Pregenerated sensors for LHFPL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042873Ensembl transcript IDs: ENSMUST00000162280.2, ENSMUST00000203665.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CGATCAGGACCGGCAGGCAAGGACGCAGCAGGCAGCCCTGCACACTaGAGGGGTCCAAGGAGATTGCGCGGCAGAGCGTCCTTTCCCTGG | + |
Preference number: 1 (lower is better) Translates to: RSGPAGKDAAGSPAH*RGPRRLRGRASFPW Trigger: CCAGGGAAAGGACGCTCTGCCGCGCAATCTCCTTGGACCCCTTCAGTGTGCAGGGCTGCCTGCTGCGTCCTTGCCTGCCGGTCCTGATCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 90 bp | GATACCCTGGGGCTCCTGCAGACTGCAGACCTCAGCCTGCCAGCCTaGAACTCCACACTGCACCGCTGGGCAGCAGCTGGTTGGCTGGAG | + |
Preference number: 1 (lower is better) Translates to: DTLGLLQTADLSLPA*NSTLHRWAAAGWLE Trigger: CTCCAGCCAACCAGCTGCTGCCCAGCGGTGCAGTGTGGAGTTTCAGGCTGGCAGGCTGAGGTCTGCAGTCTGCAGGAGCCCCAGGGTATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | TTCCCCGCGATACCCTGGGGCTCCTGCAGACTGCAGACCTCAGCCTaGCAGCCTGAAACTCCACACTGCACCGCTGGGCAGCAGCTGGTT | + |
Preference number: 1 (lower is better) Translates to: FPAIPWGSCRLQTSA*QPETPHCTAGQQLV Trigger: AACCAGCTGCTGCCCAGCGGTGCAGTGTGGAGTTTCAGGCTGGCAGGCTGAGGTCTGCAGTCTGCAGGAGCCCCAGGGTATCGCGGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | GGATCTCAAGGGCTCTGCCTTCTTGCCAGGCTGCCACCTAGCCCCTaGCTCTCTTCAGAGCCCGGAGGAGGTCCGTGTGCAGCCAGTTCA | + |
Preference number: 1 (lower is better) Translates to: GSQGLCLLARLPPSP*LSSEPGGGPCAASS Trigger: TGAACTGGCTGCACACGGACCTCCTCCGGGCTCTGAAGAGAGGCAGGGGCTAGGTGGCAGCCTGGCAAGAAGGCAGAGCCCTTGAGATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | GCTCCCTCTCTTCTTTCCCCGCGATACCCTGGGGCTCCTGCAGACTaGAGACCTCAGCCTGCCAGCCTGAAACTCCACACTGCACCGCTG | + |
Preference number: 1 (lower is better) Translates to: APSLLSPRYPGAPAD*RPQPASLKLHTAPL Trigger: CAGCGGTGCAGTGTGGAGTTTCAGGCTGGCAGGCTGAGGTCTGCAGTCTGCAGGAGCCCCAGGGTATCGCGGGGAAAGAAGAGAGGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | CTAGGTCCAATGGAGGCGGGGCCAGACTCAGGATCTCAAGGGCTCTaGCTTCTTGCCAGGCTGCCACCTAGCCCCTGCCTCTCTTCAGAG | + |
Preference number: 1 (lower is better) Translates to: LGPMEAGPDSGSQGL*LLARLPPSPCLSSE Trigger: CTCTGAAGAGAGGCAGGGGCTAGGTGGCAGCCTGGCAAGAAGGCAGAGCCCTTGAGATCCTGAGTCTGGCCCCGCCTCCATTGGACCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | TGTCGCCTGTCTCCTGCCTCATCTTTACTTCGCCGGCTTTGCTCCTaGCCGCTTCTCAGTCAGTCACCCACTCCTGCCCCTCTCGCCACT | + |
Preference number: 1 (lower is better) Translates to: CRLSPASSLLRRLCS*PLLSQSPTPAPLAT Trigger: AGTGGCGAGAGGGGCAGGAGTGGGTGACTGACTGAGAAGCGGGCAGGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | CATGCCTGTCGCCTGTCTCCTGCCTCATCTTTACTTCGCCGGCTTTaGTCCTGCCCGCTTCTCAGTCAGTCACCCACTCCTGCCCCTCTC | + |
Preference number: 1 (lower is better) Translates to: HACRLSPASSLLRRL*SCPLLSQSPTPAPL Trigger: GAGAGGGGCAGGAGTGGGTGACTGACTGAGAAGCGGGCAGGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | TCCTGCAGACTGCAGACCTCAGCCTGCCAGCCTGAAACTCCACACTaGACCGCTGGGCAGCAGCTGGTTGGCTGGAGAGTGGCAAGAACA | + |
Preference number: 1 (lower is better) Translates to: SCRLQTSACQPETPH*TAGQQLVGWRVART Trigger: TGTTCTTGCCACTCTCCAGCCAACCAGCTGCTGCCCAGCGGTGCAGTGTGGAGTTTCAGGCTGGCAGGCTGAGGTCTGCAGTCTGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | GTCACCCACTCCTGCCCCTCTCGCCACTACCTGGACCCTCCCCTCTaGTTTGAAGCTGAGGATCTGACTTCCTGCTCCCTTCTCCTTCTG | + |
Preference number: 1 (lower is better) Translates to: VTHSCPSRHYLDPPL*FEAEDLTSCSLLLL Trigger: CAGAAGGAGAAGGGAGCAGGAAGTCAGATCCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTAGTGGCGAGAGGGGCAGGAGTGGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | CCCTCTCCACAGCCACCAACCCTGACAATGGGCCTGAGAAGTCTATaGTGTACAAAACAGGCCAGGCTCGAGGGGCCAGTCACCAGTGAG | + |
Preference number: 1 (lower is better) Translates to: PSPQPPTLTMGLRSL*CTKQARLEGPVTSE Trigger: CTCACTGGTGACTGGCCCCTCGAGCCTGGCCTGTTTTGTACAGCATAGACTTCTCAGGCCCATTGTCAGGGTTGGTGGCTGTGGAGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | CAGCCTGAAACTCCACACTGCACCGCTGGGCAGCAGCTGGTTGGCTaGAGAGTGGCAAGAACACTGGTAGACGACTCCTCAGAGGGAACT | + |
Preference number: 1 (lower is better) Translates to: QPETPHCTAGQQLVG*RVARTLVDDSSEGT Trigger: AGTTCCCTCTGAGGAGTCGTCTACCAGTGTTCTTGCCACTCTCCAGCCAACCAGCTGCTGCCCAGCGGTGCAGTGTGGAGTTTCAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | CACACAGCACAGGTCCTTGGAGGACTGCCAGTCAGAGTCCTGGGATaGCTGGTGGCTCCTGCTCTCTTCTCAGGAATACCTCCTGTCCCA | + |
Preference number: 1 (lower is better) Translates to: HTAQVLGGLPVRVLG*LVAPALFSGIPPVP Trigger: TGGGACAGGAGGTATTCCTGAGAAGAGAGCAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGGACCTGTGCTGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | CCTTGGAGGACTGCCAGTCAGAGTCCTGGGATGGCTGGTGGCTCCTaGTCTCTTCTCAGGAATACCTCCTGTCCCACCCAAAAGCTAGCT | + |
Preference number: 1 (lower is better) Translates to: PWRTASQSPGMAGGS*SLLRNTSCPTQKLA Trigger: AGCTAGCTTTTGGGTGGGACAGGAGGTATTCCTGAGAAGAGAGCAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | CACAGGTCCTTGGAGGACTGCCAGTCAGAGTCCTGGGATGGCTGGTaGCTCCTGCTCTCTTCTCAGGAATACCTCCTGTCCCACCCAAAA | + |
Preference number: 1 (lower is better) Translates to: HRSLEDCQSESWDGW*LLLSSQEYLLSHPK Trigger: TTTTGGGTGGGACAGGAGGTATTCCTGAGAAGAGAGCAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGGACCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | CCTAACACACAGCACAGGTCCTTGGAGGACTGCCAGTCAGAGTCCTaGGATGGCTGGTGGCTCCTGCTCTCTTCTCAGGAATACCTCCTG | + |
Preference number: 1 (lower is better) Translates to: PNTQHRSLEDCQSES*DGWWLLLSSQEYLL Trigger: CAGGAGGTATTCCTGAGAAGAGAGCAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGGACCTGTGCTGTGTGTTAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | TCCATTCTCTCCATTCCTCCCTTTCCATGCCTGTCGCCTGTCTCCTaGCTCATCTTTACTTCGCCGGCTTTGCTCCTGCCCGCTTCTCAG | + |
Preference number: 1 (lower is better) Translates to: SILSIPPFPCLSPVS*LIFTSPALLLPASQ Trigger: CTGAGAAGCGGGCAGGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCATGGAAAGGGAGGAATGGAGAGAATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | ACAACACCAAGCTACCCTAACACACAGCACAGGTCCTTGGAGGACTaGCAGTCAGAGTCCTGGGATGGCTGGTGGCTCCTGCTCTCTTCT | + |
Preference number: 1 (lower is better) Translates to: TTPSYPNTQHRSLED*QSESWDGWWLLLSS Trigger: AGAAGAGAGCAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGGACCTGTGCTGTGTGTTAGGGTAGCTTGGTGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | GGAAGACAAGGGCAGTGGCCAAAGCTCAGGAGGAGGTGTCTACCCTaGAGGAGAGAGGAGAAAATGTGGAGATGGGATCTGGAACGTTCC | + |
Preference number: 1 (lower is better) Translates to: GRQGQWPKLRRRCLP*RREEKMWRWDLERS Trigger: GGAACGTTCCAGATCCCATCTCCACATTTTCTCCTCTCTCCTCCAGGGTAGACACCTCCTCCTGAGCTTTGGCCACTGCCCTTGTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCCATTCTCTCCATTCCTCCCTTTCCATaGCTGTCGCCTGTCTCCTGCCTCATCTTTACTTCGCCGGCTTTG | + |
