Pregenerated sensors for LHX9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019230Ensembl transcript IDs: ENSMUST00000019374.14, ENSMUST00000046870.13, ENSMUST00000093486.10, ENSMUST00000112026.4, ENSMUST00000112030.9, ENSMUST00000194557.2
Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGCCGCCGCTCTTGGCCGCCAGCTCCGTGTAGCTCAGCTGAGGTaGATATTCCCCTTGCAAGAGGGTCTCGAAGTGTGCGCGGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: QAAALGRQLRVAQLR*IFPLQEGLEVCAAV Trigger: TACTGCCGCGCACACTTCGAGACCCTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTACACGGAGCTGGCGGCCAAGAGCGGCGGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
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| 3UTR TCA 90 bp | AGTGCCGTGGGAGAGAGTCCGATGAGGCATGAGCACCCAAGGGACTaGCAAAAACCAACATGTTCCATAATCACTCAAAGTAGTCCACTT | + |
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Preference number: 1 (lower is better) Translates to: SAVGESPMRHEHPRD*QKPTCSIITQSSPL Trigger: AAGTGGACTACTTTGAGTGATTATGGAACATGTTGGTTTTTGTCAGTCCCTTGGGTGCTCATGCCTCATCGGACTCTCTCCCACGGCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR CCA 90 bp | CAGTTGCCCAGACTGAAGACTGCTGTACATGATAGAAAAGTGCGTTaGGCCTTCCAAGTCTGTTTCACGTGCTTTTTCCTCTTCCCTAGC | + |
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Preference number: 1 (lower is better) Translates to: QLPRLKTAVHDRKVR*AFQVCFTCFFLFPS Trigger: GCTAGGGAAGAGGAAAAAGCACGTGAAACAGACTTGGAAGGCCCAACGCACTTTTCTATCATGTACAGCAGTCTTCAGTCTGGGCAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR TCA 90 bp | GCTGAAGGGACACAGAAACAGACACCAGAACTTTCTACCCAGAGCTaGTGCCTGCATCTTTATCCTTGTCTCTTTCTTGACATTTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: AEGTQKQTPELSTQS*CLHLYPCLFLDISA Trigger: TGCTGAAATGTCAAGAAAGAGACAAGGATAAAGATGCAGGCATCAGCTCTGGGTAGAAAGTTCTGGTGTCTGTTTCTGTGTCCCTTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR CCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTaGTTTTGTTACTGTTCACAGAGAAATGTATCGAGCAGGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: QSKRRETCQWDTCLG*FCYCSQRNVSSRRV Trigger: CACCCTCCTGCTCGATACATTTCTCTGTGAACAGTAACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR CCA 90 bp | ATCAACAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTaGGGTGGTTTTGTTACTGTTCACAGAGAAATGTATCGAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: INSLREEKLANGIHV*GGFVTVHREMYRAG Trigger: TCCTGCTCGATACATTTCTCTGTGAACAGTAACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR TCA 90 bp | TCATCCCTAAATATTTGCTCTTCTTTCCCATTGGTCCCTTGTTTCTaGTGCCTTGTGCACCCTGAACTATACAAAGAACAAAATGTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: SSLNICSSFPLVPCF*CLVHPELYKEQNVR Trigger: TCTGACATTTTGTTCTTTGTATAGTTCAGGGTGCACAAGGCATCAGAAACAAGGGACCAATGGGAAAGAAGAGCAAATATTTAGGGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR GCA 90 bp | ATCGAAAACAGATTCACCCACAGGTCAATACAGACCTTCCCTATATaGACGGTGTCCAAGAAAATGCAACATTACTTCTTTAATCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: IENRFTHRSIQTFPI*TVSKKMQHYFFNLD Trigger: GTCTAGATTAAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATTGACCTGTGGGTGAATCTGTTTTCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR CCA 90 bp | AGCAAGCAGATGAAGTGGATACTTTTGGACTTTACTTTACAGCTATaGTGCTCGATAAATGTGTGGAATTGTTTCAGGAATAATTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SKQMKWILLDFTLQL*CSINVWNCFRNNFL Trigger: GAGAAAATTATTCCTGAAACAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATCCACTTCATCTGCTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR TCA 90 bp | TCAAATAACCATAAAAGGTATCCAGGTACTCTTCAGAGTAATTTCTaGGATCATGCATGGTGTAAACAGAAAAGTCCAAAGGAAAGAAAC | + |
|
Preference number: 1 (lower is better) Translates to: SNNHKRYPGTLQSNF*DHAWCKQKSPKERN Trigger: GTTTCTTTCCTTTGGACTTTTCTGTTTACACCATGCATGATCTCAGAAATTACTCTGAAGAGTACCTGGATACCTTTTATGGTTATTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGCACGGTGCCAGTGCCATTGAAGTAAGGCAAAGCCAAGCCGCCGCTCTTGGTGGATATTCCCCTTaGAAGAGGGTCTCGAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LLHGASAIEVRQSQAAALGGYSP*KRVSKC Trigger: ACACTTCGAGACCCTCTTGCAAGGGGAATATCCACC...AAGAGCGGCGGCTTGGCTTTGCCTTACTTCAATGGCACTGGCACCGTGCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
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| 3UTR CAA 90 bp | GTCATGGTGCGTTCTGGGAGACTGTTAGGAAGTTGGCACCTGTCCTaGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: VMVRSGRLLGSWHLS*ELFLPLFSIQEIKV Trigger: CACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCTCCCAGAACGCACCATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR CAA 90 bp | GGCAGAGCTTCCAGAACCACGATTTCAACACTGACTGAAAATGTATaGGAAAAATCCATTCAGGTTGTTAGTGCCGTGGGAGAGAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: GRASRTTISTLTENV*EKSIQVVSAVGESP Trigger: CGGACTCTCTCCCACGGCACTAACAACCTGAATGGATTTTTCCAATACATTTTCAGTCAGTGTTGAAATCGTGGTTCTGGAAGCTCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCAAACCACCCTCTAGGTaGCAGATCAGGAAAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: CIPAYILFRDFLEHHAQFKPPSR*QIRKRR Trigger: CCTTCTTTTCCTGATCTGTCACCTAGAGGGTGGTTT...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTTGCAGTTGCCCAGACTaGAGACTGCTGTACATGATA | + |
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Preference number: 2 (lower is better) Translates to: QSKRRETCQWDTCLGWFCCSCPD*RLLYMI Trigger: TATCATGTACAGCAGTCTTCAGTCTGGGCAACTGCA...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCCAAGTCTGTTTCACGTaGTTTTTCCTCTTCCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSQVCFT*FFLFPS Trigger: GCTAGGGAAGAGGAAAAAGCACGTGAAACAGACTTG...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTGCTCTTCTTTCCCATTaGTCCCTTGTTTCTGATGCC | + |
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Preference number: 2 (lower is better) Translates to: QSKRRETCQWDTCLGWFCALLSH*SLVSDA Trigger: GGCATCAGAAACAAGGGACCAATGGGAAAGAAGAGC...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTTGTCATGGTGCGTTCTaGGAGACTGTTAGGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: QSKRRETCQWDTCLGWFCCHGAF*ETVRKL Trigger: CAACTTCCTAACAGTCTCCCAGAACGCACCATGACA...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR CAA 90 bp | TTACTGCCAGCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTaGTTAAACCACACGAGGCTAAGCCCTCATTTGTGTCAGACATCA | + |
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Preference number: 2 (lower is better) Translates to: LLPACSGLDMVYLAL*LNHTRLSPHLCQTS Trigger: TGATGTCTGACACAAATGAGGGCTTAGCCTCGTGTGGTTTAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTAAACCACCCTCTAGGTaGCAGATCAGGAAAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: IVSLLTFYSGISLSIMHSKPPSR*QIRKRR Trigger: CCTTCTTTTCCTGATCTGTCACCTAGAGGGTGGTTT...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCAAGAGGCTTTCACTCTaGAAACTGTACAGCAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSKRLSL*KLYSKV Trigger: GACTTTGCTGTACAGTTTTCAGAGTGAAAGCCTCTT...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAACAAGTGTACTGTCCTaGCTCTTTGAGACAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTTSVLS*LFETVL Trigger: GAGCACTGTCTCAAAGAGGCAGGACAGTACACTTGT...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTACAAGTGTACTGTCCTaGCTCTTTGAGACAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCTSVLS*LFETVL Trigger: GAGCACTGTCTCAAAGAGGCAGGACAGTACACTTGT...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCAATTTTCTCCAAATGTaGGGAGGGCATATTACTGCC | + |
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Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSNFLQM*GGHITA Trigger: GGCAGTAATATGCCCTCCCCACATTTGGAGAAAATT...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTGCTCTTCTTTCCCATTaGTCCCTTGTTTCTGATGCC | + |
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Preference number: 2 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCALLSH*SLVSDA Trigger: GGCATCAGAAACAAGGGACCAATGGGAAAGAAGAGC...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAGTTGGCACCTGTCCTTaGAACTTTTTCTCCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTVGTCP*NFFSPC Trigger: ACAAGGGGAGAAAAAGTTCCAAGGACAGGTGCCAAC...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCAGACTGTTAGGAAGTTaGCACCTGTCCTTGGAACTT | + |
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Preference number: 2 (lower is better) Translates to: CIPAYILFRDFLEHHAQFRLLGS*HLSLEL Trigger: AAGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCT...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGTGCAGTTGCCCAGACTaGAGACTGCTGTACATGATA | + |
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Preference number: 2 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQCSCPD*RLLYMI Trigger: TATCATGTACAGCAGTCTTCAGTCTGGGCAACTGCA...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTAAGAGGCTTTCACTCTaGAAACTGTACAGCAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: QSKRRETCQWDTCLGWFCKRLSL*KLYSKV Trigger: GACTTTGCTGTACAGTTTTCAGAGTGAAAGCCTCTT...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCAGATGCAAAAGTGCATaGAGAGCCTTGTGTTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSRCKSA*RALCLE Trigger: TTCTAAACACAAGGCTCTGCATGCACTTTTGCATCT...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR GCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTACAAGTGTACTGTCCTaGCTCTTTGAGACAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: NTDLPYMHGVQENATLLLTSVLS*LFETVL Trigger: GAGCACTGTCTCAAAGAGGCAGGACAGTACACTTGT...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR GCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCGTTTCTGATGCCTTGTaGACCCTGAACTATACAAAG | + |
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Preference number: 2 (lower is better) Translates to: CIPAYILFRDFLEHHAQFVSDAL*TLNYTK Trigger: CTTTGTATAGTTCAGGGTGCACAAGGCATCAGAAAC...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR GCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTCAAGTCTGTTTCACGTaGTTTTTCCTCTTCCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: IVSLLTFYSGISLSIMHSQVCFT*FFLFPS Trigger: GCTAGGGAAGAGGAAAAAGCACGTGAAACAGACTTG...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTGTTGGCACCTGTCCTTaGAACTTTTTCTCCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: NTDLPYMHGVQENATLLLVGTCP*NFFSPC Trigger: ACAAGGGGAGAAAAAGTTCCAAGGACAGGTGCCAAC...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTGTCATGGTGCGTTCTaGGAGACTGTTAGGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: NTDLPYMHGVQENATLLLCHGAF*ETVRKL Trigger: CAACTTCCTAACAGTCTCCCAGAACGCACCATGACA...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGTGTCATGGTGCGTTCTaGGAGACTGTTAGGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQCHGAF*ETVRKL Trigger: CAACTTCCTAACAGTCTCCCAGAACGCACCATGACA...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTAAGTCCACTGGGGTTTaGCTAAGTAAAGCTATTGAC | + |
