Pregenerated sensors for LHX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026468Ensembl transcript IDs: ENSMUST00000027740.14, ENSMUST00000195275.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGCCAAGGTGGCCTGTCACAGTCACCTTGTGCTGTCCAAGCACTaGGCAGCCAAAGCCTCTAAGCAGGGCGGGAGGGGAGGGAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: KAKVACHSHLVLSKH*AAKASKQGGRGGSQ Trigger: TTGGCTCCCTCCCCTCCCGCCCTGCTTAGAGGCTTTGGCTGCTCAGTGCTTGGACAGCACAAGGTGACTGTGACAGGCCACCTTGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR TCA 90 bp | CAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTCAGGTaGACACGGTCCTCACACAGTCACACCCCAGTGATCCCTGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: QSSIWGPAALNLLLR*TRSSHSHTPVIPAC Trigger: ACAGGCAGGGATCACTGGGGTGTGACTGTGTGAGGACCGTGTTCACCTGAGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR GCA 90 bp | GAGTGGAGGTGGCCTGGCTCTGTCCACCTGCGTTCTGCCTCACTATaGAAAGGAATGAAGGAAGGCTTGGCACCCCTCCCAAACCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: EWRWPGSVHLRSASL*KGMKEGLAPLPNLQ Trigger: CTGCAGGTTTGGGAGGGGTGCCAAGCCTTCCTTCATTCCTTTGCATAGTGAGGCAGAACGCAGGTGGACAGAGCCAGGCCACCTCCACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CCA 90 bp | GGTGCCTCCCCCACGGGAATCCTGGTTCTGGTGAGAGGGATGATTTaGGAGACCAAGTGTGAGATGCACCAGCTGGAGCAGAGTCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: GASPTGILVLVRGMI*ETKCEMHQLEQSPQ Trigger: TTGGGGACTCTGCTCCAGCTGGTGCATCTCACACTTGGTCTCCCAAATCATCCCTCTCACCAGAACCAGGATTCCCGTGGGGGAGGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CCA 90 bp | GTGATCCCTGCCTGTAGGCGACATCAGGCGGGAGTGGAGGTGGCCTaGCTCTGTCCACCTGCGTTCTGCCTCACTATGCAAAGGAATGAA | + |
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Preference number: 1 (lower is better) Translates to: VIPACRRHQAGVEVA*LCPPAFCLTMQRNE Trigger: TTCATTCCTTTGCATAGTGAGGCAGAACGCAGGTGGACAGAGCCAGGCCACCTCCACTCCCGCCTGATGTCGCCTACAGGCAGGGATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR TCA 90 bp | GGGAATCCTGGTTCTGGTGAGAGGGATGATTTGGGAGACCAAGTGTaGGATGCACCAGCTGGAGCAGAGTCCCCAAAGGCCAAGGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: GNPGSGERDDLGDQV*DAPAGAESPKAKVA Trigger: GGCCACCTTGGCCTTTGGGGACTCTGCTCCAGCTGGTGCATCTCACACTTGGTCTCCCAAATCATCCCTCTCACCAGAACCAGGATTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CCA 90 bp | AAGTGTGAGATGCACCAGCTGGAGCAGAGTCCCCAAAGGCCAAGGTaGCCTGTCACAGTCACCTTGTGCTGTCCAAGCACTGAGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: KCEMHQLEQSPQRPR*PVTVTLCCPSTEQP Trigger: TGGCTGCTCAGTGCTTGGACAGCACAAGGTGACTGTGACAGGCCACCTTGGCCTTTGGGGACTCTGCTCCAGCTGGTGCATCTCACACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR GCA 90 bp | CCTGATGGCCAGAAGTGGGCCACACCAGTGACAGTTGCCACTACTTaGATCTCTGTCACCAGAGGGGCAAGCCTTGGTGACAGACTGAGA | + |
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Preference number: 1 (lower is better) Translates to: PDGQKWATPVTVATT*ISVTRGASLGDRLR Trigger: TCTCAGTCTGTCACCAAGGCTTGCCCCTCTGGTGACAGAGATGCAAGTAGTGGCAACTGTCACTGGTGTGGCCCACTTCTGGCCATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR GCA 90 bp | GGGCTAGCCAGAGAGCTAGGGCTTTCTAAGTGCAGGGCTAGAGCCTaGAGCATGGCAGGAGTCCAACCAGAGAGCTCAGTTATTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: GLARELGLSKCRARA*SMAGVQPESSVILP Trigger: TGGAAGAATAACTGAGCTCTCTGGTTGGACTCCTGCCATGCTGCAGGCTCTAGCCCTGCACTTAGAAAGCCCTAGCTCTCTGGCTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CCA 90 bp | CATCTTTGCTCCAAGACCAGGAGGGAAAGGCTACCAGAGGGTACCTaGTACCCTAGTGTAGACCGTCATAAGGTAGCGTCCCACTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: HLCSKTRRERLPEGT*YPSVDRHKVASHSP Trigger: TGGAGAGTGGGACGCTACCTTATGACGGTCTACACTAGGGTACCAGGTACCCTCTGGTAGCCTTTCCCTCCTGGTCTTGGAGCAAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CCA 90 bp | CTTGCAACTCATCAAAGCCAGCTCTCTGAGTACCATGGAGGCTCCTaGCTTCTTTCTGCCCTGTCACAATACCAAGAGGTTGGGGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: LATHQSQLSEYHGGS*LLSALSQYQEVGED Trigger: GTCTTCCCCAACCTCTTGGTATTGTGACAGGGCAGAAAGAAGCCAGGAGCCTCCATGGTACTCAGAGAGCTGGCTTTGATGAGTTGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CCA 90 bp | ACAAGCAGAGTGGGGATGGGATGGCTTTGCTGGGCTCTCTCTTTTTaGCTCCAGTCACTGGTAGAGCAGTTGGAACAACGACTGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: TSRVGMGWLCWALSF*LQSLVEQLEQRLKE Trigger: TTCTTTCAGTCGTTGTTCCAACTGCTCTACCAGTGACTGGAGCCAAAAAGAGAGAGCCCAGCAAAGCCATCCCATCCCCACTCTGCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR TCA 90 bp | AATTTGAACAGAACTTGCAGGGAGATCCACTTAAAATCTGAGCCCTaGTGTGGCTGTGCTTGTAAGTGGGTACCAGAGTGTGCTGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: NLNRTCREIHLKSEP*CGCACKWVPECAAL Trigger: GAGGGCAGCACACTCTGGTACCCACTTACAAGCACAGCCACATCAGGGCTCAGATTTTAAGTGGATCTCCCTGCAAGTTCTGTTCAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR TCA 90 bp | GGGCCCAACGCTATAAATGACTCTGTAAGGTCACACTTCATGTTTTaGAATCATCTTTGCTCCAAGACCAGGAGGGAAAGGCTACCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GPNAINDSVRSHFMF*NHLCSKTRRERLPE Trigger: CTCTGGTAGCCTTTCCCTCCTGGTCTTGGAGCAAAGATGATTTCAAAACATGAAGTGTGACCTTACAGAGTCATTTATAGCGTTGGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR TCA 90 bp | TTTTGGGGGATTCCATTGACTTGTGAATATCATCACGCACAGACATaGGATCTCAAGAAAGAAGTCTGGGTCTGCACTCTCCAAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: FWGIPLTCEYHHAQT*DLKKEVWVCTLQRK Trigger: TTTTCTTTGGAGAGTGCAGACCCAGACTTCTTTCTTGAGATCTCATGTCTGTGCGTGATGATATTCACAAGTCAATGGAATCCCCCAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | GGTCTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTGTGGTCTCCGCCTCCTaGGAATCGGCGGAGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: GLSVSSEQHLGSCSPEPAVVSAS*ESAEDF Trigger: GAAGTCCTCCGCCGATTCCCAGGAGGCGGAGACCAC...AGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTAGGGGCAAGCCTTGGTaGCAGACTGAGAGCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPRGKPW*QTESQA Trigger: AGCCTGGCTCTCAGTCTGTCACCAAGGCTTGCCCCT...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTAGAGCAGGACCCAGATaGCCCACTTTGCCCACTTTC | + |
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Preference number: 2 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCRAGPR*PTLPTF Trigger: GAAAGTGGGCAAAGTGGGCCATCTGGGTCCTGCTCT...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | GAACCTGCTCCTCAGGTGAACACGGTCCTCACACAGTCACACCCCAGTGATCCCCCCCAAAGGCCAAGGTaGCCTGTCACAGTCACCTTG | + |