Preference number: 1 (lower is better) Translates to: SLSLSLSILSIPPFP*LSPVSCLIFTSPAL Trigger: CAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCATGGAAAGGGAGGAATGGAGAGAATGGAGAGAGAGAGAGAGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | AGGAGGAGGTGTCTACCCTGGAGGAGAGAGGAGAAAATGTGGAGATaGGATCTGGAACGTTCCAAGTGTCAGGAATTCTGCCAGGAACCA | + |
Preference number: 1 (lower is better) Translates to: RRRCLPWRREEKMWR*DLERSKCQEFCQEP Trigger: TGGTTCCTGGCAGAATTCCTGACACTTGGAACGTTCCAGATCCCATCTCCACATTTTCTCCTCTCTCCTCCAGGGTAGACACCTCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | GGGCAGCAAGTGTTCTTAGGAAAACAGGCTCTCCAAGCACACACATaGCTGCCCTCCTCAATCCCTAGCGTTTCCTCTTCACACACATAC | + |
Preference number: 1 (lower is better) Translates to: GQQVFLGKQALQAHT*LPSSIPSVSSSHTY Trigger: GTATGTGTGTGAAGAGGAAACGCTAGGGATTGAGGAGGGCAGCCATGTGTGTGCTTGGAGAGCCTGTTTTCCTAAGAACACTTGCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 90 bp | ATTGCATTAAGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
Preference number: 1 (lower is better) Translates to: IALRMVVSHHVVAGI*TLDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCTTAATGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR TCA 90 bp | TCTCAGTCACCTCTGTCCCCTCACTTCACAGTGTGGGGCATCAGATaGTGGGAACCCACAACCTTTGAACCTCAGCCTGTTTGCTTAGTT | + |
Preference number: 1 (lower is better) Translates to: SQSPLSPHFTVWGIR*WEPTTFEPQPVCLV Trigger: AACTAAGCAAACAGGCTGAGGTTCAAAGGTTGTGGGTTCCCATCATCTGATGCCCCACACTGTGAAGTGAGGGGACAGAGGTGACTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR CCA 90 bp | GCATCAGATTGCATTAAGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
Preference number: 1 (lower is better) Translates to: ASDCIKDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCTTAATGCAATCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR CCA 90 bp | CCTCCATTTCCCACCTCCCAGGTTTCTTCATCTGCTGCCCATCCATaGAAAACCCATTCTAGTTCTTCACTTCTCCATCGTTGTGTGTGC | + |
Preference number: 1 (lower is better) Translates to: PPFPTSQVSSSAAHP*KTHSSSSLLHRCVC Trigger: GCACACACAACGATGGAGAAGTGAAGAACTAGAATGGGTTTTCCATGGATGGGCAGCAGATGAAGAAACCTGGGAGGTGGGAAATGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 90 bp | CCCAACAACGGGAAGCTCTTGGTTAGTGATCAGAAACAGAGATGTTaGTGTCCATATCCTATCCTTCCCCAAAGGCTAACACCAGCTCCC | + |
Preference number: 1 (lower is better) Translates to: PNNGKLLVSDQKQRC*CPYPILPQRLTPAP Trigger: GGGAGCTGGTGTTAGCCTTTGGGGAAGGATAGGATATGGACATCAACATCTCTGTTTCTGATCACTAACCAAGAGCTTCCCGTTGTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 90 bp | CTACGTCAACTGCCAGGAGGTCAGTTAGAGCCTCACCTGAGTTCTTaGCCGAAACATCCATTTTCTTTGTCCCTAACTCTTCTAAGCCTT | + |
Preference number: 1 (lower is better) Translates to: LRQLPGGQLEPHLSS*PKHPFSLSLTLLSL Trigger: AAGGCTTAGAAGAGTTAGGGACAAAGAAAATGGATGTTTCGGCCAAGAACTCAGGTGAGGCTCTAACTGACCTCCTGGCAGTTGACGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR TCA 90 bp | AGGCCAGGCCAGCCTCAGGCTGGAACTAGCTTCCTCCTCCCACAGCCTCCAGAGGGGTGCAGGCTTGAATaGGGGAGGCAGAGGAGGCCC | + |
Preference number: 2 (lower is better) Translates to: RPGQPQAGTSFLLPQPPEGCRLE*GRQRRP Trigger: GGGCCTCCTCTGCCTCCCTCATTCAAGCCTGCACCC...CTCTGGAGGCTGTGGGAGGAGGAAGCTAGTTCCAGCCTGAGGCTGGCCTGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | TGGACAGCCTATAGGAGGCACACATTCCTCGACACAAGGACCAGGCAGCAGGCCCAGAGGAGGCCCCGTTaGGGGGCTGGTGGCACCTGG | + |
Preference number: 2 (lower is better) Translates to: WTAYRRHTFLDTRTRQQAQRRPR*GAGGTW Trigger: CCAGGTGCCACCAGCCCCCCAACGGGGCCTCCTCTG...GGCCTGCTGCCTGGTCCTTGTGTCGAGGAATGTGTGCCTCCTATAGGCTGTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR TCA 90 bp | ACTCCTGCCCCTCTCGCCACTACCTGGACCCTCCCCTCTGGTTTGAAGCTGAGGTCCAAGCACTGCCCATaGGGTTGCAGACCCTGGGCT | + |
Preference number: 2 (lower is better) Translates to: TPAPLATTWTLPSGLKLRSKHCP*GCRPWA Trigger: AGCCCAGGGTCTGCAACCTCATGGGCAGTGCTTGGA...CCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTAGTGGCGAGAGGGGCAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 90 bp | CCATGCCTGTCGCCTGTCTCCTGCCTCATCTTTACTTCGCCGGCTTaGCTCCTGCCCGCTTCTCAGTCAGTCACCCACTCCTGCCCCTCT | + |
Preference number: 2 (lower is better) Translates to: PCLSPVSCLIFTSPA*LLPASQSVTHSCPS Trigger: AGAGGGGCAGGAGTGGGTGACTGACTGAGAAGCGGGCAGGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | CACCTACCTCAGCTCCAAGCACTGCCCATGAGGTTGCAGACCCTGGGCTTATCGAGAGCGTCCTTTCCCTaGGGATCCCCAGGGACCTCC | + |
Preference number: 2 (lower is better) Translates to: HLPQLQALPMRLQTLGLSRASFP*GSPGTS Trigger: GGAGGTCCCTGGGGATCCCCAGGGAAAGGACGCTCT...CGATAAGCCCAGGGTCTGCAACCTCATGGGCAGTGCTTGGAGCTGAGGTAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR TCA 90 bp | GCCTCCTGGACAGCCTATAGGAGGCACACATTCCTCGACACAAGGACCAGGCAGGGCAGCCCTGCACACTaGAGGGGTCCAAGGAGATTG | + |
Preference number: 2 (lower is better) Translates to: ASWTAYRRHTFLDTRTRQGSPAH*RGPRRL Trigger: CAATCTCCTTGGACCCCTTCAGTGTGCAGGGCTGCC...CTGCCTGGTCCTTGTGTCGAGGAATGTGTGCCTCCTATAGGCTGTCCAGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR TCA 90 bp | ACTCCTGCCCCTCTCGCCACTACCTGGACCCTCCCCTCTGGTTTGAAGCTGAGGCGGCTCAGATTCTTTTaGGAGCTGGGTGCAGGCTTG | + |
Preference number: 2 (lower is better) Translates to: TPAPLATTWTLPSGLKLRRLRFF*ELGAGL Trigger: CAAGCCTGCACCCAGCTCTCAAAAGAATCTGAGCCG...CCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTAGTGGCGAGAGGGGCAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR TCA 90 bp | TTCCATGCCTGTCGCCTGTCTCCTGCCTCATCTTTACTTCGCCGGCTTTGCTCCAGCTGGGTGCAGGCTTaGATGAGGGAGGCAGAGGAG | + |
Preference number: 2 (lower is better) Translates to: FHACRLSPASSLLRRLCSSWVQA*MREAEE Trigger: CTCCTCTGCCTCCCTCATTCAAGCCTGCACCCAGCT...GGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCATGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR TCA 90 bp | GCCTCCTGGACAGCCTATAGGAGGCACACATTCCTCGACACAAGGACCAGGCAGGGGGCCAGTCACCAGTaGGATATCCCAGTAGGGAAG | + |
Preference number: 2 (lower is better) Translates to: ASWTAYRRHTFLDTRTRQGASHQ*DIPVGK Trigger: CTTCCCTACTGGGATATCTCACTGGTGACTGGCCCC...CTGCCTGGTCCTTGTGTCGAGGAATGTGTGCCTCCTATAGGCTGTCCAGGAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 90 bp | CGGAGGAGGTCCGTGTGCAGCCAGTTCAAGATTTGGGTCTGGAGCTaGAACGCAGGAATGAGAGGGCAGCAGACGGGATATGCTGAGGTC | + |
Preference number: 2 (lower is better) Translates to: RRRSVCSQFKIWVWS*NAGMRGQQTGYAEV Trigger: GACCTCAGCATATCCCGTCTGCTGCCCTCTCATTCCTGCGTTCAAGCTCCAGACCCAAATCTTGAACTGGCTGCACACGGACCTCCTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR GCA 90 bp | ACTCCTGCCCCTCTCGCCACTACCTGGACCCTCCCCTCTGGTTTGAAGCTGAGGGGCCTGAGAAGTCTATaGTGTACAAAACAGGCCAGG | + |
