Pregenerated sensors for LIAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029199Ensembl transcript IDs: ENSMUST00000031101.10, ENSMUST00000122026.6, ENSMUST00000200374.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTCCGCTTCGATCAGCCATCAGACCCTTCAGAACGGTGCTGCCTTaGACTCACAGGAATCCTGACAGGGTGACACCATCCTCACACCAA | + |
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Preference number: 1 (lower is better) Translates to: IPLRSAIRPFRTVLP*THRNPDRVTPSSHQ Trigger: TTGGTGTGAGGATGGTGTCACCCTGTCAGGATTCCTGTGAGTGCAAGGCAGCACCGTTCTGAAGGGTCTGATGGCTGATCGAAGCGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| 3UTR GCA 90 bp | TTCCAGGACAGCCCTGACTACAGAACTGAGTTCTGTGATAACCTTTaGTACACTGTGAGACCCTGTCTCATAGCCCACACAACAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: FQDSPDYRTEFCDNL*YTVRPCLIAHTTDR Trigger: CCTGTCTGTTGTGTGGGCTATGAGACAGGGTCTCACAGTGTAGCAAAGGTTATCACAGAACTCAGTTCTGTAGTCAGGGCTGTCCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR CCA 90 bp | GAGACCCTGTCTCATAGCCCACACAACAGACAGGAAAATAAAGGCTaGGTTTGGTCTGGAGTTCAGGAGGAACATGAGGAACAGAAGATT | + |
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Preference number: 1 (lower is better) Translates to: ETLSHSPHNRQENKG*VWSGVQEEHEEQKI Trigger: AATCTTCTGTTCCTCATGTTCCTCCTGAACTCCAGACCAAACCCAGCCTTTATTTTCCTGTCTGTTGTGTGGGCTATGAGACAGGGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGGTTAGGGAGCCAGGGATGCGGCTTGCTTGGACCAGTGCTTCTGCCCTAGGAGGCAGAGTGGAGTaGCTTTCTCCCTGTAATGTG | + |
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Preference number: 2 (lower is better) Translates to: IKVREPGMRLAWTSASALGGRVE*LSPCNV Trigger: CACATTACAGGGAGAAAGCCACTCCACTCTGCCTCC...TAGGGCAGAAGCACTGGTCCAAGCAAGCCGCATCCCTGGCTCCCTAACCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR TCA 90 bp | CAATGGCAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGACAGGAATCCTGACAGGGTaGCACCATCCTCACACCAAC | + |
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Preference number: 2 (lower is better) Translates to: QWQQQAVPSCSVIKSSLTGILTG*HHPHTN Trigger: GTTGGTGTGAGGATGGTGTCACCCTGTCAGGATTCC...TGTCAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTGCCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| 3UTR-3UTR GCA 90 bp | GTGATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAGAACGGTGCTGCCTTaGACTCACAGGAATCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: VIKSSLTRMRTKASKKSMRTVLP*THRNPD Trigger: GTCAGGATTCCTGTGAGTGCAAGGCAGCACCGTTCT...CATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| 3UTR-3UTR TCA 90 bp | TACAGAACTGAGTTCTGTGATAACCTTTGCTACACTGTGAGACCCTGTCTCATAGGAATCCTGACAGGGTaGCACCATCCTCACACCAAC | + |
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Preference number: 2 (lower is better) Translates to: YRTEFCDNLCYTVRPCLIGILTG*HHPHTN Trigger: GTTGGTGTGAGGATGGTGTCACCCTGTCAGGATTCC...TATGAGACAGGGTCTCACAGTGTAGCAAAGGTTATCACAGAACTCAGTTCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCACACAGGTATGTTCTTTTTGTAAGGAACCCACTATAATTAAGAGTAGCGGAAGGAGCCAGCAGTaGCCCAGAGGCTTTACGACA | + |
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Preference number: 2 (lower is better) Translates to: LCTQVCSFCKEPTIIKSSGRSQQ*PRGFTT Trigger: TGTCGTAAAGCCTCTGGGCCACTGCTGGCTCCTTCC...GCTACTCTTAATTATAGTGGGTTCCTTACAAAAAGAACATACCTGTGTGCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR TCA 90 bp | AAAACAAGAGTAGGAAGGAGCCAGCAGTGGCCCAGAGGCTTTACGACATTTGTGCCAGCAAGAAGTCCATaGATTATCACTAAATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KTRVGRSQQWPRGFTTFVPARSP*IITKCV Trigger: CACACATTTAGTGATAATTCATGGACTTCTTGCTGG...CACAAATGTCGTAAAGCCTCTGGGCCACTGCTGGCTCCTTCCTACTCTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR CCA 90 bp | GATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAACATCCTCACACCAACTaGAAGCAAAATCGCAACACT | + |
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Preference number: 2 (lower is better) Translates to: DQVITDKDEDKGQQEVHEHPHTN*KQNRNT Trigger: AGTGTTGCGATTTTGCTTCCAGTTGGTGTGAGGATG...TTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| 3UTR-3UTR GCA 90 bp | GATAACGGATTCCATGTAAATCATAAATCAGTACTTAGGATAAAGGTTAGGGAGCTGAGTAGCCTGGGCTaGATGAGACCCTGTCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: DNGFHVNHKSVLRIKVRELSSLG*MRPCLN Trigger: GTTGAGACAGGGTCTCATGCAGCCCAGGCTACTCAG...CTCCCTAACCTTTATCCTAAGTACTGATTTATGATTTACATGGAATCCGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR TCA 90 bp | GATAACGGATTCCATGTAAATCATAAATCAGTACTTAGGATAAAGGTTAGGGAGTTTCTCCCTGTAATGTaGGGCAGAGCAGGCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: DNGFHVNHKSVLRIKVREFLPVM*GRAGRC Trigger: GCATCTGCCTGCTCTGCCTCACATTACAGGGAGAAA...CTCCCTAACCTTTATCCTAAGTACTGATTTATGATTTACATGGAATCCGTTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR GCA 90 bp | GATAACGGATTCCATGTAAATCATAAATCAGTACTTAGGATAAAGGTTAGGGAGAGAACGGTGCTGCCTTaGACTCACAGGAATCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: DNGFHVNHKSVLRIKVRERTVLP*THRNPD Trigger: GTCAGGATTCCTGTGAGTGCAAGGCAGCACCGTTCT...CTCCCTAACCTTTATCCTAAGTACTGATTTATGATTTACATGGAATCCGTTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCTAAATGTTCATAGACTTGAATTACAATGGCAACAGCAAGCCGTTCCAAGCCATCCTCACACCAACTaGAAGCAAAATCGCAACACT | + |
