Pregenerated sensors for LHPP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030946Ensembl transcript IDs: ENSMUST00000033241.6, ENSMUST00000106170.8, ENSMUST00000133969.8, ENSMUST00000148669.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGGGGAACAAACCTCTGCCCAGACGCTAGGGAGGGAGGAATGTTaGCAAGGAGTCCGCAGAGGGTGGGTGAAGGGGATGGCTGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GGEQTSAQTLGREEC*QGVRRGWVKGMAGS Trigger: AGAGCCAGCCATCCCCTTCACCCACCCTCTGCGGACTCCTTGTCAACATTCCTCCCTCCCTAGCGTCTGGGCAGAGGTTTGTTCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CCA 90 bp | CCTAAGACAGGGGTTGGAGGCAGAGTGCTGATCAGTCATTCTGACTaGGGCCAGATAGGGCTATGGGTGGTGGGCAGGCTGGCTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PKTGVGGRVLISHSD*GQIGLWVVGRLAQL Trigger: GAGCTGAGCCAGCCTGCCCACCACCCATAGCCCTATCTGGCCCCAGTCAGAATGACTGATCAGCACTCTGCCTCCAACCCCTGTCTTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CCA 90 bp | ATCCTCCCGAAGAGCGCCAGGCAGAGCGCTGGTCAGCAGACGACATaGCTGTCTGCTGCTGTAATGTCCCTACTCAGGCTGATCCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: ILPKSARQSAGQQTT*LSAAVMSLLRLIRL Trigger: GAGACGGATCAGCCTGAGTAGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCAGCGCTCTGCCTGGCGCTCTTCGGGAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| 3UTR CCA 90 bp | GGCAGAGTGCTGATCAGTCATTCTGACTGGGGCCAGATAGGGCTATaGGTGGTGGGCAGGCTGGCTCAGCTCTGTGGTTTCTGTAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GRVLISHSDWGQIGL*VVGRLAQLCGFCRL Trigger: GAGCCTACAGAAACCACAGAGCTGAGCCAGCCTGCCCACCACCCATAGCCCTATCTGGCCCCAGTCAGAATGACTGATCAGCACTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CCA 90 bp | CACAGCCTCCGCAAGGTTGTCCACGTACCCATCTGCCTGTACTTCTaGATGATGCTCATCACCAGGCCTGGTGGGCTTCCACCCCTATGG | + |
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Preference number: 1 (lower is better) Translates to: HSLRKVVHVPICLYF*MMLITRPGGLPPLW Trigger: CCATAGGGGTGGAAGCCCACCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCTTGCGGAGGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR CCA 90 bp | CTGGTGCCCTGGAAGTATGTGGGAAGAGGGCACAGTGATGGAGTATaGGAGCAGGGGTGCCCTTGTCCACTGTCTCTGAAGGCTGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: LVPWKYVGRGHSDGV*EQGCPCPLSLKAGH Trigger: GTGACCAGCCTTCAGAGACAGTGGACAAGGGCACCCCTGCTCCCATACTCCATCACTGTGCCCTCTTCCCACATACTTCCAGGGCACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR GCA 90 bp | CAGCAGCAGATCCACAGCCTCCGCAAGGTTGTCCACGTACCCATCTaGCTGTACTTCTGGATGATGCTCATCACCAGGCCTGGTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: QQQIHSLRKVVHVPI*LYFWMMLITRPGGL Trigger: AAGCCCACCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCTTGCGGAGGCTGTGGATCTGCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR CCA 90 bp | GGAACAAGCACCCTAGAACTTCTAGCATCTGTCCTGGCAAAGCCTTaGGTGGCCTGGTGCCCTGGAAGTATGTGGGAAGAGGGCACAGTG | + |
|
Preference number: 1 (lower is better) Translates to: GTSTLELLASVLAKP*VAWCPGSMWEEGTV Trigger: CACTGTGCCCTCTTCCCACATACTTCCAGGGCACCAGGCCACCCAAGGCTTTGCCAGGACAGATGCTAGAAGTTCTAGGGTGCTTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CCA 90 bp | GGAATGTTGACAAGGAGTCCGCAGAGGGTGGGTGAAGGGGATGGCTaGCTCTGGCCCAGGAACAAGCACCCTAGAACTTCTAGCATCTGT | + |
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Preference number: 1 (lower is better) Translates to: GMLTRSPQRVGEGDG*LWPRNKHPRTSSIC Trigger: ACAGATGCTAGAAGTTCTAGGGTGCTTGTTCCTGGGCCAGAGCCAGCCATCCCCTTCACCCACCCTCTGCGGACTCCTTGTCAACATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR TCA 90 bp | TCAAGGGCCTGCAAGTCCAAGCAGGAAAGTCGAGAAGGAACTGAGTaGCTTCATGTTCTCGCCAAACATCCTCCCGAAGAGCGCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SRACKSKQESREGTE*LHVLAKHPPEERQA Trigger: TGCCTGGCGCTCTTCGGGAGGATGTTTGGCGAGAACATGAAGTCACTCAGTTCCTTCTCGACTTTCCTGCTTGGACTTGCAGGCCCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| 3UTR CCA 90 bp | CGTACCCATCTGCCTGTACTTCTGGATGATGCTCATCACCAGGCCTaGTGGGCTTCCACCCCTATGGCTTGTAGAGCAGACTTGAAGAAC | + |
|
Preference number: 1 (lower is better) Translates to: RTHLPVLLDDAHHQA*WASTPMACRADLKN Trigger: GTTCTTCAAGTCTGCTCTACAAGCCATAGGGGTGGAAGCCCACCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR CCA 90 bp | ACCCATCTGCCTGTACTTCTGGATGATGCTCATCACCAGGCCTGGTaGGCTTCCACCCCTATGGCTTGTAGAGCAGACTTGAAGAACTCA | + |
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Preference number: 1 (lower is better) Translates to: THLPVLLDDAHHQAW*ASTPMACRADLKNS Trigger: TGAGTTCTTCAAGTCTGCTCTACAAGCCATAGGGGTGGAAGCCCACCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR CCA 90 bp | GCTGAAGCACCCCCACCAGCTCTCTCAGGGATTTCTGGGACTCATTaGTACAGAACCTCACTTTCAGCGGGGACTGTTTCAGTCTATGTT | + |
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Preference number: 1 (lower is better) Translates to: AEAPPPALSGISGTH*YRTSLSAGTVSVYV Trigger: AACATAGACTGAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACCAATGAGTCCCAGAAATCCCTGAGAGAGCTGGTGGGGGTGCTTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
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| 3UTR CCA 90 bp | GGACTTAGTTTCAGAGGGACCTTTCAGCCCAAGGGTTTCATTTTCTaGAGGCCTGACAGGTCTCTTTCACCTTCTTGGATGTCATTAGGG | + |
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Preference number: 1 (lower is better) Translates to: GLSFRGTFQPKGFIF*RPDRSLSPSWMSLG Trigger: CCCTAATGACATCCAAGAAGGTGAAAGAGACCTGTCAGGCCTCCAGAAAATGAAACCCTTGGGCTGAAAGGTCCCTCTGAAACTAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR TCA 90 bp | TTTCAGAGGGACCTTTCAGCCCAAGGGTTTCATTTTCTGGAGGCCTaGCAGGTCTCTTTCACCTTCTTGGATGTCATTAGGGGAAACATG | + |