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Preference number: 2 (lower is better) Translates to: QSKRRETCQWDTCLGWFCKSTGV*LSKAID Trigger: GTCAATAGCTTTACTTAGCCAAACCCCAGTGGACTT...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR CAA 90 bp | AATCAACAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTaGGGGTGGTTTTGTTACTGTTCACAGAGAAATGTATCGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NQQSKRRETCQWDTC*GWFCYCSQRNVSSR Trigger: CCTGCTCGATACATTTCTCTGTGAACAGTAACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTGTTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTATGCCTTGTGCACCCTaGACTATACAAAGAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: QSKRRETCQWDTCLGWFCMPCAP*TIQRTK Trigger: TTTTGTTCTTTGTATAGTTCAGGGTGCACAAGGCAT...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTCAAGGCTTTAAGACTTaGGTGCTTTGGTTTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: IVSLLTFYSGISLSIMHSQGFKT*VLWFLC Trigger: ACAGAGAAACCAAAGCACTCAAGTCTTAAAGCCTTG...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTTACTGCTCTGGAAAATaGTGCTACCTTATGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: IQTFPICTVSKKMQHYFFYCSGK*CYLMCG Trigger: GCCACACATAAGGTAGCATCATTTTCCAGAGCAGTA...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| 3UTR-3UTR TCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAACAGTCAGAGACTGGCTaGGTTTTCTTTGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEQSETG*VFFVCV Trigger: CACACACACAAAGAAAACTCAGCCAGTCTCTGACTG...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR GCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCATATTACTGCCAGCTTaGTCTGGTTTAGATATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSILLPA*SGLDMV Trigger: AACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAGTTTCTGATGCCTTGTaGACCCTGAACTATACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTVSDAL*TLNYTK Trigger: CTTTGTATAGTTCAGGGTGCACAAGGCATCAGAAAC...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCTTGTCTTCACTGCAGTaGATTTCCGATCAAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSLSSLQ*ISDQTF Trigger: AAAAGTTTGATCGGAAATCCACTGCAGTGAAGACAA...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCTTTACTTTACAGCTATaGTGCTCGATAAATGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSFTLQL*CSINVW Trigger: CCACACATTTATCGAGCACCATAGCTGTAAAGTAAA...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTAGACTGTTAGGAAGTTaGCACCTGTCCTTGGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: IQTFPICTVSKKMQHYFFRLLGS*HLSLEL Trigger: AAGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCT...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 90 bp | ATCCTGGCAATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTaGAGCATCATGCACAGTTCTGAACTTGTCCTTTTTGCTATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ILAIVSLLTFYSGIS*SIMHSSELVLFAMK Trigger: TTTCATAGCAAAAAGGACAAGTTCAGAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAATTGCCAGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAATGCCTTGTGCACCCTaGACTATACAAAGAACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTMPCAP*TIQRTK Trigger: TTTTGTTCTTTGTATAGTTCAGGGTGCACAAGGCAT...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCCAAAATATTTCAAAATaGAACCACCCTCTAGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: CIPAYILFRDFLEHHAQFQNISK*NHPLGD Trigger: GTCACCTAGAGGGTGGTTTCATTTTGAAATATTTTG...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR TCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTCAAGGCTTTAAGACTTaGGTGCTTTGGTTTCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: IQTFPICTVSKKMQHYFFQGFKT*VLWFLC Trigger: ACAGAGAAACCAAAGCACTCAAGTCTTAAAGCCTTG...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR TCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAACAGAAGCAGATAGATaGACATTCACCACTGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKTEADR*TFTTAQ Trigger: CTGGGCAGTGGTGAATGTTCATCTATCTGCTTCTGT...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR GCA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTAGATGCAAAAGTGCATaGAGAGCCTTGTGTTTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCRCKSA*RALCLE Trigger: TTCTAAACACAAGGCTCTGCATGCACTTTTGCATCT...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCGCCTCTTTGAGACAGTaGTCAAAATTAATTTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSASLRQ*SKLIST Trigger: TGTTGAAATTAATTTTGAGCACTGTCTCAAAGAGGC...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCTCATCCCTAAATATTTaGTCTTCTTTCCCATTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CIPAYILFRDFLEHHAQFSSLNI*SSFPLV Trigger: GACCAATGGGAAAGAAGAGCAAATATTTAGGGATGA...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGTACATGATAGAAAAGTaGGTTGGGCCTTCCAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQYMIEK*VGPSKS Trigger: AGACTTGGAAGGCCCAACGCACTTTTCTATCATGTA...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR GCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAGCCAAGTGGTGTAGATaGTACACACCAAGCTGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKAKWCR*YTPSCY Trigger: ATAGCAGCTTGGTGTGTAGCATCTACACCACTTGGC...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTTTGTCTTCACTGCAGTaGATTTCCGATCAAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: QSKRRETCQWDTCLGWFCLSSLQ*ISDQTF Trigger: AAAAGTTTGATCGGAAATCCACTGCAGTGAAGACAA...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGAATTTTCTCCAAATGTaGGGAGGGCATATTACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQNFLQM*GGHITA Trigger: GGCAGTAATATGCCCTCCCCACATTTGGAGAAAATT...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCGGAAATCAAAGTGTTTaGGAAAACGTTCACAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSGNQSV*ENVHNS Trigger: AGAATTGTGAACGTTTTCCCAAACACTTTGATTTCC...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGAAGTCCACTGGGGTTTaGCTAAGTAAAGCTATTGAC | + |
|
Preference number: 2 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQKSTGV*LSKAID Trigger: GTCAATAGCTTTACTTAGCCAAACCCCAGTGGACTT...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 90 bp | CAGATAGGACTGATACACATTAGCAAGCAGATGAAGTGGATACTTTaGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: QIGLIHISKQMKWIL*DFTLQLWCSINVWN Trigger: ATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATCCACTTCATCTGCTTGCTAATGTGTATCAGTCCTATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGATGCCTTGTGCACCCTaGACTATACAAAGAACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQMPCAP*TIQRTK Trigger: TTTTGTTCTTTGTATAGTTCAGGGTGCACAAGGCAT...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTCCACGATTTCAACACTaGCTGAAAATGTATTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: IVSLLTFYSGISLSIMHSPRFQH*LKMYWK Trigger: TTTCCAATACATTTTCAGTCAGTGTTGAAATCGTGG...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTACTTTACAGCTATGGTaGTCGATAAATGTGTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: IVSLLTFYSGISLSIMHSTLQLW*SINVWN Trigger: ATTCCACACATTTATCGAGCACCATAGCTGTAAAGT...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACATTGTCTTCACTGCAGTaGATTTCCGATCAAACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTLSSLQ*ISDQTF Trigger: AAAAGTTTGATCGGAAATCCACTGCAGTGAAGACAA...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACATTTACTTTACAGCTATaGTGCTCGATAAATGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTFTLQL*CSINVW Trigger: CCACACATTTATCGAGCACCATAGCTGTAAAGTAAA...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTAGCAAGCAGATGAAGTaGATACTTTTGGACTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: IVSLLTFYSGISLSIMHSSKQMK*ILLDFT Trigger: AGTAAAGTCCAAAAGTATCCACTTCATCTGCTTGCT...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGCCACGATTTCAACACTaGCTGAAAATGTATTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQPRFQH*LKMYWK Trigger: TTTCCAATACATTTTCAGTCAGTGTTGAAATCGTGG...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR TCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAACATCCACAAGGCTTCTaGGTTTATCTACTTAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEHPQGF*VYLLKS Trigger: ACTCTTAAGTAGATAAACTCAGAAGCCTTGTGGATG...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGATATTACTGCCAGCTTaGTCTGGTTTAGATATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQILLPA*SGLDMV Trigger: AACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAGCCTCTTTGAGACAGTaGTCAAAATTAATTTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTASLRQ*SKLIST Trigger: TGTTGAAATTAATTTTGAGCACTGTCTCAAAGAGGC...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTAGCAAGCAGATGAAGTaGATACTTTTGGACTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: NTDLPYMHGVQENATLLLSKQMK*ILLDFT Trigger: AGTAAAGTCCAAAAGTATCCACTTCATCTGCTTGCT...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTGGAAATCAAAGTGTTTaGGAAAACGTTCACAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: IVSLLTFYSGISLSIMHSGNQSV*ENVHNS Trigger: AGAATTGTGAACGTTTTCCCAAACACTTTGATTTCC...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAAAACTCATAGCCAAGTaGTGTAGATGCTACACACCA | + |
|