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Preference number: 2 (lower is better) Translates to: LLNVHRLELQWQQQAVPSHPHTN*KQNRNT Trigger: AGTGTTGCGATTTTGCTTCCAGTTGGTGTGAGGATG...GCTTGGAACGGCTTGCTGTTGCCATTGTAATTCAAGTCTATGAACATTTAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| 3UTR-3UTR CCA 90 bp | GATAACGGATTCCATGTAAATCATAAATCAGTACTTAGGATAAAGGTTAGGGAGGGACAGCAGAGTGCATaGGTATGTAATGACTACAAG | + |
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Preference number: 2 (lower is better) Translates to: DNGFHVNHKSVLRIKVREGQQSA*VCNDYK Trigger: CTTGTAGTCATTACATACCCATGCACTCTGCTGTCC...CTCCCTAACCTTTATCCTAAGTACTGATTTATGATTTACATGGAATCCGTTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR GCA 90 bp | TCTGACTCAGAATCCTGTCTTTGTTTACTCTGCGTCTTACAAAGGAAACTTTATTCATGTCTTATCCTGTaGACACAGGTATGTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SDSESCLCLLCVLQRKLYSCLIL*TQVCSF Trigger: AAAAGAACATACCTGTGTGCACAGGATAAGACATGA...ATAAAGTTTCCTTTGTAAGACGCAGAGTAAACAAAGACAGGATTCTGAGTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR CCA 72 bp | AGGATAAAGGTTAGGGAGCCAGGGATGCGGCTTGCTTaGACCAGTGCTTCTGCCCTACACGGGCACCCACAC | + |
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Preference number: 3 (lower is better) Translates to: RIKVREPGMRLA*TSASALHGHPH Trigger: GTGTGGGTGCCCGTGTAGGGCAGAAGCACTGGTCCAAGCAAGCCGCATCCCTGGCTCCCTAACCTTTATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR TCA 72 bp | CGGTGCTGCCTTGCACTCACAGGAATCCTGACAGGGTaGCACCATCCTCACACCAACTGGAAGCAAAATCGC | + |
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Preference number: 3 (lower is better) Translates to: RCCLALTGILTG*HHPHTNWKQNR Trigger: GCGATTTTGCTTCCAGTTGGTGTGAGGATGGTGTCACCCTGTCAGGATTCCTGTGAGTGCAAGGCAGCACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| 3UTR GCA 72 bp | TTAAAGGGCCTCAGCGTGAGAAAGGCTGAGAGCCACTaGTCTAGAGCATGGGTCACACAAAGGCCACACCCT | + |
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Preference number: 3 (lower is better) Translates to: LKGLSVRKAESH*SRAWVTQRPHP Trigger: AGGGTGTGGCCTTTGTGTGACCCATGCTCTAGAGCAGTGGCTCTCAGCCTTTCTCACGCTGAGGCCCTTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR TCA 72 bp | TACTGTGATCTTCTCCATTGCCTCCAAGTACTGGTGTaGGAGTGTACTCCTTGCCAGCTAGTGTTGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: YCDLLHCLQVLV*ECTPCQLVLQA Trigger: GGCCTGCAACACTAGCTGGCAAGGAGTACACTCTCACACCAGTACTTGGAGGCAATGGAGAAGATCACAGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR TCA 72 bp | CACATCCAGTTTGGAAGGACAGATAATAAAGGGCTTTaGCCCAGGCTGGCCTTCAACTCACTGCAATCTTCC | + |
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Preference number: 3 (lower is better) Translates to: HIQFGRTDNKGL*PRLAFNSLQSS Trigger: GGAAGATTGCAGTGAGTTGAAGGCCAGCCTGGGTCAAAGCCCTTTATTATCTGTCCTTCCAAACTGGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR TCA 72 bp | ACTTTGCTGCACAGTCTAGACTGGCCTGGAATACTGTaGTCTTCTCCATTGCCTCCAAGTACTGGTGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: TLLHSLDWPGIL*SSPLPPSTGVR Trigger: TCTCACACCAGTACTTGGAGGCAATGGAGAAGATCACAGTATTCCAGGCCAGTCTAGACTGTGCAGCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR GCA 72 bp | AGCCCTGACTACAGAACTGAGTTCTGTGATAACCTTTaGTACACTGTGAGACCCTGTCTCATAGCCCACACA | + |
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Preference number: 3 (lower is better) Translates to: SPDYRTEFCDNL*YTVRPCLIAHT Trigger: TGTGTGGGCTATGAGACAGGGTCTCACAGTGTAGCAAAGGTTATCACAGAACTCAGTTCTGTAGTCAGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR CCA 72 bp | TTGGAAGGACAGATAATAAAGGGCTTTGACCCAGGCTaGCCTTCAACTCACTGCAATCTTCCACACAACTGC | + |
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Preference number: 3 (lower is better) Translates to: LEGQIIKGFDPG*PSTHCNLPHNC Trigger: GCAGTTGTGTGGAAGATTGCAGTGAGTTGAAGGCCAGCCTGGGTCAAAGCCCTTTATTATCTGTCCTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR CCA 72 bp | ACTTTGGGTGACTTTGCTGCACAGTCTAGACTGGCCTaGAATACTGTGATCTTCTCCATTGCCTCCAAGTAC | + |
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Preference number: 3 (lower is better) Translates to: TLGDFAAQSRLA*NTVIFSIASKY Trigger: GTACTTGGAGGCAATGGAGAAGATCACAGTATTCCAGGCCAGTCTAGACTGTGCAGCAAAGTCACCCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR CCA 72 bp | AGCCCACACAACAGACAGGAAAATAAAGGCTGGGTTTaGTCTGGAGTTCAGGAGGAACATGAGGAACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: SPHNRQENKGWV*SGVQEEHEEQK Trigger: CTTCTGTTCCTCATGTTCCTCCTGAACTCCAGACCAAACCCAGCCTTTATTTTCCTGTCTGTTGTGTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR TCA 72 bp | TGGCCTTCAACTCACTGCAATCTTCCACACAACTGCTaGGGTTCAAAGTGTGTACCATCATGTCTTATCCTG | + |
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Preference number: 3 (lower is better) Translates to: WPSTHCNLPHNC*GSKCVPSCLIL Trigger: CAGGATAAGACATGATGGTACACACTTTGAACCTCAGCAGTTGTGTGGAAGATTGCAGTGAGTTGAAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR-3UTR CAA 90 bp | TCTGACTCAGAATCCTGTCTTTGTTTACTCTGCGTCTTACAAAGGAAACTTTATAGCAACAAAGCTAATTaGATGGCTGGGGTCACCATA | + |
