGTCTaGTCAAGATCACCTGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: TFPQGTFIKEEFVTQGQVCYLSV*SRSPVL Trigger: GAGAACAGGTGATCTTGAGCAGACAGACAGGTAGCA...GACTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CCA 90 bp | AAACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGAGGTCCCTCAGTCCATaGTACATTCAAGACCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KHSHRVHSSKRNLSPKAKRSLSP*YIQDLL Trigger: GAGGAGGTCTTGAATGTACCATGGACTGAGGGACCT...CTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR GCA 72 bp | CCTCTGTGGGTGTTCGGGCCACCCGAGGAGCTTCCATaGTGGTCGAAAGCACGCTGGGTGCCGGGTCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLWVFGPPEELP*WSKARWVPGQD Trigger: ATCCTGACCCGGCACCCAGCGTGCTTTCGACCAGCATGGAAGCTCCTCGGGTGGCCCGAACACCCACAGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | GCGTCTCGGGCCTTGATCTCCCCTTCTCTGGCGCACTaGGCAGCTGTTCAGGCCCAGTTCAGGGCCTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: ASRALISPSLAH*AAVQAQFRACT Trigger: AGTGCAGGCCCTGAACTGGGCCTGAACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR GCA 72 bp | CCTGAGAGGCAGGCAGCTAGCTCTGTAGTCAGCCACTaGCCCAGCTTGGCTGCCTTCCTCCCTACCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PERQAASSVVSH*PSLAAFLPTLL Trigger: GAGCAGGGTAGGGAGGAAGGCAGCCAAGCTGGGGCAGTGGCTGACTACAGAGCTAGCTGCCTGCCTCTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | CTGTGGGTGTTCGGGCCACCCGAGGAGCTTCCATGCTaGTCGAAAGCACGCTGGGTGCCGGGTCAGGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LWVFGPPEELPC*SKARWVPGQDV Trigger: AACATCCTGACCCGGCACCCAGCGTGCTTTCGACCAGCATGGAAGCTCCTCGGGTGGCCCGAACACCCACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | GGATTCCCTGCCTGGGAGCCCAGACATGGGCGGGAGTaGGAAGGCAGCGATGAAGCAAGGACCACAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GFPAWEPRHGRE*EGSDEARTTAS Trigger: GGAAGCTGTGGTCCTTGCTTCATCGCTGCCTTCCCACTCCCGCCCATGTCTGGGCTCCCAGGCAGGGAATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCCACTAGGTGGAGAGTCTCGGCCCCAGCTCCCATGGAAGGAGCCTCATACCGAGTTCGTCAGGCTTaGACAACTGGAAGCTGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: GPTRWRVSAPAPMEGASYRVRQA*TTGSWP Trigger: CGGCCAGCTTCCAGTTGTCAAAGCCTGACGAACTCG...GTATGAGGCTCCTTCCATGGGAGCTGGGGCCGAGACTCTCCACCTAGTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGATCAGATCGGATTCCCTGCCTGGGAGCCCAGACATGGGCGGGAGTGGGATCTGGGAACCTGCCTTaGCAGCCTGCCTCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ERSDRIPCLGAQTWAGVGSGNLP*QPASSC Trigger: GCAGGAAGAGGCAGGCTGCAAAGGCAGGTTCCCAGA...TCCCACTCCCGCCCATGTCTGGGCTCCCAGGCAGGGAATCCGATCTGATCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR GCA 72 bp | CTGGGAACCTGCCTTTGCAGCCTGCCTCTTCCTGCCTaGACACACCTCACCTCTAGGTCCAGCTGGCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LGTCLCSLPLPA*THLTSRSSWQT Trigger: GGTCTGCCAGCTGGACCTAGAGGTGAGGTGTGTGCAGGCAGGAAGAGGCAGGCTGCAAAGGCAGGTTCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | TGCTTCTCCATGCTCCAGGGACCCAAGACAGCCCTCTaGTCCCCTTCAAGTACCTTTGCGACCTCCGGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CFSMLQGPKTAL*SPSSTFATSGA Trigger: GGCCCCGGAGGTCGCAAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATGGAGAAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | GCCTGCACTGCTCCAACCTCCTGTATTCACCCTCTGTaGGTGTTCGGGCCACCCGAGGAGCTTCCATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ACTAPTSCIHPL*VFGPPEELPCW Trigger: CCAGCATGGAAGCTCCTCGGGTGGCCCGAACACCCACAGAGGGTGAATACAGGAGGTTGGAGCAGTGCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | TGGGAAGGCAGCGATGAAGCAAGGACCACAGCTTCCTaGTCTGTGTCCCAGGCGTCTCGGGCCTTGATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WEGSDEARTTAS*SVSQASRALIS Trigger: GGAGATCAAGGCCCGAGACGCCTGGGACACAGACCAGGAAGCTGTGGTCCTTGCTTCATCGCTGCCTTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCAGGGCGTTCCTCTGCTaGCCTGGCCTCAGCACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LHLWFQAFPKPELQGLSTRAFLC*PGLSTK Trigger: CTTTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCT...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR GCA 72 bp | GGGGTTGAGAAGCAGATGAGAGCTGCAGTCGGCTACTaGCTCAGCAATGGCTGGCTGCCTTGCTCCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GVEKQMRAAVGY*LSNGWLPCSFP Trigger: AGGGAAGGAGCAAGGCAGCCAGCCATTGCTGAGGCAGTAGCCGACTGCAGCTCTCATCTGCTTCTCAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR GCA 72 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTaGCTGGCCTCAGCACAAAGGAGAGATCAGATCGGA | + |
|