Preference number: 2 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKKLIAK*CRCYTP Trigger: TGGTGTGTAGCATCTACACCACTTGGCTATGAGTTT...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR CCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAGTTTCAGTCAGAGACTaGCTGAGTTTTCTTTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKVSVRD*LSFLCV Trigger: CACACAAAGAAAACTCAGCCAGTCTCTGACTGAAAC...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR CCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAATTAAGGGGTGCAAAATaGTGGACAGTATGTGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKLRGAK*WTVCAK Trigger: CTTTGCACATACTGTCCACCATTTTGCACCCCTTAA...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR GCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTGCCTCTTTGAGACAGTaGTCAAAATTAATTTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: NTDLPYMHGVQENATLLLASLRQ*SKLIST Trigger: TGTTGAAATTAATTTTGAGCACTGTCTCAAAGAGGC...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATTGCTACACACCAAGCTaGTATTTTATTCCCCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYCYTPS*YFIPQI Trigger: TATTTGGGGAATAAAATAGCAGCTTGGTGTGTAGCA...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR CCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAGTGTGTGTGTGTGTTTaGGAGGTCAAAAGTATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKVCVCV*EVKSIE Trigger: TTCTATACTTTTGACCTCCCAAACACACACACACAC...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR CCA 72 bp | GCTCTTGGCCGCCAGCTCCGTGTAGCTCAGCTGAGGTaGATATTCCCCTTGCAAGAGGGTCTCGAAGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALGRQLRVAQLR*IFPLQEGLEVC Trigger: GCACACTTCGAGACCCTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTACACGGAGCTGGCGGCCAAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCGCCAGCTCCGTGTAGCTCAGCTGAGGTGGATATTCCCCTTGCAAGAGGGCCCGTGGTCAAGGTCTaGTTGCAAGTGGAACAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WPPAPCSSAEVDIPLARGPVVKV*LQVEQV Trigger: CACTTGTTCCACTTGCAACAAGACCTTGACCACGGG...CCCTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTACACGGAGCTGGCGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| 3UTR CCA 72 bp | CTTGTCATGGTGCGTTCTGGGAGACTGTTAGGAAGTTaGCACCTGTCCTTGGAACTTTTTCTCCCCTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LVMVRSGRLLGS*HLSLELFLPLF Trigger: AAACAAGGGGAGAAAAAGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCTCCCAGAACGCACCATGACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR TCA 72 bp | GGAGAGAGTCCGATGAGGCATGAGCACCCAAGGGACTaGCAAAAACCAACATGTTCCATAATCACTCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GESPMRHEHPRD*QKPTCSIITQS Trigger: ACTTTGAGTGATTATGGAACATGTTGGTTTTTGTCAGTCCCTTGGGTGCTCATGCCTCATCGGACTCTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | GGATCAATTTGCCAGAAGTTAGACTTGTCTAGGCATTaGGGAGGTAGAAGCTATAAAATCCGGTGCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSICQKLDLSRH*GGRSYKIRCPA Trigger: TGCAGGGCACCGGATTTTATAGCTTCTACCTCCCCAATGCCTAGACAAGTCTAACTTCTGGCAAATTGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTGAGACTGTTAGGAAGTaGGCACCTGTCCTTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: QSKRRETCQWDTCLGWFCETVRK*APVLGT Trigger: AGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCTC...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR TCA 72 bp | CCAAAGGAAAGAAACACTCCTGATGGTTCCAACAAGTaGGCTGAAGGGACACAGAAACAGACACCAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: PKERNTPDGSNK*AEGTQKQTPEL Trigger: AAGTTCTGGTGTCTGTTTCTGTGTCCCTTCAGCTCACTTGTTGGAACCATCAGGAGTGTTTCTTTCCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | AGACTGAAGACTGCTGTACATGATAGAAAAGTGCGTTaGGCCTTCCAAGTCTGTTTCACGTGCTTTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RLKTAVHDRKVR*AFQVCFTCFFL Trigger: GAGGAAAAAGCACGTGAAACAGACTTGGAAGGCCCAACGCACTTTTCTATCATGTACAGCAGTCTTCAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | TGTATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTaGTTTTGTCCCAGCACTTCCCGCTTCCAATGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CISLKAYNDRRL*FCPSTSRFQCF Trigger: GAAGCATTGGAAGCGGGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAGAGACTGTTAGGAAGTaGGCACCTGTCCTTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTETVRK*APVLGT Trigger: AGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCTC...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR TCA 72 bp | ACACAGAAACAGACACCAGAACTTTCTACCCAGAGCTaGTGCCTGCATCTTTATCCTTGTCTCTTTCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TQKQTPELSTQS*CLHLYPCLFLD Trigger: GTCAAGAAAGAGACAAGGATAAAGATGCAGGCATCAGCTCTGGGTAGAAAGTTCTGGTGTCTGTTTCTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR GCA 72 bp | TTCTCCAAATGTGGGGAGGGCATATTACTGCCAGCTTaGTCTGGTTTAGATATGGTTTATCTCGCTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FSKCGEGILLPA*SGLDMVYLALL Trigger: CAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATATGCCCTCCCCACATTTGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTGAGACTGTTAGGAAGTaGGCACCTGTCCTTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: IQTFPICTVSKKMQHYFFETVRK*APVLGT Trigger: AGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCTC...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTCTCAAAGTAGTCCACTaGTCATGGTGCGTTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: NTDLPYMHGVQENATLLLLKVVH*SWCVLG Trigger: TCCCAGAACGCACCATGACAAGTGGACTACTTTGAG...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTCTCAAAGTAGTCCACTaGTCATGGTGCGTTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IQTFPICTVSKKMQHYFFLKVVH*SWCVLG Trigger: TCCCAGAACGCACCATGACAAGTGGACTACTTTGAG...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTGCCAGAAGTTAGACTaGTCTAGGCATTGGGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: NTDLPYMHGVQENATLLLCQKLD*SRHWGG Trigger: ACCTCCCCAATGCCTAGACAAGTCTAACTTCTGGCA...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCGTGCCTAGGATCAATTaGCCAGAAGTTAGACTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: CIPAYILFRDFLEHHAQFVPRIN*PEVRLV Trigger: GACAAGTCTAACTTCTGGCAAATTGATCCTAGGCAC...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR GCA 72 bp | CTTCTTTCCCATTGGTCCCTTGTTTCTGATGCCTTGTaGACCCTGAACTATACAAAGAACAAAATGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLSHWSLVSDAL*TLNYTKNKMSE Trigger: CTCTGACATTTTGTTCTTTGTATAGTTCAGGGTGCACAAGGCATCAGAAACAAGGGACCAATGGGAAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR GCA 72 bp | GAGCAGGAGGGTGCTGTCTGGTTGAAACATCTATTTTaGAACACAGTTAACAAGGAAATGAATCCTGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: EQEGAVWLKHLF*NTVNKEMNPGN Trigger: ATTGCCAGGATTCATTTCCTTGTTAACTGTGTTGCAAAATAGATGTTTCAACCAGACAGCACCCTCCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR GCA 72 bp | AACAGACACCAGAACTTTCTACCCAGAGCTGATGCCTaGATCTTTATCCTTGTCTCTTTCTTGACATTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NRHQNFLPRADA*IFILVSFLTFQ Trigger: CTGAAATGTCAAGAAAGAGACAAGGATAAAGATGCAGGCATCAGCTCTGGGTAGAAAGTTCTGGTGTCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCAACCTAATAGTGTCTTaGTCTTCACTGCAGTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSNLIVS*SSLQWI Trigger: AATCCACTGCAGTGAAGACAAAGACACTATTAGGTT...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCAGTGCATGCAGAGCCTaGTGTTTAGAAAGGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: CIPAYILFRDFLEHHAQFSACRA*CLERKN Trigger: ATTCTTCCTTTCTAAACACAAGGCTCTGCATGCACT...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCACAATAAATTTGCAGTaGCCCAGACTGAAGACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CIPAYILFRDFLEHHAQFTINLQ*PRLKTA Trigger: AGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGT...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCTGCCAAACAATAAATTaGCAGTTGCCCAGACTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CIPAYILFRDFLEHHAQFCQTIN*QLPRLK Trigger: CTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCA...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTTATTCAGGGATTTCCTaGAGCATCATGCACAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QSKRRETCQWDTCLGWFCYSGIS*SIMHSS Trigger: AGAACTGTGCATGATGCTCAAGGAAATCCCTGAATA...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR TCA 72 bp | CAGAGAAATGTATCGAGCAGGAGGGTGCTGTCTGGTTaGAACATCTATTTTGCAACACAGTTAACAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QRNVSSRRVLSG*NIYFATQLTRK Trigger: TTTCCTTGTTAACTGTGTTGCAAAATAGATGTTTCAACCAGACAGCACCCTCCTGCTCGATACATTTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR GCA 72 bp | AGATTCACCCACAGGTCAATACAGACCTTCCCTATATaGACGGTGTCCAAGAAAATGCAACATTACTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RFTHRSIQTFPI*TVSKKMQHYFF Trigger: AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATTGACCTGTGGGTGAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR GCA 72 bp | CTCATAGCCAAGTGGTGTAGATGCTACACACCAAGCTaGTATTTTATTCCCCAAATATCTTGTGGGTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LIAKWCRCYTPS*YFIPQISCGLE Trigger: TTCTAACCCACAAGATATTTGGGGAATAAAATAGCAGCTTGGTGTGTAGCATCTACACCACTTGGCTATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
||
| 3UTR CCA 72 bp | CAAATGTGGGGAGGGCATATTACTGCCAGCTTGCTCTaGTTTAGATATGGTTTATCTCGCTCTTTTGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QMWGGHITASLL*FRYGLSRSFVK Trigger: TTTAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATATGCCCTCCCCACATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | CTTCACACCCCAGTGTTCTCTGTAAGCATACTGCTCTaGAAAATGATGCTACCTTATGTGTGGCTAATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LHTPVFSVSILL*KMMLPYVWLIK Trigger: TTTTATTAGCCACACATAAGGTAGCATCATTTTCCAGAGCAGTATGCTTACAGAGAACACTGGGGTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | TTCACAGAGAAATGTATCGAGCAGGAGGGTGCTGTCTaGTTGAAACATCTATTTTGCAACACAGTTAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTEKCIEQEGAV*LKHLFCNTVNK Trigger: CTTGTTAACTGTGTTGCAAAATAGATGTTTCAACCAGACAGCACCCTCCTGCTCGATACATTTCTCTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | AGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTaGTTTTGTTACTGTTCACAGAGAAATGTATCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RRETCQWDTCLG*FCYCSQRNVSS Trigger: GCTCGATACATTTCTCTGTGAACAGTAACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | ACTTCGACCACCAGAGGAGATTTAAGGGGTGCAAAATaGTGGACAGTATGTGCAAAGTTATTCTTAACAATC | + |
|
Preference number: 3 (lower is better) Translates to: TSTTRGDLRGAK*WTVCAKLFLTI Trigger: GATTGTTAAGAATAACTTTGCACATACTGTCCACCATTTTGCACCCCTTAAATCTCCTCTGGTGGTCGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTCATATTACTGCCAGCTaGCTCTGGTTTAGATATGGT | + |
|
Preference number: 3 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCHITAS*LWFRYG Trigger: ACCATATCTAAACCAGAGCAAGCTGGCAGTAATATG...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTCTCATCCCTAAATATTaGCTCTTCTTTCCCATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QSKRRETCQWDTCLGWFCLIPKY*LFFPIG Trigger: ACCAATGGGAAAGAAGAGCAAATATTTAGGGATGAG...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCAGGAAATCAAAGTGTTaGGGAAAACGTTCACAATTC | + |
|