Preference number: 2 (lower is better) Translates to: TPAPLATTWTLPSGLKLRGLRSL*CTKQAR Trigger: CCTGGCCTGTTTTGTACAGCATAGACTTCTCAGGCC...CCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTAGTGGCGAGAGGGGCAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR GCA 90 bp | TGCTCTCTTCTCAGGAATACCTCCTGTCCCACCCAAAAGCTAGCTCTGAGCCAGAAGTCCCCACCTCTGTaGCCCCTCTCCACAGCCACC | + |
Preference number: 2 (lower is better) Translates to: CSLLRNTSCPTQKLALSQKSPPL*PLSTAT Trigger: GGTGGCTGTGGAGAGGGGGCACAGAGGTGGGGACTT...CTGGCTCAGAGCTAGCTTTTGGGTGGGACAGGAGGTATTCCTGAGAAGAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR GCA 90 bp | CCTTCCTCTCTGTCATTAGCCCACCTCTATCTAACACAGCCTGGCCTGCTCGGTGGATCTCAAGGGCTCTaGCTTCTTGCCAGGCTGCCA | + |
Preference number: 2 (lower is better) Translates to: PSSLSLAHLYLTQPGLLGGSQGL*LLARLP Trigger: TGGCAGCCTGGCAAGAAGGCAGAGCCCTTGAGATCC...ACCGAGCAGGCCAGGCTGTGTTAGATAGAGGTGGGCTAATGACAGAGAGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | CCCCTCCATTTCCCACCTCCCAGGTTTCTTCATCTGCTGCCCATCCATGGAAAAGGGGCTGGTGGCACCTaGAGCTTTGTGGCAGATGTG | + |
Preference number: 2 (lower is better) Translates to: PLHFPPPRFLHLLPIHGKGAGGT*SFVADV Trigger: CACATCTGCCACAAAGCTCCAGGTGCCACCAGCCCC...TTTTCCATGGATGGGCAGCAGATGAAGAAACCTGGGAGGTGGGAAATGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR TCA 90 bp | CTCTCCAAGCACACACATGGCTGCCCTCCTCAATCCCTAGCGTTTCCTCTTCACCTCCCCCTCAGACTCTaGGGTGATGAAGGACTACCA | + |
Preference number: 2 (lower is better) Translates to: LSKHTHGCPPQSLAFPLHLPLRL*GDEGLP Trigger: TGGTAGTCCTTCATCACCTCAGAGTCTGAGGGGGAG...GTGAAGAGGAAACGCTAGGGATTGAGGAGGGCAGCCATGTGTGTGCTTGGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | TACCTGGACCCTCCCCTCTGGTTTGAAGCTGAGGATCTGACTTCCTGCTCCCTTCCATTCCCAGTCTCCTaGCTACCTGCTGAAGATGAC | + |
Preference number: 2 (lower is better) Translates to: YLDPPLWFEAEDLTSCSLPFPVS*LPAEDD Trigger: GTCATCTTCAGCAGGTAGCCAGGAGACTGGGAATGG...AAGGGAGCAGGAAGTCAGATCCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | TGGACAGCCTATAGGAGGCACACATTCCTCGACACAAGGACCAGGCAGCAGGCCTTCAAGATTTGGGTCTaGAGCTTGAACGCAGGAATG | + |
Preference number: 2 (lower is better) Translates to: WTAYRRHTFLDTRTRQQAFKIWV*SLNAGM Trigger: CATTCCTGCGTTCAAGCTCCAGACCCAAATCTTGAA...GGCCTGCTGCCTGGTCCTTGTGTCGAGGAATGTGTGCCTCCTATAGGCTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | TTCCATGCCTGTCGCCTGTCTCCTGCCTCATCTTTACTTCGCCGGCTTTGCTCCTTGTGGCAGATGTGGTaGGACCATCATCAGCGAATA | + |
Preference number: 2 (lower is better) Translates to: FHACRLSPASSLLRRLCSLWQMW*DHHQRI Trigger: TATTCGCTGATGATGGTCCCACCACATCTGCCACAA...GGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | CCACAGCCACCAACCCTGACAATGGGCCTGAGAAGTCTATGCTGTACAAAACAGGCACCTGGAGCTTTGTaGCAGATGTGGTGGGACCAT | + |
Preference number: 2 (lower is better) Translates to: PQPPTLTMGLRSLCCTKQAPGAL*QMWWDH Trigger: ATGGTCCCACCACATCTGCCACAAAGCTCCAGGTGC...CTGTTTTGTACAGCATAGACTTCTCAGGCCCATTGTCAGGGTTGGTGGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | CCTTCCTCTCTGTCATTAGCCCACCTCTATCTAACACAGCCTGGCCTGCTCGGTAGGAGGTGTCTACCCTaGAGGAGAGAGGAGAAAATG | + |
Preference number: 2 (lower is better) Translates to: PSSLSLAHLYLTQPGLLGRRCLP*RREEKM Trigger: CATTTTCTCCTCTCTCCTCCAGGGTAGACACCTCCT...ACCGAGCAGGCCAGGCTGTGTTAGATAGAGGTGGGCTAATGACAGAGAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | CCTTGTACACACACAGTTCTCTCCAAAGGATCAGAGCTACCGCAGACACCAAGAGGTTGGGACAAGAGCTaGGGAAGACAAGGGCAGTGG | + |
Preference number: 2 (lower is better) Translates to: PCTHTVLSKGSELPQTPRGWDKS*GRQGQW Trigger: CCACTGCCCTTGTCTTCCCCAGCTCTTGTCCCAACC...TCTTGGTGTCTGCGGTAGCTCTGATCCTTTGGAGAGAACTGTGTGTGTACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 90 bp | GATTGCATTAAGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
Preference number: 2 (lower is better) Translates to: DCIKDGCEPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCTTAATGCAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
||
3UTR-3UTR TCA 90 bp | TGCTCTCTTCTCAGGAATACCTCCTGTCCCACCCAAAAGCTAGCTCTGAGCCAGGAGGCTGGACCCCATTaGAGCTATAACTGCTTTCTC | + |
Preference number: 2 (lower is better) Translates to: CSLLRNTSCPTQKLALSQEAGPH*SYNCFL Trigger: GAGAAAGCAGTTATAGCTTCAATGGGGTCCAGCCTC...CTGGCTCAGAGCTAGCTTTTGGGTGGGACAGGAGGTATTCCTGAGAAGAGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR GCA 90 bp | CCTTGTACACACACAGTTCTCTCCAAAGGATCAGAGCTACCGCAGACACCAAGACGGAGGAGGTCCGTGTaGAGCCAGTTCAAGATTTGG | + |
Preference number: 2 (lower is better) Translates to: PCTHTVLSKGSELPQTPRRRRSV*SQFKIW Trigger: CCAAATCTTGAACTGGCTGCACACGGACCTCCTCCG...TCTTGGTGTCTGCGGTAGCTCTGATCCTTTGGAGAGAACTGTGTGTGTACAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | TATAACTGCTTTCTCCTCTCCCCTCTCTGTCAAGAGCAAAGAAATCCGCTAACACAGGTAGGGTCCTGCTaGGGCAGCCTTGGGTCATGG | + |
Preference number: 2 (lower is better) Translates to: YNCFLLSPLCQEQRNPLTQVGSC*GSLGSW Trigger: CCATGACCCAAGGCTGCCCCAGCAGGACCCTACCTG...TGTTAGCGGATTTCTTTGCTCTTGACAGAGAGGGGAGAGGAGAAAGCAGTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 90 bp | CAAGTTAGGCAGAAAAGTATCAAAGACGCAAGACAGTCTCTGCCCTaGGCAGATGTCCAGGGTGTAGGAAGCATGAGAAGGAGAGGGGTA | + |
Preference number: 2 (lower is better) Translates to: QVRQKSIKDARQSLP*ADVQGVGSMRRRGV Trigger: TACCCCTCTCCTTCTCATGCTTCCTACACCCTGGACATCTGCCAAGGGCAGAGACTGTCTTGCGTCTTTGATACTTTTCTGCCTAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 90 bp | CCATTTTCTTTGTCCCTAACTCTTCTAAGCCTTCAAGACCACATTTaGGTTCCCATTGCTCCCTCTCTTCTTTCCCCGCGATACCCTGGG | + |
Preference number: 2 (lower is better) Translates to: PFSLSLTLLSLQDHI*VPIAPSLLSPRYPG Trigger: CCCAGGGTATCGCGGGGAAAGAAGAGAGGGAGCAATGGGAACCAAAATGTGGTCTTGAAGGCTTAGAAGAGTTAGGGACAAAGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 90 bp | CCTACGTCAACTGCCAGGAGGTCAGTTAGAGCCTCACCTGAGTTCTaGGCCGAAACATCCATTTTCTTTGTCCCTAACTCTTCTAAGCCT | + |
Preference number: 2 (lower is better) Translates to: PTSTARRSVRASPEF*AETSIFFVPNSSKP Trigger: AGGCTTAGAAGAGTTAGGGACAAAGAAAATGGATGTTTCGGCCAAGAACTCAGGTGAGGCTCTAACTGACCTCCTGGCAGTTGACGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR GCA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTTTGAGTGTATTTATGTaGACTATGTGGACAGTGCCA | + |
Preference number: 2 (lower is better) Translates to: PPCGCWDLNSGPSEEQSGLSVFM*TMWTVP Trigger: TGGCACTGTCCACATAGTGCACATAAATACACTCAA...ACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR-3UTR CCA 90 bp | TTGTACACACACAGTTCTCTCCAAAGGATCAGAGCTACCGCAGACACCAAGAAGAGCCAGTTCAAGATTTaGGTCTGGAGCTTGAACGCA | + |
Preference number: 2 (lower is better) Translates to: LYTHSSLQRIRATADTKKSQFKI*VWSLNA Trigger: TGCGTTCAAGCTCCAGACCCAAATCTTGAACTGGCT...CTTCTTGGTGTCTGCGGTAGCTCTGATCCTTTGGAGAGAACTGTGTGTGTACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | CCCCTCCATTTCCCACCTCCCAGGTTTCTTCATCTGCTGCCCATCCATGGAAAATTTTCTATGATTAGATaGCTCTGCCACCAGATCCAT | + |