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Preference number: 1 (lower is better) Translates to: FQRDLSAQGFHFLEA*QVSFTFLDVIRGNM Trigger: CATGTTTCCCCTAATGACATCCAAGAAGGTGAAAGAGACCTGTCAGGCCTCCAGAAAATGAAACCCTTGGGCTGAAAGGTCCCTCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR TCA 90 bp | GGTACAGAACCTCACTTTCAGCGGGGACTGTTTCAGTCTATGTTATaGAACTTCAAGCGTTGGCTGACATTACAAAACAGACAACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: GTEPHFQRGLFQSML*NFKRWLTLQNRQPR Trigger: TCTGGGTTGTCTGTTTTGTAATGTCAGCCAACGCTTGAAGTTTCATAACATAGACTGAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
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| 3UTR CAA 90 bp | GGGAGGGGAACAAACCTCTGCCCAGACGCTAGGGAGGGAGGAATGTaGACAAGGAGTCCGCAGAGGGTGGGTGAAGGGGATGGCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GRGTNLCPDAREGGM*TRSPQRVGEGDGWL Trigger: GAGCCAGCCATCCCCTTCACCCACCCTCTGCGGACTCCTTGTCAACATTCCTCCCTCCCTAGCGTCTGGGCAGAGGTTTGTTCCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGACTGGGGCCAGATAGGGCTATGGGTGGTGGGCAGGCTGGCTCAGCTCTGTTGGCAAAGCCTTGGGTaGCCTGGTGCCCTGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SDWGQIGLWVVGRLAQLCWQSLG*PGALEV Trigger: TACTTCCAGGGCACCAGGCCACCCAAGGCTTTGCCA...ACAGAGCTGAGCCAGCCTGCCCACCACCCATAGCCCTATCTGGCCCCAGTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGGCAGGCTGGCTCAGCTCTGTGGTTTCTGTAGGCTCCTCTCATTCAGAGGGGAGGGAGGAATGTTaGCAAGGAGTCCGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: WWAGWLSSVVSVGSSHSEGREEC*QGVRRG Trigger: CCCTCTGCGGACTCCTTGTCAACATTCCTCCCTCCC...CTCTGAATGAGAGGAGCCTACAGAAACCACAGAGCTGAGCCAGCCTGCCCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR TCA 90 bp | TTGAAGAACTCAGGGGAGGGTTTCCCCACCACTTCAGCCTTGATACCACAGGCAGGGAAGAGGGCACAGTaGTGGAGTATGGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LKNSGEGFPTTSALIPQAGKRAQ*WSMGAG Trigger: CCCTGCTCCCATACTCCATCACTGTGCCCTCTTCCC...TGCCTGTGGTATCAAGGCTGAAGTGGTGGGGAAACCCTCCCCTGAGTTCTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGCTCTGTGGTTTCTGTAGGCTCCTCTCATTCAGAGAGTTCATCGAGGAGGTCCTGGCAAAGCCTTaGGTGGCCTGGTGCCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: AQLCGFCRLLSFREFIEEVLAKP*VAWCPG Trigger: TCCAGGGCACCAGGCCACCCAAGGCTTTGCCAGGAC...CTCCTCGATGAACTCTCTGAATGAGAGGAGCCTACAGAAACCACAGAGCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | GTGACTAAAGGAGTTCAGGGACTTAGTTTCAGAGGGACCTTTCAGCCCAAGGGTGGAGTCCGCAGAGGGTaGGTGAAGGGGATGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: VTKGVQGLSFRGTFQPKGGVRRG*VKGMAG Trigger: GCCAGCCATCCCCTTCACCCACCCTCTGCGGACTCC...ACCCTTGGGCTGAAAGGTCCCTCTGAAACTAAGTCCCTGAACTCCTTTAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGCTCTGTGGTTTCTGTAGGCTCCTCTCATTCAGAGAGTTCATCGAGGAGGGGAAGAGGGCACAGTaGTGGAGTATGGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: AQLCGFCRLLSFREFIEEGKRAQ*WSMGAG Trigger: CCCTGCTCCCATACTCCATCACTGTGCCCTCTTCCC...CTCCTCGATGAACTCTCTGAATGAGAGGAGCCTACAGAAACCACAGAGCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGGCAGGCTGGCTCAGCTCTGTGGTTTCTGTAGGCTCCTCTCATTCAGAGACCACGTGCCAAAGGTaGCTAAAGGAGTTCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: WWAGWLSSVVSVGSSHSETTCQR*LKEFRD Trigger: GTCCCTGAACTCCTTTAGTCACCTTTGGCACGTGGT...CTCTGAATGAGAGGAGCCTACAGAAACCACAGAGCTGAGCCAGCCTGCCCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | GATCCACAGCCTCCGCAAGGTTGTCCACGTACCCATCTGCCTGTACTTCTGGATTGCCCTGGAAGTATGTaGGAAGAGGGCACAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: DPQPPQGCPRTHLPVLLDCPGSM*EEGTVM Trigger: CATCACTGTGCCCTCTTCCCACATACTTCCAGGGCA...ATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCTTGCGGAGGCTGTGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGAGAGTTATCCCAGCCTGTTTCCTAAGACAGGGGTTGGAGGCAGAGTGCTGCCCTGGAAGTATGTaGGAAGAGGGCACAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: FLRVIPACFLRQGLEAECCPGSM*EEGTVM Trigger: CATCACTGTGCCCTCTTCCCACATACTTCCAGGGCA...GCACTCTGCCTCCAACCCCTGTCTTAGGAAACAGGCTGGGATAACTCTCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCTCATTCAGAGAGTTCATCGAGGAGGCAGTGCATCTCATCCAATTGGATGGTGGCCTGGTGCCCTaGAAGTATGTGGGAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLSFREFIEEAVHLIQLDGGLVP*KYVGRG Trigger: CCCTCTTCCCACATACTTCCAGGGCACCAGGCCACC...ATCCAATTGGATGAGATGCACTGCCTCCTCGATGAACTCTCTGAATGAGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGCAGGGGCAGTCACCTCTTCTTCTGAGATGTCAAACCCCAGCTGCTGAAAGGAGAAAGAAAGAGTaGGCTGCTCTGGTTCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LVQGQSPLLLRCQTPAAERRKKE*AALVLV Trigger: AACCAGAACCAGAGCAGCGCACTCTTTCTTTCTCCT...TTCAGCAGCTGGGGTTTGACATCTCAGAAGAAGAGGTGACTGCCCCTGCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCATTCAGAGAGTTCATCGAGGAGGCAGTGCATCTCATCCAATTGGATGGCACAGTGATGGAGTATaGGAGCAGGGGTGCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: PLIQRVHRGGSASHPIGWHSDGV*EQGCPC Trigger: ACAAGGGCACCCCTGCTCCCATACTCCATCACTGTG...CCATCCAATTGGATGAGATGCACTGCCTCCTCGATGAACTCTCTGAATGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGTGCTGATCAGTCATTCTGACTGGGGCCAGATAGGGCTATGGGTGGTGAAGGGTTTCATTTTCTaGAGGCCTGACAGGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: GRVLISHSDWGQIGLWVVKGFIF*RPDRSL Trigger: AAGAGACCTGTCAGGCCTCCAGAAAATGAAACCCTT...CACCACCCATAGCCCTATCTGGCCCCAGTCAGAATGACTGATCAGCACTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCTGGAGGCCTGACAGGTCTCTTTCACCTTCTTGGATGTCATTAGGGGAAGTATGGGAGCAGGGGTaGCCTTGTCCACTGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: IFWRPDRSLSPSWMSLGEVWEQG*PCPLSL Trigger: CAGAGACAGTGGACAAGGGCACCCCTGCTCCCATAC...TTCCCCTAATGACATCCAAGAAGGTGAAAGAGACCTGTCAGGCCTCCAGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | ATTTTCTGGAGGCCTGACAGGTCTCTTTCACCTTCTTGGATGTCATTAGGGGAAAAGCCTTGGGTGGCCTaGTGCCCTGGAAGTATGTGG | + |