Preference number: 3 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSRKSKC*GKRSQF Trigger: GAATTGTGAACGTTTTCCCAAACACTTTGATTTCCT...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTGAACTTTTTCTCCCCTaGTTTAGCATTCAGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: QSKRRETCQWDTCLGWFCELFLP*FSIQEI Trigger: GATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTC...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTGCCAAACAATAAATTaGCAGTTGCCCAGACTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IVSLLTFYSGISLSIMHSCQTIN*QLPRLK Trigger: CTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCA...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGGTGCCTAGGATCAATTaGCCAGAAGTTAGACTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQVPRIN*PEVRLV Trigger: GACAAGTCTAACTTCTGGCAAATTGATCCTAGGCAC...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAAACCTAATAGTGTCTTaGTCTTCACTGCAGTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTNLIVS*SSLQWI Trigger: AATCCACTGCAGTGAAGACAAAGACACTATTAGGTT...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTCATATTACTGCCAGCTaGCTCTGGTTTAGATATGGT | + |
|
Preference number: 3 (lower is better) Translates to: IQTFPICTVSKKMQHYFFHITAS*LWFRYG Trigger: ACCATATCTAAACCAGAGCAAGCTGGCAGTAATATG...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGAGTGCATGCAGAGCCTaGTGTTTAGAAAGGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQSACRA*CLERKN Trigger: ATTCTTCCTTTCTAAACACAAGGCTCTGCATGCACT...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTCTCATCCCTAAATATTaGCTCTTCTTTCCCATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCLIPKY*LFFPIG Trigger: ACCAATGGGAAAGAAGAGCAAATATTTAGGGATGAG...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTAGGAAATCAAAGTGTTaGGGAAAACGTTCACAATTC | + |
|
Preference number: 3 (lower is better) Translates to: QSKRRETCQWDTCLGWFCRKSKC*GKRSQF Trigger: GAATTGTGAACGTTTTCCCAAACACTTTGATTTCCT...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTGAACTTTTTCTCCCCTaGTTTAGCATTCAGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: IVSLLTFYSGISLSIMHSELFLP*FSIQEI Trigger: GATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTC...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTTGCCAAACAATAAATTaGCAGTTGCCCAGACTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IQTFPICTVSKKMQHYFFCQTIN*QLPRLK Trigger: CTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCA...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCTTCAGTTCCAATTTTTaGACATCGCCTGTAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CIPAYILFRDFLEHHAQFFSSNF*TSPVKQ Trigger: TTGCTTTACAGGCGATGTCAAAAAATTGGAACTGAA...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR TCA 72 bp | AATATTTGCTCTTCTTTCCCATTGGTCCCTTGTTTCTaGTGCCTTGTGCACCCTGAACTATACAAAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: NICSSFPLVPCF*CLVHPELYKEQ Trigger: TTGTTCTTTGTATAGTTCAGGGTGCACAAGGCATCAGAAACAAGGGACCAATGGGAAAGAAGAGCAAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR GCA 72 bp | CGACAATACTGTAAACTCATAGCCAAGTGGTGTAGATaGTACACACCAAGCTGCTATTTTATTCCCCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: RQYCKLIAKWCR*YTPSCYFIPQI Trigger: TATTTGGGGAATAAAATAGCAGCTTGGTGTGTAGCATCTACACCACTTGGCTATGAGTTTACAGTATTGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
||
| 3UTR CCA 72 bp | CAGATAGGACTGATACACATTAGCAAGCAGATGAAGTaGATACTTTTGGACTTTACTTTACAGCTATGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QIGLIHISKQMK*ILLDFTLQLWC Trigger: GCACCATAGCTGTAAAGTAAAGTCCAAAAGTATCCACTTCATCTGCTTGCTAATGTGTATCAGTCCTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | ATCGCCTGTAAAGCAAGGAATTGTACATCAGACTTTTaGAGTTTTAGTGTTACTTTCCTTCCAGGCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IACKARNCTSDF*SFSVTFLPGFR Trigger: TCTGAAGCCTGGAAGGAAAGTAACACTAAAACTCCAAAAGTCTGATGTACAATTCCTTGCTTTACAGGCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACATGTTGTCATTTGGGATaGCTATTTCGTTTTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTCCHLG*LFRFHP Trigger: TGGATGAAAACGAAATAGCAATCCCAAATGACAACA...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTTGTTGTCATTTGGGATaGCTATTTCGTTTTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCCCHLG*LFRFHP Trigger: TGGATGAAAACGAAATAGCAATCCCAAATGACAACA...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTGAACTTTTTCTCCCCTaGTTTAGCATTCAGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: NTDLPYMHGVQENATLLLELFLP*FSIQEI Trigger: GATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTC...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATATTACTGCCAGCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTTGTTAAACCTAATAGTGTCTTaGTCTTCACTGCAGTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: ILLPACSGLDMVYLALLLNLIVS*SSLQWI Trigger: AATCCACTGCAGTGAAGACAAAGACACTATTAGGTT...TAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTTGTTGTCATTTGGGATaGCTATTTCGTTTTCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: IQTFPICTVSKKMQHYFFCCHLG*LFRFHP Trigger: TGGATGAAAACGAAATAGCAATCCCAAATGACAACA...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGAGGAAATCAAAGTGTTaGGGAAAACGTTCACAATTC | + |
|
Preference number: 3 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQRKSKC*GKRSQF Trigger: GAATTGTGAACGTTTTCCCAAACACTTTGATTTCCT...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR TCA 72 bp | CTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCTaGACTTGTCCTTTTTGCTATGAAATTCAGCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LFRDFLEHHAQF*TCPFCYEIQQN Trigger: ATTTTGCTGAATTTCATAGCAAAAAGGACAAGTTCAGAACTGTGCATGATGCTCAAGGAAATCCCTGAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR TCA 72 bp | CATAAAAGGTATCCAGGTACTCTTCAGAGTAATTTCTaGGATCATGCATGGTGTAAACAGAAAAGTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HKRYPGTLQSNF*DHAWCKQKSPK Trigger: CTTTGGACTTTTCTGTTTACACCATGCATGATCTCAGAAATTACTCTGAAGAGTACCTGGATACCTTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CCA 72 bp | CATGATAAAATACAAAGAATAGTTTCAGTCAGAGACTaGCTGAGTTTTCTTTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HDKIQRIVSVRD*LSFLCVCVCVC Trigger: ACACACACACACACACACACAAAGAAAACTCAGCCAGTCTCTGACTGAAACTATTCTTTGTATTTTATCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR CCA 72 bp | ATGAAGTGGATACTTTTGGACTTTACTTTACAGCTATaGTGCTCGATAAATGTGTGGAATTGTTTCAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: MKWILLDFTLQL*CSINVWNCFRN Trigger: ATTCCTGAAACAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATCCACTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCAAAGCCAAGCCGCCGCTCTTGGCCGCCAGCTCCGTGTAGCTCAGCTGGTGGAAGAGCATGGCTaGGGGGCGGAAAGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: VRQSQAAALGRQLRVAQLVEEHG*GAERTR Trigger: TCGTGTCCTTTCCGCCCCCCAGCCATGCTCTTCCAC...CAGCTGAGCTACACGGAGCTGGCGGCCAAGAGCGGCGGCTTGGCTTTGCCTTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGCAAAGCCAAGCCGCCGCTCTTGGCCGCCAGCTCCGTGTAGCTCAGCTCAGCGGGCACATCTCTaGACAGAGAACCTTCGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAKPSRRSWPPAPCSSAQRAHL*TENLRV Trigger: GACGCGAAGGTTCTCTGTGCAGAGATGTGCCCGCTG...AGCTGAGCTACACGGAGCTGGCGGCCAAGAGCGGCGGCTTGGCTTTGCCTTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGGTCCCGGTCCAAGTGGTCTGCCTCGTTCTCATTACAACCTGAGTTGTTCGCGGCCGTTGAGCTaGGTGCCTTTGGTCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGPGPSGLPRSHYNLSCSRPLS*VPLVRR Trigger: CCGTCTGACCAAAGGCACTCAGCTCAACGGCCGCGA...ACAACTCAGGTTGTAATGAGAACGAGGCAGACCACTTGGACCGGGACCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGGTCCCGGTCCAAGTGGTCTGCCTCGTTCTCATTACAACCTGAGTTGTTCGCGTCGCGGCCGTTaGGCTGAGTGCCTTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGPGPSGLPRSHYNLSCSRRGR*AECLWS Trigger: TGACCAAAGGCACTCAGCTCAACGGCCGCGACGCGA...ACAACTCAGGTTGTAATGAGAACGAGGCAGACCACTTGGACCGGGACCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCACGGTGCCAGTGCCATTGAAGTAAGGCAAAGCCAAGCCGCCGCTCTTGACGGGCCTCAGTCTTaGATCTGCGCTCCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHGASAIEVRQSQAAALDGPQS*ICAPSP Trigger: AGGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTC...AAGAGCGGCGGCTTGGCTTTGCCTTACTTCAATGGCACTGGCACCGTGCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS-3UTR CCA 90 bp | CGTGTAGCTCAGCTGAGGTGGATATTCCCCTTGCAAGAGGGTCTCGAAGTGTGCGCGGAAATGCCAAGGTaGCAGCGGGCACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVAQLRWIFPLQEGLEVCAEMPR*QRAHLC Trigger: GCAGAGATGTGCCCGCTGCCACCTTGGCATTTCCGC...GCACACTTCGAGACCCTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| 3UTR CAA 72 bp | CAGCTCCGTGTAGCTCAGCTGAGGTGGATATTCCCCTaGCAAGAGGGTCTCGAAGTGTGCGCGGCAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: QLRVAQLRWIFP*QEGLEVCAAVH Trigger: GTGTACTGCCGCGCACACTTCGAGACCCTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTACACGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCCGTGTAGCTCAGCTGAGGTGGATATTCCCCTTGCAAGAGGGTCTCGAGCTCCATCTCCTCCATaGTACCTTGGATGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPCSSAEVDIPLARGSRAPSPP*YLGCGL Trigger: GAGGCCACATCCAAGGTATCATGGAGGAGATGGAGC...TCGAGACCCTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTACACGGAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCTCGCGGCCGTTGAGCTaGGTGCCTTTGGTCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSSRPLS*VPLVRR Trigger: CCGTCTGACCAAAGGCACTCAGCTCAACGGCCGCGA...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTCAGGCTTCTCCGGGCTaGGAGGGGGCATACCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IVSLLTFYSGISLSIMHSQASPG*EGAYPR Trigger: ACGCGGGTATGCCCCCTCTCAGCCCGGAGAAGCCTG...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTCCGCGTCGCGGCCGTTaGGCTGAGTGCCTTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCPRRGR*AECLWS Trigger: TGACCAAAGGCACTCAGCTCAACGGCCGCGACGCGG...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTCAGGCTTCTCCGGGCTaGGAGGGGGCATACCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IQTFPICTVSKKMQHYFFQASPG*EGAYPR Trigger: ACGCGGGTATGCCCCCTCTCAGCCCGGAGAAGCCTG...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCAGTCTCGGGCGCGCATaGCCATCTCAGAGGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSSLGRA*PSQRRK Trigger: TTTCCGCCTCTGAGATGGTCATGCGCGCCCGAGACT...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAAGCGCCGCTGTCTGCTaGGGGCGGGGCCGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKSAAVC*GRGRKR Trigger: TCGCTTCCGGCCCCGCCCTCAGCAGACAGCGGCGCT...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR GCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGCGGGGCCGCCCCTTCTaGACGGTGCCAGTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQRGRPF*TVPVPL Trigger: CAATGGCACTGGCACCGTGCAGAAGGGGCGGCCCCG...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTCGGGGCCGCCCCTTCTaGACGGTGCCAGTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NTDLPYMHGVQENATLLLRGRPF*TVPVPL Trigger: CAATGGCACTGGCACCGTGCAGAAGGGGCGGCCCCG...