Preference number: 2 (lower is better) Translates to: PLHFPPPRFLHLLPIHGKFSMIR*LCHQIH Trigger: ATGGATCTGGTGGCAGAGCCATCTAATCATAGAAAA...TTTTCCATGGATGGGCAGCAGATGAAGAAACCTGGGAGGTGGGAAATGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | TTTCTTCATCTGCTGCCCATCCATGGAAAACCCATTCTAGTTCTTCACTTCTCCCTGCCACCCCTCCACTaGAAACTGGAGGCTTTTCTA | + |
Preference number: 2 (lower is better) Translates to: FLHLLPIHGKPILVLHFSLPPLH*KLEAFL Trigger: TAGAAAAGCCTCCAGTTTCCAGTGGAGGGGTGGCAG...GGAGAAGTGAAGAACTAGAATGGGTTTTCCATGGATGGGCAGCAGATGAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CCA 90 bp | CCTTGTACACACACAGTTCTCTCCAAAGGATCAGAGCTACCGCAGACACCAAGAAGAGAGGAGAAAATGTaGAGATGGGATCTGGAACGT | + |
Preference number: 2 (lower is better) Translates to: PCTHTVLSKGSELPQTPRREEKM*RWDLER Trigger: ACGTTCCAGATCCCATCTCCACATTTTCTCCTCTCT...TCTTGGTGTCTGCGGTAGCTCTGATCCTTTGGAGAGAACTGTGTGTGTACAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 90 bp | CAGTTAGAGCCTCACCTGAGTTCTTGGCCGAAACATCCATTTTCTTaGTCCCTAACTCTTCTAAGCCTTCAAGACCACATTTTGGTTCCC | + |
Preference number: 2 (lower is better) Translates to: QLEPHLSSWPKHPFS*SLTLLSLQDHILVP Trigger: GGGAACCAAAATGTGGTCTTGAAGGCTTAGAAGAGTTAGGGACAAAGAAAATGGATGTTTCGGCCAAGAACTCAGGTGAGGCTCTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 90 bp | AATCCAGCAGCAGAAGGGGGCGGGACCAAAAGAAATGTTACCAAATaGGACAGTGAACATCTAAGACACATTCAGACAGAACTTACTAGT | + |
Preference number: 2 (lower is better) Translates to: NPAAEGGGTKRNVTK*DSEHLRHIQTELTS Trigger: ACTAGTAAGTTCTGTCTGAATGTGTCTTAGATGTTCACTGTCCAATTTGGTAACATTTCTTTTGGTCCCGCCCCCTTCTGCTGCTGGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR TCA 90 bp | ACACACTGCTCAGTCACTTCTGAACTTTCCTTTTCCCTCTCCACATATAGTTTCGCCAGAAGAGGACGTTaGATCTCTAGAACTAGACTT | + |
Preference number: 2 (lower is better) Translates to: THCSVTSELSFSLSTYSFARRGR*ISRTRL Trigger: AAGTCTAGTTCTAGAGATTCAACGTCCTCTTCTGGC...GAAACTATATGTGGAGAGGGAAAAGGAAAGTTCAGAAGTGACTGAGCAGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCCAGGGGACAAATTTTCCAGGAATCGTTTAAGTGTATaGGTGATTTTGCTTGAGTGT | + |
Preference number: 2 (lower is better) Translates to: VCVCVCVCVCKPGDKFSRNRLSV*VILLEC Trigger: ACACTCAAGCAAAATCACCCATACACTTAAACGATT...CCTGGAAAATTTGTCCCCTGGCTTACACACACACACACACACACACACACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR-3UTR GCA 90 bp | CACACTGCTCAGTCACTTCTGAACTTTCCTTTTCCCTCTCCACATATAGTTTCTGAACCTCAGCCTGTTTaGTTAGTTTTCAGGTTCTCT | + |
Preference number: 2 (lower is better) Translates to: HTAQSLLNFPFPSPHIVSEPQPV*LVFRFS Trigger: AGAGAACCTGAAAACTAAGCAAACAGGCTGAGGTTC...AGAAACTATATGTGGAGAGGGAAAAGGAAAGTTCAGAAGTGACTGAGCAGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR GCA 72 bp | GGGCTCTGCCTTCTTGCCAGGCTGCCACCTAGCCCCTaGCTCTCTTCAGAGCCCGGAGGAGGTCCGTGTGCA | + |
Preference number: 3 (lower is better) Translates to: GLCLLARLPPSP*LSSEPGGGPCA Trigger: TGCACACGGACCTCCTCCGGGCTCTGAAGAGAGGCAGGGGCTAGGTGGCAGCCTGGCAAGAAGGCAGAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | ATCAGGACCGGCAGGCAAGGACGCAGCAGGCAGCCCTaGACACTGAAGGGGTCCAAGGAGATTGCGCGGCAG | + |
Preference number: 3 (lower is better) Translates to: IRTGRQGRSRQP*TLKGSKEIARQ Trigger: CTGCCGCGCAATCTCCTTGGACCCCTTCAGTGTGCAGGGCTGCCTGCTGCGTCCTTGCCTGCCGGTCCTGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | CTGCAGACCTCAGCCTGCCAGCCTGAAACTCCACACTaGACCGCTGGGCAGCAGCTGGTTGGCTGGAGAGTG | + |
Preference number: 3 (lower is better) Translates to: LQTSACQPETPH*TAGQQLVGWRV Trigger: CACTCTCCAGCCAACCAGCTGCTGCCCAGCGGTGCAGTGTGGAGTTTCAGGCTGGCAGGCTGAGGTCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | TCTGGCTCCAGGGAGGGACCAGGTTGGGACAAGAGCTaGGGAAGACAAGGGCAGTGGCCAAAGCTCAGGAGG | + |
Preference number: 3 (lower is better) Translates to: SGSREGPGWDKS*GRQGQWPKLRR Trigger: CCTCCTGAGCTTTGGCCACTGCCCTTGTCTTCCCCAGCTCTTGTCCCAACCTGGTCCCTCCCTGGAGCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CAA 90 bp | ATGCCTGTCGCCTGTCTCCTGCCTCATCTTTACTTCGCCGGCTTTGCTCCTGCCAAGGGCTCTGCCTTCTaGCCAGGCTGCCACCTAGCC | + |
Preference number: 3 (lower is better) Translates to: MPVACLLPHLYFAGFAPAKGSAF*PGCHLA Trigger: GGCTAGGTGGCAGCCTGGCAAGAAGGCAGAGCCCTT...GGCAGGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | TCCCTCTCTTCTTTCCCCGCGATACCCTGGGGCTCCTaGAGACTGCAGACCTCAGCCTGCCAGCCTGAAACT | + |
Preference number: 3 (lower is better) Translates to: SLSSFPAIPWGS*RLQTSACQPET Trigger: AGTTTCAGGCTGGCAGGCTGAGGTCTGCAGTCTGCAGGAGCCCCAGGGTATCGCGGGGAAAGAAGAGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | GTAGGGTCCTGCTGGGGCAGCCTTGGGTCATGGGCCTaGCTCAGGAATCCTAACTCAGCTCCAAGTCCTCTG | + |
Preference number: 3 (lower is better) Translates to: VGSCWGSLGSWA*LRNPNSAPSPL Trigger: CAGAGGACTTGGAGCTGAGTTAGGATTCCTGAGCCAGGCCCATGACCCAAGGCTGCCCCAGCAGGACCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | CCAGGAACCAGCATCAGATTCCAGGTAGGGTCCTGCTaGGGCAGCCTTGGGTCATGGGCCTGGCTCAGGAAT | + |
Preference number: 3 (lower is better) Translates to: PGTSIRFQVGSC*GSLGSWAWLRN Trigger: ATTCCTGAGCCAGGCCCATGACCCAAGGCTGCCCCAGCAGGACCCTACCTGGAATCTGATGCTGGTTCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CAA 90 bp | CGCCACTACCTGGACCCTCCCCTCTGGTTTGAAGCTGAGGATCTGACTTCCTGCGTGGCACCTGGAGCTTaGTGGCAGATGTGGTGGGAC | + |
Preference number: 3 (lower is better) Translates to: RHYLDPPLWFEAEDLTSCVAPGA*WQMWWD Trigger: GTCCCACCACATCTGCCACAAAGCTCCAGGTGCCAC...GCAGGAAGTCAGATCCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTAGTGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CAA 90 bp | GCCTCCTGGACAGCCTATAGGAGGCACACATTCCTCGACACAAGGACCAGGCAGGCACTGCCCATGAGGTaGCAGACCCTGGGCTTATCG | + |
Preference number: 3 (lower is better) Translates to: ASWTAYRRHTFLDTRTRQALPMR*QTLGLS Trigger: CGATAAGCCCAGGGTCTGCAACCTCATGGGCAGTGC...CTGCCTGGTCCTTGTGTCGAGGAATGTGTGCCTCCTATAGGCTGTCCAGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 72 bp | CACAGCCTCCAGAGCCCGTGTCTCCCCCTCAGACTCTaGGGTGATGAAGGACTACCAGCAGCAGGAAGGAAG | + |
Preference number: 3 (lower is better) Translates to: HSLQSPCLPLRL*GDEGLPAAGRK Trigger: CTTCCTTCCTGCTGCTGGTAGTCCTTCATCACCTCAGAGTCTGAGGGGGAGACACGGGCTCTGGAGGCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | TCTCCTGCCTCATCTTTACTTCGCCGGCTTTGCTCCTaGCCGCTTCTCAGTCAGTCACCCACTCCTGCCCCT | + |
Preference number: 3 (lower is better) Translates to: SPASSLLRRLCS*PLLSQSPTPAP Trigger: AGGGGCAGGAGTGGGTGACTGACTGAGAAGCGGGCAGGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | AGCTACCCTAACACACAGCACAGGTCCTTGGAGGACTaGCAGTCAGAGTCCTGGGATGGCTGGTGGCTCCTG | + |