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Preference number: 2 (lower is better) Translates to: EPAPQVNTVLTQSHPSDPPQRPR*PVTVTL Trigger: CAAGGTGACTGTGACAGGCCACCTTGGCCTTTGGGG...GGGATCACTGGGGTGTGACTGTGTGAGGACCGTGTTCACCTGAGGAGCAGGTTC 59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTCCAACATCACAGCGATaGCCACCAACTTCCTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCPTSQR*PPTSSR Trigger: TCTTGAGGAAGTTGGTGGGCATCGCTGTGATGTTGG...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTCCTGATGGCCAGAAGTaGGCCACACCAGTGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPPDGQK*ATPVTV Trigger: AACTGTCACTGGTGTGGCCCACTTCTGGCCATCAGG...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | GAACCTGCTCCTCAGGTGAACACGGTCCTCACACAGTCACACCCCAGTGATCCCAGAGTGGGGATGGGATaGCTTTGCTGGGCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: EPAPQVNTVLTQSHPSDPRVGMG*LCWALS Trigger: AGAGAGAGCCCAGCAAAGCCATCCCATCCCCACTCT...GGGATCACTGGGGTGTGACTGTGTGAGGACCGTGTTCACCTGAGGAGCAGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR TCA 90 bp | GCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGAGCTAACCGGTGCACTTCCTaGTGGCCAGAAGTGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AAHNVQRQPHETLTNGGANRCTS*WPEVGH Trigger: GTGGCCCACTTCTGGCCATCAGGAAGTGCACCGGTT...AGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTGATCCACTTAAAATCTaGGCCCTGATGTGGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPDPLKI*ALMWLC Trigger: GCACAGCCACATCAGGGCTCAGATTTTAAGTGGATC...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTCAGCAGCAAACAGAATaGAATGGGGTCCGGGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPQQQTE*NGVRVL Trigger: CAAAACCCGGACCCCATTCCATTCTGTTTGCTGCTG...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR TCA 90 bp | GGTCTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCAGAGCTAGCAGCATaGATCTGTGCTTTTAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GLSVSSEQHLGSCSPEPAPELAA*ICAFSV Trigger: CACACTAAAAGCACAGATTCATGCTGCTAGCTCTGG...AGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | TCCCAAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATGAATCTGTGCTTTTGCAGGGCTAGAGCCTaGAGCATGGCAGGAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SQTCSCLLTRASSMNLCFCRARA*SMAGVQ Trigger: TTGGACTCCTGCCATGCTGCAGGCTCTAGCCCTGCA...AAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | GGTCTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTTCTCAATACGGTCCCTaGTGTTCACCTCACACTGTA | + |
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Preference number: 2 (lower is better) Translates to: GLSVSSEQHLGSCSPEPASQYGP*CSPHTV Trigger: TACAGTGTGAGGTGAACACCAGGGACCGTATTGAGA...AGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTTACCCAGCCTGGCTCTaGGCCTGTGTGTTATCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RGAAHNVQRQPHETLTNGYPAWL*ACVLSA Trigger: AGCTGATAACACACAGGCGCAGAGCCAGGCTGGGTA...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTCAGCCAAAGAAGAAATaGGTTTCTTCCCTTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPQPKKK*VSSLHP Trigger: GGGATGAAGGGAAGAAACCCATTTCTTCTTTGGCTG...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTGCCCCGTGCTTTCCCTaGGTCTTAATTTTGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPAPCFP*VLILFF Trigger: AAAGAACAAAATTAAGACCCAGGGAAAGCACGGGGC...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CAA 90 bp | CATGAAGGATGGGGTGACAATCCAATGCTTAGGAGATCTGGGACTTaGAGGTCTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: HEGWGDNPMLRRSGT*RSKCELRAASGVLQ Trigger: CTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAGACCTCAAAGTCCCAGATCTCCTAAGCATTGGATTGTCACCCCATCCTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR TCA 90 bp | GAACCTGCTCCTCAGGTGAACACGGTCCTCACACAGTCACACCCCAGTGATCCCGATTCCATTGACTTGTaGATATCATCACGCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: EPAPQVNTVLTQSHPSDPDSIDL*ISSRTD Trigger: GTCTGTGCGTGATGATATTCACAAGTCAATGGAATC...GGGATCACTGGGGTGTGACTGTGTGAGGACCGTGTTCACCTGAGGAGCAGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | GACAGCAGCCAAAGAAGAAATGGGTTTCTTCCCTTCATCCCCTACCACATACCTGGCTGTCCACCCCTGTaGTGTGGTAGAGATGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: DSSQRRNGFLPFIPYHIPGCPPL*CGRDEA Trigger: AGCCTCATCTCTACCACAGCACAGGGGTGGACAGCC...AGGTATGTGGTAGGGGATGAAGGGAAGAAACCCATTTCTTCTTTGGCTGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTAGAGAGCCAGTGGTGTaGTTTTATTTAGCTTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPREPVV*FYLAFS Trigger: GCTGAAAGCTAAATAAAAGCACACCACTGGCTCTCT...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | GAACCTGCTCCTCAGGTGAACACGGTCCTCACACAGTCACACCCCAGTGATCCCAGTTTCCTGAGGGGGTaGCTGAAATCCCATTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: EPAPQVNTVLTQSHPSDPSFLRG*LKSHFK Trigger: TTTAAAATGGGATTTCAGCCACCCCCTCAGGAAACT...GGGATCACTGGGGTGTGACTGTGTGAGGACCGTGTTCACCTGAGGAGCAGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CAA 90 bp | AACAAGCAGAGTGGGGATGGGATGGCTTTGCTGGGCTCTCTCTTTTaGGCTCCAGTCACTGGTAGAGCAGTTGGAACAACGACTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: NKQSGDGMALLGSLF*APVTGRAVGTTTER Trigger: TCTTTCAGTCGTTGTTCCAACTGCTCTACCAGTGACTGGAGCCAAAAAGAGAGAGCCCAGCAAAGCCATCCCATCCCCACTCTGCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR TCA 90 bp | CCCGCAGACTTCACCAAGAGCAGGACCCAGATGGCCCACTTTGCCCACTTTCCATTATCAGCTGGCTGCTaGGAATCGGGTATTTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: PADFTKSRTQMAHFAHFPLSAGC*ESGILK Trigger: TTTTAAAATACCCGATTCTCAGCAGCCAGCTGATAA...TGGAAAGTGGGCAAAGTGGGCCATCTGGGTCCTGCTCTTGGTGAAGTCTGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | GCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGAGCTGTGAGAGGGATGATTTaGGAGACCAAGTGTGAGATG | + |
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Preference number: 2 (lower is better) Translates to: AAHNVQRQPHETLTNGGAVRGMI*ETKCEM Trigger: CATCTCACACTTGGTCTCCCAAATCATCCCTCTCAC...AGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR TCA 90 bp | TCCCAAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATGAATCTGTGCTTTTTTTTAAACCCAGACTaGCTCTGGGTTGCACGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SQTCSCLLTRASSMNLCFFLNPD*LWVARA Trigger: TGCACGTGCAACCCAGAGTCAGTCTGGGTTTAAAAA...AAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTTGGGA 50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | AAGAGAGAGCCAGTGGTGTGCTTTTATTTAGCTTTCAGCATGCCCAGAGCCCTTGTCACAGTCACCTTGTaGTGTCCAAGCACTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KREPVVCFYLAFSMPRALVTVTL*CPSTEQ Trigger: CTGCTCAGTGCTTGGACAGCACAAGGTGACTGTGAC...AAGGGCTCTGGGCATGCTGAAAGCTAAATAAAAGCACACCACTGGCTCTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | CTGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGGTGGAAGCCATTTCTTaGCATCAGGGGTTCAATAAT | + |
