Pregenerated sensors for LHFPL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062252Ensembl transcript IDs: ENSMUST00000080780.8, ENSMUST00000232862.2, ENSMUST00000232974.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGGATCACTGCAGTGCTGTAGGAGCTGTCTGCTGCAGGGCTTCTaGCCTGTGCTGAGACTCTGGCCCAGGCCTGGAGGAGTTGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: YGSLQCCRSCLLQGF*PVLRLWPRPGGVEN Trigger: GTTCTCAACTCCTCCAGGCCTGGGCCAGAGTCTCAGCACAGGGCAGAAGCCCTGCAGCAGACAGCTCCTACAGCACTGCAGTGATCCATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR TCA 90 bp | GGGCTTCTGCCCTGTGCTGAGACTCTGGCCCAGGCCTGGAGGAGTTaGGAACAGGAAGCCAGAGGGAGATTTTCATCTCTGAAGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: GLLPCAETLAQAWRS*EQEARGRFSSLKDP Trigger: TGGATCCTTCAGAGATGAAAATCTCCCTCTGGCTTCCTGTTCTCAACTCCTCCAGGCCTGGGCCAGAGTCTCAGCACAGGGCAGAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR CCA 90 bp | GAGAGCCACCAAAGAGTTAAATGGCTTGCCGGTGGGAAGGAAACCTaGGTCTCCTGCCACACAGCTTCATATGGATCACTGCAGTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: ESHQRVKWLAGGKET*VSCHTASYGSLQCC Trigger: ACAGCACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGACCCAGGTTTCCTTCCCACCGGCAAGCCATTTAACTCTTTGGTGGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR CCA 90 bp | GATCTCAGGGAGGCAGAAGCAGGTGGATCTCTGAGAGTTCAAGGCTaGTCAACACTACCTAGAGAGATGCTGTCTCCAAAGCAGAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: DLREAEAGGSLRVQG*STLPREMLSPKQKQ Trigger: TTGCTTCTGCTTTGGAGACAGCATCTCTCTAGGTAGTGTTGACCAGCCTTGAACTCTCAGAGATCCACCTGCTTCTGCCTCCCTGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| 3UTR TCA 90 bp | CATGTGTTTGGTCTATGTTCCTCTCCCCATCACTGCTCTGCAACTTaGGAACAGTGGAGAGCCACCAAAGAGTTAAATGGCTTGCCGGTG | + |
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Preference number: 1 (lower is better) Translates to: HVFGLCSSPHHCSAT*EQWRATKELNGLPV Trigger: CACCGGCAAGCCATTTAACTCTTTGGTGGCTCTCCACTGTTCTCAAGTTGCAGAGCAGTGATGGGGAGAGGAACATAGACCAAACACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR TCA 90 bp | CACTACCTAGAGAGATGCTGTCTCCAAAGCAGAAGCAAGCGGGAATaGGCACATCATGTTTCTTTTGGAATCACGTTGAAACCAGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: HYLERCCLQSRSKRE*AHHVSFGITLKPVD Trigger: ATCTACTGGTTTCAACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGCTTGCTTCTGCTTTGGAGACAGCATCTCTCTAGGTAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| 3UTR CCA 90 bp | GTTACTGTAAATGGCAAATTTCTGAAGCTAGGAGCCAGTTCCAACTaGAGCACTGTGGGAAATGTGAGTTTTGGTTCCCATGAGAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: VTVNGKFLKLGASSN*STVGNVSFGSHEKS Trigger: TGACTTCTCATGGGAACCAAAACTCACATTTCCCACAGTGCTCCAGTTGGAACTGGCTCCTAGCTTCAGAAATTTGCCATTTACAGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR CCA 90 bp | TCTCCAAAGCAGAAGCAAGCGGGAATGAGCACATCATGTTTCTTTTaGAATCACGTTGAAACCAGTAGATCATTCTTTTTCTTCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SPKQKQAGMSTSCFF*NHVETSRSFFFFSC Trigger: ACAGCTGAAGAAAAAGAATGATCTACTGGTTTCAACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGCTTGCTTCTGCTTTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTAAGCCAAGGCCCGGCTTCTGCCCTGTGCTaGGACTCTGGCCCAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QEVVPQSATVNCHLSQGPASALC*DSGPGL Trigger: CAGGCCTGGGCCAGAGTCTCAGCACAGGGCAGAAGC...CGGGCCTTGGCTTAGGTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTAAGCCAAGGCCCGCAGGCCTGGAGGAGTTaGGAACAGGAAGCCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QEVVPQSATVNCHLSQGPQAWRS*EQEARG Trigger: CCCTCTGGCTTCCTGTTCTCAACTCCTCCAGGCCTG...CGGGCCTTGGCTTAGGTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGACAGCCCCTCAGGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTCCTGTGCTGAGACTCTaGCCCAGGCCTGGAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: EDSPSGSSAPICYSELSPPVLRL*PRPGGV Trigger: AACTCCTCCAGGCCTGGGCCAGAGTCTCAGCACAGG...AGGTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCCTGAGGGGCTGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCACCAAAGAGTTAAATGGCTTGCCGGTGGGAAGGAAACCTGGGTCTCCTGCTGTAGGAGCTGTCTaGTGCAGGGCTTCTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RATKELNGLPVGRKPGSPAVGAV*CRASAL Trigger: CAGGGCAGAAGCCCTGCAGCAGACAGCTCCTACAGC...AGGAGACCCAGGTTTCCTTCCCACCGGCAAGCCATTTAACTCTTTGGTGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCCATTGTCTAAACCTGAAGGTTTTGGTGAAATTCACTGTTCTGCCCCCAGGGAGGGGGCTGTGCTaGCCAGGTACCAAGTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PGHCLNLKVLVKFTVLPPGRGLC*PGTKLS Trigger: TGACAACTTGGTACCTGGGCAGCACAGCCCCCTCCC...TGGGGGCAGAACAGTGAATTTCACCAAAACCTTCAGGTTTAGACAATGGCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| 3UTR CAA 90 bp | TCATGTGTTTGGTCTATGTTCCTCTCCCCATCACTGCTCTGCAACTaGAGAACAGTGGAGAGCCACCAAAGAGTTAAATGGCTTGCCGGT | + |
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Preference number: 2 (lower is better) Translates to: SCVWSMFLSPSLLCN*RTVESHQRVKWLAG Trigger: ACCGGCAAGCCATTTAACTCTTTGGTGGCTCTCCACTGTTCTCAAGTTGCAGAGCAGTGATGGGGAGAGGAACATAGACCAAACACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATACTTCAGACCCCAAGTTTCTCACAAGTGCCACATAATCCCGTAACAGTTCACTGCTCTGCAACTTaGGAACAGTGGAGAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: LILQTPSFSQVPHNPVTVHCSAT*EQWRAT Trigger: GGTGGCTCTCCACTGTTCTCAAGTTGCAGAGCAGTG...AACTGTTACGGGATTATGTGGCACTTGTGAGAAACTTGGGGTCTGAAGTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAACCTGGGTCTCCTGCCACACAGCTTCATATGGATCACTGCAGTGCTGTGGAGATTTTCATCTCTaGAGGATCCAAGGCCTAATT | + |
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Preference number: 2 (lower is better) Translates to: KETWVSCHTASYGSLQCCGDFHL*RIQGLI Trigger: AATTAGGCCTTGGATCCTTCAGAGATGAAAATCTCC...ACAGCACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGACCCAGGTTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTGAAGCTAGGAGCCAGTTCCAACTGGAGCACTGTGGGAAATGTGAGTTTGAAACCTGGGTCTCCTaGCACACAGCTTCATATGGA | + |
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Preference number: 2 (lower is better) Translates to: ISEARSQFQLEHCGKCEFETWVS*HTASYG Trigger: TCCATATGAAGCTGTGTGGCAGGAGACCCAGGTTTC...AAACTCACATTTCCCACAGTGCTCCAGTTGGAACTGGCTCCTAGCTTCAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATCTTTGGATCACTGCAGTATTATTGCAGAGAACTGGAGAGTAGAGCGGTTGTCATTCATGAAACTTaGCTAGCCTGGAGGCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: SIFGSLQYYCRELESRAVVIHET*LAWRPD Trigger: GTCAGGCCTCCAGGCTAGGCAAGTTTCATGAATGAC...AACCGCTCTACTCTCCAGTTCTCTGCAATAATACTGCAGTGATCCAAAGATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTAAGCCAAGGCCCGAACAGTTACTGTAAATaGCAAATTTCTGAAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: QEVVPQSATVNCHLSQGPNSYCK*QISEAR Trigger: CCTAGCTTCAGAAATTTGCCATTTACAGTAACTGTT...CGGGCCTTGGCTTAGGTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR CAA 90 bp | CCCATGAGAAGTCAAATTGAGCTTAGGAATTTCCTGATCATGTGTTaGGTCTATGTTCCTCTCCCCATCACTGCTCTGCAACTTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: PMRSQIELRNFLIMC*VYVPLPITALQLEN Trigger: GTTCTCAAGTTGCAGAGCAGTGATGGGGAGAGGAACATAGACCAAACACATGATCAGGAAATTCCTAAGCTCAATTTGACTTCTCATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATGAGCGATATTAGAGGTGTTGAGAATTTAAAGGTGAAGCTGGTTAAAGAGCCTAGCCTGGAGGCCTaGCTAGGAACTGTTAGAATT | + |