Preference number: 3 (lower is better) Translates to: SYPNTQHRSLED*QSESWDGWWLL Trigger: CAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGGACCTGTGCTGTGTGTTAGGGTAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | TTCCAGGTAGGGTCCTGCTGGGGCAGCCTTGGGTCATaGGCCTGGCTCAGGAATCCTAACTCAGCTCCAAGT | + |
Preference number: 3 (lower is better) Translates to: FQVGSCWGSLGS*AWLRNPNSAPS Trigger: ACTTGGAGCTGAGTTAGGATTCCTGAGCCAGGCCCATGACCCAAGGCTGCCCCAGCAGGACCCTACCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | ACTCCACACTGCACCGCTGGGCAGCAGCTGGTTGGCTaGAGAGTGGCAAGAACACTGGTAGACGACTCCTCA | + |
Preference number: 3 (lower is better) Translates to: TPHCTAGQQLVG*RVARTLVDDSS Trigger: TGAGGAGTCGTCTACCAGTGTTCTTGCCACTCTCCAGCCAACCAGCTGCTGCCCAGCGGTGCAGTGTGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | CAGCACAGGTCCTTGGAGGACTGCCAGTCAGAGTCCTaGGATGGCTGGTGGCTCCTGCTCTCTTCTCAGGAA | + |
Preference number: 3 (lower is better) Translates to: QHRSLEDCQSES*DGWWLLLSSQE Trigger: TTCCTGAGAAGAGAGCAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGGACCTGTGCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CAA 90 bp | ATGCCTGTCGCCTGTCTCCTGCCTCATCTTTACTTCGCCGGCTTTGCTCCTGCCAGACAGTCTCTGCCCTaGGCAGATGTCCAGGGTGTA | + |
Preference number: 3 (lower is better) Translates to: MPVACLLPHLYFAGFAPARQSLP*ADVQGV Trigger: TACACCCTGGACATCTGCCAAGGGCAGAGACTGTCT...GGCAGGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 72 bp | TGCACACACACCTACCTCAGCTCCAAGCACTGCCCATaGGGTTGCAGACCCTGGGCTTATCGCAAGGCGAGA | + |
Preference number: 3 (lower is better) Translates to: CTHTYLSSKHCP*GCRPWAYRKAR Trigger: TCTCGCCTTGCGATAAGCCCAGGGTCTGCAACCTCATGGGCAGTGCTTGGAGCTGAGGTAGGTGTGTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | CAGCCACCAACCCTGACAATGGGCCTGAGAAGTCTATaGTGTACAAAACAGGCCAGGCTCGAGGGGCCAGTC | + |
Preference number: 3 (lower is better) Translates to: QPPTLTMGLRSL*CTKQARLEGPV Trigger: GACTGGCCCCTCGAGCCTGGCCTGTTTTGTACAGCATAGACTTCTCAGGCCCATTGTCAGGGTTGGTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | CCTCCCCTCTGGTTTGAAGCTGAGGATCTGACTTCCTaGTCCCTTCTCCTTCTGACAAGGCTCCCCCACCCT | + |
Preference number: 3 (lower is better) Translates to: PPLWFEAEDLTS*SLLLLTRLPHP Trigger: AGGGTGGGGGAGCCTTGTCAGAAGGAGAAGGGAGCAGGAAGTCAGATCCTCAGCTTCAAACCAGAGGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | TCCATTCCTCCCTTTCCATGCCTGTCGCCTGTCTCCTaGCTCATCTTTACTTCGCCGGCTTTGCTCCTGCCC | + |
Preference number: 3 (lower is better) Translates to: SIPPFPCLSPVS*LIFTSPALLLP Trigger: GGGCAGGAGCAAAGCCGGCGAAGTAAAGATGAGGCAGGAGACAGGCGACAGGCATGGAAAGGGAGGAATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | ACTGCCAGTCAGAGTCCTGGGATGGCTGGTGGCTCCTaGTCTCTTCTCAGGAATACCTCCTGTCCCACCCAA | + |
Preference number: 3 (lower is better) Translates to: TASQSPGMAGGS*SLLRNTSCPTQ Trigger: TTGGGTGGGACAGGAGGTATTCCTGAGAAGAGAGCAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | CAGGTCCTTGGAGGACTGCCAGTCAGAGTCCTGGGATaGCTGGTGGCTCCTGCTCTCTTCTCAGGAATACCT | + |
Preference number: 3 (lower is better) Translates to: QVLGGLPVRVLG*LVAPALFSGIP Trigger: AGGTATTCCTGAGAAGAGAGCAGGAGCCACCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 72 bp | AGTAGGAAAGAGTCTGGCCCTCCTGGGGCAGTGTGTTaGGTAAGTCTCTTTAGGCGATCAGGACCGGCAGGC | + |
Preference number: 3 (lower is better) Translates to: SRKESGPPGAVC*VSLFRRSGPAG Trigger: GCCTGCCGGTCCTGATCGCCTAAAGAGACTTACTCAACACACTGCCCCAGGAGGGCCAGACTCTTTCCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | GGGCAGTGGCCAAAGCTCAGGAGGAGGTGTCTACCCTaGAGGAGAGAGGAGAAAATGTGGAGATGGGATCTG | + |
Preference number: 3 (lower is better) Translates to: GQWPKLRRRCLP*RREEKMWRWDL Trigger: CAGATCCCATCTCCACATTTTCTCCTCTCTCCTCCAGGGTAGACACCTCCTCCTGAGCTTTGGCCACTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 72 bp | CCTATCCTTTCCCCCTCAGCACGGCTCAGATTCTTTTaGGAGCTGGGTGCAGGCTTGAATGAGGGAGGCAGA | + |
Preference number: 3 (lower is better) Translates to: PILSPSARLRFF*ELGAGLNEGGR Trigger: TCTGCCTCCCTCATTCAAGCCTGCACCCAGCTCTCAAAAGAATCTGAGCCGTGCTGAGGGGGAAAGGATAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 72 bp | AGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TLDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR-3UTR CAA 90 bp | TACCTGGACCCTCCCCTCTGGTTTGAAGCTGAGGATCTGACTTCCTGCTCCCTTACGGCTCAGATTCTTTaGAGAGCTGGGTGCAGGCTT | + |
Preference number: 3 (lower is better) Translates to: YLDPPLWFEAEDLTSCSLTAQIL*RAGCRL Trigger: AAGCCTGCACCCAGCTCTCAAAAGAATCTGAGCCGT...AAGGGAGCAGGAAGTCAGATCCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | CTACCGCAGACACCAAGAAGTCAATTCTATCCTGTCTaGCAAAGCACAAGGGACCCCCTGGGCAGCAAGTGT | + |
Preference number: 3 (lower is better) Translates to: LPQTPRSQFYPV*QSTRDPLGSKC Trigger: ACACTTGCTGCCCAGGGGGTCCCTTGTGCTTTGGCAGACAGGATAGAATTGACTTCTTGGTGTCTGCGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CAA 90 bp | TCTCCACATATAGTTTCTCAGTCACCTCTGTCCCCTCACTTCACAGTGTGGGGCGGGAACCCACAACCTTaGAACCTCAGCCTGTTTGCT | + |
Preference number: 3 (lower is better) Translates to: SPHIVSQSPLSPHFTVWGGNPQP*NLSLFA Trigger: AGCAAACAGGCTGAGGTTCAAAGGTTGTGGGTTCCC...GCCCCACACTGTGAAGTGAGGGGACAGAGGTGACTGAGAAACTATATGTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR TCA 72 bp | TCTAAACAGTGCTCTGGAGCAGAGGCTGGACCCCATTaGAGCTATAACTGCTTTCTCCTCTCCCCTCTCTGT | + |
Preference number: 3 (lower is better) Translates to: SKQCSGAEAGPH*SYNCFLLSPLC Trigger: ACAGAGAGGGGAGAGGAGAAAGCAGTTATAGCTTCAATGGGGTCCAGCCTCTGCTCCAGAGCACTGTTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
||
3UTR CCA 72 bp | CCTGGAGGAGAGAGGAGAAAATGTGGAGATGGGATCTaGAACGTTCCAAGTGTCAGGAATTCTGCCAGGAAC | + |
Preference number: 3 (lower is better) Translates to: PGGERRKCGDGI*NVPSVRNSARN Trigger: GTTCCTGGCAGAATTCCTGACACTTGGAACGTTCCAGATCCCATCTCCACATTTTCTCCTCTCTCCTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
||
3UTR CCA 72 bp | GTGTTCTTAGGAAAACAGGCTCTCCAAGCACACACATaGCTGCCCTCCTCAATCCCTAGCGTTTCCTCTTCA | + |
Preference number: 3 (lower is better) Translates to: VFLGKQALQAHT*LPSSIPSVSSS Trigger: TGAAGAGGAAACGCTAGGGATTGAGGAGGGCAGCCATGTGTGTGCTTGGAGAGCCTGTTTTCCTAAGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
||
3UTR CCA 72 bp | AATTCTATCCTGTCTGCCAAAGCACAAGGGACCCCCTaGGCAGCAAGTGTTCTTAGGAAAACAGGCTCTCCA | + |
Preference number: 3 (lower is better) Translates to: NSILSAKAQGTP*AASVLRKTGSP Trigger: TGGAGAGCCTGTTTTCCTAAGAACACTTGCTGCCCAGGGGGTCCCTTGTGCTTTGGCAGACAGGATAGAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CCA 72 bp | TGCATTAAGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCG | + |
Preference number: 3 (lower is better) Translates to: CIKDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCTTAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
||
3UTR-3UTR CAA 90 bp | TTGTACACACACAGTTCTCTCCAAAGGATCAGAGCTACCGCAGACACCAAGAAGATTTGGGTCTGGAGCTaGAACGCAGGAATGAGAGGG | + |