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Preference number: 2 (lower is better) Translates to: IFWRPDRSLSPSWMSLGEKPWVA*CPGSMW Trigger: CCACATACTTCCAGGGCACCAGGCCACCCAAGGCTT...TTCCCCTAATGACATCCAAGAAGGTGAAAGAGACCTGTCAGGCCTCCAGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCTCATTCAGAGAGTTCATCGAGGAGGCAGTGCATCTCATCCAATTGGATTCATTAGGGGAAACATaGCATGGGCCAGGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LLSFREFIEEAVHLIQLDSLGET*HGPGRG Trigger: TCCCCTCCCTGGCCCATGCCATGTTTCCCCTAATGA...ATCCAATTGGATGAGATGCACTGCCTCCTCGATGAACTCTCTGAATGAGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | GTAACCTCCAACGTCCAGCATCAGGCCAGAGGTCTCCTTGTAATAGCGTCCTTTAGCTCCATTAGCACCTaGAAGGCTCTGTTCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: VTSNVQHQARGLLVIASFSSIST*KALFMF Trigger: GAACATGAACAGAGCCTTCCAGGTGCTAATGGAGCT...AAAGGACGCTATTACAAGGAGACCTCTGGCCTGATGCTGGACGTTGGAGGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR CAA 90 bp | AAGTCTGTCCATCCCAACTCTAAGGAGCTTTCTGTGCCTTCAGTCTaGACTGTAGAGGTGGACATTTCTCTCTGTGGGAGGGTACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KSVHPNSKELSVPSV*TVEVDISLCGRVLF Trigger: GAAGAGTACCCTCCCACAGAGAGAAATGTCCACCTCTACAGTCAAGACTGAAGGCACAGAAAGCTCCTTAGAGTTGGGATGGACAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR-3UTR CCA 90 bp | TTGGTACAGAACCTCACTTTCAGCGGGGACTGTTTCAGTCTATGTTATGAAACTGCGCTGCTCTGGTTCTaGTTCATGCCCTCCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: LVQNLTFSGDCFSLCYETALLWF*FMPSPS Trigger: TGATGGGGAGGGCATGAACCAGAACCAGAGCAGCGC...AGTTTCATAACATAGACTGAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACTCATTGGTACAGAACCTCACTTTCAGCGGGGACTGTTTCAGTCTATGTTAAAGAAAGAGTGCGCTaGTCTGGTTCTGGTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: GTHWYRTSLSAGTVSVYVKERVR*SGSGSC Trigger: GCATGAACCAGAACCAGAGCAGCGCACTCTTTCTTT...AACATAGACTGAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACCAATGAGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTACAGAACCTCACTTTCAGCGGGGACTGTTTCAGTCTATGTTATGAAACTAAGAGTGCGCTGCTCTaGTTCTGGTTCATGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LVQNLTFSGDCFSLCYETKSALL*FWFMPS Trigger: GGAGGGCATGAACCAGAACCAGAGCAGCGCACTCTT...AGTTTCATAACATAGACTGAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
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| 3UTR CAA 90 bp | CTCTCATTCAGAGAGTTCATCGAGGAGGCAGTGCATCTCATCCAATaGGATGGTCAATTAAAGGACCACGTGCCAAAGGTGACTAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LSFREFIEEAVHLIQ*DGQLKDHVPKVTKG Trigger: TCCTTTAGTCACCTTTGGCACGTGGTCCTTTAATTGACCATCCAATTGGATGAGATGCACTGCCTCCTCGATGAACTCTCTGAATGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CCA 72 bp | GGGGTTGGAGGCAGAGTGCTGATCAGTCATTCTGACTaGGGCCAGATAGGGCTATGGGTGGTGGGCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GVGGRVLISHSD*GQIGLWVVGRL Trigger: CAGCCTGCCCACCACCCATAGCCCTATCTGGCCCCAGTCAGAATGACTGATCAGCACTCTGCCTCCAACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR TCA 72 bp | CAAACCTCTGCCCAGACGCTAGGGAGGGAGGAATGTTaGCAAGGAGTCCGCAGAGGGTGGGTGAAGGGGATG | + |
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Preference number: 3 (lower is better) Translates to: QTSAQTLGREEC*QGVRRGWVKGM Trigger: CATCCCCTTCACCCACCCTCTGCGGACTCCTTGTCAACATTCCTCCCTCCCTAGCGTCTGGGCAGAGGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CCA 72 bp | AGTCCGCAGAGGGTGGGTGAAGGGGATGGCTGGCTCTaGCCCAGGAACAAGCACCCTAGAACTTCTAGCATC | + |
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Preference number: 3 (lower is better) Translates to: SPQRVGEGDGWL*PRNKHPRTSSI Trigger: GATGCTAGAAGTTCTAGGGTGCTTGTTCCTGGGCCAGAGCCAGCCATCCCCTTCACCCACCCTCTGCGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CCA 72 bp | ACAAGGAGTCCGCAGAGGGTGGGTGAAGGGGATGGCTaGCTCTGGCCCAGGAACAAGCACCCTAGAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: TRSPQRVGEGDG*LWPRNKHPRTS Trigger: AGAAGTTCTAGGGTGCTTGTTCCTGGGCCAGAGCCAGCCATCCCCTTCACCCACCCTCTGCGGACTCCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CCA 72 bp | AAGAGCGCCAGGCAGAGCGCTGGTCAGCAGACGACATaGCTGTCTGCTGCTGTAATGTCCCTACTCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: KSARQSAGQQTT*LSAAVMSLLRL Trigger: CAGCCTGAGTAGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCAGCGCTCTGCCTGGCGCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| 3UTR TCA 72 bp | AGGTTGTCCACGTACCCATCTGCCTGTACTTCTGGATaGTGCTCATCACCAGGCCTGGTGGGCTTCCACCCC | + |
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Preference number: 3 (lower is better) Translates to: RLSTYPSACTSG*CSSPGLVGFHP Trigger: GGGGTGGAAGCCCACCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR GCA 72 bp | CTAGCATCTGTCCTGGCAAAGCCTTGGGTGGCCTGGTaGCCTGGAAGTATGTGGGAAGAGGGCACAGTGATG | + |
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Preference number: 3 (lower is better) Translates to: LASVLAKPWVAW*PGSMWEEGTVM Trigger: CATCACTGTGCCCTCTTCCCACATACTTCCAGGGCACCAGGCCACCCAAGGCTTTGCCAGGACAGATGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR GCA 72 bp | GGAAGAGGGCACAGTGATGGAGTATGGGAGCAGGGGTaGCCTTGTCCACTGTCTCTGAAGGCTGGTCACTTG | + |
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Preference number: 3 (lower is better) Translates to: GRGHSDGVWEQG*PCPLSLKAGHL Trigger: CAAGTGACCAGCCTTCAGAGACAGTGGACAAGGGCACCCCTGCTCCCATACTCCATCACTGTGCCCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| 3UTR CCA 72 bp | CTGATCAGTCATTCTGACTGGGGCCAGATAGGGCTATaGGTGGTGGGCAGGCTGGCTCAGCTCTGTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LISHSDWGQIGL*VVGRLAQLCGF Trigger: GAAACCACAGAGCTGAGCCAGCCTGCCCACCACCCATAGCCCTATCTGGCCCCAGTCAGAATGACTGATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR CCA 72 bp | GGAGCAGGGGTGCCCTTGTCCACTGTCTCTGAAGGCTaGTCACTTGTCCGTGTACTTCAGCAGCAGATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GAGVPLSTVSEG*SLVRVLQQQIH Trigger: GTGGATCTGCTGCTGAAGTACACGGACAAGTGACCAGCCTTCAGAGACAGTGGACAAGGGCACCCCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCGTGTACTTCAGCAGCAGATCCACAGCCTCCGCAAGGTTGTCCACGTACCCCCACCACTTCAGCCTaGATACCACAGGCATACTCG | + |