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Preference number: 2 (lower is better) Translates to: RMSDIRGVENLKVKLVKEPSLEA*LGTVRI Trigger: AATTCTAACAGTTCCTAGTCAGGCCTCCAGGCTAGG...CTCTTTAACCAGCTTCACCTTTAAATTCTCAACACCTCTAATATCGCTCATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATACTTCAGACCCCAAGTTTCTCACAAGTGCCACATAATCCCGTAACAGTTGAGTTTTGGTTCCCATaGGAAGTCAAATTGAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LILQTPSFSQVPHNPVTVEFWFP*EVKLSL Trigger: TAAGCTCAATTTGACTTCTCATGGGAACCAAAACTC...AACTGTTACGGGATTATGTGGCACTTGTGAGAAACTTGGGGTCTGAAGTATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAATTCTGTCTCTGTTACTGTAGAGCAAAAAGGCAATTCTCAGCGATTAGCTTCACTGCAGTATTATTaGAGAGAACTGGAGAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LNSVSVTVEQKGNSQRLASLQYY*RELESR Trigger: TCTACTCTCCAGTTCTCTGCAATAATACTGCAGTGA...AGCTAATCGCTGAGAATTGCCTTTTTGCTCTACAGTAACAGAGACAGAATTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTAAGCCAAGGCCCGCCAGGCCTGGAGGAGTaGAGAACAGGAAGCCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: QEVVPQSATVNCHLSQGPPGLEE*RTGSQR Trigger: CCTCTGGCTTCCTGTTCTCAACTCCTCCAGGCCTGG...CGGGCCTTGGCTTAGGTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR GCA 72 bp | GTCTCCTGCCACACAGCTTCATATGGATCACTGCAGTaGTGTAGGAGCTGTCTGCTGCAGGGCTTCTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: VSCHTASYGSLQ*CRSCLLQGFCP Trigger: AGGGCAGAAGCCCTGCAGCAGACAGCTCCTACAGCACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR GCA 72 bp | CCTGGGTCTCCTGCCACACAGCTTCATATGGATCACTaGAGTGCTGTAGGAGCTGTCTGCTGCAGGGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: PGSPATQLHMDH*SAVGAVCCRAS Trigger: AGAAGCCCTGCAGCAGACAGCTCCTACAGCACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGACCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR GCA 72 bp | AAATGGCTTGCCGGTGGGAAGGAAACCTGGGTCTCCTaGCACACAGCTTCATATGGATCACTGCAGTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: KWLAGGKETWVS*HTASYGSLQCC Trigger: ACAGCACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGACCCAGGTTTCCTTCCCACCGGCAAGCCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR CCA 72 bp | AACTTGAGAACAGTGGAGAGCCACCAAAGAGTTAAATaGCTTGCCGGTGGGAAGGAAACCTGGGTCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: NLRTVESHQRVK*LAGGKETWVSC Trigger: GCAGGAGACCCAGGTTTCCTTCCCACCGGCAAGCCATTTAACTCTTTGGTGGCTCTCCACTGTTCTCAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR CCA 72 bp | GAGGCAGAAGCAGGTGGATCTCTGAGAGTTCAAGGCTaGTCAACACTACCTAGAGAGATGCTGTCTCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: EAEAGGSLRVQG*STLPREMLSPK Trigger: CTTTGGAGACAGCATCTCTCTAGGTAGTGTTGACCAGCCTTGAACTCTCAGAGATCCACCTGCTTCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| 3UTR TCA 72 bp | GGTCTATGTTCCTCTCCCCATCACTGCTCTGCAACTTaGGAACAGTGGAGAGCCACCAAAGAGTTAAATGGC | + |
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Preference number: 3 (lower is better) Translates to: GLCSSPHHCSAT*EQWRATKELNG Trigger: GCCATTTAACTCTTTGGTGGCTCTCCACTGTTCTCAAGTTGCAGAGCAGTGATGGGGAGAGGAACATAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| 3UTR-3UTR CAA 90 bp | AGCATCTTTGGATCACTGCAGTATTATTGCAGAGAACTGGAGAGTAGAGCGGTTTGCCCAGGTACCAAGTaGTCATTCATGAAACTTGCC | + |
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Preference number: 3 (lower is better) Translates to: SIFGSLQYYCRELESRAVCPGTK*SFMKLA Trigger: GGCAAGTTTCATGAATGACAACTTGGTACCTGGGCA...AACCGCTCTACTCTCCAGTTCTCTGCAATAATACTGCAGTGATCCAAAGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| 3UTR CCA 72 bp | AATGGCAAATTTCTGAAGCTAGGAGCCAGTTCCAACTaGAGCACTGTGGGAAATGTGAGTTTTGGTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: NGKFLKLGASSN*STVGNVSFGSH Trigger: ATGGGAACCAAAACTCACATTTCCCACAGTGCTCCAGTTGGAACTGGCTCCTAGCTTCAGAAATTTGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR GCA 90 bp | AGCCACCAAAGAGTTAAATGGCTTGCCGGTGGGAAGGAAACCTGGGTCTCCTGCGTGTACTTGCCCGTCTaGTCGCCACACATACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SHQRVKWLAGGKETWVSCVYLPV*SPHIRR Trigger: GCGGCGTATGTGTGGCGAGCAGACGGGCAAGTACAC...GCAGGAGACCCAGGTTTCCTTCCCACCGGCAAGCCATTTAACTCTTTGGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTAAGCCAAGGCCCGCAGACGGCCCAGTGTGTACTTaGCCGTCTGCTCGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: SSAPICYSELSPKPRPADGPVCT*PSARHT Trigger: TGTGTGGCGAGCAGACGGGCAAGTACACACTGGGCC...GTCTGCGGGCCTTGGCTTAGGTGACAGTTCACTGTAGCAGATTGGGGCACTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTAAGCCAAGGCCCGCGATCATTAGGCCCGTaGCAGCAGCCAGCTGCATCC | + |