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Preference number: 2 (lower is better) Translates to: LHSVSRGAAHNVQRQPHEVEAIS*HQGFNN Trigger: ATTATTGAACCCCTGATGGCAAGAAATGGCTTCCAC...CTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | TGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGAAGATCCAGAGTCACTTaGAGTGGAAGCCATTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: CTQSPEVLHTMSKDNPTRRSRVT*SGSHFL Trigger: CAAGAAATGGCTTCCACTGCAAGTGACTCTGGATCT...TCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTCTCCTGGCTTCTTTCTaGCCTGTCACAATACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RGAAHNVQRQPHETLTNGLLASF*PVTIPR Trigger: TCTTGGTATTGTGACAGGGCAGAAAGAAGCCAGGAG...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR GCA 90 bp | GCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGAGCTGTAAAAGAAAGGCAATaGCCACTCGCCTTTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: AAHNVQRQPHETLTNGGAVKERQ*PLAFSF Trigger: GAAGGAAAAGGCGAGTGGGCATTGCCTTTCTTTTAC...AGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | GACAGCAGCCAAAGAAGAAATGGGTTTCTTCCCTTCATCCCCTACCACATACCTGCCCTCAGCCTGTCTTaGGGAGCAAATGATGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: DSSQRRNGFLPFIPYHIPALSLS*GANDVS Trigger: GCTTACATCATTTGCTCCCCAAGACAGGCTGAGGGC...AGGTATGTGGTAGGGGATGAAGGGAAGAAACCCATTTCTTCTTTGGCTGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR-3UTR CCA 90 bp | GACAGCAGCCAAAGAAGAAATGGGTTTCTTCCCTTCATCCCCTACCACATACCTTACCATGGAGGCTCCTaGCTTCTTTCTGCCCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: DSSQRRNGFLPFIPYHIPYHGGS*LLSALS Trigger: TGACAGGGCAGAAAGAAGCCAGGAGCCTCCATGGTA...AGGTATGTGGTAGGGGATGAAGGGAAGAAACCCATTTCTTCTTTGGCTGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CCA 90 bp | TGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACTCAAGAAAGAAGTCTaGGTCTGCACTCTCCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CTQSPEVLHTMSKDNPTRLKKEV*VCTLQR Trigger: TCTTTGGAGAGTGCAGACCCAGACTTCTTTCTTGAG...TCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR TCA 90 bp | CTGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGGTCTTGGGGAGCAAATaGTGTAAGCAAATTAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LHSVSRGAAHNVQRQPHEVLGSK*CKQIKR Trigger: CCTTTTAATTTGCTTACATCATTTGCTCCCCAAGAC...CTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR TCA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACAGCAGCTCAGAAGCCTTaGAGCCTTCCTGCCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YFTVLPYTSHASTQEAYTAAQKP*SLPASR Trigger: CCTGCTGGCAGGAAGGCTTCAAGGCTTCTGAGCTGC...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR GCA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACACAGGCAGAGAGTCCCTaGACTGGGGCTAGCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: YFTVLPYTSHASTQEAYTQAESP*TGASQR Trigger: TCTCTGGCTAGCCCCAGTGCAGGGACTCTCTGCCTG...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTCGTACTTTTGATCCTTaGAGACATTCTCTCATACCA | + |
|
Preference number: 2 (lower is better) Translates to: RGAAHNVQRQPHETLTNGRTFDP*RHSLIP Trigger: TGGTATGAGAGAATGTCTTCAAGGATCAAAAGTACG...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGAGAGCCAGTGGTGTGCTTTTATTTAGCTTTCAGCATGCCCAGAGCCCTTTTAAAATCTGAGCCCTaGTGTGGCTGTGCTTGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: KREPVVCFYLAFSMPRALLKSEP*CGCACK Trigger: CTTACAAGCACAGCCACATCAGGGCTCAGATTTTAA...AAGGGCTCTGGGCATGCTGAAAGCTAAATAAAAGCACACCACTGGCTCTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR GCA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACAGAGCCTCCTACCCAGTaGTGTCCTAAGAGCCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: YFTVLPYTSHASTQEAYTEPPTQ*CPKSPS Trigger: GGAAGGGCTCTTAGGACAGCACTGGGTAGGAGGCTC...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CAA 90 bp | GATAACTTTCAGGCTACTGCCCCGTGCTTTCCCTGGGTCTTAATTTaGTTCTTTCCCTGTGGCCTGACTGTATTAATTAGCGGGAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: DNFQATAPCFPWVLI*FFPCGLTVLISGNK Trigger: TTTGTTCCCGCTAATTAATACAGTCAGGCCACAGGGAAAGAACAAAATTAAGACCCAGGGAAAGCACGGGGCAGTAGCCTGAAAGTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR TCA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACAGTGCTGTCCAAGCACTaGGCAGCCAAAGCCTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: YFTVLPYTSHASTQEAYTVLSKH*AAKASK Trigger: CTTAGAGGCTTTGGCTGCTCAGTGCTTGGACAGCAC...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGAGAGCCAGTGGTGTGCTTTTATTTAGCTTTCAGCATGCCCAGAGCCCTTACACTACTACAGAACTaGGCAGAAAACTCTTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KREPVVCFYLAFSMPRALTLLQN*AENSFS Trigger: GGAGAAAGAGTTTTCTGCTCAGTTCTGTAGTAGTGT...AAGGGCTCTGGGCATGCTGAAAGCTAAATAAAAGCACACCACTGGCTCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGAGAGCCAGTGGTGTGCTTTTATTTAGCTTTCAGCATGCCCAGAGCCCTTATCTGCTTCCATTCTTaGTTATGCCAATTGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KREPVVCFYLAFSMPRALICFHS*LCQLPL Trigger: CAGAGGCAATTGGCATAAGCAAGAATGGAAGCAGAT...AAGGGCTCTGGGCATGCTGAAAGCTAAATAAAAGCACACCACTGGCTCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CCA 90 bp | CTGATTGTCACTCTGGTCTCTGCATGGGTTAGCTTTGATCATTTTGTAGCCCTCGCAAACAGAATGGAATaGGGTCCGGGTTTTGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LIVTLVSAWVSFDHFVALANRME*GPGFVL Trigger: CAAAACAAAACCCGGACCCCATTCCATTCTGTTTGC...GAGGGCTACAAAATGATCAAAGCTAACCCATGCAGAGACCAGAGTGACAATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR TCA 90 bp | GACAGCAGCCAAAGAAGAAATGGGTTTCTTCCCTTCATCCCCTACCACATACCTACATTGGCGTACTTTTaGTCCTTGAAGACATTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: DSSQRRNGFLPFIPYHIPTLAYF*SLKTFS Trigger: AGAGAATGTCTTCAAGGATCAAAAGTACGCCAATGT...AGGTATGTGGTAGGGGATGAAGGGAAGAAACCCATTTCTTCTTTGGCTGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CCA 90 bp | GACAGCAGCCAAAGAAGAAATGGGTTTCTTCCCTTCATCCCCTACCACATACCTAAACAGACCAAGCACTaGGAATCTGAATGTATCTAC | + |
|
Preference number: 2 (lower is better) Translates to: DSSQRRNGFLPFIPYHIPKQTKH*ESECIY Trigger: GTAGATACATTCAGATTCCCAGTGCTTGGTCTGTTT...AGGTATGTGGTAGGGGATGAAGGGAAGAAACCCATTTCTTCTTTGGCTGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR TCA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACAGGAGATCTGGGACTTTaGGGTCTAAGTGTGAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: YFTVLPYTSHASTQEAYTGDLGL*GLSVSS Trigger: TGAGCTCACACTTAGACCTCAAAGTCCCAGATCTCC...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR GCA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACACTCAGTCTCCAGAGGTaGTGCACACAATGTCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YFTVLPYTSHASTQEAYTLSLQR*CTQCPK Trigger: CTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAG...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CCA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACAACTCTGGTCTCTGCATaGGTTAGCTTTGATCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: YFTVLPYTSHASTQEAYTTLVSA*VSFDHF Trigger: AAAATGATCAAAGCTAACCCATGCAGAGACCAGAGT...