Pregenerated sensors for LHX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026934Ensembl transcript IDs: ENSMUST00000028302.8, ENSMUST00000054099.16
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATaGACAGCATGGGATGGGGCTAGCCATCCACCCAGAGGCAGCACC | + |
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Preference number: 1 (lower is better) Translates to: FSHLGTLSFPQRSLE*TAWDGASHPPRGST Trigger: GGTGCTGCCTCTGGGTGGATGGCTAGCCCCATCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 90 bp | GAAGGACTTTGGAGTCCCTCAGCCCCAGGGAGCTGCCAGAGAGCCTaGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: EGLWSPSAPGSCQRA*KWDSPYSLTWEPCP Trigger: AGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTGGCAGCTCCCTGGGGCTGAGGGACTCCAAAGTCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 90 bp | CCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTaGAATGGACAGCATGGGATGGGGCTAGCCATCCACCCAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: PYSLTWEPCPSLRGP*NGQHGMGLAIHPEA Trigger: TGCCTCTGGGTGGATGGCTAGCCCCATCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR TCA 90 bp | TCCAGAAAGCTCTACTCCCCCAACACACGGCATTCCAGAACAGAATaGTCTGGAGACTCCGGGGAGGGAGAGCTGGCAGCAGTAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SRKLYSPNTRHSRTE*SGDSGEGELAAVRR Trigger: CCTCCTTACTGCTGCCAGCTCTCCCTCCCCGGAGTCTCCAGATCATTCTGTTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 90 bp | AGCTGCCAGAGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTaGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACAGCAT | + |
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Preference number: 1 (lower is better) Translates to: SCQRAWKWDSPYSLT*EPCPSLRGPWNGQH Trigger: ATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR TCA 90 bp | GTTTTCAGGAATGATCTTAACTTTCACGTGGTCAAGCTTTGTGTCTaGGACAGATTGGGTTGGGAGGACCCCCAGCCCAGCCTCCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: VFRNDLNFHVVKLCV*DRLGWEDPQPSLLQ Trigger: CTGGAGGAGGCTGGGCTGGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAAGCTTGACCACGTGAAAGTTAAGATCATTCCTGAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR TCA 90 bp | GGAAGGACACAAGCACAGTCTCCTACCAAGCCCCATCAGAAGCGATaGAGCAAGGCGTTACTGTTGTTTTCTGCCAGGACATTAGGTAGG | + |
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Preference number: 1 (lower is better) Translates to: GRTQAQSPTKPHQKR*SKALLLFSARTLGR Trigger: CCTACCTAATGTCCTGGCAGAAAACAACAGTAACGCCTTGCTTCATCGCTTCTGATGGGGCTTGGTAGGAGACTGTGCTTGTGTCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 90 bp | CCAGTAAAGAAAGAGAAATGCTTACAAGAAATGGTCACTGGCTTGTaGACAGCCACCAGGCAGGCCACCCTTGTGTCCAAGGAAGGACTT | + |
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Preference number: 1 (lower is better) Translates to: PVKKEKCLQEMVTGL*TATRQATLVSKEGL Trigger: AAGTCCTTCCTTGGACACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCATTTCTCTTTCTTTACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 90 bp | CAGGTAGCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCACGTaGTCAAGCTTTGTGTCTGAGACAGATTGGGTTGGGAGGACCCCC | + |
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Preference number: 1 (lower is better) Translates to: QVAKILFSGMILTFT*SSFVSETDWVGRTP Trigger: GGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAAGCTTGACCACGTGAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGCTACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR GCA 90 bp | TCGGAAATAGCAGCAAGGGTTAACTGGCCAGTAAAGAAAGAGAAATaGTTACAAGAAATGGTCACTGGCTTGTGGACAGCCACCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SEIAARVNWPVKKEK*LQEMVTGLWTATRQ Trigger: CTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCATTTCTCTTTCTTTACTGGCCAGTTAACCCTTGCTGCTATTTCCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CAA 90 bp | AAGAAATGGTCACTGGCTTGTGGACAGCCACCAGGCAGGCCACCCTaGTGTCCAAGGAAGGACTTTGGAGTCCCTCAGCCCCAGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: KKWSLACGQPPGRPP*CPRKDFGVPQPQGA Trigger: AGCTCCCTGGGGCTGAGGGACTCCAAAGTCCTTCCTTGGACACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CAA 90 bp | TCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTaGGAATGGACAGCATGGGATGGGGCTAGCCATCCACCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SLFSHLGTLSFPQRS*EWTAWDGASHPPRG Trigger: GCCTCTGGGTGGATGGCTAGCCCCATCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGAAGGGGCTCCAGAAAGCTCTACTCCCCCAACACACGGCATTCCAGAACCAGCACCAAGACCCCTaGGTTAGAGCCAGGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LEKGLQKALLPQHTAFQNQHQDP*VRARGS Trigger: GCTTCCCCTGGCTCTAACTCAGGGGTCTTGGTGCTG...GTTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTCTGGAGCCCCTTCTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | TGGTCACTGGCTTGTGGACAGCCACCAGGCAGGCCACCCTTGTGTCCAAGGAAGTTGGAATGGACAGCATaGGATGGGGCTAGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: WSLACGQPPGRPPLCPRKLEWTA*DGASHP Trigger: TGGATGGCTAGCCCCATCCCATGCTGTCCATTCCAA...CTTCCTTGGACACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | TGGTCACTGGCTTGTGGACAGCCACCAGGCAGGCCACCCTTGTGTCCAAGGAAGCAGAGAGCCTGGAAGTaGGACAGTCCCTATTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: WSLACGQPPGRPPLCPRKQRAWK*DSPYSL Trigger: GAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTG...CTTCCTTGGACACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTCGCATCCAAGGAAGGACTTTaGAGTCCCTCAGCCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ILLCTRGRLCLRRGIVLASKEGL*SPSAPG Trigger: CCCTGGGGCTGAGGGACTCCAAAGTCCTTCCTTGGA...TGCGAGAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CAA 90 bp | GAGCTGCCAGAGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTaGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: ELPESLEVGQSLFSH*GTLSFPQRSLEWTA Trigger: TGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTGGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCCAGAGGTCCTTGGAATaGACAGCATGGGATGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: EVCSQVLSVARKDTSTVSQRSLE*TAWDGA Trigger: AGCCCCATCCCATGCTGTCCATTCCAAGGACCTCTG...GGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | TGCACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTTCCAAGGAAGGACTTTaGAGTCCCTCAGCCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CTILLCTRGRLCLRRGIVSKEGL*SPSAPG Trigger: CCCTGGGGCTGAGGGACTCCAAAGTCCTTCCTTGGA...AACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTTTGTGTCTGAGACAGATTGGGTTGGGAGGACCCCCAGCCCAGCCTCCTTTAGAGGCTACGCCTTaGAGAAGGGGCTCCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: QALCLRQIGLGGPPAQPPLEATP*RRGSRK Trigger: CTTTCTGGAGCCCCTTCTCCAAGGCGTAGCCTCTAA...AGGAGGCTGGGCTGGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAAGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACAGCATaGGATGGGGCTAGCCATCCA | + |