|
Preference number: 3 (lower is better) Translates to: CPCTSAADPQPPQGCPRTPTTSA*IPQAYS Trigger: CGAGTATGCCTGTGGTATCAAGGCTGAAGTGGTGGG...GGTACGTGGACAACCTTGCGGAGGCTGTGGATCTGCTGCTGAAGTACACGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
||
| 3UTR TCA 72 bp | GAGTATGGGAGCAGGGGTGCCCTTGTCCACTGTCTCTaGAGGCTGGTCACTTGTCCGTGTACTTCAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: EYGSRGALVHCL*RLVTCPCTSAA Trigger: TGCTGCTGAAGTACACGGACAAGTGACCAGCCTTCAGAGACAGTGGACAAGGGCACCCCTGCTCCCATACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
||
| 3UTR CCA 72 bp | ATCTGTCCTGGCAAAGCCTTGGGTGGCCTGGTGCCCTaGAAGTATGTGGGAAGAGGGCACAGTGATGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ICPGKALGGLVP*KYVGRGHSDGV Trigger: TACTCCATCACTGTGCCCTCTTCCCACATACTTCCAGGGCACCAGGCCACCCAAGGCTTTGCCAGGACAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR CCA 72 bp | CTGCCTGTACTTCTGGATGATGCTCATCACCAGGCCTaGTGGGCTTCCACCCCTATGGCTTGTAGAGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPVLLDDAHHQA*WASTPMACRAD Trigger: GTCTGCTCTACAAGCCATAGGGGTGGAAGCCCACCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGATGTCATTAGGGGAAACATGGCATGGGCCAGGGAGGGGAACAAACCTCTGAGGGAGGGAGGAATGTaGACAAGGAGTCCGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LDVIRGNMAWAREGNKPLREGGM*TRSPQR Trigger: CCTCTGCGGACTCCTTGTCAACATTCCTCCCTCCCT...CAGAGGTTTGTTCCCCTCCCTGGCCCATGCCATGTTTCCCCTAATGACATCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR GCA 72 bp | ATCCACAGCCTCCGCAAGGTTGTCCACGTACCCATCTaGCTGTACTTCTGGATGATGCTCATCACCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: IHSLRKVVHVPI*LYFWMMLITRP Trigger: AGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCTTGCGGAGGCTGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
||
| 3UTR CCA 72 bp | TGGAAGTATGTGGGAAGAGGGCACAGTGATGGAGTATaGGAGCAGGGGTGCCCTTGTCCACTGTCTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: WKYVGRGHSDGV*EQGCPCPLSLK Trigger: CTTCAGAGACAGTGGACAAGGGCACCCCTGCTCCCATACTCCATCACTGTGCCCTCTTCCCACATACTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000133969.8 |
||
| 3UTR CCA 72 bp | TTCACCTTCTTGGATGTCATTAGGGGAAACATGGCATaGGCCAGGGAGGGGAACAAACCTCTGCCCAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: FTFLDVIRGNMA*AREGNKPLPRR Trigger: GCGTCTGGGCAGAGGTTTGTTCCCCTCCCTGGCCCATGCCATGTTTCCCCTAATGACATCCAAGAAGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR CCA 72 bp | CCTGTACTTCTGGATGATGCTCATCACCAGGCCTGGTaGGCTTCCACCCCTATGGCTTGTAGAGCAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: PVLLDDAHHQAW*ASTPMACRADL Trigger: CAAGTCTGCTCTACAAGCCATAGGGGTGGAAGCCCACCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
||
| 3UTR TCA 72 bp | AGAACTCAGGGGAGGGTTTCCCCACCACTTCAGCCTTaGTACCACAGGCATACTCGAGCGCCTTCATGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: RTQGRVSPPLQP*YHRHTRAPSCN Trigger: GTTACATGAAGGCGCTCGAGTATGCCTGTGGTATCAAGGCTGAAGTGGTGGGGAAACCCTCCCCTGAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
||
| 3UTR GCA 72 bp | AGACAACCCAGAATCCAGGAGAAAGAAAGAGTGCGCTaGTCTGGTTCTGGTTCATGCCCTCCCCATCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: RQPRIQEKERVR*SGSGSCPPHHG Trigger: GCCATGATGGGGAGGGCATGAACCAGAACCAGAGCAGCGCACTCTTTCTTTCTCCTGGATTCTGGGTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
||
| 3UTR CCA 72 bp | CCCCCACCAGCTCTCTCAGGGATTTCTGGGACTCATTaGTACAGAACCTCACTTTCAGCGGGGACTGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PPPALSGISGTH*YRTSLSAGTVS Trigger: TGAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACCAATGAGTCCCAGAAATCCCTGAGAGAGCTGGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
||
| 3UTR CCA 72 bp | TCTCTTTCACCTTCTTGGATGTCATTAGGGGAAACATaGCATGGGCCAGGGAGGGGAACAAACCTCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLSPSWMSLGET*HGPGRGTNLCP Trigger: TGGGCAGAGGTTTGTTCCCCTCCCTGGCCCATGCCATGTTTCCCCTAATGACATCCAAGAAGGTGAAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGAGTGCTGATCAGTCATTCTGACTGGGGCCAGATAGGGCTATGGGTGGTGGTGCATCTCATCCAATaGGATGGTCAATTAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GRVLISHSDWGQIGLWVVVHLIQ*DGQLKD Trigger: GTCCTTTAATTGACCATCCAATTGGATGAGATGCAC...CACCACCCATAGCCCTATCTGGCCCCAGTCAGAATGACTGATCAGCACTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR CCA 72 bp | ATTTTCTGGAGGCCTGACAGGTCTCTTTCACCTTCTTaGATGTCATTAGGGGAAACATGGCATGGGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IFWRPDRSLSPS*MSLGETWHGPG Trigger: CCCTGGCCCATGCCATGTTTCCCCTAATGACATCCAAGAAGGTGAAAGAGACCTGTCAGGCCTCCAGAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR TCA 72 bp | TGCAAGTCCAAGCAGGAAAGTCGAGAAGGAACTGAGTaGCTTCATGTTCTCGCCAAACATCCTCCCGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CKSKQESREGTE*LHVLAKHPPEE Trigger: CTCTTCGGGAGGATGTTTGGCGAGAACATGAAGTCACTCAGTTCCTTCTCGACTTTCCTGCTTGGACTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| 3UTR CCA 72 bp | TTCAGAGGGACCTTTCAGCCCAAGGGTTTCATTTTCTaGAGGCCTGACAGGTCTCTTTCACCTTCTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: FRGTFQPKGFIF*RPDRSLSPSWM Trigger: CATCCAAGAAGGTGAAAGAGACCTGTCAGGCCTCCAGAAAATGAAACCCTTGGGCTGAAAGGTCCCTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTGTCCACGTACCCATCTGCCTGTACTTCTGGATGATGCTCATCACCAGGCAATCACCACACAGTTaGGGTTGGACATATCGATGT | + |
|
Preference number: 3 (lower is better) Translates to: KVVHVPICLYFWMMLITRQSPHS*GWTYRC Trigger: ACATCGATATGTCCAACCCAAACTGTGTGGTGATTG...CCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