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Preference number: 4 (lower is better) Translates to: QEVVPQSATVNCHLSQGPRSLGP*QQPAAS Trigger: GGATGCAGCTGGCTGCTGCCACGGGCCTAATGATCG...CGGGCCTTGGCTTAGGTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGACAGCCCCTCAGGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACGTGGCAGCAGCCAGCTaGATCCAGGCGCAAATCTTG | + |
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Preference number: 4 (lower is better) Translates to: ERTAPQEVVPQSATVNCHVAAAS*IQAQIL Trigger: CAAGATTTGCGCCTGGATGCAGCTGGCTGCTGCCAC...GTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCCTGAGGGGCTGTCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR GCA 90 bp | TGGGAAGGAAACCTGGGTCTCCTGCCACACAGCTTCATATGGATCACTGCAGTGAGGCCCAGCGGATGGTaGAGTGGCCCAGTGTGTACT | + |
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Preference number: 4 (lower is better) Translates to: WEGNLGLLPHSFIWITAVRPSGW*SGPVCT Trigger: AGTACACACTGGGCCACTGCACCATCCGCTGGGCCT...CACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGACCCAGGTTTCCTTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR GCA 90 bp | GTGGGAAGGAAACCTGGGTCTCCTGCCACACAGCTTCATATGGATCACTGCAGTCCGACGACAGCACGTTaGCCACGCAGTAGGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: VGRKPGSPATQLHMDHCSPTTAR*PRSRRT Trigger: TGTTCTCCTACTGCGTGGGCAACGTGCTGTCGTCGG...ACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGACCCAGGTTTCCTTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR GCA 90 bp | AAGGCTGGTCAACACTACCTAGAGAGATGCTGTCTCCAAAGCAGAAGCAAGCGGGGCCCAGTGTGTACTTaGCCGTCTGCTCGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: KAGQHYLERCCLQSRSKRGPVCT*PSARHT Trigger: TGTGTGGCGAGCAGACGGGCAAGTACACACTGGGCC...CCGCTTGCTTCTGCTTTGGAGACAGCATCTCTCTAGGTAGTGTTGACCAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CCA 90 bp | GGTGTAGTAGCCACACCTTTAATCCTAGATCTCAGGGAGGCAGAAGCAGGTGGAATCTTGGCGGCCTCCTaGGCTGGCAGCAACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: GVVATPLILDLREAEAGGILAAS*AGSNFT Trigger: GGTGAAGTTGCTGCCAGCCCAGGAGGCCGCCAAGAT...TCCACCTGCTTCTGCCTCCCTGAGATCTAGGATTAAAGGTGTGGCTACTACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CCA 90 bp | TGCCACACAGCTTCATATGGATCACTGCAGTGCTGTAGGAGCTGTCTGCTGCAGTACGCCGCACCTCACTaGAGTCCCAACCATCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: CHTASYGSLQCCRSCLLQYAAPH*SPNHLG Trigger: ACCCAGATGGTTGGGACTCCAGTGAGGTGCGGCGTA...CTGCAGCAGACAGCTCCTACAGCACTGCAGTGATCCATATGAAGCTGTGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAGGAAACCTGGGTCTCCTGCCACACAGCTTCATATGGATCACTGCAGTGAGAACATGGCAGTCTTaGAGGCTCTGGAGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: WEGNLGLLPHSFIWITAVRTWQS*RLWRGW Trigger: CCATCCCCTCCAGAGCCTTCAAGACTGCCATGTTCT...CACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGACCCAGGTTTCCTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CCA 90 bp | TTGGTCTATGTTCCTCTCCCCATCACTGCTCTGCAACTTGAGAACAGTGGAGAGATCTTGGCGGCCTCCTaGGCTGGCAGCAACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: LVYVPLPITALQLENSGEILAAS*AGSNFT Trigger: GGTGAAGTTGCTGCCAGCCCAGGAGGCCGCCAAGAT...CTCTCCACTGTTCTCAAGTTGCAGAGCAGTGATGGGGAGAGGAACATAGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CCA 90 bp | GAGTTCAAGGCTGGTCAACACTACCTAGAGAGATGCTGTCTCCAAAGCAGAAGCTGGTGTGGTAGATCTTaGCGGCCTCCTGGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: EFKAGQHYLERCCLQSRSWCGRS*RPPGLA Trigger: TGCCAGCCCAGGAGGCCGCCAAGATCTACCACACCA...GCTTCTGCTTTGGAGACAGCATCTCTCTAGGTAGTGTTGACCAGCCTTGAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CCA 90 bp | TTGGTCTATGTTCCTCTCCCCATCACTGCTCTGCAACTTGAGAACAGTGGAGAGTGGTGTGGTAGATCTTaGCGGCCTCCTGGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LVYVPLPITALQLENSGEWCGRS*RPPGLA Trigger: TGCCAGCCCAGGAGGCCGCCAAGATCTACCACACCA...CTCTCCACTGTTCTCAAGTTGCAGAGCAGTGATGGGGAGAGGAACATAGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CCA 90 bp | ACACTACCTAGAGAGATGCTGTCTCCAAAGCAGAAGCAAGCGGGAATGAGCACACGATCATTAGGCCCGTaGCAGCAGCCAGCTGCATCC | + |