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Preference number: 2 (lower is better) Translates to: VGQSLFSHLGTLSFPQRSLEWTA*DGASHP Trigger: TGGATGGCTAGCCCCATCCCATGCTGTCCATTCCAA...GGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | GACCCTGCTCGGGACCACAGTCTGTTTGGCAAAGGTGTCTGTTCACGGTGCACACCCAGGTTTTGTCAGTaGCCAGGAAGGACACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: DPARDHSLFGKGVCSRCTPRFCQ*PGRTQA Trigger: TGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGG...TGTGCACCGTGAACAGACACCTTTGCCAAACAGACTGTGGTCCCGAGCAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGAAGGGGCTCCAGAAAGCTCTACTCCCCCAACACACGGCATTCCAGAACTCCCTCAGAGGTCCTTaGAATGGACAGCATGGGATG | + |
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Preference number: 2 (lower is better) Translates to: LEKGLQKALLPQHTAFQNSLRGP*NGQHGM Trigger: CATCCCATGCTGTCCATTCCAAGGACCTCTGAGGGA...GTTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTCTGGAGCCCCTTCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTAAGGAGGAGAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACCCTATTCTCTCACTTaGGAACCCTGTCCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSKEERCAPRFCQWPGRTPYSLT*EPCPSL Trigger: GAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGG...TGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTCTCCTCCTTACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CAA 90 bp | TGGCCAGTAAAGAAAGAGAAATGCTTACAAGAAATGGTCACTGGCTaGTGGACAGCCACCAGGCAGGCCACCCTTGTGTCCAAGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: WPVKKEKCLQEMVTG*WTATRQATLVSKEG Trigger: TCCTTCCTTGGACACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCATTTCTCTTTCTTTACTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | TTACAGAACCAACAGGTAGCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCATGGTCACTGGCTTGTaGACAGCCACCAGGCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LQNQQVAKILFSGMILTFMVTGL*TATRQA Trigger: GGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCAT...GAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGCTACCTGTTGGTTCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | CTGTCGGAAATAGCAGCAAGGGTTAACTGGCCAGTAAAGAAAGAGAAATGCTTACCCTATTCTCTCACTTaGGAACCCTGTCCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LSEIAARVNWPVKKEKCLPYSLT*EPCPSL Trigger: GAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGG...TAAGCATTTCTCTTTCTTTACTGGCCAGTTAACCCTTGCTGCTATTTCCGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | TTACAGAACCAACAGGTAGCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCCAGAGGTCCTTGGAATaGACAGCATGGGATGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LQNQQVAKILFSGMILTFQRSLE*TAWDGA Trigger: AGCCCCATCCCATGCTGTCCATTCCAAGGACCTCTG...GAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGCTACCTGTTGGTTCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CCA 90 bp | TTACAGAACCAACAGGTAGCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCCAGAGAGCCTGGAAGTaGGACAGTCCCTATTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LQNQQVAKILFSGMILTFQRAWK*DSPYSL Trigger: GAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTG...GAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGCTACCTGTTGGTTCTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 72 bp | ACCAGGCAGGCCACCCTTGTGTCCAAGGAAGGACTTTaGAGTCCCTCAGCCCCAGGGAGCTGCCAGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: TRQATLVSKEGL*SPSAPGSCQRA Trigger: GGCTCTCTGGCAGCTCCCTGGGGCTGAGGGACTCCAAAGTCCTTCCTTGGACACAAGGGTGGCCTGCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CAA 90 bp | GGGAGAGCTGGCAGCAGTAAGGAGGAGAGGTGTGCTCCCAGGTTTTGTCAGTGGGTCCAAGGAAGGACTTaGGAGTCCCTCAGCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GRAGSSKEERCAPRFCQWVQGRT*ESLSPR Trigger: CCTGGGGCTGAGGGACTCCAAAGTCCTTCCTTGGAC...CCACTGACAAAACCTGGGAGCACACCTCTCCTCCTTACTGCTGCCAGCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 72 bp | TGGAGTCCCTCAGCCCCAGGGAGCTGCCAGAGAGCCTaGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: WSPSAPGSCQRA*KWDSPYSLTWE Trigger: TTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTGGCAGCTCCCTGGGGCTGAGGGACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CAA 90 bp | CAACACACGGCATTCCAGAACAGAATGATCTGGAGACTCCGGGGAGGGAGAGCTGTCCAAGGAAGGACTTaGGAGTCCCTCAGCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QHTAFQNRMIWRLRGGRAVQGRT*ESLSPR Trigger: CCTGGGGCTGAGGGACTCCAAAGTCCTTCCTTGGAC...AGCTCTCCCTCCCCGGAGTCTCCAGATCATTCTGTTCTGGAATGCCGTGTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 72 bp | TTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATaGACAGCATGGGATGGGGCTAGCCATCCACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LGTLSFPQRSLE*TAWDGASHPPR Trigger: TCTGGGTGGATGGCTAGCCCCATCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 72 bp | CTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTaGAATGGACAGCATGGGATGGGGCTAGCCATCCAC | + |
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Preference number: 3 (lower is better) Translates to: LTWEPCPSLRGP*NGQHGMGLAIH Trigger: GTGGATGGCTAGCCCCATCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR GCA 72 bp | GGCAAAGGTGTCTGTTCACGGTGCACAATTCTGCTTTaGACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATT | + |
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Preference number: 3 (lower is better) Translates to: GKGVCSRCTILL*TRGRLCLRRGI Trigger: AATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGCACCGTGAACAGACACCTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR GCA 72 bp | GACCACAGTCTGTTTGGCAAAGGTGTCTGTTCACGGTaGACAATTCTGCTTTGCACCCGAGGGAGGCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: DHSLFGKGVCSR*TILLCTRGRLC Trigger: GCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGCACCGTGAACAGACACCTTTGCCAAACAGACTGTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CAA 90 bp | ATGCTTACAAGAAATGGTCACTGGCTTGTGGACAGCCACCAGGCAGGCCACCCTTCCCTATTCTCTCACTaGGGAACCCTGTCCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: MLTRNGHWLVDSHQAGHPSLFSH*GTLSFP Trigger: AGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGA...AGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 72 bp | AGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTaGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: RAWKWDSPYSLT*EPCPSLRGPWN Trigger: ATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 72 bp | AGTAAGGAGGAGAGGTGTGCTCCCAGGTTTTGTCAGTaGCCAGGAAGGACACAAGCACAGTCTCCTACCAAG | + |