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTCCAAGCCGCCGCTCTTaGCCGCCAGCTCCGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTDLPYMHGVQENATLLLPSRRS*PPAPCS Trigger: GCTACACGGAGCTGGCGGCCAAGAGCGGCGGCTTGG...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTCCAAGCCGCCGCTCTTaGCCGCCAGCTCCGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQTFPICTVSKKMQHYFFPSRRS*PPAPCS Trigger: GCTACACGGAGCTGGCGGCCAAGAGCGGCGGCTTGG...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTCCGCGTCGCGGCCGTTaGGCTGAGTGCCTTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQTFPICTVSKKMQHYFFPRRGR*AECLWS Trigger: TGACCAAAGGCACTCAGCTCAACGGCCGCGACGCGG...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAACAGGCTTCTCCGGGCTaGGAGGGGGCATACCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEQASPG*EGAYPR Trigger: ACGCGGGTATGCCCCCTCTCAGCCCGGAGAAGCCTG...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATCAGTGCCGGGTGGAGTaGGAGCGCCGCTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYQCRVE*ERRCLL Trigger: CAGCAGACAGCGGCGCTCTCACTCCACCCGGCACTG...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR GCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCGAGGGTCTCGAAGTGTaGGCGGCAGTACACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIPAYILFRDFLEHHAQFEGLEV*AAVHQA Trigger: AGCCTGGTGTACTGCCGCGCACACTTCGAGACCCTC...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTGCGGAAATGCCAAGGTaGCAGCGGGCACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSKRRETCQWDTCLGWFCAEMPR*QRAHLC Trigger: GCAGAGATGTGCCCGCTGCCACCTTGGCATTTCCGC...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | ATATTACTGCCAGCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTTGTTACCAAGCCGCCGCTCTTaGCCGCCAGCTCCGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLPACSGLDMVYLALLLPSRRS*PPAPCS Trigger: GCTACACGGAGCTGGCGGCCAAGAGCGGCGGCTTGG...TAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATGGTCGCAGTGCCGGGTaGAGTGAGAGCGCCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYGRSAG*SESAAV Trigger: GACAGCGGCGCTCTCACTCCACCCGGCACTGCGACC...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTCGCGGCCGTTGAGCTaGGTGCCTTTGGTCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: NTDLPYMHGVQENATLLLSRPLS*VPLVRR Trigger: CCGTCTGACCAAAGGCACTCAGCTCAACGGCCGCGA...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTTCGCGGCCGTTGAGCTaGGTGCCTTTGGTCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: IQTFPICTVSKKMQHYFFSRPLS*VPLVRR Trigger: CCGTCTGACCAAAGGCACTCAGCTCAACGGCCGCGA...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAACCGCGTCGCGGCCGTTaGGCTGAGTGCCTTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEPRRGR*AECLWS Trigger: TGACCAAAGGCACTCAGCTCAACGGCCGCGACGCGG...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | ATATTACTGCCAGCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTTGTTACCGCGTCGCGGCCGTTaGGCTGAGTGCCTTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLPACSGLDMVYLALLLPRRGR*AECLWS Trigger: TGACCAAAGGCACTCAGCTCAACGGCCGCGACGCGG...TAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTAGTCTCGGGCGCGCATaGCCATCTCAGAGGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCSLGRA*PSQRRK Trigger: TTTCCGCCTCTGAGATGGTCATGCGCGCCCGAGACT...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAACGGGGCCGCCCCTTCTaGACGGTGCCAGTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKRGRPF*TVPVPL Trigger: CAATGGCACTGGCACCGTGCAGAAGGGGCGGCCCCG...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTGTGGAAGAGCATGGCTaGGGGGCGGAAAGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: IVSLLTFYSGISLSIMHSVEEHG*GAERTR Trigger: TCGTGTCCTTTCCGCCCCCCAGCCATGCTCTTCCAC...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019374.14 |
||
| CDS-3UTR CCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTGACGGGCCTCAGTCTTaGATCTGCGCTCCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSKRRETCQWDTCLGWFCDGPQS*ICAPSP Trigger: AGGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTC...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCGACGGGCCTCAGTCTTaGATCTGCGCTCCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CIPAYILFRDFLEHHAQFDGPQS*ICAPSP Trigger: AGGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTC...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAACCAAGCCGCCGCTCTTaGCCGCCAGCTCCGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKPSRRS*PPAPCS Trigger: GCTACACGGAGCTGGCGGCCAAGAGCGGCGGCTTGG...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR CAA 72 bp | ACTTGTCATGGTGCGTTCTGGGAGACTGTTAGGAAGTaGGCACCTGTCCTTGGAACTTTTTCTCCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCHGAFWETVRK*APVLGTFSPLV Trigger: AACAAGGGGAGAAAAAGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCTCCCAGAACGCACCATGACAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATTCGCGGCCGTTGAGCTaGGTGCCTTTGGTCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYSRPLS*VPLVRR Trigger: CCGTCTGACCAAAGGCACTCAGCTCAACGGCCGCGA...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCCCGTTTGGTCTTCTGTaGAGGTGGATAAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSPFGLL*RWIRLL Trigger: CAGCAGCCTTATCCACCTTCACAGAAGACCAAACGG...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTGCGGAAATGCCAAGGTaGCAGCGGGCACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTDLPYMHGVQENATLLLAEMPR*QRAHLC Trigger: GCAGAGATGTGCCCGCTGCCACCTTGGCATTTCCGC...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTCCTCCGGAGATTCCGTaGAAGAGCATGGCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVSLLTFYSGISLSIMHSPPEIP*KSMAAS Trigger: AGAGGCAGCCATGCTCTTCCACGGAATCTCCGGAGG...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTGCTCCATCTCCTCCATaGTACCTTGGATGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCAPSPP*YLGCGL Trigger: GAGGCCACATCCAAGGTATCATGGAGGAGATGGAGC...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAGCTCCATCTCCTCCATaGTACCTTGGATGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTAPSPP*YLGCGL Trigger: GAGGCCACATCCAAGGTATCATGGAGGAGATGGAGC...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACACCTTGGCAAAGCAGGTaGGCTCAGATTCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTPWQSR*AQIPEP Trigger: TGGCTCTGGAATCTGAGCTCACCTGCTTTGCCAAGG...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAAAGTCTCGGGCGCGCATaGCCATCTCAGAGGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKESLGRA*PSQRRK Trigger: TTTCCGCCTCTGAGATGGTCATGCGCGCCCGAGACT...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGAGTCTCGGGCGCGCATaGCCATCTCAGAGGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DTFGLYFTAMVLDKCVELSLGRA*PSQRRK Trigger: TTTCCGCCTCTGAGATGGTCATGCGCGCCCGAGACT...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTCGGTGCCAGTGCCATTaGAGTAAGGCAAAGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVSLLTFYSGISLSIMHSRCQCH*SKAKPS Trigger: GCTTGGCTTTGCCTTACTTCAATGGCACTGGCACCG...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCGGAGCTGGTGATGCTTaGAAGAAGTTCGCATCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSGAGDA*KKFASV Trigger: AACGGATGCGAACTTCTTTCAAGCATCACCAGCTCC...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCATGGTCCGGAGCTGGTaGTGCTTGAAAGAAGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CIPAYILFRDFLEHHAQFMVRSW*CLKEVR Trigger: GCGAACTTCTTTCAAGCATCACCAGCTCCGGACCAT...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTATGGTCCGGAGCTGGTaGTGCTTGAAAGAAGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSKRRETCQWDTCLGWFCMVRSW*CLKEVR Trigger: GCGAACTTCTTTCAAGCATCACCAGCTCCGGACCAT...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCTTTGAGCAAGCTGTTTaGGGTCCTTGGCATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSFEQAV*GPWHLG Trigger: ACCCAGATGCCAAGGACCTCAAACAGCTTGCTCAAA...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCTTCAGGCACCTAAGATaGCACTGTTTGTCTACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSFRHLR*HCLSTA Trigger: GGCCGTAGACAAACAGTGGCATCTTAGGTGCCTGAA...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGGAGGGTCTCGAAGTGTaGGCGGCAGTACACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DTFGLYFTAMVLDKCVELEGLEV*AAVHQA Trigger: AGCCTGGTGTACTGCCGCGCACACTTCGAGACCCTC...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATGAGGGTCTCGAAGTGTaGGCGGCAGTACACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYEGLEV*AAVHQA Trigger: AGCCTGGTGTACTGCCGCGCACACTTCGAGACCCTC...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR GCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTCCGGTCCAAGTGGTCTaGCTCGTTCTCATTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: QSKRRETCQWDTCLGWFCPVQVV*LVLITT Trigger: GGTTGTAATGAGAACGAGGCAGACCACTTGGACCGG...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGGCGGAAATGCCAAGGTaGCAGCGGGCACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTFGLYFTAMVLDKCVELAEMPR*QRAHLC Trigger: GCAGAGATGTGCCCGCTGCCACCTTGGCATTTCCGC...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAAGCGGAAATGCCAAGGTaGCAGCGGGCACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEAEMPR*QRAHLC Trigger: GCAGAGATGTGCCCGCTGCCACCTTGGCATTTCCGC...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACATTCCGTGGAAGAGCATaGCTGCCTCTAGAGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTFRGRA*LPLEWC Trigger: GCACCACTCTAGAGGCAGCCATGCTCTTCCACGGAA...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | CGTTCTGGGAGACTGTTAGGAAGTTGGCACCTGTCCTaGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSGRLLGSWHLS*ELFLPLFSIQE Trigger: TTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGTGCCAACTTCCTAACAGTCTCCCAGAACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGCCTTGGCAAAGCAGGTaGGCTCAGATTCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQPWQSR*AQIPEP Trigger: TGGCTCTGGAATCTGAGCTCACCTGCTTTGCCAAGG...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTGGAGCTGGTGATGCTTaGAAGAAGTTCGCATCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSKRRETCQWDTCLGWFCGAGDA*KKFASV Trigger: AACGGATGCGAACTTCTTTCAAGCATCACCAGCTCC...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCTTCAGGCACCTAAGATaGCACTGTTTGTCTACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CIPAYILFRDFLEHHAQFFRHLR*HCLSTA Trigger: GGCCGTAGACAAACAGTGGCATCTTAGGTGCCTGAA...