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | TCCCTGCCTGTAGGCGACATCAGGCGGGAGTGGAGGTaGCCTGGCTCTGTCCACCTGCGTTCTGCCTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: SLPVGDIRREWR*PGSVHLRSASL Trigger: TAGTGAGGCAGAACGCAGGTGGACAGAGCCAGGCCACCTCCACTCCCGCCTGATGTCGCCTACAGGCAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | GCCTGTAGGCGACATCAGGCGGGAGTGGAGGTGGCCTaGCTCTGTCCACCTGCGTTCTGCCTCACTATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ACRRHQAGVEVA*LCPPAFCLTMQ Trigger: TTGCATAGTGAGGCAGAACGCAGGTGGACAGAGCCAGGCCACCTCCACTCCCGCCTGATGTCGCCTACAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | ACGGTGGACTGTGGTCAACACGCAGCTCAGAAGCCTTaGAGCCTTCCTGCCAGCAGGCCCCTCAGTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVDCGQHAAQKP*SLPASRPLSLG Trigger: TCCCAGACTGAGGGGCCTGCTGGCAGGAAGGCTTCAAGGCTTCTGAGCTGCGTGTTGACCACAGTCCACCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | TCCATCTTGAACCACAGGCAAGCCAAAGAACAGTCTTaGCGGGCAGTACCCGCTGGGACACCAGCCCAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: SILNHRQAKEQS*RAVPAGTPAQP Trigger: CGGCTGGGCTGGTGTCCCAGCGGGTACTGCCCGCCAAGACTGTTCTTTGGCTTGCCTGTGGTTCAAGATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | AAGACAACCCCACGAGACACTAACCAACGGTGGAGCTaGGGCAGGGGCCTAGCTCAGGCAGCCTTTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: KTTPRDTNQRWS*GRGLAQAAFHL Trigger: GAGGTGAAAGGCTGCCTGAGCTAGGCCCCTGCCTCAGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | ATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTCAGGTaGACACGGTCCTCACACAGTCACACCCCAGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: IWGPAALNLLLR*TRSSHSHTPVI Trigger: GATCACTGGGGTGTGACTGTGTGAGGACCGTGTTCACCTGAGGAGCAGGTTCAGGGCTGCAGGACCCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | GGTCTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTaGAGCCCTGAACCTGCTCCTCAGGTGAACACGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GLSVSSEQHLGS*SPEPAPQVNTV Trigger: GACCGTGTTCACCTGAGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | GCACCGTTTAAAAATGAGCCTCCAGACCCCGCCGGCTaGGGAGGTGTGTATGGTCATCTCTGCCGTGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: APFKNEPPDPAG*GGVYGHLCRGW Trigger: CCAACCACGGCAGAGATGACCATACACACCTCCTCAGCCGGCGGGGTCTGGAGGCTCATTTTTAAACGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | CCCCAAAGGCCAAGGTGGCCTGTCACAGTCACCTTGTaGTGTCCAAGCACTGAGCAGCCAAAGCCTCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PQRPRWPVTVTL*CPSTEQPKPLS Trigger: GCTTAGAGGCTTTGGCTGCTCAGTGCTTGGACAGCACAAGGTGACTGTGACAGGCCACCTTGGCCTTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | TGGCCTGGCTCTGTCCACCTGCGTTCTGCCTCACTATaGAAAGGAATGAAGGAAGGCTTGGCACCCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: WPGSVHLRSASL*KGMKEGLAPLP Trigger: TGGGAGGGGTGCCAAGCCTTCCTTCATTCCTTTGCATAGTGAGGCAGAACGCAGGTGGACAGAGCCAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | GAACCTGCTCCTCAGGTGAACACGGTCCTCACACAGTCACACCCCAGTGATCCCGTCCCACTCTCCATCTaGAACCACAGGCAAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: EPAPQVNTVLTQSHPSDPVPLSI*NHRQAK Trigger: TTTGGCTTGCCTGTGGTTCAAGATGGAGAGTGGGAC...GGGATCACTGGGGTGTGACTGTGTGAGGACCGTGTTCACCTGAGGAGCAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | GGTTCTGGTGAGAGGGATGATTTGGGAGACCAAGTGTaGGATGCACCAGCTGGAGCAGAGTCCCCAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GSGERDDLGDQV*DAPAGAESPKA Trigger: GGCCTTTGGGGACTCTGCTCCAGCTGGTGCATCTCACACTTGGTCTCCCAAATCATCCCTCTCACCAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | CTGTCCACCTGCGTTCTGCCTCACTATGCAAAGGAATaGAGGAAGGCTTGGCACCCCTCCCAAACCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSTCVLPHYAKE*RKAWHPSQTCS Trigger: GCTGCAGGTTTGGGAGGGGTGCCAAGCCTTCCTTCATTCCTTTGCATAGTGAGGCAGAACGCAGGTGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | CAGAAGTGGGCCACACCAGTGACAGTTGCCACTACTTaGATCTCTGTCACCAGAGGGGCAAGCCTTGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QKWATPVTVATT*ISVTRGASLGD Trigger: GTCACCAAGGCTTGCCCCTCTGGTGACAGAGATGCAAGTAGTGGCAACTGTCACTGGTGTGGCCCACTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | CCCACGGGAATCCTGGTTCTGGTGAGAGGGATGATTTaGGAGACCAAGTGTGAGATGCACCAGCTGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PTGILVLVRGMI*ETKCEMHQLEQ Trigger: CTGCTCCAGCTGGTGCATCTCACACTTGGTCTCCCAAATCATCCCTCTCACCAGAACCAGGATTCCCGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTGTTTTGAAATCATCTTaGCTCCAAGACCAGGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCVLKSS*LQDQEG Trigger: TCCCTCCTGGTCTTGGAGCAAAGATGATTTCAAAAC...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | GAAACTCACAGAAAACCCTCAGAGCCTCCTACCCAGTaGTGTCCTAAGAGCCCTTCCAGCTCAATGGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ETHRKPSEPPTQ*CPKSPSSSMAP Trigger: TGGGGCCATTGAGCTGGAAGGGCTCTTAGGACAGCACTGGGTAGGAGGCTCTGAGGGTTTTCTGTGAGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | TCCAAGACCAGGAGGGAAAGGCTACCAGAGGGTACCTaGTACCCTAGTGTAGACCGTCATAAGGTAGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SKTRRERLPEGT*YPSVDRHKVAS Trigger: GGACGCTACCTTATGACGGTCTACACTAGGGTACCAGGTACCCTCTGGTAGCCTTTCCCTCCTGGTCTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | GGCTCATCAGACCCCGTGGGAAGATCCAGAGTCACTTaGAGTGGAAGCCATTTCTTGCCATCAGGGGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GSSDPVGRSRVT*SGSHFLPSGVQ Trigger: TTGAACCCCTGATGGCAAGAAATGGCTTCCACTGCAAGTGACTCTGGATCTTCCCACGGGGTCTGATGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | GTGGGGATGGGATGGCTTTGCTGGGCTCTCTCTTTTTaGCTCCAGTCACTGGTAGAGCAGTTGGAACAACGA | + |
|
Preference number: 3 (lower is better) Translates to: VGMGWLCWALSF*LQSLVEQLEQR Trigger: TCGTTGTTCCAACTGCTCTACCAGTGACTGGAGCCAAAAAGAGAGAGCCCAGCAAAGCCATCCCATCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTCCTGTCACAGTCACCTaGTGCTGTCCAAGCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RGAAHNVQRQPHETLTNGPVTVT*CCPSTE Trigger: CTCAGTGCTTGGACAGCACAAGGTGACTGTGACAGG...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | TGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGAGACAGTTGCCACTACTaGCATCTCTGTCACCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CTQSPEVLHTMSKDNPTRDSCHY*HLCHQR Trigger: CCTCTGGTGACAGAGATGCAAGTAGTGGCAACTGTC...TCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTAATGGCATGTTATTCTaGCATCTGTCTCTCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCNGMLF*HLSLHC Trigger: ACAATGGAGAGACAGATGCAAGAATAACATGCCATT...