Preference number: 3 (lower is better) Translates to: LYTHSSLQRIRATADTKKIWVWS*NAGMRG Trigger: CCCTCTCATTCCTGCGTTCAAGCTCCAGACCCAAAT...CTTCTTGGTGTCTGCGGTAGCTCTGATCCTTTGGAGAGAACTGTGTGTGTACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CAA 90 bp | TGCTCTCTTCTCAGGAATACCTCCTGTCCCACCCAAAAGCTAGCTCTGAGCCAGAACAACGGGAAGCTCTaGGTTAGTGATCAGAAACAG | + |
Preference number: 3 (lower is better) Translates to: CSLLRNTSCPTQKLALSQNNGKL*VSDQKQ Trigger: CTGTTTCTGATCACTAACCAAGAGCTTCCCGTTGTT...CTGGCTCAGAGCTAGCTTTTGGGTGGGACAGGAGGTATTCCTGAGAAGAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | GTGTCCTCGGAGACATTATGTTTGATGACGTTCGTCTaGCACCCCTCCACTGGAAACTGGAGGCTTTTCTAT | + |
Preference number: 3 (lower is better) Translates to: VSSETLCLMTFV*HPSTGNWRLFY Trigger: ATAGAAAAGCCTCCAGTTTCCAGTGGAGGGGTGGCAGACGAACGTCATCAAACATAATGTCTCCGAGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | AAGAACACTGGTAGACGACTCCTCAGAGGGAACTCATaGCCTTCCTCTCTGTCATTAGCCCACCTCTATCTA | + |
Preference number: 3 (lower is better) Translates to: KNTGRRLLRGNS*PSSLSLAHLYL Trigger: TAGATAGAGGTGGGCTAATGACAGAGAGGAAGGGCATGAGTTCCCTCTGAGGAGTCGTCTACCAGTGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | GATTGCATTAAGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
Preference number: 3 (lower is better) Translates to: DCIKDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCTTAATGCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
||
3UTR CCA 72 bp | CCCACCTCCCAGGTTTCTTCATCTGCTGCCCATCCATaGAAAACCCATTCTAGTTCTTCACTTCTCCATCGT | + |
Preference number: 3 (lower is better) Translates to: PTSQVSSSAAHP*KTHSSSSLLHR Trigger: ACGATGGAGAAGTGAAGAACTAGAATGGGTTTTCCATGGATGGGCAGCAGATGAAGAAACCTGGGAGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR TCA 72 bp | AGTGTGGGGCATCAGATGATGGGAACCCACAACCTTTaGACCTCAGCCTGTTTGCTTAGTTTTCAGGTTCTC | + |
Preference number: 3 (lower is better) Translates to: SVGHQMMGTHNL*TSACLLSFQVL Trigger: GAGAACCTGAAAACTAAGCAAACAGGCTGAGGTTCAAAGGTTGTGGGTTCCCATCATCTGATGCCCCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR CCA 72 bp | CTGCCAGGAGGTCAGTTAGAGCCTCACCTGAGTTCTTaGCCGAAACATCCATTTTCTTTGTCCCTAACTCTT | + |
Preference number: 3 (lower is better) Translates to: LPGGQLEPHLSS*PKHPFSLSLTL Trigger: AAGAGTTAGGGACAAAGAAAATGGATGTTTCGGCCAAGAACTCAGGTGAGGCTCTAACTGACCTCCTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR GCA 72 bp | TGTTTGCTTAGTTTTCAGGTTCTCTGTGCGCATGCGTaGATGCTTGACTGTGTAAGAGTCTCTCTCTCTCTC | + |
Preference number: 3 (lower is better) Translates to: CLLSFQVLCAHA*MLDCVRVSLSL Trigger: GAGAGAGAGAGAGACTCTTACACAGTCAAGCATGCACGCATGCGCACAGAGAACCTGAAAACTAAGCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR CCA 72 bp | CCTCCACTGGAAACTGGAGGCTTTTCTATGATTAGATaGCTCTGCCACCAGATCCATAAGGTAGCCAAAGAT | + |
Preference number: 3 (lower is better) Translates to: PPLETGGFSMIR*LCHQIHKVAKD Trigger: ATCTTTGGCTACCTTATGGATCTGGTGGCAGAGCCATCTAATCATAGAAAAGCCTCCAGTTTCCAGTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR-3UTR CAA 90 bp | ACACACTGCTCAGTCACTTCTGAACTTTCCTTTTCCCTCTCCACATATAGTTTCAGTGTATGGGTGATTTaGCTTGAGTGTATTTATGTG | + |
Preference number: 3 (lower is better) Translates to: THCSVTSELSFSLSTYSFSVWVI*LECIYV Trigger: CACATAAATACACTCAAGCAAAATCACCCATACACT...GAAACTATATGTGGAGAGGGAAAAGGAAAGTTCAGAAGTGACTGAGCAGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR GCA 90 bp | ACTCCTGCCCCTCTCGCCACTACCTGGACCCTCCCCTCTGGTTTGAAGCTGAGGTGTTTGAGCTCCTCCTaGAGCAGGTCCGTCTGCCGG | + |
Preference number: 4 (lower is better) Translates to: TPAPLATTWTLPSGLKLRCLSSS*SRSVCR Trigger: CCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACA...CCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTAGTGGCGAGAGGGGCAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR TCA 90 bp | TGGACAGCCTATAGGAGGCACACATTCCTCGACACAAGGACCAGGCAGCAGGCCGTACGCCCAGCGCACTaGACAGTCCCCCAGGGAGTA | + |
Preference number: 4 (lower is better) Translates to: WTAYRRHTFLDTRTRQQAVRPAH*TVPQGV Trigger: TACTCCCTGGGGGACTGTTCAGTGCGCTGGGCGTAC...GGCCTGCTGCCTGGTCCTTGTGTCGAGGAATGTGTGCCTCCTATAGGCTGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR GCA 90 bp | GCCTCCTGGACAGCCTATAGGAGGCACACATTCCTCGACACAAGGACCAGGCAGGGTCCGTCTGCCGGTTaGCCAGCACGAAGGCAAGGA | + |
Preference number: 4 (lower is better) Translates to: ASWTAYRRHTFLDTRTRQGPSAG*PARRQG Trigger: TCCTTGCCTTCGTGCTGGGCAACCGGCAGACGGACC...CTGCCTGGTCCTTGTGTCGAGGAATGTGTGCCTCCTATAGGCTGTCCAGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CCA 90 bp | GCCTCCTGGACAGCCTATAGGAGGCACACATTCCTCGACACAAGGACCAGGCAGCGAAGTAGCCAGGCTTaGGAGTGCTCACGCTGTCGC | + |
Preference number: 4 (lower is better) Translates to: ASWTAYRRHTFLDTRTRQRSSQA*ECSRCR Trigger: GCGACAGCGTGAGCACTCCCAAGCCTGGCTACTTCG...CTGCCTGGTCCTTGTGTCGAGGAATGTGTGCCTCCTATAGGCTGTCCAGGAGGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR TCA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCGTACGCCCAGCGCACTaGACAGTCCCCCAGGGAGTA | + |
Preference number: 4 (lower is better) Translates to: GCWDLNSGPSEEQSGALTVRPAH*TVPQGV Trigger: TACTCCCTGGGGGACTGTTCAGTGCGCTGGGCGTAC...GGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR GCA 90 bp | CTCTCCAAGCACACACATGGCTGCCCTCCTCAATCCCTAGCGTTTCCTCTTCACAGCCAGGCTTGGGAGTaGTCACGCTGTCGCCTACCC | + |
Preference number: 4 (lower is better) Translates to: LSKHTHGCPPQSLAFPLHSQAWE*SRCRLP Trigger: GGGTAGGCGACAGCGTGAGCACTCCCAAGCCTGGCT...GTGAAGAGGAAACGCTAGGGATTGAGGAGGGCAGCCATGTGTGTGCTTGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR GCA 90 bp | TGCTCTCTTCTCAGGAATACCTCCTGTCCCACCCAAAAGCTAGCTCTGAGCCAGGGCCCGCTAGCCCGCTaGCCACGCAGTAGTGGAAGA | + |
Preference number: 4 (lower is better) Translates to: CSLLRNTSCPTQKLALSQGPLAR*PRSSGR Trigger: TCTTCCACTACTGCGTGGGCAGCGGGCTAGCGGGCC...CTGGCTCAGAGCTAGCTTTTGGGTGGGACAGGAGGTATTCCTGAGAAGAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR GCA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGGTCCGTCTGCCGGTTaGCCAGCACGAAGGCAAGGA | + |
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGPSEEQSGGPSAG*PARRQG Trigger: TCCTTGCCTTCGTGCTGGGCAACCGGCAGACGGACC...ACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR GCA 90 bp | CCTTCCTCTCTGTCATTAGCCCACCTCTATCTAACACAGCCTGGCCTGCTCGGTTGCAGCAGGTCCGTCTaGCGGTTGCCCAGCACGAAG | + |
Preference number: 4 (lower is better) Translates to: PSSLSLAHLYLTQPGLLGCSRSV*RLPSTK Trigger: CTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCA...ACCGAGCAGGCCAGGCTGTGTTAGATAGAGGTGGGCTAATGACAGAGAGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR GCA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCTGCAGCAGGTCCGTCTaGCGGTTGCCCAGCACGAAG | + |