||
| 3UTR CCA 72 bp | TTCAGTCTTGACTGTAGAGGTGGACATTTCTCTCTGTaGGAGGGTACTCTTCAGTTTCCTGAGAGTTATCCC | + |
|
Preference number: 3 (lower is better) Translates to: FSLDCRGGHFSL*EGTLQFPESYP Trigger: GGGATAACTCTCAGGAAACTGAAGAGTACCCTCCCACAGAGAGAAATGTCCACCTCTACAGTCAAGACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR TCA 72 bp | CCTCACTTTCAGCGGGGACTGTTTCAGTCTATGTTATaGAACTTCAAGCGTTGGCTGACATTACAAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PHFQRGLFQSML*NFKRWLTLQNR Trigger: TCTGTTTTGTAATGTCAGCCAACGCTTGAAGTTTCATAACATAGACTGAAACAGTCCCCGCTGAAAGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
||
| 3UTR TCA 72 bp | TGTTTCAGTCTATGTTATGAAACTTCAAGCGTTGGCTaGCATTACAAAACAGACAACCCAGAATCCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CFSLCYETSSVG*HYKTDNPESRR Trigger: TCTCCTGGATTCTGGGTTGTCTGTTTTGTAATGTCAGCCAACGCTTGAAGTTTCATAACATAGACTGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGGTGGGTGAAGGGGATGGCTGGCTCTGGCCCAGGAACAAGCACCCTAGAACGCTCCTTCAGGATCTaGCAGGTGGCTGGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGWVKGMAGSGPGTSTLERSFRI*QVAGAG Trigger: CCCTGCACCAGCCACCTGCCAGATCCTGAAGGAGCG...TTCTAGGGTGCTTGTTCCTGGGCCAGAGCCAGCCATCCCCTTCACCCACCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGAGGGCACAGTGATGGAGTATGGGAGCAGGGGTGCCCTTGTCCACTGTGATCTGGCAGGTGGCTaGTGCAGGGGCAGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: WEEGTVMEYGSRGALVHCDLAGG*CRGSHL Trigger: GAGGTGACTGCCCCTGCACCAGCCACCTGCCAGATC...ACAGTGGACAAGGGCACCCCTGCTCCCATACTCCATCACTGTGCCCTCTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGAGCGCTGGTCAGCAGACGACATGGCTGTCTGCTGCTGTAATGTCCCTTCAAACCCCAGCTGCTaGAGCACCCCCACCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAERWSADDMAVCCCNVPSNPSC*STPTSS Trigger: AGAGCTGGTGGGGGTGCTTCAGCAGCTGGGGTTTGA...AGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCAGCGCTCTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGGCAGGCTGGCTCAGCTCTGTGGTTTCTGTAGGCTCCTCTCATTCAGAGTCAAACCCCAGCTGCTaGAGCACCCCCACCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WWAGWLSSVVSVGSSHSESNPSC*STPTSS Trigger: AGAGCTGGTGGGGGTGCTTCAGCAGCTGGGGTTTGA...CTCTGAATGAGAGGAGCCTACAGAAACCACAGAGCTGAGCCAGCCTGCCCACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR GCA 90 bp | GCCTGGTGCCCTGGAAGTATGTGGGAAGAGGGCACAGTGATGGAGTATGGGAGCGCTCTCATTCCACACTaGTGGGCACCGCCAACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWCPGSMWEEGTVMEYGSALIPH*WAPPTS Trigger: TGACGTTGGCGGTGCCCAGCAGTGTGGAATGAGAGC...GCTCCCATACTCCATCACTGTGCCCTCTTCCCACATACTTCCAGGGCACCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGAGCGCTGGTCAGCAGACGACATGGCTGTCTGCTGCTGTAATGTCCCTGCTCTCATTCCACACTaGTGGGCACCGCCAACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAERWSADDMAVCCCNVPALIPH*WAPPTS Trigger: TGACGTTGGCGGTGCCCAGCAGTGTGGAATGAGAGC...AGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCAGCGCTCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCCTGGCAAAGCCTTGGGTGGCCTGGTGCCCTGGAAGTATGTGGGAAGAGTTCCCGGTCCGCACCTaGAGAGCTCTCATTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLAKPWVAWCPGSMWEEFPVRT*RALIPH Trigger: GTGTGGAATGAGAGCTCTGCAGGTGCGGACCGGGAA...CTCTTCCCACATACTTCCAGGGCACCAGGCCACCCAAGGCTTTGCCAGGACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | TGGTCAGCAGACGACATGGCTGTCTGCTGCTGTAATGTCCCTACTCAGGCTGATCGCTCCTTCAGGATCTaGCAGGTGGCTGGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WSADDMAVCCCNVPTQADRSFRI*QVAGAG Trigger: CCCTGCACCAGCCACCTGCCAGATCCTGAAGGAGCG...ATCAGCCTGAGTAGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGCAAGTCCAAGCAGGAAAGTCGAGAAGGAACTGAGTGACTTCATGTTCGATCTGGCAGGTGGCTaGTGCAGGGGCAGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPASPSRKVEKELSDFMFDLAGG*CRGSHL Trigger: GAGGTGACTGCCCCTGCACCAGCCACCTGCCAGATC...GAACATGAAGTCACTCAGTTCCTTCTCGACTTTCCTGCTTGGACTTGCAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTGAGAGTTATCCCAGCCTGTTTCCTAAGACAGGGGTTGGAGGCAGAGTGCCTCATTCCACACTGCTaGGCACCGCCAACGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRVIPACFLRQGLEAECLIPHC*APPTSP Trigger: GGGTGACGTTGGCGGTGCCCAGCAGTGTGGAATGAG...GCACTCTGCCTCCAACCCCTGTCTTAGGAAACAGGCTGGGATAACTCTCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAACTGAGTGACTTCATGTTCTCGCCAAACATCCTCCCGAAGAGCGCCAGGCTCATTCCACACTGCTaGGCACCGCCAACGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KELSDFMFSPNILPKSARLIPHC*APPTSP Trigger: GGGTGACGTTGGCGGTGCCCAGCAGTGTGGAATGAG...CCTGGCGCTCTTCGGGAGGATGTTTGGCGAGAACATGAAGTCACTCAGTTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR TCA 90 bp | CCAGACGCTAGGGAGGGAGGAATGTTGACAAGGAGTCCGCAGAGGGTGGGTGAAAGTCACCTCTTCTTCTaGGATGTCAAACCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDAREGGMLTRSPQRVGESHLFF*DVKPQL Trigger: CAGCTGGGGTTTGACATCTCAGAAGAAGAGGTGACT...TTCACCCACCCTCTGCGGACTCCTTGTCAACATTCCTCCCTCCCTAGCGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTGTAGGCTCCTCTCATTCAGAGAGTTCATCGAGGAGGCAGTGCATCTCTCAGGATCTGGCAGGTaGCTGGTGCAGGGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFCRLLSFREFIEEAVHLSGSGR*LVQGQS Trigger: TGACTGCCCCTGCACCAGCCACCTGCCAGATCCTGA...GAGATGCACTGCCTCCTCGATGAACTCTCTGAATGAGAGGAGCCTACAGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR TCA 90 bp | GAGCGCTGGTCAGCAGACGACATGGCTGTCTGCTGCTGTAATGTCCCTACTCAGAGTCACCTCTTCTTCTaGGATGTCAAACCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERWSADDMAVCCCNVPTQSHLFF*DVKPQL Trigger: CAGCTGGGGTTTGACATCTCAGAAGAAGAGGTGACT...CTGAGTAGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCAGCGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR GCA 90 bp | GTCGAGAAGGAACTGAGTGACTTCATGTTCTCGCCAAACATCCTCCCGAAGAGCTTCCCGGTCCGCACCTaGAGAGCTCTCATTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VEKELSDFMFSPNILPKSFPVRT*RALIPH