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Preference number: 3 (lower is better) Translates to: SDSESCLCLLCVLQRKLYSNKAN*MAGVTI Trigger: TATGGTGACCCCAGCCATCAAATTAGCTTTGTTGCT...ATAAAGTTTCCTTTGTAAGACGCAGAGTAAACAAAGACAGGATTCTGAGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR GCA 72 bp | TTATCTTCTGACTCAGAATCCTGTCTTTGTTTACTCTaGGTCTTACAAAGGAAACTTTATGTGGCTATATTG | + |
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Preference number: 3 (lower is better) Translates to: LSSDSESCLCLL*VLQRKLYVAIL Trigger: CAATATAGCCACATAAAGTTTCCTTTGTAAGACGCAGAGTAAACAAAGACAGGATTCTGAGTCAGAAGATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| 3UTR CCA 72 bp | TTTGTTTACTCTGCGTCTTACAAAGGAAACTTTATGTaGCTATATTGTAAAGTAGGTAGTGTGGATAACGGA | + |
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Preference number: 3 (lower is better) Translates to: FVYSASYKGNFM*LYCKVGSVDNG Trigger: TCCGTTATCCACACTACCTACTTTACAATATAGCCACATAAAGTTTCCTTTGTAAGACGCAGAGTAAACAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR GCA 90 bp | GTGATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGACGGTCTTGGCGATGTaGTCAGCTCCCCCGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VIKSSLTRMRTKASKKSMTVLAM*SAPPSA Trigger: GGCCGACGGGGGAGCTGAGCACATCGCCAAGACCGT...CATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | AGAACGGTGCTGCCTTGCACTCACAGGAATCCTGACAGGGTGACACCATCCTCAAACACTCTCCAATGTTaGGGCACCGGGCTTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RTVLPCTHRNPDRVTPSSNTLQC*GTGLPH Trigger: GTGAGGAAGCCCGGTGCCCCAACATTGGAGAGTGTT...TGAGGATGGTGTCACCCTGTCAGGATTCCTGTGAGTGCAAGGCAGCACCGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR GCA 90 bp | ATTCCGCTTCGATCAGCCATCAGACCCTTCAGAACGGTGCTGCCTTGCACTCACAGCCACCTTCTCCACTaGTCTCAGATCACCTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: IPLRSAIRPFRTVLPCTHSHLLH*SQITSE Trigger: TTCCGAGGTGATCTGAGAGCAGTGGAGAAGGTGGCT...GTGAGTGCAAGGCAGCACCGTTCTGAAGGGTCTGATGGCTGATCGAAGCGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTTAGGGAGCCAGGGATGCGGCTTGCTTGGACCAGTGCTTCTGCCCTATATTGTCGGGCTCATTaGCATCCAATGGAGGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: IKVREPGMRLAWTSASALYCRAH*HPMEGD Trigger: ATCCCCCTCCATTGGATGCCAATGAGCCCGACAATA...TAGGGCAGAAGCACTGGTCCAAGCAAGCCGCATCCCTGGCTCCCTAACCTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR CCA 90 bp | TATACACCATTCCGCTTCGATCAGCCATCAGACCCTTCAGAACGGTGCTGCCTTATCACCTCGGAAGTCTaGGGTGAGGCATTCCACGAG | + |
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Preference number: 4 (lower is better) Translates to: YTPFRFDQPSDPSERCCLITSEV*GEAFHE Trigger: CTCGTGGAATGCCTCACCCCAGACTTCCGAGGTGAT...AAGGCAGCACCGTTCTGAAGGGTCTGATGGCTGATCGAAGCGGAATGGTGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTTAGGGAGCCAGGGATGCGGCTTGCTTGGACCAGTGCTTCTGCCCTAGAGACTGGTCAAAATTaGCCCGGGGATCACGAACTT | + |
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Preference number: 4 (lower is better) Translates to: IKVREPGMRLAWTSASALETGQN*PGDHEL Trigger: AAGTTCGTGATCCCCGGGCCAATTTTGACCAGTCTC...TAGGGCAGAAGCACTGGTCCAAGCAAGCCGCATCCCTGGCTCCCTAACCTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR CCA 90 bp | AGAACGGTGCTGCCTTGCACTCACAGGAATCCTGACAGGGTGACACCATCCTCAGAGACTGGTCAAAATTaGCCCGGGGATCACGAACTT | + |
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Preference number: 4 (lower is better) Translates to: RTVLPCTHRNPDRVTPSSETGQN*PGDHEL Trigger: AAGTTCGTGATCCCCGGGCCAATTTTGACCAGTCTC...TGAGGATGGTGTCACCCTGTCAGGATTCCTGTGAGTGCAAGGCAGCACCGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTTAGGGAGCCAGGGATGCGGCTTGCTTGGACCAGTGCTTCTGCCCTAGAAACAACATCAGGCTaGACCTCCTTGGCATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: IKVREPGMRLAWTSASALETTSG*TSLACL Trigger: GAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTC...TAGGGCAGAAGCACTGGTCCAAGCAAGCCGCATCCCTGGCTCCCTAACCTTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR CCA 90 bp | AGAACGGTGCTGCCTTGCACTCACAGGAATCCTGACAGGGTGACACCATCCTCATCTTCAACCTTAAGGTaGCGCTTCGTTGGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: RTVLPCTHRNPDRVTPSSSSTLR*RFVGCM Trigger: CATGCAGCCAACGAAGCGCCACCTTAAGGTTGAAGA...TGAGGATGGTGTCACCCTGTCAGGATTCCTGTGAGTGCAAGGCAGCACCGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | AGGAGCCAGCAGTGGCCCAGAGGCTTTACGACATTTGTGGACAGCAGAGTGCATACTCTGCAATTGCTTTaGCCGTATTGTCGGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RSQQWPRGFTTFVDSRVHTLQLL*PYCRAH Trigger: ATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGT...ATGCACTCTGCTGTCCACAAATGTCGTAAAGCCTCTGGGCCACTGCTGGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR GCA 90 bp | AAAACAAGAGTAGGAAGGAGCCAGCAGTGGCCCAGAGGCTTTACGACATTTGTGAGCCACCTTCTCCACTaGTCTCAGATCACCTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: KTRVGRSQQWPRGFTTFVSHLLH*SQITSE Trigger: TTCCGAGGTGATCTGAGAGCAGTGGAGAAGGTGGCT...CACAAATGTCGTAAAGCCTCTGGGCCACTGCTGGCTCCTTCCTACTCTTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR CCA 90 bp | CAATGGCAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGACAAACACTCTCCAATGTTaGGGCACCGGGCTTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: QWQQQAVPSCSVIKSSLTNTLQC*GTGLPH Trigger: GTGAGGAAGCCCGGTGCCCCAACATTGGAGAGTGTT...TGTCAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTGCCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| 3UTR CAA 72 bp | ACAGAAGATTGCTTGAGGCAGGTAAGGAAGGTGACTTaGGGTGACTTTGCTGCACAGTCTAGACTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TEDCLRQVRKVT*GDFAAQSRLAW Trigger: CCAGGCCAGTCTAGACTGTGCAGCAAAGTCACCCAAAGTCACCTTCCTTACCTGCCTCAAGCAATCTTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR TCA 90 bp | ATTCCGCTTCGATCAGCCATCAGACCCTTCAGAACGGTGCTGCCTTGCACTCACCCAGATACAAAATCTTaGAGGTCTGGTCCATTATGC | + |