Preference number: 4 (lower is better) Translates to: GCWDLNSGPSEEQSGALTCSRSV*RLPSTK Trigger: CTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCA...GGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR TCA 90 bp | CTGCAGGAGAAGAGAGATCTTCTCATCTGCCCTTTCCTAACACACGCACACACAAGAAGGCGGCCGCCTTaGAGGCGCTGGACGGGATGG | + |
Preference number: 4 (lower is better) Translates to: LQEKRDLLICPFLTHAHTRRRPP*RRWTGW Trigger: CCATCCCGTCCAGCGCCTTCAAGGCGGCCGCCTTCT...TGTGTGTGCGTGTGTTAGGAAAGGGCAGATGAGAAGATCTCTCTTCTCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR TCA 90 bp | TACCTGGACCCTCCCCTCTGGTTTGAAGCTGAGGATCTGACTTCCTGCTCCCTTCAGGGTCCCTGTGTGTaGGCAACAGGGCATGGTAGG | + |
Preference number: 4 (lower is better) Translates to: YLDPPLWFEAEDLTSCSLQGPCV*ATGHGR Trigger: CCTACCATGCCCTGTTGCTCACACACAGGGACCCTG...AAGGGAGCAGGAAGTCAGATCCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR GCA 90 bp | TCAGTCACCTCTGTCCCCTCACTTCACAGTGTGGGGCATCAGATGATGGGAACCAGGGCTGCCAGGAGCTaGATCCAGGCGCAGATCTTG | + |
Preference number: 4 (lower is better) Translates to: SVTSVPSLHSVGHQMMGTRAARS*IQAQIL Trigger: CAAGATCTGCGCCTGGATGCAGCTCCTGGCAGCCCT...GGTTCCCATCATCTGATGCCCCACACTGTGAAGTGAGGGGACAGAGGTGACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR GCA 90 bp | TGCTCTCTTCTCAGGAATACCTCCTGTCCCACCCAAAAGCTAGCTCTGAGCCAGAGGGCTGCCAGGAGCTaGATCCAGGCGCAGATCTTG | + |
Preference number: 4 (lower is better) Translates to: CSLLRNTSCPTQKLALSQRAARS*IQAQIL Trigger: CAAGATCTGCGCCTGGATGCAGCTCCTGGCAGCCCT...CTGGCTCAGAGCTAGCTTTTGGGTGGGACAGGAGGTATTCCTGAGAAGAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 72 bp | ACCAGGCAGCAGGCCGTGTCCTCGGAGACATTATGTTaGATGACGTTCGTCTGCCACCCCTCCACTGGAAAC | + |
Preference number: 4 (lower is better) Translates to: TRQQAVSSETLC*MTFVCHPSTGN Trigger: GTTTCCAGTGGAGGGGTGGCAGACGAACGTCATCAAACATAATGTCTCCGAGGACACGGCCTGCTGCCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 72 bp | CCCCGTCCTCCCAAGCGCCATCTGCAAGCTGCCATCTaGGCTCTTGCAGGCCCCAGAAGGATGTTAATATTC | + |
Preference number: 4 (lower is better) Translates to: PRPPKRHLQAAI*ALAGPRRMLIF Trigger: GAATATTAACATCCTTCTGGGGCCTGCAAGAGCCAAGATGGCAGCTTGCAGATGGCGCTTGGGAGGACGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 72 bp | ACAACACCAAGCTACCCTAACACACAGCACAGGTCCTaGGAGGACTGCCAGTCAGAGTCCTGGGATGGCTGG | + |
Preference number: 4 (lower is better) Translates to: TTPSYPNTQHRS*EDCQSESWDGW Trigger: CCAGCCATCCCAGGACTCTGACTGGCAGTCCTCCAAGGACCTGTGCTGTGTGTTAGGGTAGCTTGGTGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCCAGGGGACAAATTTTCCAGGGCGGTTGCCCTTTCCTaGCTCACAGCAGGCCTTGCC | + |
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCKPGDKFSRAVALS*LTAGLA Trigger: GGCAAGGCCTGCTGTGAGGCAGGAAAGGGCAACCGC...CCTGGAAAATTTGTCCCCTGGCTTACACACACACACACACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR GCA 90 bp | TCCACATATAGTTTCTCAGTCACCTCTGTCCCCTCACTTCACAGTGTGGGGCATTGTTTGAGCTCCTCCTaGAGCAGGTCCGTCTGCCGG | + |
Preference number: 4 (lower is better) Translates to: STYSFSVTSVPSLHSVGHCLSSS*SRSVCR Trigger: CCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACA...ATGCCCCACACTGTGAAGTGAGGGGACAGAGGTGACTGAGAAACTATATGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR CAA 72 bp | TCCGTGTGCAGCCAGTTCAAGATTTGGGTCTGGAGCTaGAACGCAGGAATGAGAGGGCAGCAGACGGGATAT | + |
Preference number: 4 (lower is better) Translates to: SVCSQFKIWVWS*NAGMRGQQTGY Trigger: ATATCCCGTCTGCTGCCCTCTCATTCCTGCGTTCAAGCTCCAGACCCAAATCTTGAACTGGCTGCACACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 72 bp | AAGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
Preference number: 4 (lower is better) Translates to: KDGCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR TCA 90 bp | ACTAGCCGTTCTTCCTCTCTGGCTGAGGCCAATGTAACACAGGGAAGTGAGACGCTTTGTTCTCCTGTTTaGGCTCCTCCTGCAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: TSRSSSLAEANVTQGSETLCSPV*APPAAG Trigger: ACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAG...CGTCTCACTTCCCTGTGTTACATTGGCCTCAGCCAGAGAGGAAGAACGGCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CCA 90 bp | CAGGAGAAGAGAGATCTTCTCATCTGCCCTTTCCTAACACACGCACACACACACAGTACTTCCCTGTCTTaGCCCCGCACATGTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: QEKRDLLICPFLTHAHTHSTSLS*PRTCPG Trigger: TCCGGGACATGTGCGGGGCCAAGACAGGGAAGTACT...GTGTGTGTGTGCGTGTGTTAGGAAAGGGCAGATGAGAAGATCTCTCTTCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 72 bp | CACCTCTATCTAACACAGCCTGGCCTGCTCGGTCCCTaGTACACACACAGTTCTCTCCAAAGGATCAGAGCT | + |
Preference number: 4 (lower is better) Translates to: HLYLTQPGLLGP*YTHSSLQRIRA Trigger: AGCTCTGATCCTTTGGAGAGAACTGTGTGTGTACAAGGGACCGAGCAGGCCAGGCTGTGTTAGATAGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR TCA 90 bp | TCCACATATAGTTTCTCAGTCACCTCTGTCCCCTCACTTCACAGTGTGGGGCATCTTTGTTCTCCTGTTTaGGCTCCTCCTGCAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: STYSFSVTSVPSLHSVGHLCSPV*APPAAG Trigger: ACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAG...ATGCCCCACACTGTGAAGTGAGGGGACAGAGGTGACTGAGAAACTATATGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR GCA 90 bp | TTTTCTTTGTCCCTAACTCTTCTAAGCCTTCAAGACCACATTTTGGTTCCCATTGACGAGGCACAGGGCTaGCAGGAGCTGCATCCAGGC | + |
Preference number: 4 (lower is better) Translates to: FSLSLTLLSLQDHILVPIDEAQG*QELHPG Trigger: GCCTGGATGCAGCTCCTGGCAGCCCTGTGCCTCGTC...AATGGGAACCAAAATGTGGTCTTGAAGGCTTAGAAGAGTTAGGGACAAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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3UTR CAA 72 bp | CAGAAAAGTATCAAAGACGCAAGACAGTCTCTGCCCTaGGCAGATGTCCAGGGTGTAGGAAGCATGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: QKSIKDARQSLP*ADVQGVGSMRR Trigger: CCTTCTCATGCTTCCTACACCCTGGACATCTGCCAAGGGCAGAGACTGTCTTGCGTCTTTGATACTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR GCA 90 bp | ACACACTGCTCAGTCACTTCTGAACTTTCCTTTTCCCTCTCCACATATAGTTTCCCTCACAGCAGGCCTTaGCCTCTGGTCCACACACTT | + |
Preference number: 4 (lower is better) Translates to: THCSVTSELSFSLSTYSFPHSRP*PLVHTL Trigger: AAGTGTGTGGACCAGAGGGCAAGGCCTGCTGTGAGG...GAAACTATATGTGGAGAGGGAAAAGGAAAGTTCAGAAGTGACTGAGCAGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR CCA 90 bp | CACACTGCTCAGTCACTTCTGAACTTTCCTTTTCCCTCTCCACATATAGTTTCTCGCACATGTCCCGGATaGTCTCAGCATCCCAGCCAT | + |
Preference number: 4 (lower is better) Translates to: HTAQSLLNFPFPSPHIVSRTCPG*SQHPSH Trigger: ATGGCTGGGATGCTGAGACCATCCGGGACATGTGCG...AGAAACTATATGTGGAGAGGGAAAAGGAAAGTTCAGAAGTGACTGAGCAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR CCA 90 bp | ACACACTGCTCAGTCACTTCTGAACTTTCCTTTTCCCTCTCCACATATAGTTTCTCAGCCCAGGGCCTCTaGAAGAGTAGCCAGTGCTCT | + |