Trigger: GTGTGGAATGAGAGCTCTGCAGGTGCGGACCGGGAA...GCTCTTCGGGAGGATGTTTGGCGAGAACATGAAGTCACTCAGTTCCTTCTCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| 3UTR CAA 72 bp | ACCCCCACCAGCTCTCTCAGGGATTTCTGGGACTCATaGGTACAGAACCTCACTTTCAGCGGGGACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPTSSLRDFWDS*VQNLTFSGDCF Trigger: GAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACCAATGAGTCCCAGAAATCCCTGAGAGAGCTGGTGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGGTGCCCTGGAAGTATGTGGGAAGAGGGCACAGTGATGGAGTATGGGAGCGATGTCATCAAATTCTaGGCGGACTCCTTCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AWCPGSMWEEGTVMEYGSDVIKF*ADSFMD Trigger: ATCCATGAAGGAGTCCGCTCAGAATTTGATGACATC...GCTCCCATACTCCATCACTGTGCCCTCTTCCCACATACTTCCAGGGCACCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | AGAGGGTGGGTGAAGGGGATGGCTGGCTCTGGCCCAGGAACAAGCACCCTAGAAAATCACCACACAGTTTaGGTTGGACATATCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGWVKGMAGSGPGTSTLENHHTV*VGHIDV Trigger: GACATCGATATGTCCAACCCAAACTGTGTGGTGATT...TTCTAGGGTGCTTGTTCCTGGGCCAGAGCCAGCCATCCCCTTCACCCACCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGCGCTGGTCAGCAGACGACATGGCTGTCTGCTGCTGTAATGTCCCTAAGCTCCATTAGCACCTaGAAGGCTCTGTTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQSAGQQTTWLSAAVMSLSSIST*KALFMF Trigger: GAACATGAACAGAGCCTTCCAGGTGCTAATGGAGCT...TAGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCAGCGCTCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR TCA 90 bp | GTGACTAAAGGAGTTCAGGGACTTAGTTTCAGAGGGACCTTTCAGCCCAAGGGTTGTCATCGCCAATCATaGTGGCCTGGTGGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTKGVQGLSFRGTFQPKGCHRQS*WPGGLP Trigger: TGGAAGCCCACCAGGCCATCATGATTGGCGATGACA...ACCCTTGGGCTGAAAGGTCCCTCTGAAACTAAGTCCCTGAACTCCTTTAGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGTGCTGATCAGTCATTCTGACTGGGGCCAGATAGGGCTATGGGTGGTGTCTCTCAGGGATTTCTaGGACTCATTGGTACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRVLISHSDWGQIGLWVVSLRDF*DSLVQN Trigger: GTTCTGTACCAATGAGTCCCAGAAATCCCTGAGAGA...CACCACCCATAGCCCTATCTGGCCCCAGTCAGAATGACTGATCAGCACTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | GAGCGCTGGTCAGCAGACGACATGGCTGTCTGCTGCTGTAATGTCCCTACTCAGTCTCTCAGGGATTTCTaGGACTCATTGGTACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERWSADDMAVCCCNVPTQSLRDF*DSLVQN Trigger: GTTCTGTACCAATGAGTCCCAGAAATCCCTGAGAGA...CTGAGTAGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCAGCGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTCCTGAATCAAGGGCCTGCAAGTCCAAGCAGGAAAGTCGAGAAGGAACTTGTCATCGCCAATCATaGTGGCCTGGTGGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFPESRACKSKQESREGTCHRQS*WPGGLP Trigger: TGGAAGCCCACCAGGCCATCATGATTGGCGATGACA...AGTTCCTTCTCGACTTTCCTGCTTGGACTTGCAGGCCCTTGATTCAGGAAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
||
| CDS-3UTR CCA 90 bp | TTGGATGTCATTAGGGGAAACATGGCATGGGCCAGGGAGGGGAACAAACCTCTGAGCTCCATTAGCACCTaGAAGGCTCTGTTCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDVIRGNMAWAREGNKPLSSIST*KALFMF Trigger: GAACATGAACAGAGCCTTCCAGGTGCTAATGGAGCT...CAGAGGTTTGTTCCCCTCCCTGGCCCATGCCATGTTTCCCCTAATGACATCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| CDS-3UTR CCA 90 bp | TTGGATGTCATTAGGGGAAACATGGCATGGGCCAGGGAGGGGAACAAACCTCTGATCTGCCTGTACTTCTaGATGATGCTCATCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDVIRGNMAWAREGNKPLICLYF*MMLITR Trigger: CCTGGTGATGAGCATCATCCAGAAGTACAGGCAGAT...CAGAGGTTTGTTCCCCTCCCTGGCCCATGCCATGTTTCCCCTAATGACATCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
||
| 3UTR CAA 72 bp | CATCCCAACTCTAAGGAGCTTTCTGTGCCTTCAGTCTaGACTGTAGAGGTGGACATTTCTCTCTGTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPNSKELSVPSV*TVEVDISLCGR Trigger: CCTCCCACAGAGAGAAATGTCCACCTCTACAGTCAAGACTGAAGGCACAGAAAGCTCCTTAGAGTTGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS-3UTR CCA 90 bp | TGGTCAGCAGACGACATGGCTGTCTGCTGCTGTAATGTCCCTACTCAGGCTGATCCACACAGTTTGGGTTaGACATATCGATGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: WSADDMAVCCCNVPTQADPHSLG*TYRCHQ Trigger: TTGATGACATCGATATGTCCAACCCAAACTGTGTGG...ATCAGCCTGAGTAGGGACATTACAGCAGCAGACAGCCATGTCGTCTGCTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| CDS-3UTR CCA 90 bp | GTCGAGAAGGAACTGAGTGACTTCATGTTCTCGCCAAACATCCTCCCGAAGAGCAATCACCACACAGTTTaGGTTGGACATATCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VEKELSDFMFSPNILPKSNHHTV*VGHIDV Trigger: GACATCGATATGTCCAACCCAAACTGTGTGGTGATT...GCTCTTCGGGAGGATGTTTGGCGAGAACATGAAGTCACTCAGTTCCTTCTCGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| CDS-3UTR CCA 90 bp | ATTTTCTGGAGGCCTGACAGGTCTCTTTCACCTTCTTGGATGTCATTAGGGGAACCACACAGTTTGGGTTaGACATATCGATGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: IFWRPDRSLSPSWMSLGEPHSLG*TYRCHQ Trigger: TTGATGACATCGATATGTCCAACCCAAACTGTGTGG...TTCCCCTAATGACATCCAAGAAGGTGAAAGAGACCTGTCAGGCCTCCAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| 3UTR CAA 72 bp | GGGACTGTTTCAGTCTATGTTATGAAACTTCAAGCGTaGGCTGACATTACAAAACAGACAACCCAGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVSVYVMKLQA*ADITKQTTQNP Trigger: TGGATTCTGGGTTGTCTGTTTTGTAATGTCAGCCAACGCTTGAAGTTTCATAACATAGACTGAAACAGTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148669.2 |
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| CDS GCA 90 bp | GGCCTGAACTTCCCGGTCCGCACCTGCAGAGCTCTCATTCCACACTaGTGGGCACCGCCAACGTCACCCACGATGTCATCGCCAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: GLNFPVRTCRALIPH*WAPPTSPTMSSPIM Trigger: CATGATTGGCGATGACATCGTGGGTGACGTTGGCGGTGCCCAGCAGTGTGGAATGAGAGCTCTGCAGGTGCGGACCGGGAAGTTCAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS GCA 90 bp | GGTACAGAACCTCACTTTCAGCGGGGACTGTTTCAGTCTCGCCACTaGCTCCACAGAGCCTGCGATAGCGGTTGCACCGCTTGCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GTEPHFQRGLFQSRH*LHRACDSGCTACAA Trigger: AGCAGCGCAAGCGGTGCAACCGCTATCGCAGGCTCTGTGGAGGCAGTGGCGAGACTGAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS GCA 90 bp | GGTCTGAACTTCCCGGTCCGCACCTGCAGAGCTCTCATTCCACACTaGTGGGCACCGCCAACGTCACCCACGATGTCATCGCCAATCATG | + |