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Preference number: 3 (lower is better) Translates to: SKEERCAPRFCQ*PGRTQAQSPTK Trigger: CTTGGTAGGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTCTCCTCCTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CAA 90 bp | GTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCTACCAAGCCCCATCATCCCTATTCTCTCACTaGGGAACCCTGTCCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: VLSVARKDTSTVSYQAPSSLFSH*GTLSFP Trigger: AGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGA...TGATGGGGCTTGGTAGGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR-3UTR CAA 90 bp | AATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTCGCAGCAAGGCGTTACTGTaGTTTTCTGCCAGGACATTA | + |
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Preference number: 3 (lower is better) Translates to: NSALHPREAVPPKGNCSRSKALL*FSARTL Trigger: TAATGTCCTGGCAGAAAACAACAGTAACGCCTTGCT...GCGAGAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR TCA 72 bp | CAAGCACAGTCTCCTACCAAGCCCCATCAGAAGCGATaGAGCAAGGCGTTACTGTTGTTTTCTGCCAGGACA | + |
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Preference number: 3 (lower is better) Translates to: QAQSPTKPHQKR*SKALLLFSART Trigger: TGTCCTGGCAGAAAACAACAGTAACGCCTTGCTTCATCGCTTCTGATGGGGCTTGGTAGGAGACTGTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR TCA 72 bp | AATGATCTTAACTTTCACGTGGTCAAGCTTTGTGTCTaGGACAGATTGGGTTGGGAGGACCCCCAGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: NDLNFHVVKLCV*DRLGWEDPQPS Trigger: GCTGGGCTGGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAAGCTTGACCACGTGAAAGTTAAGATCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 72 bp | AGTAAAGAAAGAGAAATGCTTACAAGAAATGGTCACTaGCTTGTGGACAGCCACCAGGCAGGCCACCCTTGT | + |
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Preference number: 3 (lower is better) Translates to: SKEREMLTRNGH*LVDSHQAGHPC Trigger: ACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCATTTCTCTTTCTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| 3UTR CCA 72 bp | CCTCCTGCCCTGTCGGAAATAGCAGCAAGGGTTAACTaGCCAGTAAAGAAAGAGAAATGCTTACAAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: PPALSEIAARVN*PVKKEKCLQEM Trigger: CATTTCTTGTAAGCATTTCTCTTTCTTTACTGGCCAGTTAACCCTTGCTGCTATTTCCGACAGGGCAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| 3UTR CCA 72 bp | AAGATCCTGTTTTCAGGAATGATCTTAACTTTCACGTaGTCAAGCTTTGTGTCTGAGACAGATTGGGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KILFSGMILTFT*SSFVSETDWVG Trigger: CCCAACCCAATCTGTCTCAGACACAAAGCTTGACCACGTGAAAGTTAAGATCATTCCTGAAAACAGGATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GACCCTGCTCGGGACCACAGTCTGTTTGGCAAAGGTGTCTGTTCACGGTGCACACCTGCGTGGGCGGGATaGCCAGCTGGCATGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DPARDHSLFGKGVCSRCTPAWAG*PAGMRR Trigger: GCGCCGCATGCCAGCTGGGCATCCCGCCCACGCAGG...TGTGCACCGTGAACAGACACCTTTGCCAAACAGACTGTGGTCCCGAGCAGGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GTCACTGGCTTGTGGACAGCCACCAGGCAGGCCACCCTTGTGTCCAAGGAAGGAGGCGGGATGCCCAGCTaGCATGCGGCGCACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGLWTATRQATLVSKEGGGMPS*HAAHLV Trigger: GACCAAGTGCGCCGCATGCCAGCTGGGCATCCCGCC...TCCTTCCTTGGACACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| 3UTR CAA 72 bp | CACCAGGCAGGCCACCCTTGTGTCCAAGGAAGGACTTaGGAGTCCCTCAGCCCCAGGGAGCTGCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQAGHPCVQGRT*ESLSPRELPES Trigger: GCTCTCTGGCAGCTCCCTGGGGCTGAGGGACTCCAAAGTCCTTCCTTGGACACAAGGGTGGCCTGCCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGCCTGCGTGGGCGGGATaGCCAGCTGGCATGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DSPYSLTWEPCPSLRGPWPAWAG*PAGMRR Trigger: GCGCCGCATGCCAGCTGGGCATCCCGCCCACGCAGG...CCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTGGCGCACCACCTGCGTaGGCGGGATGCCCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNSALHPREAVPPKGNCSGAPPA*AGCPAG Trigger: GCCAGCTGGGCATCCCGCCCACGCAGGTGGTGCGCC...AGAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CACACGGCATTCCAGAACAGAATGATCTGGAGACTCCGGGGAGGGAGAGCTGGCCGTGGCGCGCCGGCTTaGGCGAAGTGTTGTAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HTAFQNRMIWRLRGGRAGRGAPA*AKCCRR Trigger: GCGCCTACAACACTTCGCCCAAGCCGGCGCGCCACG...GCCAGCTCTCCCTCCCCGGAGTCTCCAGATCATTCTGTTCTGGAATGCCGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTTGTGTCTGAGACAGATTGGGTTGGGAGGACCCCCAGCCCAGCCTCCTGGGCCAGGAAGGCTCTaGGGGGCTGCAGGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QALCLRQIGLGGPPAQPPGPGRL*GAAGDG Trigger: CCCATCTCCTGCAGCCCCCCAGAGCCTTCCTGGCCC...AGGAGGCTGGGCTGGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAAGCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | TGGTCACTGGCTTGTGGACAGCCACCAGGCAGGCCACCCTTGTGTCCAAGGAAGGATGCCCAGCTGGCATaGGGCGCACTTGGTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSLACGQPPGRPPLCPRKDAQLA*GALGPE Trigger: TTCGGGACCAAGTGCGCCGCATGCCAGCTGGGCATC...CTTCCTTGGACACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCTCGCCCGTGGCCAGCTaGCGCTTGCAGACCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVCSQVLSVARKDTSTVSSPVAS*RLQTTQ Trigger: CTGCGTGGTCTGCAAGCGGCAGCTGGCCACGGGCGA...GGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GAGAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTGTCTCGGAGGAGAGCTaGTCGCGCACGTGGCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERCAPRFCQWPGRTQAQSVSEES*SRTWRA Trigger: GGCGCGCCACGTGCGCGAGCAGCTCTCCTCCGAGAC...AGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTCGCACGTGGCGCGCCGGCTTaGGCGAAGTGTTGTAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLCTRGRLCLRRGIVLARGAPA*AKCCRR Trigger: GCGCCTACAACACTTCGCCCAAGCCGGCGCGCCACG...TGCGAGAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GCACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCGGGCCAGGAAGGCTCTaGGGGGCTGCAGGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQFCFAPEGGCASEGELFGPGRL*GAAGDG Trigger: CCCATCTCCTGCAGCCCCCCAGAGCCTTCCTGGCCC...GAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCCAGCCAGCACCCTCATaGGTGGGGGTCCACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVCSQVLSVARKDTSTVSQPAPS*VGVHLG Trigger: CCCCAGGTGGACCCCCACCCATGAGGGTGCTGGCTG...GGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | TCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACAGCATGGGATCGCCCGTGGCCAGCTaGCGCTTGCAGACCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGNPVLPSEVLGMDSMGSPVAS*RLQTTQ Trigger: CTGCGTGGTCTGCAAGCGGCAGCTGGCCACGGGCGA...TCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | ATGCTTACAAGAAATGGTCACTGGCTTGTGGACAGCCACCAGGCAGGCCACCCTGGCGGGATGCCCAGCTaGCATGCGGCGCACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLTRNGHWLVDSHQAGHPGGMPS*HAAHLV