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Preference number: 4 (lower is better) Translates to: TLPREMLSPKQKQAGMSTRSLGP*QQPAAS Trigger: GGATGCAGCTGGCTGCTGCCACGGGCCTAATGATCG...TGTGCTCATTCCCGCTTGCTTCTGCTTTGGAGACAGCATCTCTCTAGGTAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CCA 90 bp | TTGGTCTATGTTCCTCTCCCCATCACTGCTCTGCAACTTGAGAACAGTGGAGAGCAGCGGATGGTGCAGTaGCCCAGTGTGTACTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LVYVPLPITALQLENSGEQRMVQ*PSVYLP Trigger: GGGCAAGTACACACTGGGCCACTGCACCATCCGCTG...CTCTCCACTGTTCTCAAGTTGCAGAGCAGTGATGGGGAGAGGAACATAGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR GCA 90 bp | CTTCATATGGATCACTGCAGTGCTGTAGGAGCTGTCTGCTGCAGGGCTTCTGCCTTCCTCATTCCCATCTaGCTTGTAGTCATCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHMDHCSAVGAVCCRASAFLIPI*LVVIRE Trigger: CTCCCGGATGACTACAAGGCAGATGGGAATGAGGAA...GGCAGAAGCCCTGCAGCAGACAGCTCCTACAGCACTGCAGTGATCCATATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CCA 90 bp | GGGGGAGCATCTTTGGATCACTGCAGTATTATTGCAGAGAACTGGAGAGTAGAGCGATCATTAGGCCCGTaGCAGCAGCCAGCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GGASLDHCSIIAENWRVERSLGP*QQPAAS Trigger: GGATGCAGCTGGCTGCTGCCACGGGCCTAATGATCG...CTCTACTCTCCAGTTCTCTGCAATAATACTGCAGTGATCCAAAGATGCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR CCA 90 bp | GGGGGAGCATCTTTGGATCACTGCAGTATTATTGCAGAGAACTGGAGAGTAGAGCAGCGGATGGTGCAGTaGCCCAGTGTGTACTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGASLDHCSIIAENWRVEQRMVQ*PSVYLP Trigger: GGGCAAGTACACACTGGGCCACTGCACCATCCGCTG...CTCTACTCTCCAGTTCTCTGCAATAATACTGCAGTGATCCAAAGATGCTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR GCA 90 bp | TTAGGTGTAGTAGCCACACCTTTAATCCTAGATCTCAGGGAGGCAGAAGCAGGTCCGACGACAGCACGTTaGCCACGCAGTAGGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: LGVVATPLILDLREAEAGPTTAR*PRSRRT Trigger: TGTTCTCCTACTGCGTGGGCAACGTGCTGTCGTCGG...ACCTGCTTCTGCCTCCCTGAGATCTAGGATTAAAGGTGTGGCTACTACACCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR GCA 90 bp | GGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTAAGCCAAGGCCCGCAGAAGGAGAGGATGAGTaGATCTCCAATGCTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSSAPICYSELSPKPRPAEGEDE*ISNAED Trigger: ATCCTCAGCATTGGAGATGCACTCATCCTCTCCTTC...TGCGGGCCTTGGCTTAGGTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CCA 90 bp | CCTGGCCATTGTCTAAACCTGAAGGTTTTGGTGAAATTCACTGTTCTGCCCCCATACGCCGCACCTCACTaGAGTCCCAACCATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGHCLNLKVLVKFTVLPPYAAPH*SPNHLG Trigger: ACCCAGATGGTTGGGACTCCAGTGAGGTGCGGCGTA...TGGGGGCAGAACAGTGAATTTCACCAAAACCTTCAGGTTTAGACAATGGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGCAAGCGGGAATGAGCACATCATGTTTCTTTTGGAATCACGTTGAAACCAGGCTCTGGAGGGGATaGAGGAGAAGTCCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKQAGMSTSCFFWNHVETRLWRG*RRSPEG Trigger: GCCCTCTGGACTTCTCCTCCATCCCCTCCAGAGCCT...GGTTTCAACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGCTTGCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CCA 90 bp | CTGATACTTCAGACCCCAAGTTTCTCACAAGTGCCACATAATCCCGTAACAGTTAGGCTCTGGAGGGGATaGAGGAGAAGTCCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LILQTPSFSQVPHNPVTVRLWRG*RRSPEG Trigger: GCCCTCTGGACTTCTCCTCCATCCCCTCCAGAGCCT...AACTGTTACGGGATTATGTGGCACTTGTGAGAAACTTGGGGTCTGAAGTATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CCA 90 bp | AGCATCTTTGGATCACTGCAGTATTATTGCAGAGAACTGGAGAGTAGAGCGGTTAGGCTCTGGAGGGGATaGAGGAGAAGTCCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIFGSLQYYCRELESRAVRLWRG*RRSPEG Trigger: GCCCTCTGGACTTCTCCTCCATCCCCTCCAGAGCCT...AACCGCTCTACTCTCCAGTTCTCTGCAATAATACTGCAGTGATCCAAAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR GCA 90 bp | ACTTGCAAGTCTCTCTTTACCTGGCCATTGTCTAAACCTGAAGGTTTTGGTGAAGGCCCAGTGTGTACTTaGCCGTCTGCTCGCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: TCKSLFTWPLSKPEGFGEGPVCT*PSARHT Trigger: TGTGTGGCGAGCAGACGGGCAAGTACACACTGGGCC...TTCACCAAAACCTTCAGGTTTAGACAATGGCCAGGTAAAGAGAGACTTGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR GCA 90 bp | CAAGCGGGAATGAGCACATCATGTTTCTTTTGGAATCACGTTGAAACCAGTAGAAGGCCCAGCGGATGGTaGAGTGGCCCAGTGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QAGMSTSCFFWNHVETSRRPSGW*SGPVCT Trigger: AGTACACACTGGGCCACTGCACCATCCGCTGGGCCT...TCTACTGGTTTCAACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR GCA 90 bp | GAGTTCAAGGCTGGTCAACACTACCTAGAGAGATGCTGTCTCCAAAGCAGAAGCTTCCTCATTCCCATCTaGCTTGTAGTCATCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EFKAGQHYLERCCLQSRSFLIPI*LVVIRE Trigger: CTCCCGGATGACTACAAGGCAGATGGGAATGAGGAA...GCTTCTGCTTTGGAGACAGCATCTCTCTAGGTAGTGTTGACCAGCCTTGAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CCA 90 bp | GTGGCACATACAGTGAGGGAGGGGGCTGTGCTGCCCAGGTACCAAGTTGTCATTAAATCTTGTAGACCGTaGCTGTATTACAGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VAHTVREGAVLPRYQVVIKSCRP*LYYRRR Trigger: TCTTCGTCTGTAATACAGCCACGGTCTACAAGATTT...AATGACAACTTGGTACCTGGGCAGCACAGCCCCCTCCCTCACTGTATGTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGCAAGCGGGAATGAGCACATCATGTTTCTTTTGGAATCACGTTGAAACCTACGCCGCACCTCACTaGAGTCCCAACCATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKQAGMSTSCFFWNHVETYAAPH*SPNHLG Trigger: ACCCAGATGGTTGGGACTCCAGTGAGGTGCGGCGTA...GGTTTCAACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGCTTGCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CCA 90 bp | CAAGCGGGAATGAGCACATCATGTTTCTTTTGGAATCACGTTGAAACCAGTAGACAGCGGATGGTGCAGTaGCCCAGTGTGTACTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGMSTSCFFWNHVETSRQRMVQ*PSVYLP Trigger: GGGCAAGTACACACTGGGCCACTGCACCATCCGCTG...TCTACTGGTTTCAACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR GCA 90 bp | ACTTGCAAGTCTCTCTTTACCTGGCCATTGTCTAAACCTGAAGGTTTTGGTGAACCGACGACAGCACGTTaGCCACGCAGTAGGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TCKSLFTWPLSKPEGFGEPTTAR*PRSRRT Trigger: TGTTCTCCTACTGCGTGGGCAACGTGCTGTCGTCGG...TTCACCAAAACCTTCAGGTTTAGACAATGGCCAGGTAAAGAGAGACTTGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR GCA 90 bp | AAGCAGAAGCAAGCGGGAATGAGCACATCATGTTTCTTTTGGAATCACGTTGAAGTGGCAGCAGCCAGCTaGATCCAGGCGCAAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQKQAGMSTSCFFWNHVEVAAAS*IQAQIL Trigger: CAAGATTTGCGCCTGGATGCAGCTGGCTGCTGCCAC...TTCAACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGCTTGCTTCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR GCA 90 bp | CTCTTTACCTGGCCATTGTCTAAACCTGAAGGTTTTGGTGAAATTCACTGTTCTGTGTACTTGCCCGTCTaGTCGCCACACATACGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFTWPLSKPEGFGEIHCSVYLPV*SPHIRR Trigger: GCGGCGTATGTGTGGCGAGCAGACGGGCAAGTACAC...AGAACAGTGAATTTCACCAAAACCTTCAGGTTTAGACAATGGCCAGGTAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR GCA 90 bp | AGGATGAGCGATATTAGAGGTGTTGAGAATTTAAAGGTGAAGCTGGTTAAAGAGAGGCCCAGCGGATGGTaGAGTGGCCCAGTGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RMSDIRGVENLKVKLVKERPSGW*SGPVCT Trigger: AGTACACACTGGGCCACTGCACCATCCGCTGGGCCT...CTCTTTAACCAGCTTCACCTTTAAATTCTCAACACCTCTAATATCGCTCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR GCA 90 bp | GGGGGAGCATCTTTGGATCACTGCAGTATTATTGCAGAGAACTGGAGAGTAGAGGAAGGAGAGGATGAGTaGATCTCCAATGCTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGASLDHCSIIAENWRVEEGEDE*ISNAED Trigger: ATCCTCAGCATTGGAGATGCACTCATCCTCTCCTTC...CTCTACTCTCCAGTTCTCTGCAATAATACTGCAGTGATCCAAAGATGCTCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR CCA 90 bp | AGGATGAGCGATATTAGAGGTGTTGAGAATTTAAAGGTGAAGCTGGTTAAAGAGATCTTGGCGGCCTCCTaGGCTGGCAGCAACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: RMSDIRGVENLKVKLVKEILAAS*AGSNFT Trigger: GGTGAAGTTGCTGCCAGCCCAGGAGGCCGCCAAGAT...CTCTTTAACCAGCTTCACCTTTAAATTCTCAACACCTCTAATATCGCTCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR TCA 90 bp | CTCTTTACCTGGCCATTGTCTAAACCTGAAGGTTTTGGTGAAATTCACTGTTCTAGAACATGGCAGTCTTaGAGGCTCTGGAGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTWPLSKPEGFGEIHCSRTWQS*RLWRGW Trigger: CCATCCCCTCCAGAGCCTTCAAGACTGCCATGTTCT...AGAACAGTGAATTTCACCAAAACCTTCAGGTTTAGACAATGGCCAGGTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| 3UTR CAA 72 bp | CTCTCTTTACCTGGCCATTGTCTAAACCTGAAGGTTTaGGTGAAATTCACTGTTCTGCCCCCAGACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLPGHCLNLKV*VKFTVLPPDTV Trigger: CACTGTGTCTGGGGGCAGAACAGTGAATTTCACCAAAACCTTCAGGTTTAGACAATGGCCAGGTAAAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS-3UTR GCA 90 bp | ATGAGCACATCATGTTTCTTTTGGAATCACGTTGAAACCAGTAGATCATTCTTTGTGTACTTGCCCGTCTaGTCGCCACACATACGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: MSTSCFFWNHVETSRSFFVYLPV*SPHIRR Trigger: GCGGCGTATGTGTGGCGAGCAGACGGGCAAGTACAC...AAAGAATGATCTACTGGTTTCAACGTGATTCCAAAAGAAACATGATGTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR GCA 90 bp | CCAAAGCAGAAGCAAGCGGGAATGAGCACATCATGTTTCTTTTGGAATCACGTTGAAGGAGAGGATGAGTaGATCTCCAATGCTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKQKQAGMSTSCFFWNHVEGEDE*ISNAED Trigger: ATCCTCAGCATTGGAGATGCACTCATCCTCTCCTTC...AACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGCTTGCTTCTGCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTAGGAGCCAGTTCCAACTGGAGCACTGTGGGAAATGTGAGTTTTGGTTCAAATCTTGTAGACCGTaGCTGTATTACAGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EARSQFQLEHCGKCEFWFKSCRP*LYYRRR Trigger: TCTTCGTCTGTAATACAGCCACGGTCTACAAGATTT...GAACCAAAACTCACATTTCCCACAGTGCTCCAGTTGGAACTGGCTCCTAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CCA 90 bp | TTCAAGGCTGGTCAACACTACCTAGAGAGATGCTGTCTCCAAAGCAGAAGCAAGAAATCTTGTAGACCGTaGCTGTATTACAGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKAGQHYLERCCLQSRSKKSCRP*LYYRRR Trigger: TCTTCGTCTGTAATACAGCCACGGTCTACAAGATTT...CTTGCTTCTGCTTTGGAGACAGCATCTCTCTAGGTAGTGTTGACCAGCCTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR TCA 90 bp | AGCACATCATGTTTCTTTTGGAATCACGTTGAAACCAGTAGATCATTCTTTTTCAGAACATGGCAGTCTTaGAGGCTCTGGAGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: STSCFFWNHVETSRSFFFRTWQS*RLWRGW Trigger: CCATCCCCTCCAGAGCCTTCAAGACTGCCATGTTCT...GAAAAAGAATGATCTACTGGTTTCAACGTGATTCCAAAAGAAACATGATGTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR GCA 90 bp | TTGAATTCTGTCTCTGTTACTGTAGAGCAAAAAGGCAATTCTCAGCGATTAGCTTTCCTCATTCCCATCTaGCTTGTAGTCATCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNSVSVTVEQKGNSQRLAFLIPI*LVVIRE Trigger: CTCCCGGATGACTACAAGGCAGATGGGAATGAGGAA...AGCTAATCGCTGAGAATTGCCTTTTTGCTCTACAGTAACAGAGACAGAATTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS CCA 90 bp | CCAATGCTGAGGATGGCCAGCATGAAGGCCCAGCGGATGGTGCAGTaGCCCAGTGTGTACTTGCCCGTCTGCTCGCCACACATACGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PMLRMASMKAQRMVQ*PSVYLPVCSPHIRR Trigger: GCGGCGTATGTGTGGCGAGCAGACGGGCAAGTACACACTGGGCCACTGCACCATCCGCTGGGCCTTCATGCTGGCCATCCTCAGCATTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080780.8 ENSMUST00000232862.2 ENSMUST00000232974.2 |