Preference number: 3 (lower is better) Translates to: PTLLPDRGRSSA*LASAQRRDQIG Trigger: TCCGATCTGATCTCTCCTTTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | CCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTaGCCTCAGCACAAAGGAGAGATCAGATCGGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: PCSQIEGVPLLA*PQHKGEIRSDS Trigger: GGAATCCGATCTGATCTCTCCTTTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | CCCGAGGAGCTTCCATGCTGGTCGAAAGCACGCTGGGTGCCGGGTCAGGATGTTAGACCAACACCCTCATaGCCATTTCTAGCTGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PEELPCWSKARWVPGQDVRPTPS*PFLAGA Trigger: AGCACCAGCTAGAAATGGCAATGAGGGTGTTGGTCT...AACATCCTGACCCGGCACCCAGCGTGCTTTCGACCAGCATGGAAGCTCCTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTAAATTGACTCTCAGCTaGGAGAAGGGCAGCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RGPGPHTMSAPESRQSRAKLTLS*EKGSQS Trigger: GGACTGGCTGCCCTTCTCCAAGCTGAGAGTCAATTT...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | AAGAGGGAGAGCAGCAGTGCAAAGGAGAGGCTGGGCTaGGACTGGGGAGTCATCCGAATGCAGACAGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: KRESSSAKERLG*DWGVIRMQTAI Trigger: TATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCCTCTCCTTTGCACTGCTGCTCTCCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | CCCCAAAGGCTCAATGGTTCTGGGATGCTGGGCAACTaGTGGAGTAAGACGCAGGTAGGTGGTTGCGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQRLNGSGMLGN*WSKTQVGGCVG Trigger: CCCAACGCAACCACCTACCTGCGTCTTACTCCATCAGTTGCCCAGCATCCCAGAACCATTGAGCCTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR GCA 72 bp | GTTCGTCAGGCTTTGACAACTGGAAGCTGGCCGCTGTaGTTCTGTGGGAGCCTGAACACTGGTGACCTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VRQALTTGSWPL*FCGSLNTGDLD Trigger: GTCTAGGTCACCAGTGTTCAGGCTCCCACAGAAGCACAGCGGCCAGCTTCCAGTTGTCAAAGCCTGACGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR GCA 72 bp | AGCTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTaGTTAGAGAGTGACAGAGAAAGGTGCAAAACCGCG | + |
|
Preference number: 3 (lower is better) Translates to: SSRACPPAVQVK*LESDRERCKTA Trigger: CGCGGTTTTGCACCTTTCTCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | GCTAACCGAGTTCGTCAGGCTTTGACAACTGGAAGCTaGCCGCTGTGCTTCTGTGGGAGCCTGAACACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ANRVRQALTTGS*PLCFCGSLNTG Trigger: ACCAGTGTTCAGGCTCCCACAGAAGCACAGCGGCCAGCTTCCAGTTGTCAAAGCCTGACGAACTCGGTTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAACTCCTCAGCTACGATTaGAGGAAGGAATCAGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PTLLPDRGRSSACLASAQLLSYD*RKESVL Trigger: CAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAG...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | CTGGCCGCTGTGCTTCTGTGGGAGCCTGAACACTGGTaGCCTAGACTCTTCCATCTGACAGTCTCTAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAAVLLWEPEHW*PRLFHLTVSKP Trigger: AGGCTTAGAGACTGTCAGATGGAAGAGTCTAGGTCACCAGTGTTCAGGCTCCCACAGAAGCACAGCGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | TGGGCGGAGCCCAGAGAGTCCAAGTCCATACAAATGTaGAGTGATGACAAAGCCCAACAGGCCCCAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WAEPRESKSIQM*SDDKAQQAPGC Trigger: ACAGCCTGGGGCCTGTTGGGCTTTGTCATCACTTCACATTTGTATGGACTTGGACTCTCTGGGCTCCGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | GTCATCCGAATGCAGACAGCCATATCATTTCCCTTCTaGAGCCGCTACCATGCAAGACTCCGGGGTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VIRMQTAISFPF*SRYHARLRGPG Trigger: GCCAGGACCCCGGAGTCTTGCATGGTAGCGGCTTCAGAAGGGAAATGATATGGCTGTCTGCATTCGGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTGACAGAGCCAGCAGCCCCGTTTaGCATTTAACAATGTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSRACPPAVQVKCLESDRASSPV*HLTMSQ Trigger: TTGGGACATTGTTAAATGCAAAACGGGGCTGCTGGC...TCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGCCAGAGAGCTCAGTGGGACAAAACAACAAGAAACTGTTCCACCCCCTTGAGCCAGCTCTCTGATTaGACCCATGAGCTGCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: GCQRAQWDKTTRNCSTPLSQLSD*THELHL Trigger: CAGGTGCAGCTCATGGGTCAAATCAGAGAGCTGGCT...CAAGGGGGTGGAACAGTTTCTTGTTGTTTTGTCCCACTGAGCTCTCTGGCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | CTCAAGATCACCTGTTCTCAGGGGTTGAGAAGCAGATaGGAGCTGCAGTCGGCTACTGCCTCAGCAATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LKITCSQGLRSR*ELQSATASAMA Trigger: AGCCATTGCTGAGGCAGTAGCCGACTGCAGCTCTCATCTGCTTCTCAACCCCTGAGAACAGGTGATCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | CTGTCTGTCTGCTCAAGATCACCTGTTCTCAGGGGTTaGGAAGCAGATGAGAGCTGCAGTCGGCTACTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSVCSRSPVLRG*EADESCSRLLP Trigger: AGGCAGTAGCCGACTGCAGCTCTCATCTGCTTCTCAACCCCTGAGAACAGGTGATCTTGAGCAGACAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR GCA 72 bp | CTTCCCAGCCCTTTGCTGTCTGCTGTAGACAACTTGTaGAGCTTGTTCATACACCCAGCAAGCAAGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPSPLLSAVDNL*SLFIHPASKGL Trigger: CAGCCCCTTGCTTGCTGGGTGTATGAACAAGCTGCACAAGTTGTCTACAGCAGACAGCAAAGGGCTGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | CAGTGGGAGACAGAGGAGCTAGCCAGCTCTCTGATTTaGCCCATGAGCTGCACCTGTAACAATCATGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QWETEELASSLI*PMSCTCNNHVP Trigger: AGGCACATGATTGTTACAGGTGCAGCTCATGGGTCAAATCAGAGAGCTGGCTAGCTCCTCTGTCTCCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGCCAGAGAGCTCAGTGGGACAAAACAACAAGAAACTGTTCCACCCCCTTGAGACCAACACCCTCATaGCCATTTCTAGCTGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GCQRAQWDKTTRNCSTPLRPTPS*PFLAGA Trigger: AGCACCAGCTAGAAATGGCAATGAGGGTGTTGGTCT...CAAGGGGGTGGAACAGTTTCTTGTTGTTTTGTCCCACTGAGCTCTCTGGCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | ACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGTCTCTGGGAACCTGCCTTaGCAGCCTGCCTCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TFPQGTFIKEEFVTQGQVSGNLP*QPASSC Trigger: GCAGGAAGAGGCAGGCTGCAAAGGCAGGTTCCCAGA...GACTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTGACAGACTCCTCAGCTACGATTaGAGGAAGGAATCAGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSRACPPAVQVKCLESDRLLSYD*RKESVL Trigger: CAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAG...TCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCAGACCCGACATTCTACTTTATGCTACCTGTCTGTCTGCTCAAGATCACCACACTTCCCAGCCCTTaGCTGTCTGCTGTAGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASDPTFYFMLPVCLLKITTLPSP*LSAVDN Trigger: GTTGTCTACAGCAGACAGCAAAGGGCTGGGAAGTGT...GGTGATCTTGAGCAGACAGACAGGTAGCATAAAGTAGAATGTCGGGTCTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTTTCGGGGAATTAACTTaGCCATTTAAAGCACCAATA | + |
|
Preference number: 3 (lower is better) Translates to: RGPGPHTMSAPESRQSRAFGELT*PFKAPI Trigger: TATTGGTGCTTTAAATGGCAAAGTTAATTCCCCGAA...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | GGGAGCCTGAACACTGGTGACCTAGACTCTTCCATCTaGCAGTCTCTAAGCCTGAACTCTCTCATCCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: GSLNTGDLDSSI*QSLSLNSLIQL Trigger: GAGTTGGATGAGAGAGTTCAGGCTTAGAGACTGTCAGATGGAAGAGTCTAGGTCACCAGTGTTCAGGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | CGGGTCAGGATGTTTCAGCACTCCTCAGCTACGATTTaGGGAAGGAATCAGTTTTGCCCAAGGTTCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RVRMFQHSSATI*GRNQFCPRFQS Trigger: GCTCTGGAACCTTGGGCAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAGTGCTGAAACATCCTGACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | CTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTaGCAGAGAAAGGTGCAAAACCGCGTGAAGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSTCRPGKVLRE*QRKVQNRVKQN Trigger: ATTCTGCTTCACGCGGTTTTGCACCTTTCTCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | TGCTCCAGAGAGCAGGCAAAGCAGAGCTGGGTTGCTTaGGTCGGGATCAAGGACACAGAAATAGACAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: CSREQAKQSWVA*VGIKDTEIDKS Trigger: ACTCTTGTCTATTTCTGTGTCCTTGATCCCGACTCAAGCAACCCAGCTCTGCTTTGCCTGCTCTCTGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR TCA 72 bp | TACCTACTATGCTCGGTGGAAGTCAATGCTTCCAGGTaGAAGATGTCAGGTGAGCAACTACCTGCCCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: YLLCSVEVNASR*KMSGEQLPAPK Trigger: TTTAGGGGCAGGTAGTTGCTCACCTGACATCTTTCACCTGGAAGCATTGACTTCCACCGAGCATAGTAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CCA 72 bp | TTTCTCTGGTCCAGACACACTACCTACTATGCTCGGTaGAAGTCAATGCTTCCAGGTGAAAGATGTCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FLWSRHTTYYAR*KSMLPGERCQV Trigger: CACCTGACATCTTTCACCTGGAAGCATTGACTTCCACCGAGCATAGTAGGTAGTGTGTCTGGACCAGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR-3UTR CAA 90 bp | AAACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGGCCAGCAGCCCCGTTTaGCATTTAACAATGTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KHSHRVHSSKRNLSPKAKASSPV*HLTMSQ Trigger: TTGGGACATTGTTAAATGCAAAACGGGGCTGCTGGC...CTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR TCA 90 bp | GTCCCAGGCGTCTCGGGCCTTGATCTCCCCTTCTCTGGCGCACTGGGCAGCTGTCCTTCTGGTCCCGGGTaGTATTGGTCAGGGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VPGVSGLDLPFSGALGSCPSGPG*YWSGRR Trigger: GCGCCTCCCTGACCAATATCACCCGGGACCAGAAGG...ACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR TCA 90 bp | TGCACACACCTCACCTCTAGGTCCAGCTGGCAGACCCCAACCACGCCAGGCTGTCCTTCTGGTCCCGGGTaGTATTGGTCAGGGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CTHLTSRSSWQTPTTPGCPSGPG*YWSGRR Trigger: GCGCCTCCCTGACCAATATCACCCGGGACCAGAAGG...ACAGCCTGGCGTGGTTGGGGTCTGCCAGCTGGACCTAGAGGTGAGGTGTGTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GGCCCCACTAGGTGGAGAGTCTCGGCCCCAGCTCCCATGGAAGGAGCCTCATACGGAGGCTCACGGCAGTaGGGTTCAGGACCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPTRWRVSAPAPMEGASYGGSRQ*GSGPSG Trigger: ACCAGAAGGTCCTGAACCCCACTGCCGTGAGCCTCC...GTATGAGGCTCCTTCCATGGGAGCTGGGGCCGAGACTCTCCACCTAGTGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GGCCCCACTAGGTGGAGAGTCTCGGCCCCAGCTCCCATGGAAGGAGCCTCATACGAGGTTGCCGTGGCATaGGTGGCGTATGGCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPTRWRVSAPAPMEGASYEVAVA*VAYGTG Trigger: ACCTGTGCCATACGCCACCCATGCCACGGCAACCTC...GTATGAGGCTCCTTCCATGGGAGCTGGGGCCGAGACTCTCCACCTAGTGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS-3UTR GCA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCGGGAAGAGGGCTCCCTaGCCCGTGTTTCCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLWFQAFPKPELQGLSTGKRAP*PVFPVQ Trigger: CTGCACTGGAAACACGGGGCAGGGAGCCCTCTTCCC...