Trigger: GACCAAGTGCGCCGCATGCCAGCTGGGCATCCCGCC...AGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | TCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACAGCATGGGACAGCCAGCACCCTCATaGGTGGGGGTCCACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGNPVLPSEVLGMDSMGQPAPS*VGVHLG Trigger: CCCCAGGTGGACCCCCACCCATGAGGGTGCTGGCTG...TCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR TCA 90 bp | GAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCGCCGGCTGTCTTCCATaGGGTAGAACTCGTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EVCSQVLSVARKDTSTVSAGCLP*GRTRRP Trigger: CGGGCGACGAGTTCTACCTCATGGAAGACAGCCGGC...GGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR TCA 90 bp | GCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCGCCGGCTGTCTTCCATaGGGTAGAACTCGTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AWKWDSPYSLTWEPCPSLAGCLP*GRTRRP Trigger: CGGGCGACGAGTTCTACCTCATGGAAGACAGCCGGC...GAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCGATGCCCAGCTGGCATaGGGCGCACTTGGTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: AWKWDSPYSLTWEPCPSLDAQLA*GALGPE Trigger: TTCGGGACCAAGTGCGCCGCATGCCAGCTGGGCATC...GAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | TGCACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTTGGCCAGCTGCCGCTTaGAGACCACGCAGGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTILLCTRGRLCLRRGIVWPAAA*RPRRRS Trigger: GCTTCGCCTGCGTGGTCTGCAAGCGGCAGCTGGCCA...AACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGCGTTACTGTTGTTTTCTGCCAGGACATTAGGTAGGCCTAGCCTCCTGGTCTCGGAGGAGAGCTaGTCGCGCACGTGGCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKALLLFSARTLGRPSLLVSEES*SRTWRA Trigger: GGCGCGCCACGTGCGCGAGCAGCTCTCCTCCGAGAC...CAGGAGGCTAGGCCTACCTAATGTCCTGGCAGAAAACAACAGTAACGCCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CATTTAGAGGCTACGCCTTGGAGAAGGGGCTCCAGAAAGCTCTACTCCCCCAACTGGTACACGAAGTCCTaGGCGCGGCGCACCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLEATPWRRGSRKLYSPNWYTKS*ARRTTC Trigger: GCAGGTGGTGCGCCGCGCCCAGGACTTCGTGTACCA...GTTGGGGGAGTAGAGCTTTCTGGAGCCCCTTCTCCAAGGCGTAGCCTCTAAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCCTGGGTATACCAGGCTaGAGAGGAGAGGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AWKWDSPYSLTWEPCPSLLGIPG*RGEAGG Trigger: GCCCCCAGCCTCTCCTCTCCAGCCTGGTATACCCAG...GAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR TCA 90 bp | CCAGAGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTGGACGGCTCATCAGTaGAGGAGACTTCGGCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PESLEVGQSLFSHLGTLSWTAHQ*RRLRRR Trigger: GCGACGCCGAAGTCTCCTTCACTGATGAGCCGTCCA...GGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR TCA 90 bp | GAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCTCCACCTGGGGGCCCTaGAGGGACAAGGCTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVCSQVLSVARKDTSTVSSTWGP*RDKAQV Trigger: AACTTGAGCCTTGTCCCTTCAGGGCCCCCAGGTGGA...GGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR TCA 90 bp | GTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTCCACCTGGGGGCCCTaGAGGGACAAGGCTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGQSLFSHLGTLSFPQRSSTWGP*RDKAQV Trigger: AACTTGAGCCTTGTCCCTTCAGGGCCCCCAGGTGGA...GGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GAATGGACAGCATGGGATGGGGCTAGCCATCCACCCAGAGGCAGCACCAAGACCTGTCGGACTTGGAACTaGCGCGGGAGCGCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EWTAWDGASHPPRGSTKTCRTWN*RGSASY Trigger: ATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACA...GGTCTTGGTGCTGCCTCTGGGTGGATGGCTAGCCCCATCCCATGCTGTCCATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTCTGAGACAGATTGGGTTGGGAGGACCCCCAGCCCAGCCTCCTCCAGTCGGCTTCTCGCTGCTTaGCTGTTTCGTAGTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FVSETDWVGRTPSPASSSRLLAA*LFRSPP Trigger: AGGCGGACTACGAAACAGCCAAGCAGCGAGAAGCCG...ACTGGAGGAGGCTGGGCTGGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTGTCCTTGTCGGACTTaGAACTGCCGCGGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PESLEVGQSLFSHLGTLSCPCRT*NCRGSA Trigger: AGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACA...GGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCCTCTCGGTACTGCTCTaGACCCGTCAAGCCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVCSQVLSVARKDTSTVSLSVLL*TRQASV Trigger: CACGGAGGCTTGACGGGTCCAGAGCAGTACCGAGAG...GGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTCTGGGTATACCAGGCTaGAGAGGAGAGGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRAWKWDSPYSLTWEPCPLGIPG*RGEAGG Trigger: GCCCCCAGCCTCTCCTCTCCAGCCTGGTATACCCAG...AGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GACCCTGCTCGGGACCACAGTCTGTTTGGCAAAGGTGTCTGTTCACGGTGCACACAGAACTGCTCTCTGTaGACAGGTCGGAGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DPARDHSLFGKGVCSRCTQNCSL*TGRSWA Trigger: GGCCCAGCTCCGACCTGTCCACAGAGAGCAGTTCTG...TGTGCACCGTGAACAGACACCTTTGCCAAACAGACTGTGGTCCCGAGCAGGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GCACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCCGGCTTCTCGCTGCTTaGCTGTTTCGTAGTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQFCFAPEGGCASEGELFRLLAA*LFRSPP Trigger: AGGCGGACTACGAAACAGCCAAGCAGCGAGAAGCCG...GAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CAACACACGGCATTCCAGAACAGAATGATCTGGAGACTCCGGGGAGGGAGAGCTTGTCCTTGTCGGACTTaGAACTGCCGCGGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHTAFQNRMIWRLRGGRACPCRT*NCRGSA Trigger: AGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACA...AGCTCTCCCTCCCCGGAGTCTCCAGATCATTCTGTTCTGGAATGCCGTGTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | TTGGAGAAGGGGCTCCAGAAAGCTCTACTCCCCCAACACACGGCATTCCAGAACTGGACAGGTCGGAGCTaGGCCCATTTCCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKGLQKALLPQHTAFQNWTGRS*AHFQPA Trigger: TGCTGGCTGGAAATGGGCCCAGCTCCGACCTGTCCA...GTTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTCTGGAGCCCCTTCTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | TCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACAGCATGGGAGTGCTGGTCACAGCCTaGACACATCGGGATCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLGNPVLPSEVLGMDSMGVLVTA*THRDLS Trigger: CGAGAGATCCCGATGTGTGCAGGCTGTGACCAGCAC...TCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028302.