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATGAATCTGTGCTTTGGAGGGGAGGGGCACTaGACCAATCCAAGAAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQTCSCLLTRASSMNLCFGGEGH*TNPRKR Trigger: TCTCTTTCTTGGATTGGTCAAGTGCCCCTCCCCTCC...AAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | AAAACCCAACCAGCTGCACTCAGTCTCCAGAGGTGCTaGACACAATGTCCAAAGACAACCCCACGAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: KTQPAALSLQRC*TQCPKTTPRDT Trigger: AGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCAGCTGGTTGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | CCCGCAGACTTCACCAAGAGCAGGACCCAGATGGCCCACTTTGCCCACTTTCCATCTTGCTTATGCCAATaGCCTCTGGAAATGGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: PADFTKSRTQMAHFAHFPSCLCQ*PLEMDF Trigger: AAAATCCATTTCCAGAGGCAATTGGCATAAGCAAGA...TGGAAAGTGGGCAAAGTGGGCCATCTGGGTCCTGCTCTTGGTGAAGTCTGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | CATCAAAGCCAGCTCTCTGAGTACCATGGAGGCTCCTaGCTTCTTTCTGCCCTGTCACAATACCAAGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HQSQLSEYHGGS*LLSALSQYQEV Trigger: AACCTCTTGGTATTGTGACAGGGCAGAAAGAAGCCAGGAGCCTCCATGGTACTCAGAGAGCTGGCTTTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | CTGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGCACATTGGCGTACTTTaGATCCTTGAAGACATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHSVSRGAAHNVQRQPHEHIGVL*ILEDIL Trigger: GAGAATGTCTTCAAGGATCAAAAGTACGCCAATGTG...CTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | GAACCTGCTCCTCAGGTGAACACGGTCCTCACACAGTCACACCCCAGTGATCCCGTCACACTTCATGTTTaGAAATCATCTTTGCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: EPAPQVNTVLTQSHPSDPVTLHV*KSSLLQ Trigger: TTGGAGCAAAGATGATTTCAAAACATGAAGTGTGAC...GGGATCACTGGGGTGTGACTGTGTGAGGACCGTGTTCACCTGAGGAGCAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | GGTACCAGAGTGTGCTGCCCTCTGGAGAGCTGGCTCTaGACAGAACTTAAAGAAACTCACAGAAAACCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTRVCCPLESWL*TELKETHRKPS Trigger: TGAGGGTTTTCTGTGAGTTTCTTTAAGTTCTGTTCAGAGCCAGCTCTCCAGAGGGCAGCACACTCTGGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | AGACTTCACCAAGAGCAGGACCCAGATGGCCCACTTTaGCCACTTTCCATAGATAAAGACTTCTCCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: RLHQEQDPDGPL*PLSIDKDFSRL Trigger: GAGTCTGGAGAAGTCTTTATCTATGGAAAGTGGGCAAAGTGGGCCATCTGGGTCCTGCTCTTGGTGAAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | CTGGCTTCTTTCTGCCCTGTCACAATACCAAGAGGTTaGGGAAGACTAACATCCGCTAGTGTGGCTAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LASFCPVTIPRG*GRLTSASVAKQ Trigger: CTGTTTAGCCACACTAGCGGATGTTAGTCTTCCCCAACCTCTTGGTATTGTGACAGGGCAGAAAGAAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | TGTGCTTGTAAGTGGGTACCAGAGTGTGCTGCCCTCTaGAGAGCTGGCTCTGAACAGAACTTAAAGAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: CACKWVPECAAL*RAGSEQNLKKL Trigger: GAGTTTCTTTAAGTTCTGTTCAGAGCCAGCTCTCCAGAGGGCAGCACACTCTGGTACCCACTTACAAGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGAGAGCCAGTGGTGTGCTTTTATTTAGCTTTCAGCATGCCCAGAGCCCTTCCCTGGGTCTTAATTTaGTTCTTTCCCTGTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KREPVVCFYLAFSMPRALPWVLI*FFPCGL Trigger: CAGGCCACAGGGAAAGAACAAAATTAAGACCCAGGG...AAGGGCTCTGGGCATGCTGAAAGCTAAATAAAAGCACACCACTGGCTCTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | AAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATaGATCTGTGCTTTTAGTGTGGTCCTAACAAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPAAVSSPELAA*ICAFSVVLTSR Trigger: TCTGCTTGTTAGGACCACACTAAAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | GGATTAGCTCATTTACAAAACCAAAACCCAACCAGCTaGACTCAGTCTCCAGAGGTGCTGCACACAATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLAHLQNQNPTS*TQSPEVLHTMS Trigger: GGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCAGCTGGTTGGGTTTTGGTTTTGTAAATGAGCTAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | GAAGATAACTTTCAGGCTACTGCCCCGTGCTTTCCCTaGGTCTTAATTTTGTTCTTTCCCTGTGGCCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: EDNFQATAPCFP*VLILFFPCGLT Trigger: AGTCAGGCCACAGGGAAAGAACAAAATTAAGACCCAGGGAAAGCACGGGGCAGTAGCCTGAAAGTTATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATGAATCTGTGCTTTAATCTGCTTCCATTCTaGCTTATGCCAATTGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SQTCSCLLTRASSMNLCFNLLPF*LMPIAS Trigger: AGAGGCAATTGGCATAAGCAAGAATGGAAGCAGATT...AAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACACGCAGCTCAGAAGCCTaGAAGCCTTCCTGCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YFTVLPYTSHASTQEAYTRSSEA*KPSCQQ Trigger: CTGCTGGCAGGAAGGCTTCAAGGCTTCTGAGCTGCG...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTTTTTGGGGGATTCCATaGACTTGTGAATATCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: RGAAHNVQRQPHETLTNGFWGIP*TCEYHH Trigger: GTGATGATATTCACAAGTCAATGGAATCCCCCAAAA...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | CCCACCCACAGCATTCACATTTTTGGGGGATTCCATTaGCTTGTGAATATCATCACGCACAGACATGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: PTHSIHIFGGFH*LVNIITHRHEI Trigger: GATCTCATGTCTGTGCGTGATGATATTCACAAGTCAATGGAATCCCCCAAAAATGTGAATGCTGTGGGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | CAAACATCTTCACTGATTGTCACTCTGGTCTCTGCATaGGTTAGCTTTGATCATTTTGTAGCCCTCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QTSSLIVTLVSA*VSFDHFVALSL Trigger: CAGGCTGAGGGCTACAAAATGATCAAAGCTAACCCATGCAGAGACCAGAGTGACAATCAGTGAAGATGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | CACTGGGAATCTGAATGTATCTACAAACATCTTCACTaGTTGTCACTCTGGTCTCTGCATGGGTTAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HWESECIYKHLH*LSLWSLHGLAL Trigger: CAAAGCTAACCCATGCAGAGACCAGAGTGACAATCAGTGAAGATGTTTGTAGATACATTCAGATTCCCAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | ATTCCATTGACTTGTGAATATCATCACGCACAGACATaGGATCTCAAGAAAGAAGTCTGGGTCTGCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IPLTCEYHHAQT*DLKKEVWVCTL Trigger: GAGAGTGCAGACCCAGACTTCTTTCTTGAGATCTCATGTCTGTGCGTGATGATATTCACAAGTCAATGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CCA 72 bp | GTTAGCTTTGATCATTTTGTAGCCCTCAGCCTGTCTTaGGGAGCAAATGATGTAAGCAAATTAAAAGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VSFDHFVALSLS*GANDVSKLKGT Trigger: GGTGCCTTTTAATTTGCTTACATCATTTGCTCCCCAAGACAGGCTGAGGGCTACAAAATGATCAAAGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTGGCTAAACAGACCAAGCACTGGGAATCTGAATGTATCTACAAACATCTTGGCGGAGGACTTCCATaGAAAATAATGGAAATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SVAKQTKHWESECIYKHLGGGLP*KIMEIH Trigger: GTGAATTTCCATTATTTTCAATGGAAGTCCTCCGCC...AAGATGTTTGTAGATACATTCAGATTCCCAGTGCTTGGTCTGTTTAGCCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR TCA 72 bp | ACAGCATTCACATTTTTGGGGGATTCCATTGACTTGTaGATATCATCACGCACAGACATGAGATCTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TAFTFLGDSIDL*ISSRTDMRSQE Trigger: TTCTTGAGATCTCATGTCTGTGCGTGATGATATTCACAAGTCAATGGAATCCCCCAAAAATGTGAATGCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR GCA 72 bp | CCATCTTTATTTTACAGTTTTACCATACACATCTCATaGCAGCACACAGGAGGCATATACAAACAAACGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PSLFYSFTIHIS*QHTGGIYKQTH Trigger: GTGCGTTTGTTTGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATAAAGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTCTCTCAGTGTCTGGCTaGCTCCCTGCCCTGCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPLSVSG*LPALHA Trigger: CGCATGCAGGGCAGGGAGTCAGCCAGACACTGAGAG...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTCAGGGTAGCCTACACTaGTTCCTGTCGAGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCQGSLH*FLSRGQ Trigger: CTGACCTCTCGACAGGAAGCAGTGTAGGCTACCCTG...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | CTGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGTCCCCCGTGGCCAGCTaGCGGTTGCAGATGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSVSRGAAHNVQRQPHESPVAS*RLQMMQ Trigger: CTGCATCATCTGCAACCGGCAGCTGGCCACGGGGGA...CTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | CTGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGAGCTGCTCTCTCACATaGCGGGCAGGCTTTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSVSRGAAHNVQRQPHESCSLT*RAGFGE Trigger: CTCCCCAAAGCCTGCCCGGCATGTGAGAGAGCAGCT...CTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | GCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGAGCTGAGCTCTCCTTCTCCTaGTTGCTGCCTCCCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAHNVQRQPHETLTNGGAELSFS*LLPPRL Trigger: GAGCCGGGGAGGCAGCAAGCAGGAGAAGGAGAGCTC...AGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTTTGAGCAAAGGAGCATaGGATGGGAGGGACGATATG | + |