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTGGTGGATATTCCCCTTaGAAGAGGGTCTCGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSKRRETCQWDTCLGWFCGGYSP*KRVSKC Trigger: ACACTTCGAGACCCTCTTGCAAGGGGAATATCCACC...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAAGGGCCGGAAGCGACGTaGCGTCAGCTTTATCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEGPEAT*RQLYQH Trigger: GTGTTGATAAAGCTGACGGCACGTCGCTTCCGGCCC...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGGACGGGCCTCAGTCTTaGATCTGCGCTCCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTFGLYFTAMVLDKCVELDGPQS*ICAPSP Trigger: AGGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTC...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATGACGGGCCTCAGTCTTaGATCTGCGCTCCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYDGPQS*ICAPSP Trigger: AGGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTC...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCGTAGCTCAGCTGAGGTaGATATTCCCCTTGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CIPAYILFRDFLEHHAQFVAQLR*IFPLQE Trigger: CTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTAC...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTGGTCCCGGTCCAAGTaGTCTGCCTCGTTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: IVSLLTFYSGISLSIMHSWSRSK*SASFSL Trigger: TAATGAGAACGAGGCAGACCACTTGGACCGGGACCA...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATCCTCCGGAGATTCCGTaGAAGAGCATGGCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYPPEIP*KSMAAS Trigger: AGAGGCAGCCATGCTCTTCCACGGAATCTCCGGAGG...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATGGGCTTCCGGGTTCGTaGCTGTCCATGTTAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYGLPGS*LSMLEV Trigger: GACCTCTAACATGGACAGCCACGAACCCGGAAGCCC...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGGCTCCATCTCCTCCATaGTACCTTGGATGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DTFGLYFTAMVLDKCVELAPSPP*YLGCGL Trigger: GAGGCCACATCCAAGGTATCATGGAGGAGATGGAGC...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAACCTTGGCAAAGCAGGTaGGCTCAGATTCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEPWQSR*AQIPEP Trigger: TGGCTCTGGAATCTGAGCTCACCTGCTTTGCCAAGG...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGCCTTGGCAAAGCAGGTaGGCTCAGATTCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTFGLYFTAMVLDKCVELPWQSR*AQIPEP Trigger: TGGCTCTGGAATCTGAGCTCACCTGCTTTGCCAAGG...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATCGGTGCCAGTGCCATTaGAGTAAGGCAAAGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYRCQCH*SKAKPS Trigger: GCTTGGCTTTGCCTTACTTCAATGGCACTGGCACCG...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | ATATTACTGCCAGCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTTGTTACGGTGCCAGTGCCATTaGAGTAAGGCAAAGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLPACSGLDMVYLALLLRCQCH*SKAKPS Trigger: GCTTGGCTTTGCCTTACTTCAATGGCACTGGCACCG...TAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACATTCAGGCACCTAAGATaGCACTGTTTGTCTACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTFRHLR*HCLSTA Trigger: GGCCGTAGACAAACAGTGGCATCTTAGGTGCCTGAA...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTCCTCCTTGCAGTAAATaGTACCGTCCTTGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCPPCSK*YRPWQS Trigger: GCTTTGCCAAGGACGGTAGCATTTACTGCAAGGAGG...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTGGTGGATATTCCCCTTaGAAGAGGGTCTCGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IVSLLTFYSGISLSIMHSGGYSP*KRVSKC Trigger: ACACTTCGAGACCCTCTTGCAAGGGGAATATCCACC...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTCCGGTCCAAGTGGTCTaGCTCGTTCTCATTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: IQTFPICTVSKKMQHYFFPVQVV*LVLITT Trigger: GGTTGTAATGAGAACGAGGCAGACCACTTGGACCGG...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTTCCTCCATGATACCTTaGATGTGGCCTCCGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCSSMIP*MWPPEI Trigger: AATCTCCGGAGGCCACATCCAAGGTATCATGGAGGA...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAGTAGCTCAGCTGAGGTaGATATTCCCCTTGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTVAQLR*IFPLQE Trigger: CTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTAC...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGTGGTCCCGGTCCAAGTaGTCTGCCTCGTTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQWSRSK*SASFSL Trigger: TAATGAGAACGAGGCAGACCACTTGGACCGGGACCA...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTTGGTCCCGGTCCAAGTaGTCTGCCTCGTTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: IQTFPICTVSKKMQHYFFWSRSK*SASFSL Trigger: TAATGAGAACGAGGCAGACCACTTGGACCGGGACCA...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | ATATTACTGCCAGCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTTGTTATTCCGTGGAAGAGCATaGCTGCCTCTAGAGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLPACSGLDMVYLALLLFRGRA*LPLEWC Trigger: GCACCACTCTAGAGGCAGCCATGCTCTTCCACGGAA...TAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATTCAGGTCTGTTAAAGTaGTCGCAGTGCCGGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYSGLLK*SQCRVE Trigger: CTCCACCCGGCACTGCGACCACTTTAACAGACCTGA...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAGCTCCATCTCCTCCATaGTACCTTGGATGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKAPSPP*YLGCGL Trigger: GAGGCCACATCCAAGGTATCATGGAGGAGATGGAGC...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGCCGTTTGGTCTTCTGTaGAGGTGGATAAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTFGLYFTAMVLDKCVELPFGLL*RWIRLL Trigger: CAGCAGCCTTATCCACCTTCACAGAAGACCAAACGG...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATCCGTTTGGTCTTCTGTaGAGGTGGATAAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYPFGLL*RWIRLL Trigger: CAGCAGCCTTATCCACCTTCACAGAAGACCAAACGG...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | ATATTACTGCCAGCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTTGTTACCGTTTGGTCTTCTGTaGAGGTGGATAAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLPACSGLDMVYLALLLPFGLL*RWIRLL Trigger: CAGCAGCCTTATCCACCTTCACAGAAGACCAAACGG...TAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATATGGTCCGGAGCTGGTaGTGCTTGAAAGAAGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYMVRSW*CLKEVR Trigger: GCGAACTTCTTTCAAGCATCACCAGCTCCGGACCAT...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGTTTGAGCAAGCTGTTTaGGGTCCTTGGCATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQFEQAV*GPWHLG Trigger: ACCCAGATGCCAAGGACCTCAAACAGCTTGCTCAAA...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTGGTGGATATTCCCCTTaGAAGAGGGTCTCGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTDLPYMHGVQENATLLLGGYSP*KRVSKC Trigger: ACACTTCGAGACCCTCTTGCAAGGGGAATATCCACC...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR GCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAACCGGTCCAAGTGGTCTaGCTCGTTCTCATTACAACC | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEPVQVV*LVLITT Trigger: GGTTGTAATGAGAACGAGGCAGACCACTTGGACCGG...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR GCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAAACACCCCCATTCTCCTaGCGCAAAAGGTTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKETPPFS*RKRFLL Trigger: CAGAAGGAACCTTTTGCGGCAGGAGAATGGGGGTGT...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGGTAGCTCAGCTGAGGTaGATATTCCCCTTGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQVAQLR*IFPLQE Trigger: CTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTAC...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAATTCCGTGGAAGAGCATaGCTGCCTCTAGAGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKFRGRA*LPLEWC Trigger: GCACCACTCTAGAGGCAGCCATGCTCTTCCACGGAA...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR CAA 72 bp | GCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTaGTTAAACCACACGAGGCTAAGCCCTCATTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACSGLDMVYLAL*LNHTRLSPHLC Trigger: ACACAAATGAGGGCTTAGCCTCGTGTGGTTTAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | TTTCTCCAAATGTGGGGAGGGCATATTACTGCCAGCTaGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLQMWGGHITAS*LWFRYGLSRSF Trigger: AAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATATGCCCTCCCCACATTTGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | GCTCTTCTTTCCCATTGGTCCCTTGTTTCTGATGCCTaGTGCACCCTGAACTATACAAAGAACAAAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLSHWSLVSDA*CTLNYTKNKMS Trigger: TGACATTTTGTTCTTTGTATAGTTCAGGGTGCACAAGGCATCAGAAACAAGGGACCAATGGGAAAGAAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | GGAAGTTGGCACCTGTCCTTGGAACTTTTTCTCCCCTaGTTTAGCATTCAGGAAATCAAAGTGTTTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSWHLSLELFLP*FSIQEIKVFGK Trigger: TTTCCCAAACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGTGCCAACTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | AGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTaGTTACTGTTCACAGAGAAATGTATCGAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNLPMGYMFGVV*LLFTEKCIEQE Trigger: CTCCTGCTCGATACATTTCTCTGTGAACAGTAACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATGGAGCTGGTGATGCTTaGAAGAAGTTCGCATCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYGAGDA*KKFASV Trigger: AACGGATGCGAACTTCTTTCAAGCATCACCAGCTCC...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAATTTGAGCAAGCTGTTTaGGGTCCTTGGCATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEFEQAV*GPWHLG Trigger: ACCCAGATGCCAAGGACCTCAAACAGCTTGCTCAAA...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR GCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAAGGTGGATATTCCCCTTaGAAGAGGGTCTCGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEGGYSP*KRVSKC Trigger: ACACTTCGAGACCCTCTTGCAAGGGGAATATCCACC...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATTCCTCCATGATACCTTaGATGTGGCCTCCGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYSSMIP*MWPPEI Trigger: AATCTCCGGAGGCCACATCCAAGGTATCATGGAGGA...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGTCCTCCATGATACCTTaGATGTGGCCTCCGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: DTFGLYFTAMVLDKCVELSSMIP*MWPPEI Trigger: AATCTCCGGAGGCCACATCCAAGGTATCATGGAGGA...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAAGTAGCTCAGCTGAGGTaGATATTCCCCTTGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKEVAQLR*IFPLQE Trigger: CTCTTGCAAGGGGAATATCCACCTCAGCTGAGCTAC...