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTCTGAGACAGATTGGGTTGGGAGGACCCCCAGCCCAGCCTCCTCCAGTAAACGGTCCAAGATGTaGTGGTCACAGCCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FVSETDWVGRTPSPASSSKRSKM*WSQPAH Trigger: GTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTT...ACTGGAGGAGGCTGGGCTGGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GCACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTTTCGTAGTCCGCCTTaGACACCAGCCGGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQFCFAPEGGCASEGELFFRSPP*TPAGCL Trigger: AAGACAGCCGGCTGGTGTGCAAGGCGGACTACGAAA...GAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | CAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTCGTTCTGGAACCACACCTaGACCACTCGCATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFCFAPEGGCASEGELFSFWNHT*TTRMSR Trigger: CCTGGACATGCGAGTGGTGCAGGTGTGGTTCCAGAA...CGAGAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | AATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTCGCTGTCGGACTTGGAACTaGCGCGGGAGCGCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: NSALHPREAVPPKGNCSRCRTWN*RGSASY Trigger: ATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACA...GCGAGAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCCTGTCTTGTCCCTCCTaGATGCTGTCCTTGTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AWKWDSPYSLTWEPCPSLLSCPS*MLSLSD Trigger: GTCCGACAAGGACAGCATCCAGGAGGGACAAGACAG...GAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| 3UTR CAA 72 bp | TCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTaGGAATGGACAGCATGGGATGGGGCTAGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHLGTLSFPQRS*EWTAWDGASHP Trigger: TGGATGGCTAGCCCCATCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| 3UTR CAA 72 bp | TGGCAAAGGTGTCTGTTCACGGTGCACAATTCTGCTTaGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WQRCLFTVHNSA*HPREAVPPKGN Trigger: ATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGCACCGTGAACAGACACCTTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR TCA 90 bp | CCAACACACGGCATTCCAGAACAGAATGATCTGGAGACTCCGGGGAGGGAGAGCGGCAGTCACTGCACTTaGGACACTTGCTGTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTHGIPEQNDLETPGRESGSHCT*DTCCAN Trigger: ATTGGCACAGCAAGTGTCTCAAGTGCAGTGACTGCC...GCTCTCCCTCCCCGGAGTCTCCAGATCATTCTGTTCTGGAATGCCGTGTGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCAAACGGTCCAAGATGTaGTGGTCACAGCCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EVCSQVLSVARKDTSTVSKRSKM*WSQPAH Trigger: GTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTT...GGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | CAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTCGTTGAGACACTTGCTGTaGCAATGTCGGTCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFCFAPEGGCASEGELFSLRHLL*QCRSRA Trigger: GGCTCTGGACCGACATTGGCACAGCAAGTGTCTCAA...CGAGAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAGGCTACGCCTTGGAGAAGGGGCTCCAGAAAGCTCTACTCCCCCAACTTTCGTAGTCCGCCTTaGACACCAGCCGGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLEATPWRRGSRKLYSPNFRSPP*TPAGCL Trigger: AAGACAGCCGGCTGGTGTGCAAGGCGGACTACGAAA...GTTGGGGGAGTAGAGCTTTCTGGAGCCCCTTCTCCAAGGCGTAGCCTCTAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | ATGCTTACAAGAAATGGTCACTGGCTTGTGGACAGCCACCAGGCAGGCCACCCTTTCTGGAACCACACCTaGACCACTCGCATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLTRNGHWLVDSHQAGHPFWNHT*TTRMSR Trigger: CCTGGACATGCGAGTGGTGCAGGTGTGGTTCCAGAA...AGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCGCTCAAGTTGGTGTCTaGGTATACCAGGCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PESLEVGQSLFSHLGTLSAQVGV*VYQAGE Trigger: CTCTCCAGCCTGGTATACCCAGACACCAACTTGAGC...GGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCGGACAAGGCTCAAGTTaGTGTCTGGGTATACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGQSLFSHLGTLSFPQRSGQGSS*CLGIPG Trigger: GCCTGGTATACCCAGACACCAACTTGAGCCTTGTCC...GGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCGCTAGCAGGAAAGTCTaGGTAGCCAGAACTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWKWDSPYSLTWEPCPSLASRKV*VARTAL Trigger: GAGAGCAGTTCTGGCTACCCAGACTTTCCTGCTAGC...GAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| 3UTR CAA 72 bp | GAGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTaGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLEVGQSLFSH*GTLSFPQRSLE Trigger: TTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGCCTGGAAGTGGGACAGTCCCTATTCTCTCACTTGGGAACCCTGTCCTGGCAGTCACTGCACTTaGGACACTTGCTGTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QRAWKWDSPYSLTWEPCPGSHCT*DTCCAN Trigger: ATTGGCACAGCAAGTGTCTCAAGTGCAGTGACTGCC...AGGACAGGGTTCCCAAGTGAGAGAATAGGGACTGTCCCACTTCCAGGCTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | TCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACAGCATGGGATTGAGACACTTGCTGTaGCAATGTCGGTCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGNPVLPSEVLGMDSMGLRHLL*QCRSRA Trigger: GGCTCTGGACCGACATTGGCACAGCAAGTGTCTCAA...TCCCATGCTGTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | TTGGAGAAGGGGCTCCAGAAAGCTCTACTCCCCCAACACACGGCATTCCAGAACGGGAGCGCTTCATATTaGGGAAATACTGTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEKGLQKALLPQHTAFQNGSASY*GNTVPS Trigger: GCTGGGGACAGTATTTCCGCAATATGAAGCGCTCCC...GTTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTCTGGAGCCCCTTCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GAGAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTGGACAAGGCTCAAGTTaGTGTCTGGGTATACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERCAPRFCQWPGRTQAQSGQGSS*CLGIPG Trigger: GCCTGGTATACCCAGACACCAACTTGAGCCTTGTCC...AGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | TTACAGAACCAACAGGTAGCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCGGCGCACCACCTGCGTaGGCGGGATGCCCAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQNQQVAKILFSGMILTFGAPPA*AGCPAG Trigger: GCCAGCTGGGCATCCCGCCCACGCAGGTGGTGCGCC...GAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGCTACCTGTTGGTTCTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACGCTCAAGTTGGTGTCTaGGTATACCAGGCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PILSLGNPVLPSEVLGMDAQVGV*VYQAGE Trigger: CTCTCCAGCCTGGTATACCCAGACACCAACTTGAGC...GTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGAAATGCTTACAAGAAATGGTCACTGGCTTGTGGACAGCCACCAGGCATGGACAGGTCGGAGCTaGGCCCATTTCCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EREMLTRNGHWLVDSHQAWTGRS*AHFQPA Trigger: TGCTGGCTGGAAATGGGCCCAGCTCCGACCTGTCCA...TGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCATTTCTCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGCGTTACTGTTGTTTTCTGCCAGGACATTAGGTAGGCCTAGCCTCCTGGGGAGCGCTTCATATTaGGGAAATACTGTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKALLLFSARTLGRPSLLGSASY*GNTVPS Trigger: GCTGGGGACAGTATTTCCGCAATATGAAGCGCTCCC...CAGGAGGCTAGGCCTACCTAATGTCCTGGCAGAAAACAACAGTAACGCCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GAAAGCTCTACTCCCCCAACACACGGCATTCCAGAACAGAATGATCTGGAGACTCTTGTCCCTCCTGGATaGTGTCCTTGTCGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESSTPPTHGIPEQNDLETLVPPG*CPCRTW