|
Preference number: 4 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCLSKGA*DGRDDM Trigger: CATATCGTCCCTCCCATCCCATGCTCCTTTGCTCAA...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | TCCCAAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATGAATCTGTGCTTTCAAAGTCCTGAGCCTTaGGGACCACCTGGGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQTCSCLLTRASSMNLCFQSPEP*GPPGSG Trigger: CCCCGACCCAGGTGGTCCGCAAGGCTCAGGACTTTG...AAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTATGCCGGGCAGGCTTTaGGGAGTTCTTGTATGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPMPGRL*GVLVCV Trigger: AACGCATACAAGAACTCCCCAAAGCCTGCCCGGCAT...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR TCA 90 bp | GCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGAGCTCTCCCCGGCTCCTCTTaGCACTCTTGTAGAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAHNVQRQPHETLTNGGALPGSS*HSCRTG Trigger: GCCAGTTCTACAAGAGTGTCAAGAGGAGCCGGGGAG...AGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | GCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGAGCTCATCTGTCAGCCAGCTaGATCTGGCAGTCTGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAHNVQRQPHETLTNGGAHLSAS*IWQSAH Trigger: GTGCGCAGACTGCCAGATGCAGCTGGCTGACAGATG...AGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | GGTCTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTATCGAGCCAAGAGGCTaGGCTAGTTGGAAAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSVSSEQHLGSCSPEPAIEPRG*ASWKIR Trigger: CCTGATTTTCCAACTAGCCCAGCCTCTTGGCTCGAT...AGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CAA 72 bp | GGGCTCATCAGACCCCGTGGGAAGATCCAGAGTCACTaGCAGTGGAAGCCATTTCTTGCCATCAGGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLIRPRGKIQSH*QWKPFLAIRGS Trigger: TGAACCCCTGATGGCAAGAAATGGCTTCCACTGCAAGTGACTCTGGATCTTCCCACGGGGTCTGATGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CAA 72 bp | CGTTCTGCCTCACTATGCAAAGGAATGAAGGAAGGCTaGGCACCCCTCCCAAACCTGCAGCTGTCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSASLCKGMKEG*APLPNLQLSPH Trigger: GTGAGGAGACAGCTGCAGGTTTGGGAGGGGTGCCAAGCCTTCCTTCATTCCTTTGCATAGTGAGGCAGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTCCTTGCAGTAGACACTaGCGGCCCTGGAGAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RGAAHNVQRQPHETLTNGPCSRH*RPWRSI Trigger: GATGCTTCTCCAGGGCCGGCAGTGTCTACTGCAAGG...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTTTATCCAGGATATGTTaGTTGCAGCCAGCACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPLSRIC*LQPAHW Trigger: CCAGTGTGCTGGCTGCAACCAACATATCCTGGATAA...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | TCCCAAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATGAATCTGTGCTTTTCAGCCAGCTGCATCTaGCAGTCTGCGCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQTCSCLLTRASSMNLCFSASCI*QSAHLR Trigger: CCTCAAGTGCGCAGACTGCCAGATGCAGCTGGCTGA...AAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | CTGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGCAAAGGAGCATGGGATaGGAGGGACGATATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHSVSRGAAHNVQRQPHEQRSMG*EGRYGG Trigger: TCCTCCATATCGTCCCTCCCATCCCATGCTCCTTTG...CTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTATGGCTCTCAGTGTCTaGCTGACTCCCTGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGAAHNVQRQPHETLTNGMALSV*LTPCPA Trigger: TGCAGGGCAGGGAGTCAGCCAGACACTGAGAGCCAT...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CAA 72 bp | AGTGGGGATGGGATGGCTTTGCTGGGCTCTCTCTTTTaGGCTCCAGTCACTGGTAGAGCAGTTGGAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: SGDGMALLGSLF*APVTGRAVGTT Trigger: CGTTGTTCCAACTGCTCTACCAGTGACTGGAGCCAAAAAGAGAGAGCCCAGCAAAGCCATCCCATCCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGAGCCAGTGGTGTGCTTTTATTTAGCTTTCAGCATGCCCAGAGCCCTTTCTCCTTCTCCTGCTTaGTGCCTCCCCGGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KREPVVCFYLAFSMPRALSPSPA*CLPGSS Trigger: AGAGGAGCCGGGGAGGCAGCAAGCAGGAGAAGGAGA...AAGGGCTCTGGGCATGCTGAAAGCTAAATAAAAGCACACCACTGGCTCTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | GCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGAGCTACTCCCTGCCCTGCATaGGCAATGATGCCCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: AAHNVQRQPHETLTNGGATPCPA*AMMPRL Trigger: TAATCTGGGCATCATTGCGCATGCAGGGCAGGGAGT...AGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTTTGCAGCCAGCACACTaGGGAATCTGTTGCATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGAAHNVQRQPHETLTNGLQPAH*GICCIG Trigger: GCCGATGCAACAGATTCCCCAGTGTGCTGGCTGCAA...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTAGTCATCGTTTTGCTTaGCTGTCTCATAGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCSHRFA*LSHSLL Trigger: AAGAAGACTATGAGACAGCCAAGCAAAACGATGACT...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| 3UTR CAA 72 bp | GGGCAGTACCCGCTGGGACACCAGCCCAGCCGTAATTaGAACAGAACTTGCAGGGAGATCCACTTAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GQYPLGHQPSRN*NRTCREIHLKS Trigger: AGATTTTAAGTGGATCTCCCTGCAAGTTCTGTTCAAATTACGGCTGGGCTGGTGTCCCAGCGGGTACTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR GCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTCCTGCTGGCAGGCTGTaGATTTTGTGCCAAAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGAAHNVQRQPHETLTNGPAGRL*ILCQSV Trigger: AACGCTTTGGCACAAAATGCACAGCCTGCCAGCAGG...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR TCA 90 bp | TGCACTCAGTCTCCAGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGAAGCTCTGAGAGTATTTaGTCTTCTCGGAAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSPEVLHTMSKDNPTRSSESI*SSRKLS Trigger: GCTGAGCTTCCGAGAAGATCAAATACTCTCAGAGCT...TCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCTGGAGACTGAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGTGTGGCCAAGCTCTaGGAGTATTTGATCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGAAHNVQRQPHETLTNGGVAKL*EYLIFS Trigger: CGAGAAGATCAAATACTCTCAGAGCTTGGCCACACC...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR TCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTTGTAATCCAGCCCATTaGGCAAAGGAGCATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RGAAHNVQRQPHETLTNGCNPAH*AKEHGM Trigger: CATCCCATGCTCCTTTGCTCAATGGGCTGGATTACA...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR TCA 90 bp | GACAGCAGCCAAAGAAGAAATGGGTTTCTTCCCTTCATCCCCTACCACATACCTGCCCTGCATGCGCAATaGTGCCCAGATTACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSSQRRNGFLPFIPYHIPALHAQ*CPDYCP Trigger: TGGACAGTAATCTGGGCATCATTGCGCATGCAGGGC...AGGTATGTGGTAGGGGATGAAGGGAAGAAACCCATTTCTTCTTTGGCTGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | CTGATTGTCACTCTGGTCTCTGCATGGGTTAGCTTTGATCATTTTGTAGCCCTCAGACACTGCCGGCCCTaGAGAAGCATCTGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIVTLVSAWVSFDHFVALRHCRP*RSICQP Trigger: TGGCTGACAGATGCTTCTCCAGGGCCGGCAGTGTCT...GAGGGCTACAAAATGATCAAAGCTAACCCATGCAGAGACCAGAGTGACAATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