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAATGGTCCCGGTCCAAGTaGTCTGCCTCGTTCTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKWSRSK*SASFSL Trigger: TAATGAGAACGAGGCAGACCACTTGGACCGGGACCA...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR CAA 72 bp | TCCAGAACCACGATTTCAACACTGACTGAAAATGTATaGGAAAAATCCATTCAGGTTGTTAGTGCCGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTTISTLTENV*EKSIQVVSAVG Trigger: TCCCACGGCACTAACAACCTGAATGGATTTTTCCAATACATTTTCAGTCAGTGTTGAAATCGTGGTTCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | TTTGTGTGCCTAGGATCAATTTGCCAGAAGTTAGACTaGTCTAGGCATTGGGGAGGTAGAAGCTATAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FVCLGSICQKLD*SRHWGGRSYKI Trigger: GATTTTATAGCTTCTACCTCCCCAATGCCTAGACAAGTCTAACTTCTGGCAAATTGATCCTAGGCACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | ACAGAGAAATGTATCGAGCAGGAGGGTGCTGTCTGGTaGAAACATCTATTTTGCAACACAGTTAACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEKCIEQEGAVW*KHLFCNTVNKE Trigger: TTCCTTGTTAACTGTGTTGCAAAATAGATGTTTCAACCAGACAGCACCCTCCTGCTCGATACATTTCTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCGTTCTCATTACAACCTaGGTTGTAATTCACGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: CIPAYILFRDFLEHHAQFVLITT*VVIHDV Trigger: GACATCGTGAATTACAACTCAGGTTGTAATGAGAAC...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAACAGTTGTCACTACAGTaGCAGTGGGATTGGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKQLSLQ*QWDWSG Trigger: ACCTGACCAATCCCACTGTCACTGTAGTGACAACTG...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR GCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAATTCAGGCACCTAAGATaGCACTGTTTGTCTACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKFRHLR*HCLSTA Trigger: GGCCGTAGACAAACAGTGGCATCTTAGGTGCCTGAA...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR CAA 72 bp | GTCCTCAGTCTTTCATGCCAAACAATAAATTTGCAGTaGCCCAGACTGAAGACTGCTGTACATGATAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLSLSCQTINLQ*PRLKTAVHDRK Trigger: TTTTCTATCATGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGACTGAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTaGGGAGGTCAAAAGTATAGAATTTCAAATTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVC*GGQKYRISNSK Trigger: CTTAGAATTTGAAATTCTATACTTTTGACCTCCCAAACACACACACACACACACACACACACACACACACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR TCA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTGTTCTCATTACAACCTaGGTTGTAATTCACGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQTFPICTVSKKMQHYFFVLITT*VVIHDV Trigger: GACATCGTGAATTACAACTCAGGTTGTAATGAGAAC...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGGTTCTCATTACAACCTaGGTTGTAATTCACGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQVLITT*VVIHDV Trigger: GACATCGTGAATTACAACTCAGGTTGTAATGAGAAC...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAGCAAAAGGTTCCTTCTaGATTTGGCTCGTGCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKAKGSF*IWLVRF Trigger: AAAACGCACGAGCCAAATTCAGAAGGAACCTTTTGC...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CCA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAATTGGCTCGTGCGTTTTaGAACCAAACCTGTAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: DEHSPLPRPLRFHLKLKELARAF*NQTCKT Trigger: AGTTTTACAGGTTTGGTTCCAAAACGCACGAGCCAA...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| 3UTR CAA 72 bp | CTGATACACATTAGCAAGCAGATGAAGTGGATACTTTaGGACTTTACTTTACAGCTATGGTGCTCGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIHISKQMKWIL*DFTLQLWCSIN Trigger: ATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATCCACTTCATCTGCTTGCTAATGTGTATCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| 3UTR CAA 72 bp | GTGCTTTGGTTTCTCTGTTACGAAGTTTTGCCCTATTaGAAGTATCAAAAGCCTACCTACTATGTAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLWFLCYEVLPY*KYQKPTYYVSQ Trigger: TTGACTTACATAGTAGGTAGGCTTTTGATACTTCAAATAGGGCAAAACTTCGTAACAGAGAAACCAAAGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR TCA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAGTTCTCATTACAACCTaGGTTGTAATTCACGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKVLITT*VVIHDV Trigger: GACATCGTGAATTACAACTCAGGTTGTAATGAGAAC...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS TCA 90 bp | TGGGATTGGTCAGGTCTGTTAAAGTGGTCGCAGTGCCGGGTGGAGTaGGAGCGCCGCTGTCTGCTGAGGGCGGGGCCGGAAGCGACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WDWSGLLKWSQCRVE*ERRCLLRAGPEATC Trigger: GCACGTCGCTTCCGGCCCCGCCCTCAGCAGACAGCGGCGCTCTCACTCCACCCGGCACTGCGACCACTTTAACAGACCTGACCAATCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
||
| CDS-3UTR CAA 90 bp | GGTGGATATTCCCCTTGCAAGAGGGTCTCGAAGTGTGCGCGGCAGTACACCAGGAGACGGGCCTCAGTCTaGGATCTGCGCTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGYSPCKRVSKCARQYTRRRASV*DLRSIS Trigger: GGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTCT...CCTGGTGTACTGCCGCGCACACTTCGAGACCCTCTTGCAAGGGGAATATCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS CCA 90 bp | TCAGTCTTGGATCTGCGCTCCATCTCCTCCATGATACCTTGGATGTaGCCTCCGGAGATTCCGTGGAAGAGCATGGCTGCCTCTAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVLDLRSISSMIPWM*PPEIPWKSMAASRV Trigger: CACTCTAGAGGCAGCCATGCTCTTCCACGGAATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAGATGGAGCGCAGATCCAAGACTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046870.13 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | CATTACAACCTGAGTTGTAATTCACGATGTCCACTCCCAGAGCTGGGCTCTTCCCGGAAAGGACACGAATaGTTTTCGGCTCGGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: HYNLSCNSRCPLPELGSSRKGHE*FSARHP Trigger: GGGGTGCCGAGCCGAAAACAATTCGTGTCCTTTCCG...GGAAGAGCCCAGCTCTGGGAGTGGACATCGTGAATTACAACTCAGGTTGTAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCCTTAAAGGCCTACAATGATAGAAGGCTGTGGTTTTGTCCCAGCACTTCCAGACGGGCCTCAGTCTaGGATCTGCGCTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISLKAYNDRRLWFCPSTSRRASV*DLRSIS Trigger: GGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTCT...GGAAGTGCTGGGACAAAACCACAGCCTTCTATCATTGTAGGCCTTTAAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTAGACGGGCCTCAGTCTaGGATCTGCGCTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IVSLLTFYSGISLSIMHSRRASV*DLRSIS Trigger: GGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTCT...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTAGACGGGCCTCAGTCTaGGATCTGCGCTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCRRASV*DLRSIS Trigger: GGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTCT...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACACGGAAAGGACACGAATaGTTTTCGGCTCGGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTRKGHE*FSARHP Trigger: GGGGTGCCGAGCCGAAAACAATTCGTGTCCTTTCCG...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019374.14 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTCTCCTCCATGATACCTaGGATGTGGCCTCCGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCLLHDT*DVASGD Trigger: ATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAG...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTCCCGTGGTCAAGGTCTaGTTGCAAGTGGAACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSKRRETCQWDTCLGWFCPVVKV*LQVEQV Trigger: CACTTGTTCCACTTGCAACAAGACCTTGACCACGGG...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTAGGTGGATATTCCCCTaGCAAGAGGGTCTCGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSKRRETCQWDTCLGWFCRWIFP*QEGLEV Trigger: CACTTCGAGACCCTCTTGCAAGGGGAATATCCACCT...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | AATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTCTCCTCCATGATACCTaGGATGTGGCCTCCGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NTDLPYMHGVQENATLLLLLHDT*DVASGD Trigger: ATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAG...AAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAAGACGGGCCTCAGTCTaGGATCTGCGCTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKRRASV*DLRSIS Trigger: GGAGATGGAGCGCAGATCCAAGACTGAGGCCCGTCT...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTAGGTGGATATTCCCCTaGCAAGAGGGTCTCGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCRWIFP*QEGLEV Trigger: CACTTCGAGACCCTCTTGCAAGGGGAATATCCACCT...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | ATTGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTAGGTGGATATTCCCCTaGCAAGAGGGTCTCGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IVSLLTFYSGISLSIMHSRWIFP*QEGLEV Trigger: CACTTCGAGACCCTCTTGCAAGGGGAATATCCACCT...ACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | CAGTCTAAGAGAAGAGAAACTTGCCAATGGGATACATGTTTGGGGTGGTTTTGTCAAACGTCGGGATGTTaGGCTGTAATGCCCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSKRRETCQWDTCLGWFCQTSGC*AVMPQD Trigger: ATCTTGGGGCATTACAGCCAAACATCCCGACGTTTG...ACAAAACCACCCCAAACATGTATCCCATTGGCAAGTTTCTCTTCTCTTAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | TGTATCCCTGCTTACATTCTATTCAGGGATTTCCTTGAGCATCATGCACAGTTCCAAACGTCGGGATGTTaGGCTGTAATGCCCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CIPAYILFRDFLEHHAQFQTSGC*AVMPQD Trigger: ATCTTGGGGCATTACAGCCAAACATCCCGACGTTTG...GAACTGTGCATGATGCTCAAGGAAATCCCTGAATAGAATGTAAGCAGGGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGCCCGTGGTCAAGGTCTaGTTGCAAGTGGAACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQPVVKV*LQVEQV Trigger: CACTTGTTCCACTTGCAACAAGACCTTGACCACGGG...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTCATGCCAAACAATAAATTTGCAGTTGCCCAGACTGAAGACTGCTGTACAGGTCAGGCCTGTTTTTaGAGCAAGCTGTTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFMPNNKFAVAQTEDCCTGQACF*SKLFEV Trigger: GACCTCAAACAGCTTGCTCAAAAAACAGGCCTGACC...TGTACAGCAGTCTTCAGTCTGGGCAACTGCAAATTTATTGTTTGGCATGAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCCTTGGAACTTTTTCTCCCCTTGTTTAGCATTCAGGAAATCAAAGTGTGGTCAGGCCTGTTTTTaGAGCAAGCTGTTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCPWNFFSPCLAFRKSKCGQACF*SKLFEV Trigger: GACCTCAAACAGCTTGCTCAAAAAACAGGCCTGACC...ACACTTTGATTTCCTGAATGCTAAACAAGGGGAGAAAAAGTTCCAAGGACAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAACTCCTCCATGATACCTaGGATGTGGCCTCCGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKLLHDT*DVASGD Trigger: ATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAG...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CAA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGCCCGTGGTCAAGGTCTaGTTGCAAGTGGAACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DTFGLYFTAMVLDKCVELPVVKV*LQVEQV Trigger: CACTTGTTCCACTTGCAACAAGACCTTGACCACGGG...