Trigger: CCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAG...AGTCTCCAGATCATTCTGTTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGCTCTACTCCCCCAACACACGGCATTCCAGAACAGAATGATCTGGAGACTGTCTTGTCCCTCCTaGATGCTGTCCTTGTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QKALLPQHTAFQNRMIWRLSCPS*MLSLSD Trigger: GTCCGACAAGGACAGCATCCAGGAGGGACAAGACAG...TCTCCAGATCATTCTGTTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCCATCAGAAGCGATGAAGCAAGGCGTTACTGTTGTTTTCTGCCAGGACGCTAGCAGGAAAGTCTaGGTAGCCAGAACTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAPSEAMKQGVTVVFCQDASRKV*VARTAL Trigger: GAGAGCAGTTCTGGCTACCCAGACTTTCCTGCTAGC...GTCCTGGCAGAAAACAACAGTAACGCCTTGCTTCATCGCTTCTGATGGGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| 3UTR CAA 72 bp | AAGAAAGAGAAATGCTTACAAGAAATGGTCACTGGCTaGTGGACAGCCACCAGGCAGGCCACCCTTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKEKCLQEMVTG*WTATRQATLVS Trigger: GGACACAAGGGTGGCCTGCCTGGTGGCTGTCCACAAGCCAGTGACCATTTCTTGTAAGCATTTCTCTTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | TTACAGAACCAACAGGTAGCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCTGGCCAGCTGCCGCTTaGAGACCACGCAGGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQNQQVAKILFSGMILTFWPAAA*RPRRRS Trigger: GCTTCGCCTGCGTGGTCTGCAAGCGGCAGCTGGCCA...GAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGCTACCTGTTGGTTCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CCA 90 bp | GCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCACGTGGTCAAGCTTTGTGCAGAACTGCTCTCTGTaGACAGGTCGGAGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AKILFSGMILTFTWSSFVQNCSL*TGRSWA Trigger: GGCCCAGCTCCGACCTGTCCACAGAGAGCAGTTCTG...CACAAAGCTTGACCACGTGAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | GCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCACGTGGTCAAGCTTTGTGCTTGTCCCTCCTGGATaGTGTCCTTGTCGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKILFSGMILTFTWSSFVLVPPG*CPCRTW Trigger: CCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAG...CACAAAGCTTGACCACGTGAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR GCA 90 bp | TTACAGAACCAACAGGTAGCCAAGATCCTGTTTTCAGGAATGATCTTAACTTTCGTGCTGGTCACAGCCTaGACACATCGGGATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQNQQVAKILFSGMILTFVLVTA*THRDLW Trigger: CCAGAGATCCCGATGTGTGCAGGCTGTGACCAGCAC...GAAAGTTAAGATCATTCCTGAAAACAGGATCTTGGCTACCTGTTGGTTCTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054099.16 |
||
| CDS TCA 90 bp | CCTGGGCGTAGCTCTCGGTACTGCTCTGGACCCGTCAAGCCTCCGTaGTCCAGGGTAAAGCTGCCCAGGCCTCCTACGGGCCGGCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGRSSRYCSGPVKPP*SRVKLPRPPTGRPN Trigger: GTTGGGCCGGCCCGTAGGAGGCCTGGGCAGCTTTACCCTGGATCACGGAGGCTTGACGGGTCCAGAGCAGTACCGAGAGCTACGCCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS GCA 90 bp | CTGGGCGCGGCGCACCACCTGCGTGGGCGGGATGCCCAGCTGGCATaGGGCGCACTTGGTCCCGAAGCGCTTAAAGAAGTCGTCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGAAHHLRGRDAQLA*GALGPEALKEVVFA Trigger: TGCAAAGACGACTTCTTTAAGCGCTTCGGGACCAAGTGCGCCGCATGCCAGCTGGGCATCCCGCCCACGCAGGTGGTGCGCCGCGCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CAA 90 bp | CAAGCTTTGTGTCTGAGACAGATTGGGTTGGGAGGACCCCCAGCCCAGCCTCCTGTGGCCAGCTGCCGCTaGCAGACCACGCAGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QALCLRQIGLGGPPAQPPVASCR*QTTQAK Trigger: CTTCGCCTGCGTGGTCTGCAAGCGGCAGCTGGCCAC...AGGAGGCTGGGCTGGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAAGCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CAA 90 bp | GAATGGACAGCATGGGATGGGGCTAGCCATCCACCCAGAGGCAGCACCAAGACCCTGTCCTTGTCGGACTaGGAACTGCCGCGGGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EWTAWDGASHPPRGSTKTLSLSD*ELPRER Trigger: GCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAG...GGTCTTGGTGCTGCCTCTGGGTGGATGGCTAGCCCCATCCCATGCTGTCCATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS CCA 90 bp | GGCTCATCAGTGAAGGAGACTTCGGCGTCGCTGTCTTGTCCCTCCTaGATGCTGTCCTTGTCGGACTTGGAACTGCCGCGGGAGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSSVKETSASLSCPS*MLSLSDLELPRERF Trigger: GAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCGACGCCGAAGTCTCCTTCACTGATGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS GCA 90 bp | CTGCCGCGGGAGCGCTTCATATTGCGGAAATACTGTCCCCAGCGCTaGCGGCCAGCGTCTTTCTTCAGTCTCTTTTCCTTAGCCCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LPRERFILRKYCPQR*RPASFFSLFSLARR Trigger: TCGCCGGGCTAAGGAAAAGAGACTGAAGAAAGACGCTGGCCGGCAGCGCTGGGGACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS CCA 90 bp | CGGCGTCGCTGTCTTGTCCCTCCTGGATGCTGTCCTTGTCGGACTTaGAACTGCCGCGGGAGCGCTTCATATTGCGGAAATACTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRRCLVPPGCCPCRT*NCRGSASYCGNTVP Trigger: GGGGACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCGACGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS CCA 90 bp | ACGGTCCAAGATGTGCTGGTCACAGCCTGCACACATCGGGATCTCTaGAGTCCTGCTGAAGGTACAGAGGGCAGAAGCTCCAGGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TVQDVLVTACTHRDL*SPAEGTEGRSSRGT Trigger: GGTGCCCCTGGAGCTTCTGCCCTCTGTACCTTCAGCAGGACTCCAGAGATCCCGATGTGTGCAGGCTGTGACCAGCACATCTTGGACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054099.16 |
||
| CDS-3UTR CAA 90 bp | TGCACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTGTCCTTGTCGGACTaGGAACTGCCGCGGGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CTILLCTRGRLCLRRGIVLSLSD*ELPRER Trigger: GCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAG...AACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CAA 90 bp | TTTGTGTCTGAGACAGATTGGGTTGGGAGGACCCCCAGCCCAGCCTCCTCCAGTTTCGGCGTCGCTGTCTaGTCCCTCCTGGATGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FVSETDWVGRTPSPASSSFGVAV*SLLDAV Trigger: GACAGCATCCAGGAGGGACAAGACAGCGACGCCGAA...ACTGGAGGAGGCTGGGCTGGGGGTCCTCCCAACCCAATCTGTCTCAGACACAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS GCA 90 bp | TGCTGTCCTTGTCGGACTTGGAACTGCCGCGGGAGCGCTTCATATTaGGGAAATACTGTCCCCAGCGCTGCCGGCCAGCGTCTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CCPCRTWNCRGSASY*GNTVPSAAGQRLSS Trigger: TGAAGAAAGACGCTGGCCGGCAGCGCTGGGGACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS GCA 90 bp | CGCTGTCTTGTCCCTCCTGGATGCTGTCCTTGTCGGACTTGGAACTaGCGCGGGAGCGCTTCATATTGCGGAAATACTGTCCCCAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCLVPPGCCPCRTWN*RGSASYCGNTVPSA Trigger: AGCGCTGGGGACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS CCA 90 bp | ATGGTCTACTTCATCCAGCCAGGAAGCAGGGCTAGCAGGAAAGTCTaGGTAGCCAGAACTGCTCTCTGTGGACAGGTCGGAGCTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MVYFIQPGSRASRKV*VARTALCGQVGAGP Trigger: GGGCCCAGCTCCGACCTGTCCACAGAGAGCAGTTCTGGCTACCCAGACTTTCCTGCTAGCCCTGCTTCCTGGCTGGATGAAGTAGACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CAA 90 bp | GCACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTGGCATGCGGCGCACTaGGTCCCGAAGCGCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQFCFAPEGGCASEGELFWHAAH*VPKRLK Trigger: CTTTAAGCGCTTCGGGACCAAGTGCGCCGCATGCCA...GAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS CCA 90 bp | CAATGTCGGTCCAGAGCCTTAAGGATGAAACGGTCCAAGATGTGCTaGTCACAGCCTGCACACATCGGGATCTCTCGGCGCAGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QCRSRALRMKRSKMC*SQPAHIGISRRRSA Trigger: GGCTGACCTGCGCCGAGAGATCCCGATGTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTTCATCCTTAAGGCTCTGGACCGACATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028302.8 |