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Preference number: 4 (lower is better) Translates to: IPLRSAIRPFRTVLPCTHPDTKS*RSGPLC Trigger: GCATAATGGACCAGACCTTCAAGATTTTGTATCTGG...GTGAGTGCAAGGCAGCACCGTTCTGAAGGGTCTGATGGCTGATCGAAGCGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122026.6 |
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| CDS-3UTR GCA 90 bp | TATACACCATTCCGCTTCGATCAGCCATCAGACCCTTCAGAACGGTGCTGCCTTATCCAGACCCCACTCTaGAATTGCTTTGGCCGTATT | + |
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Preference number: 4 (lower is better) Translates to: YTPFRFDQPSDPSERCCLIQTPL*NCFGRI Trigger: AATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGAT...AAGGCAGCACCGTTCTGAAGGGTCTGATGGCTGATCGAAGCGGAATGGTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | TTGGGTGACTTTGCTGCACAGTCTAGACTGGCCTGGAATACTGTGATCTTCTCCCTCATTGGCATCCAATaGAGGGGGATTTCTTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LGDFAAQSRLAWNTVIFSLIGIQ*RGISCG Trigger: ACCGCAAGAAATCCCCCTCCATTGGATGCCAATGAG...GGAGAAGATCACAGTATTCCAGGCCAGTCTAGACTGTGCAGCAAAGTCACCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR CCA 90 bp | GATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAAATCACCTCGGAAGTCTaGGGTGAGGCATTCCACGAG | + |
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Preference number: 4 (lower is better) Translates to: DQVITDKDEDKGQQEVHEITSEV*GEAFHE Trigger: CTCGTGGAATGCCTCACCCCAGACTTCCGAGGTGAT...TTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | TTGGGTGACTTTGCTGCACAGTCTAGACTGGCCTGGAATACTGTGATCTTCTCCAGTACACGAAGAGACTaGTCAAAATTGGCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGDFAAQSRLAWNTVIFSSTRRD*SKLARG Trigger: TCCCCGGGCCAATTTTGACCAGTCTCTTCGTGTACT...GGAGAAGATCACAGTATTCCAGGCCAGTCTAGACTGTGCAGCAAAGTCACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR GCA 90 bp | TGCCAGGAGTTCCAGGACAGCCCTGACTACAGAACTGAGTTCTGTGATAACCTTATCTGCAACCTCTTGTaGATGTGTCCCCCATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CQEFQDSPDYRTEFCDNLICNLL*MCPPST Trigger: TGTTGATGGGGGACACATGCACAAGAGGTTGCAGAT...AAGGTTATCACAGAACTCAGTTCTGTAGTCAGGGCTGTCCTGGAACTCCTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR GCA 90 bp | CCTCACACCAACTGGAAGCAAAATCGCAACACTCCTGTGATCTTGAAGGGCTTGATCCAGACCCCACTCTaGAATTGCTTTGGCCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: PHTNWKQNRNTPVILKGLIQTPL*NCFGRI Trigger: AATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGAT...CAAGCCCTTCAAGATCACAGGAGTGTTGCGATTTTGCTTCCAGTTGGTGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | CAATGGCAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGACATATTGTCGGGCTCATTaGCATCCAATGGAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QWQQQAVPSCSVIKSSLTYCRAH*HPMEGD Trigger: ATCCCCCTCCATTGGATGCCAATGAGCCCGACAATA...TGTCAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTGCCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | CAATGGCAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGACATCTTCAACCTTAAGGTaGCGCTTCGTTGGCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QWQQQAVPSCSVIKSSLTSSTLR*RFVGCM Trigger: CATGCAGCCAACGAAGCGCCACCTTAAGGTTGAAGA...TGTCAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTGCCATTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR TCA 90 bp | CCTCACACCAACTGGAAGCAAAATCGCAACACTCCTGTGATCTTGAAGGGCTTGTTCACCTGCTTTATATaGAGATCGCACCAAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PHTNWKQNRNTPVILKGLFTCFI*RSHQRT Trigger: GGTCCTTTGGTGCGATCTTCATATAAAGCAGGTGAA...CAAGCCCTTCAAGATCACAGGAGTGTTGCGATTTTGCTTCCAGTTGGTGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | GTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAATTATCACAGGCTGGACCTCCTTaGCATGTCTCAGTACACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VITDKDEDKGQQEVHELSQAGPP*HVSVHE Trigger: TTCGTGTACTGAGACATGCCAAGGAGGTCCAGCCTG...TGATAATTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR GCA 90 bp | GATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAAATCTGCAACCTCTTGTaGATGTGTCCCCCATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DQVITDKDEDKGQQEVHEICNLL*MCPPST Trigger: TGTTGATGGGGGACACATGCACAAGAGGTTGCAGAT...TTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | GATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAAACTCTGCAATTGCTTTaGCCGTATTGTCGGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DQVITDKDEDKGQQEVHETLQLL*PYCRAH Trigger: ATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGT...TTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | GTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAATTATCAAGTACACGAAGAGACTaGTCAAAATTGGCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VITDKDEDKGQQEVHELSSTRRD*SKLARG Trigger: TCCCCGGGCCAATTTTGACCAGTCTCTTCGTGTACT...TGATAATTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | GTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAATTATCAGAAACAACATCAGGCTaGACCTCCTTGGCATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VITDKDEDKGQQEVHELSETTSG*TSLACL Trigger: GAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTC...TGATAATTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR TCA 90 bp | CATGGGTATGTAATGACTACAAGAGGAAGTGTCCATAAGGACCACAAAGGCTCGTTCACCTGCTTTATATaGAGATCGCACCAAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HGYVMTTRGSVHKDHKGSFTCFI*RSHQRT Trigger: GGTCCTTTGGTGCGATCTTCATATAAAGCAGGTGAA...CGAGCCTTTGTGGTCCTTATGGACACTTCCTCTTGTAGTCATTACATACCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR CCA 90 bp | CTTCTAAATGTTCATAGACTTGAATTACAATGGCAACAGCAAGCCGTTCCAAGCCAGGCTGGACCTCCTTaGCATGTCTCAGTACACGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLNVHRLELQWQQQAVPSQAGPP*HVSVHE Trigger: TTCGTGTACTGAGACATGCCAAGGAGGTCCAGCCTG...GCTTGGAACGGCTTGCTGTTGCCATTGTAATTCAAGTCTATGAACATTTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | GATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAATCCTCACACACTGTGTaGAGACTTAAATTCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DQVITDKDEDKGQQEVHESSHTV*RLKFRN Trigger: ATTGCGGAATTTAAGTCTCCACACAGTGTGTGAGGA...TTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | GATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAATTCCACGAGGATTTTTaGATTCCTTTCCTTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQVITDKDEDKGQQEVHEFHEDF*IPFLQA Trigger: TGCTTGAAGGAAAGGAATCCAAAAATCCTCGTGGAA...TTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR GCA 90 bp | GTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAATTATCACCATGTACTCTTGTCTaGAAGATCACCAGATACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VITDKDEDKGQQEVHELSPCTLV*KITRYK Trigger: TTTGTATCTGGTGATCTTGCAGACAAGAGTACATGG...TGATAATTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | CTTCTAAATGTTCATAGACTTGAATTACAATGGCAACAGCAAGCCGTTCCAAGCTCCTCACACACTGTGTaGAGACTTAAATTCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNVHRLELQWQQQAVPSSSHTV*RLKFRN Trigger: ATTGCGGAATTTAAGTCTCCACACAGTGTGTGAGGA...GCTTGGAACGGCTTGCTGTTGCCATTGTAATTCAAGTCTATGAACATTTAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CCA 90 bp | CTTCTAAATGTTCATAGACTTGAATTACAATGGCAACAGCAAGCCGTTCCAAGCTTCCACGAGGATTTTTaGATTCCTTTCCTTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNVHRLELQWQQQAVPSFHEDF*IPFLQA Trigger: TGCTTGAAGGAAAGGAATCCAAAAATCCTCGTGGAA...GCTTGGAACGGCTTGCTGTTGCCATTGTAATTCAAGTCTATGAACATTTAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | AGAACGGTGCTGCCTTGCACTCACAGGAATCCTGACAGGGTGACACCATCCTCACAACACTCTCCAATGTaGGGGCACCGGGCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTVLPCTHRNPDRVTPSSQHSPM*GHRASS Trigger: TGAGGAAGCCCGGTGCCCCAACATTGGAGAGTGTTG...TGAGGATGGTGTCACCCTGTCAGGATTCCTGTGAGTGCAAGGCAGCACCGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 90 bp | CTGTGGCTGTGGCATATTCCCCACCTCCCCAACACTCTCCAATGTTaGGGCACCGGGCTTCCTCACACACTGTGTGGAGACTTAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWLWHIPHLPNTLQC*GTGLPHTLCGDLNS Trigger: GGAATTTAAGTCTCCACACAGTGTGTGAGGAAGCCCGGTGCCCCAACATTGGAGAGTGTTGGGGAGGTGGGGAATATGCCACAGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 ENSMUST00000200374.2 |
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| CDS GCA 90 bp | ATCCACCGACGTCAGGACAACATAATCCAGACCCCACTCTGCAATTaGTTTGGCCGTATTGTCGGGCTCATTGGCATCCAATGGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IHRRQDNIIQTPLCN*FGRIVGLIGIQWRG Trigger: CCCCCTCCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGATTATGTTGTCCTGACGTCGGTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | AGGAAGGAGCCAGCAGTGGCCCAGAGGCTTTACGACATTTGTGGACAGCAGAGTCACTCTGCAATTGCTTaGGCCGTATTGTCGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKEPAVAQRLYDICGQQSHSAIA*AVLSGS Trigger: TGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTG...ACTCTGCTGTCCACAAATGTCGTAAAGCCTCTGGGCCACTGCTGGCTCCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS CCA 90 bp | CCGACGTCAGGACAACATAATCCAGACCCCACTCTGCAATTGCTTTaGCCGTATTGTCGGGCTCATTGGCATCCAATGGAGGGGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTSGQHNPDPTLQLL*PYCRAHWHPMEGDF Trigger: GAAATCCCCCTCCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGATTATGTTGTCCTGACGTCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | AAAACAAGAGTAGGAAGGAGCCAGCAGTGGCCCAGAGGCTTTACGACATTTGTGCAACACTCTCCAATGTaGGGGCACCGGGCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTRVGRSQQWPRGFTTFVQHSPM*GHRASS Trigger: TGAGGAAGCCCGGTGCCCCAACATTGGAGAGTGTTG...CACAAATGTCGTAAAGCCTCTGGGCCACTGCTGGCTCCTTCCTACTCTTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS TCA 90 bp | GAGCCACCTTCTCCACTGCTCTCAGATCACCTCGGAAGTCTGGGGTaGGGCATTCCACGAGGATTTTTGGATTCCTTTCCTTCAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: EPPSPLLSDHLGSLG*GIPRGFLDSFPSSM Trigger: CATGCTTGAAGGAAAGGAATCCAAAAATCCTCGTGGAATGCCTCACCCCAGACTTCCGAGGTGATCTGAGAGCAGTGGAGAAGGTGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 90 bp | ATCTCGATCCACCGACGTCAGGACAACATAATCCAGACCCCACTCTaGAATTGCTTTGGCCGTATTGTCGGGCTCATTGGCATCCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: ISIHRRQDNIIQTPL*NCFGRIVGLIGIQW