|
Preference number: 5 (lower is better) Translates to: GLNFPVRTCRALIPH*WAPPTSPTMSSPIM Trigger: CATGATTGGCGATGACATCGTGGGTGACGTTGGCGGTGCCCAGCAGTGTGGAATGAGAGCTCTGCAGGTGCGGACCGGGAAGTTCAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| CDS CCA 90 bp | TCATGGATAAGCAAGTGTGGCCGCAGGCCTCGCTCCTTCAGGATCTaGCAGGTGGCTGGTGCAGGGGCAGTCACCTCTTCTTCTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SWISKCGRRPRSFRI*QVAGAGAVTSSSEM Trigger: CATCTCAGAAGAAGAGGTGACTGCCCCTGCACCAGCCACCTGCCAGATCCTGAAGGAGCGAGGCCTGCGGCCACACTTGCTTATCCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CCA 90 bp | CTGAACTTCCCGGTCCGCACCTGCAGAGCTCTCATTCCACACTGCTaGGCACCGCCAACGTCACCCACGATGTCATCGCCAATCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: LNFPVRTCRALIPHC*APPTSPTMSSPIMM Trigger: CATCATGATTGGCGATGACATCGTGGGTGACGTTGGCGGTGCCCAGCAGTGTGGAATGAGAGCTCTGCAGGTGCGGACCGGGAAGTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CCA 90 bp | CACAGCCTCCGCAAGGTTGTCCACGTACCCATCTGCCTGTACTTCTaGATGATGCTCATCACCAGGCCTGAACTTCCCGGTCCGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSLRKVVHVPICLYF*MMLITRPELPGPHL Trigger: CAGGTGCGGACCGGGAAGTTCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCTTGCGGAGGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS-3UTR CAA 90 bp | TGGTGGGCAGGCTGGCTCAGCTCTGTGGTTTCTGTAGGCTCCTCTCATTCAGAGACAGCCTCCGCAAGGTaGTCCACGTACCCATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WWAGWLSSVVSVGSSHSETASAR*STYPSA Trigger: GGCAGATGGGTACGTGGACAACCTTGCGGAGGCTGT...CTCTGAATGAGAGGAGCCTACAGAAACCACAGAGCTGAGCCAGCCTGCCCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS TCA 90 bp | CGTACCCATCTGCCTGTACTTCTGGATGATGCTCATCACCAGGCCTaGACTTCCCGGTCCGCACCTGCAGAGCTCTCATTCCACACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTHLPVLLDDAHHQA*TSRSAPAELSFHTA Trigger: AGCAGTGTGGAATGAGAGCTCTGCAGGTGCGGACCGGGAAGTTCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS GCA 90 bp | CAGCAGCAGATCCACAGCCTCCGCAAGGTTGTCCACGTACCCATCTaGCTGTACTTCTGGATGATGCTCATCACCAGGCCTGAACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QQQIHSLRKVVHVPI*LYFWMMLITRPELP Trigger: GGGAAGTTCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCTTGCGGAGGCTGTGGATCTGCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS CCA 90 bp | GCACCGCCAACGTCACCCACGATGTCATCGCCAATCATGATGGCCTaGTGGGCTTCCACCCCTATGGCTTGTAGAGCAGACTTGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: APPTSPTMSSPIMMA*WASTPMACRADLKN Trigger: GTTCTTCAAGTCTGCTCTACAAGCCATAGGGGTGGAAGCCCACCAGGCCATCATGATTGGCGATGACATCGTGGGTGACGTTGGCGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CCA 90 bp | GCTGAAGCACCCCCACCAGCTCTCTCAGGGATTTCTGGGACTCATTaGTACAGAACCTCACTTTCAGCGGGGACTGTTTCAGTCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AEAPPPALSGISGTH*YRTSLSAGTVSVSP Trigger: TGGCGAGACTGAAACAGTCCCCGCTGAAAGTGAGGTTCTGTACCAATGAGTCCCAGAAATCCCTGAGAGAGCTGGTGGGGGTGCTTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CCA 90 bp | CCGCCAACGTCACCCACGATGTCATCGCCAATCATGATGGCCTGGTaGGCTTCCACCCCTATGGCTTGTAGAGCAGACTTGAAGAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPTSPTMSSPIMMAW*ASTPMACRADLKNS Trigger: TGAGTTCTTCAAGTCTGCTCTACAAGCCATAGGGGTGGAAGCCCACCAGGCCATCATGATTGGCGATGACATCGTGGGTGACGTTGGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS-3UTR CAA 90 bp | GTGGGAAGAGGGCACAGTGATGGAGTATGGGAGCAGGGGTGCCCTTGTCCACTGACCACACAGTTTGGGTaGGACATATCGATGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VGRGHSDGVWEQGCPCPLTTQFG*DISMSS Trigger: TGATGACATCGATATGTCCAACCCAAACTGTGTGGT...CAGTGGACAAGGGCACCCCTGCTCCCATACTCCATCACTGTGCCCTCTTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS-3UTR CAA 90 bp | GGGCCTGCAAGTCCAAGCAGGAAAGTCGAGAAGGAACTGAGTGACTTCATGTTCCCCACCACTTCAGCCTaGATACCACAGGCATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: GPASPSRKVEKELSDFMFPTTSA*IPQAYS Trigger: CGAGTATGCCTGTGGTATCAAGGCTGAAGTGGTGGG...GAACATGAAGTCACTCAGTTCCTTCTCGACTTTCCTGCTTGGACTTGCAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCATTCAGAGAGTTCATCGAGGAGGCAGTGCATCTCATCCAATTGGATGGCCCACCACTTCAGCCTaGATACCACAGGCATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: PLIQRVHRGGSASHPIGWPTTSA*IPQAYS Trigger: CGAGTATGCCTGTGGTATCAAGGCTGAAGTGGTGGG...CCATCCAATTGGATGAGATGCACTGCCTCCTCGATGAACTCTCTGAATGAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS TCA 90 bp | AATCACCACACAGTTTGGGTTGGACATATCGATGTCATCAAATTCTaGGCGGACTCCTTCATGGATAAGCAAGTGTGGCCGCAGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NHHTVWVGHIDVIKF*ADSFMDKQVWPQAS Trigger: CGAGGCCTGCGGCCACACTTGCTTATCCATGAAGGAGTCCGCTCAGAATTTGATGACATCGATATGTCCAACCCAAACTGTGTGGTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CCA 90 bp | AGGAAAAGGCCTCCCCAGCATCCGCAATCACCACACAGTTTGGGTTaGACATATCGATGTCATCAAATTCTGAGCGGACTCCTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKRPPQHPQSPHSLG*TYRCHQILSGLLHG Trigger: TCCATGAAGGAGTCCGCTCAGAATTTGATGACATCGATATGTCCAACCCAAACTGTGTGGTGATTGCGGATGCTGGGGAGGCCTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS-3UTR CAA 90 bp | GAGAAGGAACTGAGTGACTTCATGTTCTCGCCAAACATCCTCCCGAAGAGCGCCGATTTCTGGGACTCATaGGTACAGAACCTCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EKELSDFMFSPNILPKSADFWDS*VQNLTF Trigger: GAAAGTGAGGTTCTGTACCAATGAGTCCCAGAAATC...GGCGCTCTTCGGGAGGATGTTTGGCGAGAACATGAAGTCACTCAGTTCCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| CDS-3UTR CAA 90 bp | GAGAAGGAACTGAGTGACTTCATGTTCTCGCCAAACATCCTCCCGAAGAGCGCCACCACACAGTTTGGGTaGGACATATCGATGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EKELSDFMFSPNILPKSATTQFG*DISMSS Trigger: TGATGACATCGATATGTCCAACCCAAACTGTGTGGT...GGCGCTCTTCGGGAGGATGTTTGGCGAGAACATGAAGTCACTCAGTTCCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106170.8 |