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| CDS GCA 90 bp | AAGGCCCAGCGGATGGTGCAGTGGCCCAGTGTGTACTTGCCCGTCTaGTCGCCACACATACGCCGCACCTCACTGGAGTCCCAACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: KAQRMVQWPSVYLPV*SPHIRRTSLESQPS Trigger: AGATGGTTGGGACTCCAGTGAGGTGCGGCGTATGTGTGGCGAGCAGACGGGCAAGTACACACTGGGCCACTGCACCATCCGCTGGGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080780.8 ENSMUST00000232862.2 ENSMUST00000232974.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTAGTGCCCCAATCTGCTACAGTGAACTGTCACCTAAGCCAAGGCCCGCATGGCCCAGTGTGTACTaGCCCGTCTGCTCGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: GSSAPICYSELSPKPRPAWPSVY*PVCSPH Trigger: GTGTGGCGAGCAGACGGGCAAGTACACACTGGGCCA...TGCGGGCCTTGGCTTAGGTGACAGTTCACTGTAGCAGATTGGGGCACTACTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CAA 90 bp | CCTTTAATCCTAGATCTCAGGGAGGCAGAAGCAGGTGGATCTCTGAGAGTTCAATGGCCCAGTGTGTACTaGCCCGTCTGCTCGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PLILDLREAEAGGSLRVQWPSVY*PVCSPH Trigger: GTGTGGCGAGCAGACGGGCAAGTACACACTGGGCCA...TTGAACTCTCAGAGATCCACCTGCTTCTGCCTCCCTGAGATCTAGGATTAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CAA 90 bp | GTGGGAAGGAAACCTGGGTCTCCTGCCACACAGCTTCATATGGATCACTGCAGTAAGAACATGGCAGTCTaGAAGGCTCTGGAGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VGRKPGSPATQLHMDHCSKNMAV*KALEGM Trigger: CATCCCCTCCAGAGCCTTCAAGACTGCCATGTTCTT...ACTGCAGTGATCCATATGAAGCTGTGTGGCAGGAGACCCAGGTTTCCTTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232862.2 |
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| CDS-3UTR CAA 90 bp | TCAACACTACCTAGAGAGATGCTGTCTCCAAAGCAGAAGCAAGCGGGAATGAGCAAGAACATGGCAGTCTaGAAGGCTCTGGAGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: STLPREMLSPKQKQAGMSKNMAV*KALEGM Trigger: CATCCCCTCCAGAGCCTTCAAGACTGCCATGTTCTT...GCTCATTCCCGCTTGCTTCTGCTTTGGAGACAGCATCTCTCTAGGTAGTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080780.8 |
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| CDS-3UTR CAA 90 bp | AGCATCTTTGGATCACTGCAGTATTATTGCAGAGAACTGGAGAGTAGAGCGGTTAAGAACATGGCAGTCTaGAAGGCTCTGGAGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SIFGSLQYYCRELESRAVKNMAV*KALEGM Trigger: CATCCCCTCCAGAGCCTTCAAGACTGCCATGTTCTT...AACCGCTCTACTCTCCAGTTCTCTGCAATAATACTGCAGTGATCCAAAGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232974.2 |
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| CDS CAA 90 bp | GCCAGCATGAAGGCCCAGCGGATGGTGCAGTGGCCCAGTGTGTACTaGCCCGTCTGCTCGCCACACATACGCCGCACCTCACTGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASMKAQRMVQWPSVY*PVCSPHIRRTSLES Trigger: GGACTCCAGTGAGGTGCGGCGTATGTGTGGCGAGCAGACGGGCAAGTACACACTGGGCCACTGCACCATCCGCTGGGCCTTCATGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080780.8 ENSMUST00000232862.2 ENSMUST00000232974.2 |
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| CDS GCA 72 bp | CGGATGGTGCAGTGGCCCAGTGTGTACTTGCCCGTCTaGTCGCCACACATACGCCGCACCTCACTGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RMVQWPSVYLPV*SPHIRRTSLES Trigger: GGACTCCAGTGAGGTGCGGCGTATGTGTGGCGAGCAGACGGGCAAGTACACACTGGGCCACTGCACCATCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080780.8 ENSMUST00000232862.2 ENSMUST00000232974.2 |
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| CDS CCA 72 bp | AGGATGGCCAGCATGAAGGCCCAGCGGATGGTGCAGTaGCCCAGTGTGTACTTGCCCGTCTGCTCGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: RMASMKAQRMVQ*PSVYLPVCSPH Trigger: GTGTGGCGAGCAGACGGGCAAGTACACACTGGGCCACTGCACCATCCGCTGGGCCTTCATGCTGGCCATCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080780.8 ENSMUST00000232862.2 ENSMUST00000232974.2 |
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| CDS CAA 72 bp | AGGAACATGGCCAAGGCCACAAAGAACATGGCAGTCTaGAAGGCTCTGGAGGGGATGGAGGAGAAGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RNMAKATKNMAV*KALEGMEEKSR Trigger: TCTGGACTTCTCCTCCATCCCCTCCAGAGCCTTCAAGACTGCCATGTTCTTTGTGGCCTTGGCCATGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080780.8 ENSMUST00000232862.2 ENSMUST00000232974.2 |
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