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | GATGAACATTCACCACTGCCCAGACCATTAAGATTTCACCTCAAATTAAAAGAAAGGTGGATATTCCCCTaGCAAGAGGGTCTCGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DEHSPLPRPLRFHLKLKERWIFP*QEGLEV Trigger: CACTTCGAGACCCTCTTGCAAGGGGAATATCCACCT...TTCTTTTAATTTGAGGTGAAATCTTAATGGTCTGGGCAGTGGTGAATGTTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CAA 90 bp | ATACAGACCTTCCCTATATGCACGGTGTCCAAGAAAATGCAACATTACTTCTTTAGCTGTTTGAGGTCCTaGGCATCTGGGTTATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IQTFPICTVSKKMQHYFFSCLRS*ASGLWL Trigger: CAACCATAACCCAGATGCCAAGGACCTCAAACAGCT...AAAGAAGTAATGTTGCATTTTCTTGGACACCGTGCATATAGGGAAGGTCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | ATGCTACCTTATGTGTGGCTAATAAAAGAGGCTTTCACTCTGAAAACTGTACAGCAAACGTCGGGATGTTaGGCTGTAATGCCCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: MLPYVWLIKEAFTLKTVQQTSGC*AVMPQD Trigger: ATCTTGGGGCATTACAGCCAAACATCCCGACGTTTG...CTGTACAGTTTTCAGAGTGAAAGCCTCTTTTATTAGCCACACATAAGGTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAACCCGTGGTCAAGGTCTaGTTGCAAGTGGAACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKPVVKV*LQVEQV Trigger: CACTTGTTCCACTTGCAACAAGACCTTGACCACGGG...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CAA 90 bp | GATACTTTTGGACTTTACTTTACAGCTATGGTGCTCGATAAATGTGTGGAATTGAGCTGTTTGAGGTCCTaGGCATCTGGGTTATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DTFGLYFTAMVLDKCVELSCLRS*ASGLWL Trigger: CAACCATAACCCAGATGCCAAGGACCTCAAACAGCT...CAATTCCACACATTTATCGAGCACCATAGCTGTAAAGTAAAGTCCAAAAGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATGGTCAGGCCTGTTTTTaGAGCAAGCTGTTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYGQACF*SKLFEV Trigger: GACCTCAAACAGCTTGCTCAAAAAACAGGCCTGACC...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CAA 90 bp | ATATTACTGCCAGCTTGCTCTGGTTTAGATATGGTTTATCTCGCTCTTTTGTTAGGTCAGGCCTGTTTTTaGAGCAAGCTGTTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLPACSGLDMVYLALLLGQACF*SKLFEV Trigger: GACCTCAAACAGCTTGCTCAAAAAACAGGCCTGACC...TAACAAAAGAGCGAGATAAACCATATCTAAACCAGAGCAAGCTGGCAGTAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000093486.10 ENSMUST00000112030.9 |
||
| CDS-3UTR CAA 90 bp | AGATTGTTTGGTCTGGTTAGTGGTAAATGCCCAAAATGTAAGAGAAATACGAAAAGCTGTTTGAGGTCCTaGGCATCTGGGTTATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLFGLVSGKCPKCKRNTKSCLRS*ASGLWL Trigger: CAACCATAACCCAGATGCCAAGGACCTCAAACAGCT...TTTCGTATTTCTCTTACATTTTGGGCATTTACCACTAACCAGACCAAACAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CAA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATAGGTTCCTTCTGAATTaGGCTCGTGCGTTTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYRFLLN*ARAFWN Trigger: GTTCCAAAACGCACGAGCCAAATTCAGAAGGAACCT...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS-3UTR CAA 90 bp | TGTCGATATGTAACCACACATTTATACAGCCAGAAGGGCACCTTTAAAATCTATACAGTGACAGTGGGATaGGTCAGGTCTGTTAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CRYVTTHLYSQKGTFKIYTVTVG*VRSVKV Trigger: CACTTTAACAGACCTGACCAATCCCACTGTCACTGT...ATAGATTTTAAAGGTGCCCTTCTGGCTGTATAAATGTGTGGTTACATATCGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046870.13 |
||
| CDS TCA 72 bp | CGCAGTGCCGGGTGGAGTGAGAGCGCCGCTGTCTGCTaGGGGCGGGGCCGGAAGCGACGTGCCGTCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSAGWSESAAVC*GRGRKRRAVSF Trigger: AAAGCTGACGGCACGTCGCTTCCGGCCCCGCCCTCAGCAGACAGCGGCGCTCTCACTCCACCCGGCACTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
||
| CDS GCA 72 bp | CGCCGCTGTCTGCTGAGGGCGGGGCCGGAAGCGACGTaGCGTCAGCTTTATCAACACCCCCATTCTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRCLLRAGPEAT*RQLYQHPHSPA Trigger: GGCAGGAGAATGGGGGTGTTGATAAAGCTGACGGCACGTCGCTTCCGGCCCCGCCCTCAGCAGACAGCGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
||
| CDS TCA 72 bp | TCAGGTCTGTTAAAGTGGTCGCAGTGCCGGGTGGAGTaGGAGCGCCGCTGTCTGCTGAGGGCGGGGCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SGLLKWSQCRVE*ERRCLLRAGPE Trigger: TTCCGGCCCCGCCCTCAGCAGACAGCGGCGCTCTCACTCCACCCGGCACTGCGACCACTTTAACAGACCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
||
| CDS TCA 72 bp | CTGAGAGGGGGCATACCCGCGTCGCGGCCGTTGAGCTaGGTGCCTTTGGTCAGACGGGCCTCAGTCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LRGGIPASRPLS*VPLVRRASVLD Trigger: ATCCAAGACTGAGGCCCGTCTGACCAAAGGCACTCAGCTCAACGGCCGCGACGCGGGTATGCCCCCTCTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019374.14 ENSMUST00000046870.13 ENSMUST00000093486.10 ENSMUST00000112026.4 ENSMUST00000112030.9 |
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| CDS CAA 90 bp | ACGGGCCTCAGTCTTGGATCTGCGCTCCATCTCCTCCATGATACCTaGGATGTGGCCTCCGGAGATTCCGTGGAAGAGCATGGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGLSLGSALHLLHDT*DVASGDSVEEHGWG Trigger: CCCCCAGCCATGCTCTTCCACGGAATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAGATGGAGCGCAGATCCAAGACTGAGGCCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000112026.4 ENSMUST00000194557.2 |
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| CDS TCA 72 bp | AGCAGCTCAGATGGTAGACAGAGTCTCGGGCGCGCATaGCCATCTCAGAGGCGGAAATGCCAAGGTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSDGRQSLGRA*PSQRRKCQGGS Trigger: GCTGCCACCTTGGCATTTCCGCCTCTGAGATGGTCATGCGCGCCCGAGACTCTGTCTACCATCTGAGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019374.14 ENSMUST00000046870.13 ENSMUST00000093486.10 ENSMUST00000112026.4 ENSMUST00000112030.9 |
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| CDS TCA 72 bp | TCTGCACAGAGAACCTTCGCGTCGCGGCCGTTGAGCTaGGTGCCTTTGGTCAGACGGGCCTCAGTCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SAQRTFASRPLS*VPLVRRASVLD Trigger: ATCCAAGACTGAGGCCCGTCTGACCAAAGGCACTCAGCTCAACGGCCGCGACGCGAAGGTTCTCTGTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
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| CDS TCA 72 bp | ACATCTCTGCACAGAGAACCTTCGCGTCGCGGCCGTTaGGCTGAGTGCCTTTGGTCAGACGGGCCTCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: TSLHREPSRRGR*AECLWSDGPQS Trigger: AGACTGAGGCCCGTCTGACCAAAGGCACTCAGCTCAACGGCCGCGACGCGAAGGTTCTCTGTGCAGAGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194557.2 |
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| CDS CCA 72 bp | GATGTGGCCTCCGGAGATTCCGTGGAAGAGCATGGCTaGGGGGCGGAAAGGACACGAATTGTTTTCGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: DVASGDSVEEHG*GAERTRIVFGS Trigger: CGAGCCGAAAACAATTCGTGTCCTTTCCGCCCCCCAGCCATGCTCTTCCACGGAATCTCCGGAGGCCACATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000112026.4 ENSMUST00000194557.2 |
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| CDS CAA 90 bp | ACGGGCCTCAGTCTTGGATCTGCGCTCCATCTCCTCCATGATACCTaGGATGTGGCCTCCGGAGATTCCGTGGAAGAGCATGGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: TGLSLGSALHLLHDT*DVASGDSVEEHGCL Trigger: GAGGCAGCCATGCTCTTCCACGGAATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAGATGGAGCGCAGATCCAAGACTGAGGCCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046870.13 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| CDS CCA 72 bp | GATCTGCGCTCCATCTCCTCCATGATACCTTGGATGTaGCCTCCGGAGATTCCGTGGAAGAGCATGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DLRSISSMIPWM*PPEIPWKSMAG Trigger: CCCAGCCATGCTCTTCCACGGAATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAGATGGAGCGCAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019374.14 ENSMUST00000112026.4 ENSMUST00000194557.2 |
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| CDS CCA 72 bp | GATCTGCGCTCCATCTCCTCCATGATACCTTGGATGTaGCCTCCGGAGATTCCGTGGAAGAGCATGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DLRSISSMIPWM*PPEIPWKSMAA Trigger: GGCAGCCATGCTCTTCCACGGAATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAGATGGAGCGCAGATC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046870.13 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| CDS CCA 72 bp | TCCATGATACCTTGGATGTGGCCTCCGGAGATTCCGTaGAAGAGCATGGCTGCCTCTAGAGTGGTGCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: SMIPWMWPPEIP*KSMAASRVVPF Trigger: GAACGGCACCACTCTAGAGGCAGCCATGCTCTTCCACGGAATCTCCGGAGGCCACATCCAAGGTATCATGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046870.13 ENSMUST00000093486.10 ENSMUST00000112030.9 |
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| CDS GCA 72 bp | GACGTGCCGTCAGCTTTATCAACACCCCCATTCTCCTaGCGCAAAAGGTTCCTTCTGAATTTGGCTCGTGCG | + |
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Preference number: 6 (lower is better) Translates to: DVPSALSTPPFS*RKRFLLNLARA Trigger: CGCACGAGCCAAATTCAGAAGGAACCTTTTGCGGCAGGAGAATGGGGGTGTTGATAAAGCTGACGGCACGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
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| CDS CAA 72 bp | AGTCTTGGATCTGCGCTCCATCTCCTCCATGATACCTaGGATGTGGCCTCCGGAGATTCCGTGGAAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SLGSALHLLHDT*DVASGDSVEEH Trigger: ATGCTCTTCCACGGAATCTCCGGAGGCCACATCCAAGGTATCATGGAGGAGATGGAGCGCAGATCCAAGACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019374.14 ENSMUST00000046870.13 ENSMUST00000093486.10 ENSMUST00000112026.4 ENSMUST00000112030.9 ENSMUST00000194557.2 |
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| CDS CAA 90 bp | CTGTCCATGTTAGAGGTCACAGTTGTCACTACAGTGACAGTGGGATaGGTCAGGTCTGTTAAAGTGGTCGCAGTGCCGGGTGGAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LSMLEVTVVTTVTVG*VRSVKVVAVPGGVR Trigger: TCTCACTCCACCCGGCACTGCGACCACTTTAACAGACCTGACCAATCCCACTGTCACTGTAGTGACAACTGTGACCTCTAACATGGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
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| CDS CAA 72 bp | TTAGAGGTCACAGTTGTCACTACAGTGACAGTGGGATaGGTCAGGTCTGTTAAAGTGGTCGCAGTGCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LEVTVVTTVTVG*VRSVKVVAVPG Trigger: ACCCGGCACTGCGACCACTTTAACAGACCTGACCAATCCCACTGTCACTGTAGTGACAACTGTGACCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
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| CDS CCA 72 bp | TTCGTTAAGGTAGTTTGTGAGGGGCTTCCGGGTTCGTaGCTGTCCATGTTAGAGGTCACAGTTGTCACTACA | + |
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Preference number: 6 (lower is better) Translates to: FVKVVCEGLPGS*LSMLEVTVVTT Trigger: TGTAGTGACAACTGTGACCTCTAACATGGACAGCCACGAACCCGGAAGCCCCTCACAAACTACCTTAACGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046870.13 ENSMUST00000112026.4 |
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