Trigger: CCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGATTATGTTGTCCTGACGTCGGTGGATCGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 90 bp | ACATATTCTTCAACCTTAAGGTGGCGCTTCGTTGGCTGCATGTACTaGCCTAGAGTTAAACAGTCCACGTCGGCCGCACGGAGAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TYSSTLRWRFVGCMY*PRVKQSTSAARRAF Trigger: GAAAGCTCTCCGTGCGGCCGACGTGGACTGTTTAACTCTAGGGCAGTACATGCAGCCAACGAAGCGCCACCTTAAGGTTGAAGAATATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 90 bp | TCAGGAGTAACATATTCTTCAACCTTAAGGTGGCGCTTCGTTGGCTaGATGTACTGCCCTAGAGTTAAACAGTCCACGTCGGCCGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: SGVTYSSTLRWRFVG*MYCPRVKQSTSAAR Trigger: CCGTGCGGCCGACGTGGACTGTTTAACTCTAGGGCAGTACATGCAGCCAACGAAGCGCCACCTTAAGGTTGAAGAATATGTTACTCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 90 bp | GGCCGTATTGTCGGGCTCATTGGCATCCAATGGAGGGGGATTTCTTaGGGTCTTAACGGAACAAAATCTGCAACCTCTTGTGCATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GRIVGLIGIQWRGIS*GLNGTKSATSCACV Trigger: GACACATGCACAAGAGGTTGCAGATTTTGTTCCGTTAAGACCGCAAGAAATCCCCCTCCATTGGATGCCAATGAGCCCGACAATACGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 90 bp | AGACAGAGCCACCTTCTCCACTGCTCTCAGATCACCTCGGAAGTCTaGGGTGAGGCATTCCACGAGGATTTTTGGATTCCTTTCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RQSHLLHCSQITSEV*GEAFHEDFWIPFLQ Trigger: TTGAAGGAAAGGAATCCAAAAATCCTCGTGGAATGCCTCACCCCAGACTTCCGAGGTGATCTGAGAGCAGTGGAGAAGGTGGCTCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 90 bp | CTCTGCAATTGCTTTGGCCGTATTGTCGGGCTCATTGGCATCCAATaGAGGGGGATTTCTTGCGGTCTTAACGGAACAAAATCTGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LCNCFGRIVGLIGIQ*RGISCGLNGTKSAT Trigger: GGTTGCAGATTTTGTTCCGTTAAGACCGCAAGAAATCCCCCTCCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 90 bp | CCAGCATTATCGATGTTTTGGAAACAACATCAGGCTGGACCTCCTTaGCATGTCTCAGTACACGAAGAGACTGGTCAAAATTGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PALSMFWKQHQAGPP*HVSVHEETGQNWPG Trigger: CCCGGGCCAATTTTGACCAGTCTCTTCGTGTACTGAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTCCAAAACATCGATAATGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 90 bp | AGACTTGCTCGTCTGTCTCACCAAGGCCCAGCATTATCGATGTTTTaGAAACAACATCAGGCTGGACCTCCTTGGCATGTCTCAGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: RLARLSHQGPALSMF*KQHQAGPPWHVSVH Trigger: GTGTACTGAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTCCAAAACATCGATAATGCTGGGCCTTGGTGAGACAGACGAGCAAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | AGGAGCCAGCAGTGGCCCAGAGGCTTTACGACATTTGTGGACAGCAGAGTGCATAGCATTATCGATGTTTaGGAAACAACATCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSQQWPRGFTTFVDSRVHSIIDV*ETTSGW Trigger: CCAGCCTGATGTTGTTTCCAAAACATCGATAATGCT...ATGCACTCTGCTGTCCACAAATGTCGTAAAGCCTCTGGGCCACTGCTGGCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS-3UTR CAA 90 bp | TATACACCATTCCGCTTCGATCAGCCATCAGACCCTTCAGAACGGTGCTGCCTTGGGACAGTCTCCACATaGTGTGCATACACATCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: YTPFRFDQPSDPSERCCLGTVST*CAYTSN Trigger: ATTAGATGTGTATGCACACAATGTGGAGACTGTCCC...AAGGCAGCACCGTTCTGAAGGGTCTGATGGCTGATCGAAGCGGAATGGTGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 90 bp | TCACCAAGGCCCAGCATTATCGATGTTTTGGAAACAACATCAGGCTaGACCTCCTTGGCATGTCTCAGTACACGAAGAGACTGGTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPRPSIIDVLETTSG*TSLACLSTRRDWSK Trigger: TTTTGACCAGTCTCTTCGTGTACTGAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTCCAAAACATCGATAATGCTGGGCCTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | GTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAATTATCAAGAGACTGGTCAAAATaGGCCCGGGGATCACGAACT | + |
|
Preference number: 5 (lower is better) Translates to: VITDKDEDKGQQEVHELSRDWSK*ARGSRT Trigger: AGTTCGTGATCCCCGGGCCAATTTTGACCAGTCTCT...TGATAATTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | CAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGACAAGGATGGCACCAAAGGACCACTaGCCGTATAGAGAAATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QQQAVPSCSVIKSSLTRMAPKDH*PYREIQ Trigger: TTGGATTTCTCTATACGGCAAGTGGTCCTTTGGTGC...CATCCTTGTCAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
||
| CDS-3UTR CAA 90 bp | GATCAAGTCATCACTGACAAGGATGAGGACAAAGGCCAGCAAGAAGTCCATGAAAAAATCTGCAACCTCTaGTGCATGTGTCCCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: DQVITDKDEDKGQQEVHEKICNL*CMCPPS Trigger: TGATGGGGGACACATGCACAAGAGGTTGCAGATTTT...TTCATGGACTTCTTGCTGGCCTTTGTCCTCATCCTTGTCAGTGATGACTTGATC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
||
| CDS-3UTR CAA 90 bp | TTACAATGGCAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGAAAATCTGCAACCTCTaGTGCATGTGTCCCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LQWQQQAVPSCSVIKSSLKICNL*CMCPPS Trigger: TGATGGGGGACACATGCACAAGAGGTTGCAGATTTT...CAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTGCCATTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
||
| CDS-3UTR CAA 90 bp | CAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGACAAGGATGGGGACAGTCTCCACATaGTGTGCATACACATCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QQQAVPSCSVIKSSLTRMGTVST*CAYTSN Trigger: ATTAGATGTGTATGCACACAATGTGGAGACTGTCCC...CATCCTTGTCAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