||
| CDS-3UTR CCA 90 bp | TCCCAAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATGAATCTGTGCTTTAGAGGCTGGGCTAGTTaGAAAATCAGGGTAGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQTCSCLLTRASSMNLCFRGWAS*KIRVAY Trigger: GTAGGCTACCCTGATTTTCCAACTAGCCCAGCCTCT...AAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CAA 72 bp | TGGGGTGACAATCCAATGCTTAGGAGATCTGGGACTTaGAGGTCTAAGTGTGAGCTCAGAGCAGCATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: WGDNPMLRRSGT*RSKCELRAASG Trigger: CCCAGATGCTGCTCTGAGCTCACACTTAGACCTCAAAGTCCCAGATCTCCTAAGCATTGGATTGTCACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR GCA 90 bp | AAGAGAGAGCCAGTGGTGTGCTTTTATTTAGCTTTCAGCATGCCCAGAGCCCTTCCAGGATATGTTGGTTaGAGCCAGCACACTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: KREPVVCFYLAFSMPRALPGYVG*SQHTGE Trigger: TTCCCCAGTGTGCTGGCTGCAACCAACATATCCTGG...AAGGGCTCTGGGCATGCTGAAAGCTAAATAAAAGCACACCACTGGCTCTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR GCA 90 bp | GCTAGTGTGGCTAAACAGACCAAGCACTGGGAATCTGAATGTATCTACAAACATGCTGACTCCCTGCCCTaGATGCGCAATGATGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ASVAKQTKHWESECIYKHADSLP*MRNDAQ Trigger: CTGGGCATCATTGCGCATGCAGGGCAGGGAGTCAGC...ATGTTTGTAGATACATTCAGATTCCCAGTGCTTGGTCTGTTTAGCCACACTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CCA 90 bp | AGTGTGGCTAAACAGACCAAGCACTGGGAATCTGAATGTATCTACAAACATCTTAACTGGCCCCAGCGATaGCGCCCCGCGTCCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVAKQTKHWESECIYKHLNWPQR*RPASFF Trigger: AAAGAAGGACGCGGGGCGCCATCGCTGGGGCCAGTT...AAGATGTTTGTAGATACATTCAGATTCCCAGTGCTTGGTCTGTTTAGCCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTTGCCATAAATCCTATTaGTGTGGCCAAGCTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RGAAHNVQRQPHETLTNGCHKSY*CGQALR Trigger: TCTCAGAGCTTGGCCACACCAATAGGATTTATGGCA...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CCA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGTCCTGTCCCATCCATaGAGAAACTCCCATTCATTA | + |
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Preference number: 4 (lower is better) Translates to: RGAAHNVQRQPHETLTNGVLSHP*RNSHSL Trigger: TAATGAATGGGAGTTTCTCCATGGATGGGACAGGAC...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| 3UTR CAA 72 bp | CAGGCTACTGCCCCGTGCTTTCCCTGGGTCTTAATTTaGTTCTTTCCCTGTGGCCTGACTGTATTAATTAGC | + |
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Preference number: 4 (lower is better) Translates to: QATAPCFPWVLI*FFPCGLTVLIS Trigger: GCTAATTAATACAGTCAGGCCACAGGGAAAGAACAAAATTAAGACCCAGGGAAAGCACGGGGCAGTAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR GCA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACAGTCTGGCTGACTCCCTaGCCTGCATGCGCAATGATG | + |
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Preference number: 4 (lower is better) Translates to: YFTVLPYTSHASTQEAYTVWLTP*PACAMM Trigger: CATCATTGCGCATGCAGGGCAGGGAGTCAGCCAGAC...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR TCA 90 bp | GGGATCCTTGGGCCTTTGGTCTCATCACTTCATGTAAAAGAAAGGCAATGCCCATTGTGCCAAAGCGTTTaGAGAAATCTTCCTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GILGPLVSSLHVKERQCPLCQSV*RNLPCS Trigger: ACTGCAAGGAAGATTTCTTCAAACGCTTTGGCACAA...TGGGCATTGCCTTTCTTTTACATGAAGTGATGAGACCAAAGGCCCAAGGATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CCA 90 bp | GTCGAGAGGTCAGAGGTGGGTCCCCCAGCCATGGCTCTCAGTGTCTaGCTGACTCCCTGCCCTGCATGCGCAATGATGCCCAGATTACTG | + |
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Preference number: 5 (lower is better) Translates to: VERSEVGPPAMALSV*LTPCPACAMMPRLL Trigger: CAGTAATCTGGGCATCATTGCGCATGCAGGGCAGGGAGTCAGCCAGACACTGAGAGCCATGGCTGGGGGACCCACCTCTGACCTCTCGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS GCA 90 bp | GGGTCCCCCAGCCATGGCTCTCAGTGTCTGGCTGACTCCCTGCCCTaGATGCGCAATGATGCCCAGATTACTGTCCACGGTGTAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: GSPSHGSQCLADSLP*MRNDAQITVHGVIQ Trigger: CTGGATTACACCGTGGACAGTAATCTGGGCATCATTGCGCATGCAGGGCAGGGAGTCAGCCAGACACTGAGAGCCATGGCTGGGGGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CAA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTACACTGGGGAATCTGTaGCATCGGCACACCGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCTLGNL*HRHTEH Trigger: ATGCTCGGTGTGCCGATGCAACAGATTCCCCAGTGT...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CAA 90 bp | CCTTCCTGCCAGCAGGCCCCTCAGTCTGGGAGCATCATACGTGGGACTGGCTGTCTTATCCAGGATATGTaGGTTGCAGCCAGCACACTG | + |
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Preference number: 5 (lower is better) Translates to: PSCQQAPQSGSIIRGTGCLIQDM*VAASTL Trigger: CAGTGTGCTGGCTGCAACCAACATATCCTGGATAAG...ACAGCCAGTCCCACGTATGATGCTCCCAGACTGAGGGGCCTGCTGGCAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS GCA 90 bp | GCAGGCTTTGGGGAGTTCTTGTATGCGTTCTTTAGTGTCTCCAGCTaGTTTGCTGTGATGGTGGTCCGAGGTCGCTTAGCCCCAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AGFGEFLYAFFSVSS*FAVMVVRGRLAPAS Trigger: GGAGGCTGGGGCTAAGCGACCTCGGACCACCATCACAGCAAAGCAGCTGGAGACACTAAAGAACGCATACAAGAACTCCCCAAAGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027740.14 ENSMUST00000195275.2 |
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| CDS-3UTR CAA 90 bp | AGTGTGGCTAAACAGACCAAGCACTGGGAATCTGAATGTATCTACAAACATCTTATCTCCGGGAGCCCCTaGACAGCCCCCTCCGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: SVAKQTKHWESECIYKHLISGSP*TAPSAG Trigger: CCCCGCGGAGGGGGCTGTCAAGGGGCTCCCGGAGAT...AAGATGTTTGTAGATACATTCAGATTCCCAGTGCTTGGTCTGTTTAGCCACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CAA 90 bp | TCCCAAACCTGCAGCTGTCTCCTCACCAGAGCTAGCAGCATGAATCTGTGCTTTCATGCCGGGCAGGCTTaGGGGAGTTCTTGTATGCGT | + |
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Preference number: 5 (lower is better) Translates to: SQTCSCLLTRASSMNLCFHAGQA*GSSCMR Trigger: ACGCATACAAGAACTCCCCAAAGCCTGCCCGGCATG...AAAGCACAGATTCATGCTGCTAGCTCTGGTGAGGAGACAGCTGCAGGTTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CCA 90 bp | CAGTGTCTGTCCAGGACCTTCAGGATGAACTTATCCAGGATATGTTaGTTGCAGCCAGCACACTGGGGAATCTGTTGCATCGGCACACCG | + |