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| 3UTR CAA 72 bp | CCCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTaGCCTGGCCTCAGCACAAAGGAGAGATCAGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: PYPAPRSRAFLC*PGLSTKERSDR Trigger: CCGATCTGATCTCTCCTTTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR TCA 90 bp | GGCCCCACTAGGTGGAGAGTCTCGGCCCCAGCTCCCATGGAAGGAGCCTCATACCATTGGCGCTGCCATTaGGCTGTGCCAGTTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPTRWRVSAPAPMEGASYHWRCH*AVPVDS Trigger: AGAATCAACTGGCACAGCTCAATGGCAGCGCCAATG...GTATGAGGCTCCTTCCATGGGAGCTGGGGCCGAGACTCTCCACCTAGTGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR TCA 90 bp | CATGCTCCAGGGACCCAAGACAGCCCTCTGGTCCCCTTCAAGTACCTTTGCGACTGGCATTTACAGGGGTaGTGGGAAGAGGGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAPGTQDSPLVPFKYLCDWHLQG*WEEGSL Trigger: CAGGGAGCCCTCTTCCCATCACCCCTGTAAATGCCA...GTCGCAAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGCTGGGACTGGGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTGGAGGCTCACGGCAGTaGGGTTCAGGACCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWAGTGESSECRQPYHFPGGSRQ*GSGPSG Trigger: ACCAGAAGGTCCTGAACCCCACTGCCGTGAGCCTCC...AGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTGCTTCTTTGTCAGAGTaGTCGGGGACAGGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGPGPHTMSAPESRQSRAASLSE*SGTGGT Trigger: TGTGCCACCTGTCCCCGACCACTCTGACAAAGAAGC...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | CATGCTCCAGGGACCCAAGACAGCCCTCTGGTCCCCTTCAAGTACCTTTGCGACGCTTCTTTGTCAGAGTaGTCGGGGACAGGTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HAPGTQDSPLVPFKYLCDASLSE*SGTGGT Trigger: TGTGCCACCTGTCCCCGACCACTCTGACAAAGAAGC...GTCGCAAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTGACAGAGGCATGGGTGGCGTATaGCACAGGTGGCATTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSRACPPAVQVKCLESDRGMGGV*HRWHLQ Trigger: CTGTAAATGCCACCTGTGCCATACGCCACCCATGCC...TCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GGGTGCCAGAGAGCTCAGTGGGACAAAACAACAAGAAACTGTTCCACCCCCTTGTTGCCGTGGCATGGGTaGCGTATGGCACAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCQRAQWDKTTRNCSTPLLPWHG*RMAQVA Trigger: TGCCACCTGTGCCATACGCCACCCATGCCACGGCAA...CAAGGGGGTGGAACAGTTTCTTGTTGTTTTGTCCCACTGAGCTCTCTGGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGCTGGGACTGGGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTCATTGGCGCTGCCATTaGGCTGTGCCAGTTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWAGTGESSECRQPYHFPHWRCH*AVPVDS Trigger: AGAATCAACTGGCACAGCTCAATGGCAGCGCCAATG...AGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCCCAGTCCCAGCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GGCCCCACTAGGTGGAGAGTCTCGGCCCCAGCTCCCATGGAAGGAGCCTCATACCCCAACTTTTTCCTTTaGAAGGCTTCTTTGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPTRWRVSAPAPMEGASYPNFFL*KASLSE Trigger: CTCTGACAAAGAAGCCTTCCAAAGGAAAAAGTTGGG...GTATGAGGCTCCTTCCATGGGAGCTGGGGCCGAGACTCTCCACCTAGTGGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GAGAGATCAGATCGGATTCCCTGCCTGGGAGCCCAGACATGGGCGGGAGTGGGATATGTCCCCAGAAGCTaGCAACCCAACTTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERSDRIPCLGAQTWAGVGYVPRS*QPNFFL Trigger: AAGGAAAAAGTTGGGTTGCCAGCTTCTGGGGACATA...TCCCACTCCCGCCCATGTCTGGGCTCCCAGGCAGGGAATCCGATCTGATCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CAA 72 bp | GGGAACTGCATAGAAGCTAACCGAGTTCGTCAGGCTTaGACAACTGGAAGCTGGCCGCTGTGCTTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNCIEANRVRQA*TTGSWPLCFCG Trigger: CCCACAGAAGCACAGCGGCCAGCTTCCAGTTGTCAAAGCCTGACGAACTCGGTTAGCTTCTATGCAGTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GGGTGCCAGAGAGCTCAGTGGGACAAAACAACAAGAAACTGTTCCACCCCCTTGGCTTTTCCACGTTGTTaGGAAACGGCTCCCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCQRAQWDKTTRNCSTPLAFPRC*ETAPLE Trigger: CTCAAGGGGAGCCGTTTCCCAACAACGTGGAAAAGC...CAAGGGGGTGGAACAGTTTCTTGTTGTTTTGTCCCACTGAGCTCTCTGGCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGGGACAAAACAACAAGAAACTGTTCCACCCCCTTGGAGACCAGAGGGAGGGTTCAGGACCTTCTaGTCCCGGGTGATATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSGTKQQETVPPPWRPEGGFRTF*SRVILV Trigger: GACCAATATCACCCGGGACCAGAAGGTCCTGAACCC...TCCCTCTGGTCTCCAAGGGGGTGGAACAGTTTCTTGTTGTTTTGTCCCACTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CAA 72 bp | AGCCCTTTGCTGTCTGCTGTAGACAACTTGTGCAGCTaGTTCATACACCCAGCAAGCAAGGGGCTGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLSAVDNLCS*FIHPASKGLSE Trigger: CTCACTCAGCCCCTTGCTTGCTGGGTGTATGAACAAGCTGCACAAGTTGTCTACAGCAGACAGCAAAGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CAA 72 bp | CTGCTCCAGAGAGCAGGCAAAGCAGAGCTGGGTTGCTaGAGTCGGGATCAAGGACACAGAAATAGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLQRAGKAELGC*SRDQGHRNRQE Trigger: CTCTTGTCTATTTCTGTGTCCTTGATCCCGACTCAAGCAACCCAGCTCTGCTTTGCCTGCTCTCTGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTTTGCTGTCTGCTGTAGACAACTTGTGCAGCTTGTTCATACACCCAGCGCTTTTCCACGTTGTTaGGAAACGGCTCCCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVCCRQLVQLVHTPSAFPRC*ETAPLE Trigger: CTCAAGGGGAGCCGTTTCCCAACAACGTGGAAAAGC...GCTGGGTGTATGAACAAGCTGCACAAGTTGTCTACAGCAGACAGCAAAGGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GGGAGTCATCCGAATGCAGACAGCCATATCATTTCCCTTCTGAAGCCGCTACCAACAGCTCCACCAACTTaGTCTTCTCTGTCCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSHPNADSHIISLLKPLPTAPPT*SSLSRC Trigger: GCAACGGGACAGAGAAGACCAAGTTGGTGGAGCTGT...TGGTAGCGGCTTCAGAAGGGAAATGATATGGCTGTCTGCATTCGGATGACTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCCCCAACTTTTTCCTTTaGAAGGCTTCTTTGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLWFQAFPKPELQGLSTPNFFL*KASLSE Trigger: CTCTGACAAAGAAGCCTTCCAAAGGAAAAAGTTGGG...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CAA 72 bp | GGCTGTATAGAAGCTCTGCCTATGGAAGTTTCAACTTaGCCAGATTCCATCATGGCCCAGCCCAGAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCIEALPMEVST*PDSIMAQPRVQ Trigger: CTGCACTCTGGGCTGGGCCATGATGGAATCTGGCAAAGTTGAAACTTCCATAGGCAGAGCTTCTATACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CAA 72 bp | CCGGGTCAGGATGTTTCAGCACTCCTCAGCTACGATTaGAGGAAGGAATCAGTTTTGCCCAAGGTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGQDVSALLSYD*RKESVLPKVPE Trigger: CTCTGGAACCTTGGGCAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAGTGCTGAAACATCCTGACCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGTGGCATCATCTTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGGGGTTCAGGACCTTCTaGTCCCGGGTGATATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAVASSWLLDKLTLSLEKGFRTF*SRVILV Trigger: GACCAATATCACCCGGGACCAGAAGGTCCTGAACCC...CTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CAA 72 bp | GACAAAGCCCAACAGGCCCCAGGCTGTGGCATCATCTaGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DKAQQAPGCGII*AFRQIDSQLGE Trigger: TTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTGGGGCCTGTTGGGCTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGATTCCTTCTGGATCCCAGTCCCCTTAGCTCTCTCACATCCCAACCAAGCTATGTCCCCAGAAGCTaGCAACCCAACTTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGFLLDPSPLSSLTSQPSYVPRS*QPNFFL Trigger: AAGGAAAAAGTTGGGTTGCCAGCTTCTGGGGACATA...GCTTGGTTGGGATGTGAGAGAGCTAAGGGGACTGGGATCCAGAAGGAATCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | AAACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGTTCATGAGGTTGCCGTaGCATGGGTGGCGTATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KHSHRVHSSKRNLSPKAKFMRLP*HGWRMA Trigger: TGCCATACGCCACCCATGCCACGGCAACCTCATGAA...CTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS-3UTR TCA 90 bp | CAGGCCCCAGGCTGTGGCATCATCTTGGCTTTTAGACAAATTGACTCTCAGCTTTTGAGCTGTGCCAGTTaGTTCTTGATCTGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QAPGCGIILAFRQIDSQLLSCAS*FLIWFM Trigger: CATGAACCAGATCAAGAATCAACTGGCACAGCTCAA...AAGCTGAGAGTCAATTTGTCTAAAAGCCAAGATGATGCCACAGCCTGGGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS-3UTR GCA 90 bp | TCTCATCCAACTCAAGAGAAGACACATTCCATCATTCCACCCCAGGGTACCCTTGCTGCCATTGAGCTGTaGCAGTTGATTCTTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHPTQEKTHSIIPPQGTLAAIEL*QLILDL Trigger: CAGATCAAGAATCAACTGGCACAGCTCAATGGCAGC...AAGGGTACCCTGGGGTGGAATGATGGAATGTGTCTTCTCTTGAGTTGGATGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR GCA 90 bp | TTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGGGCAGCCAGTCCTGAGAGCTGCCATTGAGCTGTaGCAGTTGATTCTTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAFRQIDSQLGEGQPVLRAAIEL*QLILDL Trigger: CAGATCAAGAATCAACTGGCACAGCTCAATGGCAGC...TCTCAGGACTGGCTGCCCTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | TCTCATCCAACTCAAGAGAAGACACATTCCATCATTCCACCCCAGGGTACCCTTGTTGCCATGGAAAGATaGGAAGTCTGTCATGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHPTQEKTHSIIPPQGTLVAMER*EVCHVR Trigger: CCTAACATGACAGACTTCCCATCTTTCCATGGCAAC...AAGGGTACCCTGGGGTGGAATGATGGAATGTGTCTTCTCTTGAGTTGGATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CCA 90 bp | GGATGTTTCAGCACTCCTCAGCTACGATTTGAGGAAGGAATCAGTTTTGCCCAAGTTGCCATGGAAAGATaGGAAGTCTGTCATGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCFSTPQLRFEEGISFAQVAMER*EVCHVR Trigger: CCTAACATGACAGACTTCCCATCTTTCCATGGCAAC...TTGGGCAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAGTGCTGAAACATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| 3UTR CAA 72 bp | AAACATTCCCACAGGGTACATTCATCAAAGAGGAATTaGTCACCCAAGGCCAAGTCCCTTCCAAAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHSHRVHSSKRN*SPKAKSLPKER Trigger: CCTTTCCTTTGGAAGGGACTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS TCA 90 bp | CCTGGAGGCTCACGGCAGTGGGGTTCAGGACCTTCTGGTCCCGGGTaGTATTGGTCAGGGAGGCGCTCAGGTATGCGACCATCCGATACA | + |