||
| CDS-3UTR CAA 90 bp | GAATGGACAGCATGGGATGGGGCTAGCCATCCACCCAGAGGCAGCACCAAGACCTGGCAGTCACTGCACTaGAGACACTTGCTGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EWTAWDGASHPPRGSTKTWQSLH*RHLLCQ Trigger: TTGGCACAGCAAGTGTCTCAAGTGCAGTGACTGCCA...GGTCTTGGTGCTGCCTCTGGGTGGATGGCTAGCCCCATCCCATGCTGTCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS-3UTR CAA 90 bp | GAGAGGTGTGCTCCCAGGTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTTGGCATGCGGCGCACTaGGTCCCGAAGCGCTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ERCAPRFCQWPGRTQAQSWHAAH*VPKRLK Trigger: CTTTAAGCGCTTCGGGACCAAGTGCGCCGCATGCCA...AGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAACCTGGGAGCACACCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
||
| CDS GCA 90 bp | TGCCAATGTCGGTCCAGAGCCTTAAGGATGAAACGGTCCAAGATGTaGTGGTCACAGCCTGCACACATCGGGATCTCTCGGCGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CQCRSRALRMKRSKM*WSQPAHIGISRRRS Trigger: TGACCTGCGCCGAGAGATCCCGATGTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTTCATCCTTAAGGCTCTGGACCGACATTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028302.8 |
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| CDS-3UTR CAA 90 bp | CAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCTCGCGGGAGCGCTTCATATaGCGGAAATACTGTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: QFCFAPEGGCASEGELFSRERFI*RKYCPQ Trigger: CTGGGGACAGTATTTCCGCAATATGAAGCGCTCCCG...CGAGAACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS-3UTR CAA 90 bp | CCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACTTCGGCGTCGCTGTCTaGTCCCTCCTGGATGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: PILSLGNPVLPSEVLGMDFGVAV*SLLDAV Trigger: GACAGCATCCAGGAGGGACAAGACAGCGACGCCGAA...GTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS-3UTR CAA 90 bp | CCAACACACGGCATTCCAGAACAGAATGATCTGGAGACTCCGGGGAGGGAGAGCGGGACAAGGCTCAAGTaGGTGTCTGGGTATACCAGG | + |
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Preference number: 5 (lower is better) Translates to: PTHGIPEQNDLETPGRESGTRLK*VSGYTR Trigger: CCTGGTATACCCAGACACCAACTTGAGCCTTGTCCC...GCTCTCCCTCCCCGGAGTCTCCAGATCATTCTGTTCTGGAATGCCGTGTGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS GCA 90 bp | TGCCAATGTCGGTCCAGAGCCTTAAGGATGAAACGGTCCAAGATGTaGTGGTCACAGCCTGCACACATCGGGATCTCTGGAGTCCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CQCRSRALRMKRSKM*WSQPAHIGISGVLL Trigger: CAGCAGGACTCCAGAGATCCCGATGTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTTCATCCTTAAGGCTCTGGACCGACATTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054099.16 |
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| CDS-3UTR CAA 90 bp | TGCACAATTCTGCTTTGCACCCGAGGGAGGCTGTGCCTCCGAAGGGGAATTGTTCGGGAGCGCTTCATATaGCGGAAATACTGTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: CTILLCTRGRLCLRRGIVRERFI*RKYCPQ Trigger: CTGGGGACAGTATTTCCGCAATATGAAGCGCTCCCG...AACAATTCCCCTTCGGAGGCACAGCCTCCCTCGGGTGCAAAGCAGAATTGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS GCA 90 bp | TCAGCCAGAGGGACGTGGCAGTCACTGCACTTGAGACACTTGCTGTaGCAATGTCGGTCCAGAGCCTTAAGGATGAAACGGTCCAAGATG | + |
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Preference number: 5 (lower is better) Translates to: SARGTWQSLHLRHLL*QCRSRALRMKRSKM Trigger: CATCTTGGACCGTTTCATCCTTAAGGCTCTGGACCGACATTGGCACAGCAAGTGTCTCAAGTGCAGTGACTGCCACGTCCCTCTGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CCA 90 bp | CAATGTCGGTCCAGAGCCTTAAGGATGAAACGGTCCAAGATGTGCTaGTCACAGCCTGCACACATCGGGATCTCTGGAGTCCTGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: QCRSRALRMKRSKMC*SQPAHIGISGVLLK Trigger: CTTCAGCAGGACTCCAGAGATCCCGATGTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTTCATCCTTAAGGCTCTGGACCGACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054099.16 |
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| CDS-3UTR CAA 90 bp | CCTATTCTCTCACTTGGGAACCCTGTCCTTCCCTCAGAGGTCCTTGGAATGGACGGGACAAGGCTCAAGTaGGTGTCTGGGTATACCAGG | + |
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Preference number: 5 (lower is better) Translates to: PILSLGNPVLPSEVLGMDGTRLK*VSGYTR Trigger: CCTGGTATACCCAGACACCAACTTGAGCCTTGTCCC...GTCCATTCCAAGGACCTCTGAGGGAAGGACAGGGTTCCCAAGTGAGAGAATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS-3UTR CAA 90 bp | GTTTTGTCAGTGGCCAGGAAGGACACAAGCACAGTCTCCTACCAAGCCCCATCATGGCAGTCACTGCACTaGAGACACTTGCTGTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: VLSVARKDTSTVSYQAPSWQSLH*RHLLCQ Trigger: TTGGCACAGCAAGTGTCTCAAGTGCAGTGACTGCCA...TGATGGGGCTTGGTAGGAGACTGTGCTTGTGTCCTTCCTGGCCACTGACAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS GCA 72 bp | AGTCCTGGGCGCGGCGCACCACCTGCGTGGGCGGGATaGCCAGCTGGCATGCGGCGCACTTGGTCCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SPGRGAPPAWAG*PAGMRRTWSRS Trigger: GCTTCGGGACCAAGTGCGCCGCATGCCAGCTGGGCATCCCGCCCACGCAGGTGGTGCGCCGCGCCCAGGACT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CCA 72 bp | GCGCGGCGCACCACCTGCGTGGGCGGGATGCCCAGCTaGCATGCGGCGCACTTGGTCCCGAAGCGCTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: ARRTTCVGGMPS*HAAHLVPKRLK Trigger: CTTTAAGCGCTTCGGGACCAAGTGCGCCGCATGCCAGCTGGGCATCCCGCCCACGCAGGTGGTGCGCCGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS GCA 72 bp | GCGCACCACCTGCGTGGGCGGGATGCCCAGCTGGCATaGGGCGCACTTGGTCCCGAAGCGCTTAAAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: AHHLRGRDAQLA*GALGPEALKEV Trigger: GACTTCTTTAAGCGCTTCGGGACCAAGTGCGCCGCATGCCAGCTGGGCATCCCGCCCACGCAGGTGGTGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS TCA 72 bp | AGCTCTCGGTACTGCTCTGGACCCGTCAAGCCTCCGTaGTCCAGGGTAAAGCTGCCCAGGCCTCCTACGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSRYCSGPVKPP*SRVKLPRPPTG