||
| CDS-3UTR CAA 90 bp | TTACAATGGCAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGGCACCAAAGGACCACTaGCCGTATAGAGAAATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LQWQQQAVPSCSVIKSSLAPKDH*PYREIQ Trigger: TTGGATTTCTCTATACGGCAAGTGGTCCTTTGGTGC...CAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTGCCATTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
||
| CDS-3UTR CAA 90 bp | CAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGACAAGGATGAGCATTATCGATGTTTaGGAAACAACATCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QQQAVPSCSVIKSSLTRMSIIDV*ETTSGW Trigger: CCAGCCTGATGTTGTTTCCAAAACATCGATAATGCT...CATCCTTGTCAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | TTACAATGGCAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGTCATCCCATGTACTCTaGTCTGCAAGATCACCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LQWQQQAVPSCSVIKSSLSSHVL*SARSPD Trigger: ATCTGGTGATCTTGCAGACAAGAGTACATGGGATGA...CAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTGCCATTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | TTACAATGGCAACAGCAAGCCGTTCCAAGCTGTTCTGTGATCAAGTCATCACTGTACCCATGGGTATCTTaGTCTTTAGCCATGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: LQWQQQAVPSCSVIKSSLYPWVS*SLAMEV Trigger: TACCTCCATGGCTAAAGACAAAGATACCCATGGGTA...CAGTGATGACTTGATCACAGAACAGCTTGGAACGGCTTGCTGTTGCCATTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122026.6 |
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| CDS-3UTR CAA 90 bp | TCTGACTCAGAATCCTGTCTTTGTTTACTCTGCGTCTTACAAAGGAAACTTTATAGAGACTGGTCAAAATaGGCCCGGGGATCACGAACT | + |
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Preference number: 5 (lower is better) Translates to: SDSESCLCLLCVLQRKLYRDWSK*ARGSRT Trigger: AGTTCGTGATCCCCGGGCCAATTTTGACCAGTCTCT...ATAAAGTTTCCTTTGTAAGACGCAGAGTAAACAAAGACAGGATTCTGAGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031101.10 |
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| CDS GCA 72 bp | TTCCTTTCCTTCAAGCATGACACGGTCTTGGCGATGTaGTCAGCTCCCCCGTCGGCCACATCATCTCGATCC | + |
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Preference number: 6 (lower is better) Translates to: FLSFKHDTVLAM*SAPPSATSSRS Trigger: GGATCGAGATGATGTGGCCGACGGGGGAGCTGAGCACATCGCCAAGACCGTGTCATGCTTGAAGGAAAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 72 bp | TCAACCTTAAGGTGGCGCTTCGTTGGCTGCATGTACTaGCCTAGAGTTAAACAGTCCACGTCGGCCGCACGG | + |
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Preference number: 6 (lower is better) Translates to: STLRWRFVGCMY*PRVKQSTSAAR Trigger: CCGTGCGGCCGACGTGGACTGTTTAACTCTAGGGCAGTACATGCAGCCAACGAAGCGCCACCTTAAGGTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 90 bp | GATCCACCGACGTCAGGACAACATAATCCAGACCCCACTCTGCAATaGCTTTGGCCGTATTGTCGGGCTCATTGGCATCCAATGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: DPPTSGQHNPDPTLQ*LWPYCRAHWHPMEG Trigger: CCCCTCCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGATTATGTTGTCCTGACGTCGGTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 72 bp | CACCGACGTCAGGACAACATAATCCAGACCCCACTCTaGAATTGCTTTGGCCGTATTGTCGGGCTCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: HRRQDNIIQTPL*NCFGRIVGLIG Trigger: GCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGATTATGTTGTCCTGACGTCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS TCA 72 bp | TTCCACGAGGATTTTTGGATTCCTTTCCTTCAAGCATaGCACGGTCTTGGCGATGTGCTCAGCTCCCCCGTC | + |
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Preference number: 6 (lower is better) Translates to: FHEDFWIPFLQA*HGLGDVLSSPV Trigger: GACGGGGGAGCTGAGCACATCGCCAAGACCGTGTCATGCTTGAAGGAAAGGAATCCAAAAATCCTCGTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 72 bp | CACCTTCTCCACTGCTCTCAGATCACCTCGGAAGTCTaGGGTGAGGCATTCCACGAGGATTTTTGGATTCCT | + |
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Preference number: 6 (lower is better) Translates to: HLLHCSQITSEV*GEAFHEDFWIP Trigger: AGGAATCCAAAAATCCTCGTGGAATGCCTCACCCCAGACTTCCGAGGTGATCTGAGAGCAGTGGAGAAGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 90 bp | TCCAGACCCCACTCTGCAATTGCTTTGGCCGTATTGTCGGGCTCATaGGCATCCAATGGAGGGGGATTTCTTGCGGTCTTAACGGAACAA | + |
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Preference number: 6 (lower is better) Translates to: SRPHSAIALAVLSGS*ASNGGGFLAVLTEQ Trigger: TTGTTCCGTTAAGACCGCAAGAAATCCCCCTCCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 90 bp | CGGGGATCACGAACTTTCCTCTGTAACTCGGGGACAGTCTCCACATaGTGTGCATACACATCTAATCCAGACAGAGCCACCTTCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: RGSRTFLCNSGTVST*CAYTSNPDRATFST Trigger: AGTGGAGAAGGTGGCTCTGTCTGGATTAGATGTGTATGCACACAATGTGGAGACTGTCCCCGAGTTACAGAGGAAAGTTCGTGATCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS TCA 72 bp | TCTCCACTGCTCTCAGATCACCTCGGAAGTCTGGGGTaGGGCATTCCACGAGGATTTTTGGATTCCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SPLLSDHLGSLG*GIPRGFLDSFP Trigger: AGGAAAGGAATCCAAAAATCCTCGTGGAATGCCTCACCCCAGACTTCCGAGGTGATCTGAGAGCAGTGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 72 bp | CGTCAGGACAACATAATCCAGACCCCACTCTGCAATTaGTTTGGCCGTATTGTCGGGCTCATTGGCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: RQDNIIQTPLCN*FGRIVGLIGIQ Trigger: TTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGATTATGTTGTCCTGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 72 bp | GGACAACATAATCCAGACCCCACTCTGCAATTGCTTTaGCCGTATTGTCGGGCTCATTGGCATCCAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: GQHNPDPTLQLL*PYCRAHWHPME Trigger: CTCCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGATTATGTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 72 bp | TGGCATGTCTCAGTACACGAAGAGACTGGTCAAAATTaGCCCGGGGATCACGAACTTTCCTCTGTAACTCGG | + |