|
Preference number: 5 (lower is better) Translates to: PGGSRQWGSGPSGPG*YWSGRRSGMRPSDT Trigger: TGTATCGGATGGTCGCATACCTGAGCGCCTCCCTGACCAATATCACCCGGGACCAGAAGGTCCTGAACCCCACTGCCGTGAGCCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 90 bp | TTGAGCTTGACCTGGAGGCTCACGGCAGTGGGGTTCAGGACCTTCTaGTCCCGGGTGATATTGGTCAGGGAGGCGCTCAGGTATGCGACC | + |
|
Preference number: 5 (lower is better) Translates to: LSLTWRLTAVGFRTF*SRVILVREALRYAT Trigger: GGTCGCATACCTGAGCGCCTCCCTGACCAATATCACCCGGGACCAGAAGGTCCTGAACCCCACTGCCGTGAGCCTCCAGGTCAAGCTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | GAGAGATCAGATCGGATTCCCTGCCTGGGAGCCCAGACATGGGCGGGAGTGGGATGGCCCACACGGTACTaGTTGCACAGACGGCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ERSDRIPCLGAQTWAGVGWPTRY*LHRRQS Trigger: GCTTTGCCGTCTGTGCAACAAGTACCGTGTGGGCCA...TCCCACTCCCGCCCATGTCTGGGCTCCCAGGCAGGGAATCCGATCTGATCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS GCA 90 bp | TTTACAGGGGTGATGGGAAGAGGGCTCCCTGCCCCGTGTTTCCAGTaGAGAACCAGCAGCAGTAAGGGCACAATCCCTGCGGCCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: FTGVMGRGLPAPCFQ*RTSSSKGTIPAAKT Trigger: GGTCTTGGCCGCAGGGATTGTGCCCTTACTGCTGCTGGTTCTGCACTGGAAACACGGGGCAGGGAGCCCTCTTCCCATCACCCCTGTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS CCA 90 bp | CTGAGGAGGCCCCTCATGACGTCTATAGTAGCATTGAGCTTGACCTaGAGGCTCACGGCAGTGGGGTTCAGGACCTTCTGGTCCCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRRPLMTSIVALSLT*RLTAVGFRTFWSRV Trigger: CACCCGGGACCAGAAGGTCCTGAACCCCACTGCCGTGAGCCTCCAGGTCAAGCTCAATGCTACTATAGACGTCATGAGGGGCCTCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | GTCCCAGGCGTCTCGGGCCTTGATCTCCCCTTCTCTGGCGCACTGGGCAGCTGTGAAATGAAGAGAGCATaGGCGCTGCCATTGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPGVSGLDLPFSGALGSCEMKRA*ALPLSC Trigger: ACAGCTCAATGGCAGCGCCAATGCTCTCTTCATTTC...ACAGCTGCCCAGTGCGCCAGAGAAGGGGAGATCAAGGCCCGAGACGCCTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | CGGGGTCCTGGCCCACATACCATGTCTGCTCCAGAGAGCAGGCAAAGCAGAGCTTGGCCCACACGGTACTaGTTGCACAGACGGCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGPGPHTMSAPESRQSRAWPTRY*LHRRQS Trigger: GCTTTGCCGTCTGTGCAACAAGTACCGTGTGGGCCA...AGCTCTGCTTTGCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAAGTCTTCTCTGTCCCGTaGCCATGGAAAGATGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PTLLPDRGRSSACLASAQVFSVP*PWKDGK Trigger: CTTCCCATCTTTCCATGGCAACGGGACAGAGAAGAC...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAATACAGCTCCACCAACTaGGTCTTCTCTGTCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTLLPDRGRSSACLASAQYSSTN*VFSVPL Trigger: CAACGGGACAGAGAAGACCAAGTTGGTGGAGCTGTA...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | TGCACACACCTCACCTCTAGGTCCAGCTGGCAGACCCCAACCACGCCAGGCTGTTACAGCTCCACCAACTaGGTCTTCTCTGTCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTHLTSRSSWQTPTTPGCYSSTN*VFSVPL Trigger: CAACGGGACAGAGAAGACCAAGTTGGTGGAGCTGTA...ACAGCCTGGCGTGGTTGGGGTCTGCCAGCTGGACCTAGAGGTGAGGTGTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | CATGCTCCAGGGACCCAAGACAGCCCTCTGGTCCCCTTCAAGTACCTTTGCGACATCTGGTTCATGAGGTaGCCGTGGCATGGGTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: HAPGTQDSPLVPFKYLCDIWFMR*PWHGWR Trigger: ACGCCACCCATGCCACGGCAACCTCATGAACCAGAT...GTCGCAAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS GCA 90 bp | GACCTTCTGGTCCCGGGTGATATTGGTCAGGGAGGCGCTCAGGTATaGGACCATCCGATACAGCTCCACCAACTTGGTCTTCTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: DLLVPGDIGQGGAQV*DHPIQLHQLGLLCP Trigger: GGGACAGAGAAGACCAAGTTGGTGGAGCTGTATCGGATGGTCGCATACCTGAGCGCCTCCCTGACCAATATCACCCGGGACCAGAAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | CCTACCCTGCTCCCAGATCGAGGGCGTTCCTCTGCTTGCCTGGCCTCAGCACAAGAAATGAAGAGAGCATaGGCGCTGCCATTGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PTLLPDRGRSSACLASAQEMKRA*ALPLSC Trigger: ACAGCTCAATGGCAGCGCCAATGCTCTCTTCATTTC...TTGTGCTGAGGCCAGGCAAGCAGAGGAACGCCCTCGATCTGGGAGCAGGGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | CTGCATCTATGGTTCCAGGCCTTTCCTAAGCCAGAGCTCCAGGGCCTGTCCACCCCCACACGGTACTTGTaGCACAGACGGCAAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LHLWFQAFPKPELQGLSTPTRYL*HRRQST Trigger: TGTGCTTTGCCGTCTGTGCAACAAGTACCGTGTGGG...GGTGGACAGGCCCTGGAGCTCTGGCTTAGGAAAGGCCTGGAACCATAGATGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 90 bp | GGGAGGCGCTCAGGTATGCGACCATCCGATACAGCTCCACCAACTTaGTCTTCTCTGTCCCGTTGCCATGGAAAGATGGGAAGTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRRSGMRPSDTAPPT*SSLSRCHGKMGSLS Trigger: TGACAGACTTCCCATCTTTCCATGGCAACGGGACAGAGAAGACCAAGTTGGTGGAGCTGTATCGGATGGTCGCATACCTGAGCGCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 