Trigger: GCCCGTAGGAGGCCTGGGCAGCTTTACCCTGGATCACGGAGGCTTGACGGGTCCAGAGCAGTACCGAGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS TCA 72 bp | AGAAGTCGTCTTTGCAGTAGACGCTCTCCCCGCGGCTaGAGCAGCGCTCAGCCAGAGGGACGTGGCAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: RSRLCSRRSPRG*SSAQPEGRGSH Trigger: GTGACTGCCACGTCCCTCTGGCTGAGCGCTGCTTCAGCCGCGGGGAGAGCGTCTACTGCAAAGACGACTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS GCA 72 bp | TGTCGGACTTGGAACTGCCGCGGGAGCGCTTCATATTaGGGAAATACTGTCCCCAGCGCTGCCGGCCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: CRTWNCRGSASY*GNTVPSAAGQR Trigger: ACGCTGGCCGGCAGCGCTGGGGACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS GCA 72 bp | AGGAGACTTCGGCGTCGCTGTCTTGTCCCTCCTGGATaGTGTCCTTGTCGGACTTGGAACTGCCGCGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RRLRRRCLVPPG*CPCRTWNCRGS Trigger: GCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCGACGCCGAAGTCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CCA 72 bp | TCCCCGCGGCTGAAGCAGCGCTCAGCCAGAGGGACGTaGCAGTCACTGCACTTGAGACACTTGCTGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SPRLKQRSARGT*QSLHLRHLLCQ Trigger: TTGGCACAGCAAGTGTCTCAAGTGCAGTGACTGCCACGTCCCTCTGGCTGAGCGCTGCTTCAGCCGCGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CAA 72 bp | TGCGTGGGCGGGATGCCCAGCTGGCATGCGGCGCACTaGGTCCCGAAGCGCTTAAAGAAGTCGTCTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CVGGMPSWHAAH*VPKRLKKSSLQ Trigger: CTGCAAAGACGACTTCTTTAAGCGCTTCGGGACCAAGTGCGCCGCATGCCAGCTGGGCATCCCGCCCACGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CAA 72 bp | TTGTCGGACTTGGAACTGCCGCGGGAGCGCTTCATATaGCGGAAATACTGTCCCCAGCGCTGCCGGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: LSDLELPRERFI*RKYCPQRCRPA Trigger: CGCTGGCCGGCAGCGCTGGGGACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CCA 72 bp | GTGAAGGAGACTTCGGCGTCGCTGTCTTGTCCCTCCTaGATGCTGTCCTTGTCGGACTTGGAACTGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: VKETSASLSCPS*MLSLSDLELPR Trigger: CCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCGACGCCGAAGTCTCCTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CAA 72 bp | TCGGCGTCGCTGTCTTGTCCCTCCTGGATGCTGTCCTaGTCGGACTTGGAACTGCCGCGGGAGCGCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: SASLSCPSWMLS*SDLELPRERFI Trigger: TATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCGACGCCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CAA 90 bp | AGCCATGGACGGCTCATCAGTGAAGGAGACTTCGGCGTCGCTGTCTaGTCCCTCCTGGATGCTGTCCTTGTCGGACTTGGAACTGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SHGRLISEGDFGVAV*SLLDAVLVGLGTAA Trigger: CGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCGACGCCGAAGTCTCCTTCACTGATGAGCCGTCCATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS TCA 72 bp | AGCGCTCAGCCAGAGGGACGTGGCAGTCACTGCACTTaGGACACTTGCTGTGCCAATGTCGGTCCAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SAQPEGRGSHCT*DTCCANVGPEP Trigger: AGGCTCTGGACCGACATTGGCACAGCAAGTGTCTCAAGTGCAGTGACTGCCACGTCCCTCTGGCTGAGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CAA 90 bp | ATGCTGTCCTTGTCGGACTTGGAACTGCCGCGGGAGCGCTTCATATaGCGGAAATACTGTCCCCAGCGCTGCCGGCCAGCGTCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: MLSLSDLELPRERFI*RKYCPQRCRPASFF Trigger: GAAGAAAGACGCTGGCCGGCAGCGCTGGGGACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CAA 90 bp | TCGGCGTCGCTGTCTTGTCCCTCCTGGATGCTGTCCTTGTCGGACTaGGAACTGCCGCGGGAGCGCTTCATATTGCGGAAATACTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SASLSCPSWMLSLSD*ELPRERFILRKYCP Trigger: GGGACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCGACGCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CAA 90 bp | CAGCGCTCAGCCAGAGGGACGTGGCAGTCACTGCACTTGAGACACTaGCTGTGCCAATGTCGGTCCAGAGCCTTAAGGATGAAACGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QRSARGTWQSLHLRH*LCQCRSRALRMKRS Trigger: GGACCGTTTCATCCTTAAGGCTCTGGACCGACATTGGCACAGCAAGTGTCTCAAGTGCAGTGACTGCCACGTCCCTCTGGCTGAGCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CAA 90 bp | AAGGAGACTTCGGCGTCGCTGTCTTGTCCCTCCTGGATGCTGTCCTaGTCGGACTTGGAACTGCCGCGGGAGCGCTTCATATTGCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: KETSASLSCPSWMLS*SDLELPRERFILRK Trigger: TTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGACAAGACAGCGACGCCGAAGTCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS GCA 72 bp | CGGTCCAGAGCCTTAAGGATGAAACGGTCCAAGATGTaGTGGTCACAGCCTGCACACATCGGGATCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: RSRALRMKRSKM*WSQPAHIGISR Trigger: CCGAGAGATCCCGATGTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTTCATCCTTAAGGCTCTGGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028302.8 |
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| CDS GCA 72 bp | GTCCCTCCTGGATGCTGTCCTTGTCGGACTTGGAACTaGCGCGGGAGCGCTTCATATTGCGGAAATACTGTC | + |
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Preference number: 6 (lower is better) Translates to: VPPGCCPCRTWN*RGSASYCGNTV Trigger: GACAGTATTTCCGCAATATGAAGCGCTCCCGCGGCAGTTCCAAGTCCGACAAGGACAGCATCCAGGAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS CCA 72 bp | TCCAGAGCCTTAAGGATGAAACGGTCCAAGATGTGCTaGTCACAGCCTGCACACATCGGGATCTCTCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SRALRMKRSKMC*SQPAHIGISRR Trigger: GCGCCGAGAGATCCCGATGTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTTCATCCTTAAGGCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028302.8 |
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| CDS CCA 72 bp | TTCATCCAGCCAGGAAGCAGGGCTAGCAGGAAAGTCTaGGTAGCCAGAACTGCTCTCTGTGGACAGGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: FIQPGSRASRKV*VARTALCGQVG Trigger: TCCGACCTGTCCACAGAGAGCAGTTCTGGCTACCCAGACTTTCCTGCTAGCCCTGCTTCCTGGCTGGATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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| CDS GCA 72 bp | CGGTCCAGAGCCTTAAGGATGAAACGGTCCAAGATGTaGTGGTCACAGCCTGCACACATCGGGATCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RSRALRMKRSKM*WSQPAHIGISG Trigger: TCCAGAGATCCCGATGTGTGCAGGCTGTGACCAGCACATCTTGGACCGTTTCATCCTTAAGGCTCTGGACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054099.16 |
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| CDS GCA 72 bp | GAGCGCTTCATATTGCGGAAATACTGTCCCCAGCGCTaGCGGCCAGCGTCTTTCTTCAGTCTCTTTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: ERFILRKYCPQR*RPASFFSLFSL Trigger: TAAGGAAAAGAGACTGAAGAAAGACGCTGGCCGGCAGCGCTGGGGACAGTATTTCCGCAATATGAAGCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028302.8 ENSMUST00000054099.16 |
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