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Preference number: 6 (lower is better) Translates to: WHVSVHEETGQN*PGDHELSSVTR Trigger: CCGAGTTACAGAGGAAAGTTCGTGATCCCCGGGCCAATTTTGACCAGTCTCTTCGTGTACTGAGACATGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 72 bp | CACTCTGCAATTGCTTTGGCCGTATTGTCGGGCTCATaGGCATCCAATGGAGGGGGATTTCTTGCGGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: HSAIALAVLSGS*ASNGGGFLAVL Trigger: TAAGACCGCAAGAAATCCCCCTCCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 72 bp | ACGTCAGGACAACATAATCCAGACCCCACTCTGCAATaGCTTTGGCCGTATTGTCGGGCTCATTGGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: TSGQHNPDPTLQ*LWPYCRAHWHP Trigger: TGGATGCCAATGAGCCCGACAATACGGCCAAAGCAATTGCAGAGTGGGGTCTGGATTATGTTGTCCTGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 90 bp | CCCAGCATTATCGATGTTTTGGAAACAACATCAGGCTGGACCTCCTaGGCATGTCTCAGTACACGAAGAGACTGGTCAAAATTGGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PSIIDVLETTSGWTS*ACLSTRRDWSKLAR Trigger: CCGGGCCAATTTTGACCAGTCTCTTCGTGTACTGAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTCCAAAACATCGATAATGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 72 bp | GTCGGGCTCATTGGCATCCAATGGAGGGGGATTTCTTaGGGTCTTAACGGAACAAAATCTGCAACCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VGLIGIQWRGIS*GLNGTKSATSC Trigger: ACAAGAGGTTGCAGATTTTGTTCCGTTAAGACCGCAAGAAATCCCCCTCCATTGGATGCCAATGAGCCCGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 72 bp | TGCTTTGGCCGTATTGTCGGGCTCATTGGCATCCAATaGAGGGGGATTTCTTGCGGTCTTAACGGAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: CFGRIVGLIGIQ*RGISCGLNGTK Trigger: TTTTGTTCCGTTAAGACCGCAAGAAATCCCCCTCCATTGGATGCCAATGAGCCCGACAATACGGCCAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 72 bp | TTGGCATGTCTCAGTACACGAAGAGACTGGTCAAAATaGGCCCGGGGATCACGAACTTTCCTCTGTAACTCG | + |
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Preference number: 6 (lower is better) Translates to: LACLSTRRDWSK*ARGSRTFLCNS Trigger: CGAGTTACAGAGGAAAGTTCGTGATCCCCGGGCCAATTTTGACCAGTCTCTTCGTGTACTGAGACATGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 72 bp | TCGTCTGTCTCACCAAGGCCCAGCATTATCGATGTTTaGGAAACAACATCAGGCTGGACCTCCTTGGCATGT | + |
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Preference number: 6 (lower is better) Translates to: SSVSPRPSIIDV*ETTSGWTSLAC Trigger: ACATGCCAAGGAGGTCCAGCCTGATGTTGTTTCCAAAACATCGATAATGCTGGGCCTTGGTGAGACAGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS GCA 72 bp | ACATATTCTTCAACCTTAAGGTGGCGCTTCGTTGGCTaGATGTACTGCCCTAGAGTTAAACAGTCCACGTCG | + |
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Preference number: 6 (lower is better) Translates to: TYSSTLRWRFVG*MYCPRVKQSTS Trigger: CGACGTGGACTGTTTAACTCTAGGGCAGTACATGCAGCCAACGAAGCGCCACCTTAAGGTTGAAGAATATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 72 bp | CCCAGCATTATCGATGTTTTGGAAACAACATCAGGCTaGACCTCCTTGGCATGTCTCAGTACACGAAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: PSIIDVLETTSG*TSLACLSTRRD Trigger: GTCTCTTCGTGTACTGAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTCCAAAACATCGATAATGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CCA 72 bp | TCGATGTTTTGGAAACAACATCAGGCTGGACCTCCTTaGCATGTCTCAGTACACGAAGAGACTGGTCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SMFWKQHQAGPP*HVSVHEETGQN Trigger: ATTTTGACCAGTCTCTTCGTGTACTGAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTCCAAAACATCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 72 bp | ATCGATGTTTTGGAAACAACATCAGGCTGGACCTCCTaGGCATGTCTCAGTACACGAAGAGACTGGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: IDVLETTSGWTS*ACLSTRRDWSK Trigger: TTTTGACCAGTCTCTTCGTGTACTGAGACATGCCAAGGAGGTCCAGCCTGATGTTGTTTCCAAAACATCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 72 bp | CACCTGCTTTATATGAAGATCGCACCAAAGGACCACTaGCCGTATAGAGAAATCCAAGTTCATTCCCTACTT | + |
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Preference number: 6 (lower is better) Translates to: HLLYMKIAPKDH*PYREIQVHSLL Trigger: AAGTAGGGAATGAACTTGGATTTCTCTATACGGCAAGTGGTCCTTTGGTGCGATCTTCATATAAAGCAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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| CDS CAA 90 bp | GGAAAAATTCACCTGCTTTATATGAAGATCGCACCAAAGGACCACTaGCCGTATAGAGAAATCCAAGTTCATTCCCTACTTTTTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GKIHLLYMKIAPKDH*PYREIQVHSLLFPS Trigger: ACTGGGAAAAAGTAGGGAATGAACTTGGATTTCTCTATACGGCAAGTGGTCCTTTGGTGCGATCTTCATATAAAGCAGGTGAATTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031101.10 ENSMUST00000122026.6 |
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