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| CDS-3UTR CAA 90 bp | GCTCAGCTCTGTGGTTTCTGTAGGCTCCTCTCATTCAGAGAGTTCATCGAGGAGGATTTCTGGGACTCATaGGTACAGAACCTCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQLCGFCRLLSFREFIEEDFWDS*VQNLTF Trigger: GAAAGTGAGGTTCTGTACCAATGAGTCCCAGAAATC...CTCCTCGATGAACTCTCTGAATGAGAGGAGCCTACAGAAACCACAGAGCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS-3UTR CAA 90 bp | CTCCTCTCATTCAGAGAGTTCATCGAGGAGGCAGTGCATCTCATCCAATTGGATCAATCACCACACAGTTaGGGTTGGACATATCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSFREFIEEAVHLIQLDQSPHS*GWTYRC Trigger: ACATCGATATGTCCAACCCAAACTGTGTGGTGATTG...ATCCAATTGGATGAGATGCACTGCCTCCTCGATGAACTCTCTGAATGAGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS CCA 72 bp | AGCAAGTGTGGCCGCAGGCCTCGCTCCTTCAGGATCTaGCAGGTGGCTGGTGCAGGGGCAGTCACCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SKCGRRPRSFRI*QVAGAGAVTSS Trigger: AGAAGAGGTGACTGCCCCTGCACCAGCCACCTGCCAGATCCTGAAGGAGCGAGGCCTGCGGCCACACTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CCA 72 bp | CCGGTCCGCACCTGCAGAGCTCTCATTCCACACTGCTaGGCACCGCCAACGTCACCCACGATGTCATCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PVRTCRALIPHC*APPTSPTMSSP Trigger: TGGCGATGACATCGTGGGTGACGTTGGCGGTGCCCAGCAGTGTGGAATGAGAGCTCTGCAGGTGCGGACCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS GCA 72 bp | TTCCCGGTCCGCACCTGCAGAGCTCTCATTCCACACTaGTGGGCACCGCCAACGTCACCCACGATGTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: FPVRTCRALIPH*WAPPTSPTMSS Trigger: CGATGACATCGTGGGTGACGTTGGCGGTGCCCAGCAGTGTGGAATGAGAGCTCTGCAGGTGCGGACCGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS GCA 72 bp | TGCTCATCACCAGGCCTGAACTTCCCGGTCCGCACCTaGAGAGCTCTCATTCCACACTGCTGGGCACCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSSPGLNFPVRT*RALIPHCWAPP Trigger: TGGCGGTGCCCAGCAGTGTGGAATGAGAGCTCTGCAGGTGCGGACCGGGAAGTTCAGGCCTGGTGATGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS GCA 72 bp | TCTGAGCGGACTCCTCGCCACTGCCTCCACAGAGCCTaGGATAGCGGTTGCACCGCTTGCGCTGCTATCACA | + |
|
Preference number: 6 (lower is better) Translates to: SERTPRHCLHRA*DSGCTACAAIT Trigger: TGTGATAGCAGCGCAAGCGGTGCAACCGCTATCGCAGGCTCTGTGGAGGCAGTGGCGAGGAGTCCGCTCAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133969.8 |
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| CDS TCA 72 bp | CTGCCTGTACTTCTGGATGATGCTCATCACCAGGCCTaGACTTCCCGGTCCGCACCTGCAGAGCTCTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LPVLLDDAHHQA*TSRSAPAELSF Trigger: GAATGAGAGCTCTGCAGGTGCGGACCGGGAAGTTCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS TCA 72 bp | AGGTTGTCCACGTACCCATCTGCCTGTACTTCTGGATaGTGCTCATCACCAGGCCTGAACTTCCCGGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RLSTYPSACTSG*CSSPGLNFPVR Trigger: GCGGACCGGGAAGTTCAGGCCTGGTGATGAGCATCATCCAGAAGTACAGGCAGATGGGTACGTGGACAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033241.6 |
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| CDS CCA 72 bp | ACGTCACCCACGATGTCATCGCCAATCATGATGGCCTaGTGGGCTTCCACCCCTATGGCTTGTAGAGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TSPTMSSPIMMA*WASTPMACRAD Trigger: GTCTGCTCTACAAGCCATAGGGGTGGAAGCCCACCAGGCCATCATGATTGGCGATGACATCGTGGGTGACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CCA 72 bp | ATATCGATGTCATCAAATTCTGAGCGGACTCCTTCATaGATAAGCAAGTGTGGCCGCAGGCCTCGCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISMSSNSERTPS*ISKCGRRPRSF Trigger: GAAGGAGCGAGGCCTGCGGCCACACTTGCTTATCCATGAAGGAGTCCGCTCAGAATTTGATGACATCGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CCA 72 bp | CCTCCCCAGCATCCGCAATCACCACACAGTTTGGGTTaGACATATCGATGTCATCAAATTCTGAGCGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: PPQHPQSPHSLG*TYRCHQILSGL Trigger: GAGTCCGCTCAGAATTTGATGACATCGATATGTCCAACCCAAACTGTGTGGTGATTGCGGATGCTGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CAA 72 bp | GCCTCCCCAGCATCCGCAATCACCACACAGTTTGGGTaGGACATATCGATGTCATCAAATTCTGAGCGGACT | + |
|
Preference number: 6 (lower is better) Translates to: ASPASAITTQFG*DISMSSNSERT Trigger: AGTCCGCTCAGAATTTGATGACATCGATATGTCCAACCCAAACTGTGTGGTGATTGCGGATGCTGGGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CAA 90 bp | TCTGATAGGAAAAGGCCTCCCCAGCATCCGCAATCACCACACAGTTaGGGTTGGACATATCGATGTCATCAAATTCTGAGCGGACTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SDRKRPPQHPQSPHS*GWTYRCHQILSGLL Trigger: AAGGAGTCCGCTCAGAATTTGATGACATCGATATGTCCAACCCAAACTGTGTGGTGATTGCGGATGCTGGGGAGGCCTTTTCCTATCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS CAA 72 bp | AAAAGGCCTCCCCAGCATCCGCAATCACCACACAGTTaGGGTTGGACATATCGATGTCATCAAATTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KRPPQHPQSPHS*GWTYRCHQILS Trigger: GCTCAGAATTTGATGACATCGATATGTCCAACCCAAACTGTGTGGTGATTGCGGATGCTGGGGAGGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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| CDS TCA 72 bp | ACAGTTTGGGTTGGACATATCGATGTCATCAAATTCTaGGCGGACTCCTTCATGGATAAGCAAGTGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TVWVGHIDVIKF*ADSFMDKQVWP Trigger: CGGCCACACTTGCTTATCCATGAAGGAGTCCGCTCAGAATTTGATGACATCGATATGTCCAACCCAAACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033241.6 ENSMUST00000106170.8 |
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