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Preference number: 5 (lower is better) Translates to: QCLSRTFRMNLSRIC*LQPAHWGICCIGTP Trigger: CGGTGTGCCGATGCAACAGATTCCCCAGTGTGCTGGCTGCAACCAACATATCCTGGATAAGTTCATCCTGAAGGTCCTGGACAGACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CAA 90 bp | AGAGGTGCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTTCCAGGATATGTTGGTaGCAGCCAGCACACTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: RGAAHNVQRQPHETLTNGSRICW*QPAHWG Trigger: TCCCCAGTGTGCTGGCTGCAACCAACATATCCTGGA...ACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGCACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CAA 90 bp | CTGATTGTCACTCTGGTCTCTGCATGGGTTAGCTTTGATCATTTTGTAGCCCTCTGGCAGTCTGCGCACTaGAGGCAGGAGCTGTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LIVTLVSAWVSFDHFVALWQSAH*RQELCQ Trigger: CTGGCACAGCTCCTGCCTCAAGTGCGCAGACTGCCA...GAGGGCTACAAAATGATCAAAGCTAACCCATGCAGAGACCAGAGTGACAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CCA 90 bp | AAAAGGAGGATGGTCCATCTCATCGAGCCAAGAGGCTGGGCTAGTTaGAAAATCAGGGTAGCCTACACTGCTTCCTGTCGAGAGGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: KRRMVHLIEPRGWAS*KIRVAYTASCREVR Trigger: TCTGACCTCTCGACAGGAAGCAGTGTAGGCTACCCTGATTTTCCAACTAGCCCAGCCTCTTGGCTCGATGAGATGGACCATCCTCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CAA 90 bp | CTAAGTGTGAGCTCAGAGCAGCATCTGGGGTCCTGCAGCCCTGAACCTGCTCCTTTTGTGCCAAAGCGTTaGAAGAAATCTTCCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSVSSEQHLGSCSPEPAPFVPKR*KKSSLQ Trigger: CTGCAAGGAAGATTTCTTCAAACGCTTTGGCACAAA...AGGAGCAGGTTCAGGGCTGCAGGACCCCAGATGCTGCTCTGAGCTCACACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CAA 90 bp | GCTGCACACAATGTCCAAAGACAACCCCACGAGACACTAACCAACGGTGGAGCTCAAGTCCTGATAGGATaGTCCTGTCCCATCCATGGA | + |
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Preference number: 5 (lower is better) Translates to: AAHNVQRQPHETLTNGGAQVLIG*SCPIHG Trigger: TCCATGGATGGGACAGGACAATCCTATCAGGACTTG...AGCTCCACCGTTGGTTAGTGTCTCGTGGGGTTGTCTTTGGACATTGTGTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS-3UTR CAA 90 bp | TATTTTACAGTTTTACCATACACATCTCATGCCAGCACACAGGAGGCATATACAGGCTTTGGGGAGTTCTaGTATGCGTTCTTTAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: YFTVLPYTSHASTQEAYTGFGEF*YAFFSV Trigger: GACACTAAAGAACGCATACAAGAACTCCCCAAAGCC...TGTATATGCCTCCTGTGTGCTGGCATGAGATGTGTATGGTAAAACTGTAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CCA 72 bp | TCAGAGGTGGGTCCCCCAGCCATGGCTCTCAGTGTCTaGCTGACTCCCTGCCCTGCATGCGCAATGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: SEVGPPAMALSV*LTPCPACAMMP Trigger: GGGCATCATTGCGCATGCAGGGCAGGGAGTCAGCCAGACACTGAGAGCCATGGCTGGGGGACCCACCTCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS GCA 72 bp | ACACTGCCGGCCCTGGAGAAGCATCTGTCAGCCAGCTaGATCTGGCAGTCTGCGCACTTGAGGCAGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TLPALEKHLSAS*IWQSAHLRQEL Trigger: CAGCTCCTGCCTCAAGTGCGCAGACTGCCAGATGCAGCTGGCTGACAGATGCTTCTCCAGGGCCGGCAGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS TCA 72 bp | TGCCCAGATTACTGTCCACGGTGTAATCCAGCCCATTaGGCAAAGGAGCATGGGATGGGAGGGACGATATGG | + |
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Preference number: 6 (lower is better) Translates to: CPDYCPRCNPAH*AKEHGMGGTIW Trigger: CCATATCGTCCCTCCCATCCCATGCTCCTTTGCTCAATGGGCTGGATTACACCGTGGACAGTAATCTGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CAA 90 bp | TGTCTGTCCAGGACCTTCAGGATGAACTTATCCAGGATATGTTGGTaGCAGCCAGCACACTGGGGAATCTGTTGCATCGGCACACCGAGC | + |
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Preference number: 6 (lower is better) Translates to: CLSRTFRMNLSRICW*QPAHWGICCIGTPS Trigger: GCTCGGTGTGCCGATGCAACAGATTCCCCAGTGTGCTGGCTGCAACCAACATATCCTGGATAAGTTCATCCTGAAGGTCCTGGACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CAA 90 bp | CCAGTGTCTGTCCAGGACCTTCAGGATGAACTTATCCAGGATATGTaGGTTGCAGCCAGCACACTGGGGAATCTGTTGCATCGGCACACC | + |
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Preference number: 6 (lower is better) Translates to: PVSVQDLQDELIQDM*VAASTLGNLLHRHT Trigger: GGTGTGCCGATGCAACAGATTCCCCAGTGTGCTGGCTGCAACCAACATATCCTGGATAAGTTCATCCTGAAGGTCCTGGACAGACACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CCA 72 bp | ATGGTCCATCTCATCGAGCCAAGAGGCTGGGCTAGTTaGAAAATCAGGGTAGCCTACACTGCTTCCTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: MVHLIEPRGWAS*KIRVAYTASCR Trigger: TCGACAGGAAGCAGTGTAGGCTACCCTGATTTTCCAACTAGCCCAGCCTCTTGGCTCGATGAGATGGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CCA 72 bp | AAAAGGAGGATGGTCCATCTCATCGAGCCAAGAGGCTaGGCTAGTTGGAAAATCAGGGTAGCCTACACTGCT | + |
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Preference number: 6 (lower is better) Translates to: KRRMVHLIEPRG*ASWKIRVAYTA Trigger: AGCAGTGTAGGCTACCCTGATTTTCCAACTAGCCCAGCCTCTTGGCTCGATGAGATGGACCATCCTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CAA 72 bp | AGGACCTTCAGGATGAACTTATCCAGGATATGTTGGTaGCAGCCAGCACACTGGGGAATCTGTTGCATCGGC | + |
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Preference number: 6 (lower is better) Translates to: RTFRMNLSRICW*QPAHWGICCIG Trigger: GCCGATGCAACAGATTCCCCAGTGTGCTGGCTGCAACCAACATATCCTGGATAAGTTCATCCTGAAGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CCA 72 bp | TCCAGGACCTTCAGGATGAACTTATCCAGGATATGTTaGTTGCAGCCAGCACACTGGGGAATCTGTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: SRTFRMNLSRIC*LQPAHWGICCI Trigger: GATGCAACAGATTCCCCAGTGTGCTGGCTGCAACCAACATATCCTGGATAAGTTCATCCTGAAGGTCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CAA 72 bp | GTCCAGGACCTTCAGGATGAACTTATCCAGGATATGTaGGTTGCAGCCAGCACACTGGGGAATCTGTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: VQDLQDELIQDM*VAASTLGNLLH Trigger: ATGCAACAGATTCCCCAGTGTGCTGGCTGCAACCAACATATCCTGGATAAGTTCATCCTGAAGGTCCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS CAA 72 bp | TCCATAAGGGCTCCCATCCCTCAAGTCCTGATAGGATaGTCCTGTCCCATCCATGGAGAAACTCCCATTCAT | + |
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Preference number: 6 (lower is better) Translates to: SIRAPIPQVLIG*SCPIHGETPIH Trigger: ATGAATGGGAGTTTCTCCATGGATGGGACAGGACAATCCTATCAGGACTTGAGGGATGGGAGCCCTTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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| CDS TCA 72 bp | CACGTTGCCATAAATCCTATTGGTGTGGCCAAGCTCTaGGAGTATTTGATCTTCTCGGAAGCTCAGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: HVAINPIGVAKL*EYLIFSEAQLT Trigger: AGTGAGCTGAGCTTCCGAGAAGATCAAATACTCTCAGAGCTTGGCCACACCAATAGGATTTATGGCAACGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027740.14 |
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