90 bp | AGCTGGCAACCCAACTTTTTCCTTTGGAAGGCTTCTTTGTCAGAGTaGTCGGGGACAGGTGGCACATCCACGTGGCCCACACGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SWQPNFFLWKASLSE*SGTGGTSTWPTRYL Trigger: CAAGTACCGTGTGGGCCACGTGGATGTGCCACCTGTCCCCGACCACTCTGACAAAGAAGCCTTCCAAAGGAAAAAGTTGGGTTGCCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 90 bp | CTGTGCCAGTTGATTCTTGATCTGGTTCATGAGGTTGCCGTGGCATaGGTGGCGTATGGCACAGGTGGCATTTACAGGGGTGATGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LCQLILDLVHEVAVA*VAYGTGGIYRGDGK Trigger: CTTCCCATCACCCCTGTAAATGCCACCTGTGCCATACGCCACCCATGCCACGGCAACCTCATGAACCAGATCAAGAATCAACTGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | CATGCTCCAGGGACCCAAGACAGCCCTCTGGTCCCCTTCAAGTACCTTTGCGACATTGAGCTGTGCCAGTaGATTCTTGATCTGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HAPGTQDSPLVPFKYLCDIELCQ*ILDLVH Trigger: ATGAACCAGATCAAGAATCAACTGGCACAGCTCAAT...GTCGCAAAGGTACTTGAAGGGGACCAGAGGGCTGTCTTGGGTCCCTGGAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | TTGGCTTTTAGACAAATTGACTCTCAGCTTGGAGAAGGGCAGCCAGTCCTGAGACCCACACGGTACTTGTaGCACAGACGGCAAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LAFRQIDSQLGEGQPVLRPTRYL*HRRQST Trigger: TGTGCTTTGCCGTCTGTGCAACAAGTACCGTGTGGG...TCTCAGGACTGGCTGCCCTTCTCCAAGCTGAGAGTCAATTTGTCTAAAAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAGGGCCTGTCCACCTGCCGTCCAGGTAAAGTGCTTAGAGAGTGACAGAACCCAACTTTTTCCTTaGGAAGGCTTCTTTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRACPPAVQVKCLESDRTQLFP*EGFFVR Trigger: TCTGACAAAGAAGCCTTCCAAAGGAAAAAGTTGGGT...TCTGTCACTCTCTAAGCACTTTACCTGGACGGCAGGTGGACAGGCCCTGGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 90 bp | ATCCGATACAGCTCCACCAACTTGGTCTTCTCTGTCCCGTTGCCATaGAAAGATGGGAAGTCTGTCATGTTAGGCGCACATAGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IRYSSTNLVFSVPLP*KDGKSVMLGAHSFS Trigger: GGAAAAGCTATGTGCGCCTAACATGACAGACTTCCCATCTTTCCATGGCAACGGGACAGAGAAGACCAAGTTGGTGGAGCTGTATCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 90 bp | GCCTGGACCACCACACTTATGACTTGCTTGTATGTCCCCAGAAGCTaGCAACCCAACTTTTTCCTTTGGAAGGCTTCTTTGTCAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AWTTTLMTCLYVPRS*QPNFFLWKASLSEW Trigger: CCACTCTGACAAAGAAGCCTTCCAAAGGAAAAAGTTGGGTTGCCAGCTTCTGGGGACATACAAGCAAGTCATAAGTGTGGTGGTCCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS GCA 90 bp | TGTGTAATAGGAAATGAAGAGAGCATTGGCGCTGCCATTGAGCTGTaGCAGTTGATTCTTGATCTGGTTCATGAGGTTGCCGTGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CVIGNEESIGAAIEL*QLILDLVHEVAVAW Trigger: CCATGCCACGGCAACCTCATGAACCAGATCAAGAATCAACTGGCACAGCTCAATGGCAGCGCCAATGCTCTCTTCATTTCCTATTACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | AAACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGCATAGCTTTTCCACGTaGTTGGGAAACGGCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KHSHRVHSSKRNLSPKAKHSFST*LGNGSP Trigger: AGGGGAGCCGTTTCCCAACAACGTGGAAAAGCTATG...CTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | AAACATTCCCACAGGGTACATTCATCAAAGAGGAATTTGTCACCCAAGGCCAAGGTCTTCTCTGTCCCGTaGCCATGGAAAGATGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KHSHRVHSSKRNLSPKAKVFSVP*PWKDGK Trigger: CTTCCCATCTTTCCATGGCAACGGGACAGAGAAGAC...CTTGGCCTTGGGTGACAAATTCCTCTTTGATGAATGTACCCTGTGGGAATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | GCCTCAGACCCGACATTCTACTTTATGCTACCTGTCTGTCTGCTCAAGATCACCACCCAACTTTTTCCTTaGGAAGGCTTCTTTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASDPTFYFMLPVCLLKITTQLFP*EGFFVR Trigger: TCTGACAAAGAAGCCTTCCAAAGGAAAAAGTTGGGT...GGTGATCTTGAGCAGACAGACAGGTAGCATAAAGTAGAATGTCGGGTCTGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS-3UTR CAA 90 bp | GGATGTTTCAGCACTCCTCAGCTACGATTTGAGGAAGGAATCAGTTTTGCCCAAATTGAGCTGTGCCAGTaGATTCTTGATCTGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GCFSTPQLRFEEGISFAQIELCQ*ILDLVH Trigger: ATGAACCAGATCAAGAATCAACTGGCACAGCTCAAT...TTGGGCAAAACTGATTCCTTCCTCAAATCGTAGCTGAGGAGTGCTGAAACATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 72 bp | ACCTGGAGGCTCACGGCAGTGGGGTTCAGGACCTTCTaGTCCCGGGTGATATTGGTCAGGGAGGCGCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TWRLTAVGFRTF*SRVILVREALR Trigger: CCTGAGCGCCTCCCTGACCAATATCACCCGGGACCAGAAGGTCCTGAACCCCACTGCCGTGAGCCTCCAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CAA 90 bp | AGGCTCACGGCAGTGGGGTTCAGGACCTTCTGGTCCCGGGTGATATaGGTCAGGGAGGCGCTCAGGTATGCGACCATCCGATACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLTAVGFRTFWSRVI*VREALRYATIRYSS Trigger: GGAGCTGTATCGGATGGTCGCATACCTGAGCGCCTCCCTGACCAATATCACCCGGGACCAGAAGGTCCTGAACCCCACTGCCGTGAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS TCA 72 bp | TCACGGCAGTGGGGTTCAGGACCTTCTGGTCCCGGGTaGTATTGGTCAGGGAGGCGCTCAGGTATGCGACCA | + |
|
Preference number: 6 (lower is better) Translates to: SRQWGSGPSGPG*YWSGRRSGMRP Trigger: TGGTCGCATACCTGAGCGCCTCCCTGACCAATATCACCCGGGACCAGAAGGTCCTGAACCCCACTGCCGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS GCA 72 bp | GTGATGGGAAGAGGGCTCCCTGCCCCGTGTTTCCAGTaGAGAACCAGCAGCAGTAAGGGCACAATCCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VMGRGLPAPCFQ*RTSSSKGTIPA Trigger: CGCAGGGATTGTGCCCTTACTGCTGCTGGTTCTGCACTGGAAACACGGGGCAGGGAGCCCTCTTCCCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS CAA 72 bp | GCAGTGGGGTTCAGGACCTTCTGGTCCCGGGTGATATaGGTCAGGGAGGCGCTCAGGTATGCGACCATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: AVGFRTFWSRVI*VREALRYATIR Trigger: TCGGATGGTCGCATACCTGAGCGCCTCCCTGACCAATATCACCCGGGACCAGAAGGTCCTGAACCCCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CAA 72 bp | GGGACAGGTGGCACATCCACGTGGCCCACACGGTACTaGTTGCACAGACGGCAAAGCACATTGCTGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTGGTSTWPTRY*LHRRQSTLLRR Trigger: CCTCCTCAGCAATGTGCTTTGCCGTCTGTGCAACAAGTACCGTGTGGGCCACGTGGATGTGCCACCTGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS GCA 72 bp | GTCCCGGGTGATATTGGTCAGGGAGGCGCTCAGGTATaGGACCATCCGATACAGCTCCACCAACTTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VPGDIGQGGAQV*DHPIQLHQLGL Trigger: AAGACCAAGTTGGTGGAGCTGTATCGGATGGTCGCATACCTGAGCGCCTCCCTGACCAATATCACCCGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CAA 72 bp | TTGCTGAGGAGGCCCCTCATGACGTCTATAGTAGCATaGAGCTTGACCTGGAGGCTCACGGCAGTGGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRRPLMTSIVA*SLTWRLTAVGF Trigger: GAACCCCACTGCCGTGAGCCTCCAGGTCAAGCTCAATGCTACTATAGACGTCATGAGGGGCCTCCTCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CAA 90 bp | AGGGAGGCGCTCAGGTATGCGACCATCCGATACAGCTCCACCAACTaGGTCTTCTCTGTCCCGTTGCCATGGAAAGATGGGAAGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: REALRYATIRYSSTN*VFSVPLPWKDGKSV Trigger: GACAGACTTCCCATCTTTCCATGGCAACGGGACAGAGAAGACCAAGTTGGTGGAGCTGTATCGGATGGTCGCATACCTGAGCGCCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 72 bp | CCCAACTTTTTCCTTTGGAAGGCTTCTTTGTCAGAGTaGTCGGGGACAGGTGGCACATCCACGTGGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PNFFLWKASLSE*SGTGGTSTWPT Trigger: TGTGGGCCACGTGGATGTGCCACCTGTCCCCGACCACTCTGACAAAGAAGCCTTCCAAAGGAAAAAGTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 72 bp | TTCTTGATCTGGTTCATGAGGTTGCCGTGGCATGGGTaGCGTATGGCACAGGTGGCATTTACAGGGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: FLIWFMRLPWHG*RMAQVAFTGVM Trigger: CATCACCCCTGTAAATGCCACCTGTGCCATACGCCACCCATGCCACGGCAACCTCATGAACCAGATCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS CAA 90 bp | GCGACCATCCGATACAGCTCCACCAACTTGGTCTTCTCTGTCCCGTaGCCATGGAAAGATGGGAAGTCTGTCATGTTAGGCGCACATAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATIRYSSTNLVFSVP*PWKDGKSVMLGAHS Trigger: GCTATGTGCGCCTAACATGACAGACTTCCCATCTTTCCATGGCAACGGGACAGAGAAGACCAAGTTGGTGGAGCTGTATCGGATGGTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
||
| CDS CCA 72 bp | TTGATTCTTGATCTGGTTCATGAGGTTGCCGTGGCATaGGTGGCGTATGGCACAGGTGGCATTTACAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LILDLVHEVAVA*VAYGTGGIYRG Trigger: ACCCCTGTAAATGCCACCTGTGCCATACGCCACCCATGCCACGGCAACCTCATGAACCAGATCAAGAATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS CAA 72 bp | GAAGAGAGCATTGGCGCTGCCATTGAGCTGTGCCAGTaGATTCTTGATCTGGTTCATGAGGTTGCCGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: EESIGAAIELCQ*ILDLVHEVAVA Trigger: TGCCACGGCAACCTCATGAACCAGATCAAGAATCAACTGGCACAGCTCAATGGCAGCGCCAATGCTCTCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS CAA 90 bp | ATAGGAAATGAAGAGAGCATTGGCGCTGCCATTGAGCTGTGCCAGTaGATTCTTGATCTGGTTCATGAGGTTGCCGTGGCATGGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: IGNEESIGAAIELCQ*ILDLVHEVAVAWVA Trigger: CGCCACCCATGCCACGGCAACCTCATGAACCAGATCAAGAATCAACTGGCACAGCTCAATGGCAGCGCCAATGCTCTCTTCATTTCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS TCA 72 bp | AAGAGAGCATTGGCGCTGCCATTGAGCTGTGCCAGTTaGTTCTTGATCTGGTTCATGAGGTTGCCGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KRALALPLSCAS*FLIWFMRLPWH Trigger: ATGCCACGGCAACCTCATGAACCAGATCAAGAATCAACTGGCACAGCTCAATGGCAGCGCCAATGCTCTCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS GCA 72 bp | GGAAATGAAGAGAGCATTGGCGCTGCCATTGAGCTGTaGCAGTTGATTCTTGATCTGGTTCATGAGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GNEESIGAAIEL*QLILDLVHEVA Trigger: GGCAACCTCATGAACCAGATCAAGAATCAACTGGCACAGCTCAATGGCAGCGCCAATGCTCTCTTCATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066283.12 |
||
| CDS CCA 72 bp | ACCACACTTATGACTTGCTTGTATGTCCCCAGAAGCTaGCAACCCAACTTTTTCCTTTGGAAGGCTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TTLMTCLYVPRS*QPNFFLWKASL Trigger: CAAAGAAGCCTTCCAAAGGAAAAAGTTGGGTTGCCAGCTTCTGGGGACATACAAGCAAGTCATAAGTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040750.4 ENSMUST00000066283.12 |
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