Preference number: 4 (lower is better) Translates to: THCSVTSELSFSLSTYSFSAQGL*KSSQCS Trigger: AGAGCACTGGCTACTCTTCCAGAGGCCCTGGGCTGA...GAAACTATATGTGGAGAGGGAAAAGGAAAGTTCAGAAGTGACTGAGCAGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR CAA 72 bp | CAGAAGGATGTTAATATTCCCCACATCCTCAGGCCCTaGGAACAGCTTTCCTCCATAGCTCTGGTCCTTAGA | + |
Preference number: 4 (lower is better) Translates to: QKDVNIPHILRP*EQLSSIALVLR Trigger: TCTAAGGACCAGAGCTATGGAGGAAAGCTGTTCCAAGGGCCTGAGGATGTGGGGAATATTAACATCCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CCA 90 bp | TTTTCTTTGTCCCTAACTCTTCTAAGCCTTCAAGACCACATTTTGGTTCCCATTGCTCATGGTAGAGCTTaGAGGCTTCCTGCGAGGGCA | + |
Preference number: 4 (lower is better) Translates to: FSLSLTLLSLQDHILVPIAHGRA*RLPARA Trigger: TGCCCTCGCAGGAAGCCTCCAAGCTCTACCATGAGC...AATGGGAACCAAAATGTGGTCTTGAAGGCTTAGAAGAGTTAGGGACAAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CCA 90 bp | TTTTCTTTGTCCCTAACTCTTCTAAGCCTTCAAGACCACATTTTGGTTCCCATTCGCACATGTCCCGGATaGTCTCAGCATCCCAGCCAT | + |
Preference number: 4 (lower is better) Translates to: FSLSLTLLSLQDHILVPIRTCPG*SQHPSH Trigger: ATGGCTGGGATGCTGAGACCATCCGGGACATGTGCG...AATGGGAACCAAAATGTGGTCTTGAAGGCTTAGAAGAGTTAGGGACAAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR GCA 90 bp | GAACACACTGCTCAGTCACTTCTGAACTTTCCTTTTCCCTCTCCACATATAGTTCCTGTGTGTAATTTTTaGTTCACTCCTTTTATTGCA | + |
Preference number: 4 (lower is better) Translates to: EHTAQSLLNFPFPSPHIVPVCNF*FTPFIA Trigger: TGCAATAAAAGGAGTGAAGCAAAAATTACACACAGG...AACTATATGTGGAGAGGGAAAAGGAAAGTTCAGAAGTGACTGAGCAGTGTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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3UTR CAA 72 bp | AAATTTTTATTTAAGCCATGCATCCCTTATTTCTGCTaGGCTTGGGACTTAATGAACACACTGCTCAGTCAC | + |
Preference number: 4 (lower is better) Translates to: KFLFKPCIPYFC*AWDLMNTLLSH Trigger: GTGACTGAGCAGTGTGTTCATTAAGTCCCAAGCCAAGCAGAAATAAGGGATGCATGGCTTAAATAAAAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CCA 90 bp | ACGCCCAGCGCACTGAACAGTCCCCCAGGGAGTACTTCCCTGTCTTaGCCCCGCACATGTCCCGGATGGTCTCAGCATCCCAGCCATCAG | + |
Preference number: 5 (lower is better) Translates to: TPSALNSPPGSTSLS*PRTCPGWSQHPSHQ Trigger: CTGATGGCTGGGATGCTGAGACCATCCGGGACATGTGCGGGGCCAAGACAGGGAAGTACTCCCTGGGGGACTGTTCAGTGCGCTGGGCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS-3UTR CAA 90 bp | CTGGGGATCCCCAGGGACCTCCAGCTAGTCTACACAGGAGAGAAGGAAACCGAGAAGAAGGCGGCCGCCTaGAAGGCGCTGGACGGGATG | + |
Preference number: 5 (lower is better) Translates to: LGIPRDLQLVYTGEKETEKKAAA*KALDGM Trigger: CATCCCGTCCAGCGCCTTCAAGGCGGCCGCCTTCTT...CTCGGTTTCCTTCTCTCCTGTGTAGACTAGCTGGAGGTCCCTGGGGATCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS TCA 90 bp | CGCGTTGAGGATGCCGATGATGGCCAGAATGTACGCCCAGCGCACTaGACAGTCCCCCAGGGAGTACTTCCCTGTCTTGGCCCCGCACAT | + |
Preference number: 5 (lower is better) Translates to: RVEDADDGQNVRPAH*TVPQGVLPCLGPAH Trigger: ATGTGCGGGGCCAAGACAGGGAAGTACTCCCTGGGGGACTGTTCAGTGCGCTGGGCGTACATTCTGGCCATCATCGGCATCCTCAACGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS TCA 90 bp | CAGGCCTTGCCCTCTGGTCCACACACTTGCCTTTGTTCTCCTGTTTaGGCTCCTCCTGCAGCAGGTCCGTCTGCCGGTTGCCCAGCACGA | + |
Preference number: 5 (lower is better) Translates to: QALPSGPHTCLCSPV*APPAAGPSAGCPAR Trigger: TCGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGGCAAGTGTGTGGACCAGAGGGCAAGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS GCA 90 bp | TTGCCTTTGTTCTCCTGTTTGAGCTCCTCCTGCAGCAGGTCCGTCTaGCGGTTGCCCAGCACGAAGGCAAGGAAGGACAGGATGAGCGCG | + |
Preference number: 5 (lower is better) Translates to: LPLFSCLSSSCSRSV*RLPSTKARKDRMSA Trigger: CGCGCTCATCCTGTCCTTCCTTGCCTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS GCA 90 bp | CTCTGGTCCACACACTTGCCTTTGTTCTCCTGTTTGAGCTCCTCCTaGAGCAGGTCCGTCTGCCGGTTGCCCAGCACGAAGGCAAGGAAG | + |
Preference number: 5 (lower is better) Translates to: LWSTHLPLFSCLSSS*SRSVCRLPSTKARK Trigger: CTTCCTTGCCTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGGCAAGTGTGTGGACCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CCA 90 bp | GCATCTGCGGTTGCCCTTTCCTGCCTCACAGCAGGCCTTGCCCTCTaGTCCACACACTTGCCTTTGTTCTCCTGTTTGAGCTCCTCCTGC | + |
Preference number: 5 (lower is better) Translates to: ASAVALSCLTAGLAL*STHLPLFSCLSSSC Trigger: GCAGGAGGAGCTCAAACAGGAGAACAAAGGCAAGTGTGTGGACCAGAGGGCAAGGCCTGCTGTGAGGCAGGAAAGGGCAACCGCAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR CAA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCGAGTACTTCCCTGTCTaGGCCCCGCACATGTCCCGG | + |
Preference number: 5 (lower is better) Translates to: GCWDLNSGPSEEQSGALTEYFPV*APHMSR Trigger: CCGGGACATGTGCGGGGCCAAGACAGGGAAGTACTC...GGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS GCA 90 bp | AAATCTTTGTTCTCCTGTTTGAGCTCCTCCTGCAGCAGGTCCGTCTaGCGGTTGCCCAGCACGAAGGCAAGGAAGGACAGGATGAGCGCG | + |
Preference number: 5 (lower is better) Translates to: KSLFSCLSSSCSRSV*RLPSTKARKDRMSA Trigger: CGCGCTCATCCTGTCCTTCCTTGCCTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS GCA 90 bp | ACTGTAGTGCCCACGAAATCTTTGTTCTCCTGTTTGAGCTCCTCCTaGAGCAGGTCCGTCTGCCGGTTGCCCAGCACGAAGGCAAGGAAG | + |
Preference number: 5 (lower is better) Translates to: TVVPTKSLFSCLSSS*SRSVCRLPSTKARK Trigger: CTTCCTTGCCTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGATTTCGTGGGCACTACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CAA 90 bp | CAGGAGAAGAGAGATCTTCTCATCTGCCCTTTCCTAACACACGCACACACACACGAGTACTTCCCTGTCTaGGCCCCGCACATGTCCCGG | + |
Preference number: 5 (lower is better) Translates to: QEKRDLLICPFLTHAHTHEYFPV*APHMSR Trigger: CCGGGACATGTGCGGGGCCAAGACAGGGAAGTACTC...GTGTGTGTGTGCGTGTGTTAGGAAAGGGCAGATGAGAAGATCTCTCTTCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CAA 90 bp | CTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCCAGGGGACAAATGCCTCACAGCAGGCCTaGCCCTCTGGTCCACACACT | + |
Preference number: 5 (lower is better) Translates to: LSVCVCVCVCVCVSQGTNASQQA*PSGPHT Trigger: AGTGTGTGGACCAGAGGGCAAGGCCTGCTGTGAGGC...ATTTGTCCCCTGGCTTACACACACACACACACACACACACACACACACAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR CAA 90 bp | CTCTCCAAGCACACACATGGCTGCCCTCCTCAATCCCTAGCGTTTCCTCTTCACATGAAGACCACCACGTaGATGATGGCGAAGCAGATG | + |
Preference number: 5 (lower is better) Translates to: LSKHTHGCPPQSLAFPLHMKTTT*MMAKQM Trigger: CATCTGCTTCGCCATCATCAACGTGGTGGTCTTCAT...GTGAAGAGGAAACGCTAGGGATTGAGGAGGGCAGCCATGTGTGTGCTTGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CAA 90 bp | CCCCTCCATTTCCCACCTCCCAGGTTTCTTCATCTGCTGCCCATCCATGGAAAATCTTTGTTCTCCTGTTaGAGCTCCTCCTGCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: PLHFPPPRFLHLLPIHGKSLFSC*SSSCSR Trigger: CCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGA...TTTTCCATGGATGGGCAGCAGATGAAGAAACCTGGGAGGTGGGAAATGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CAA 90 bp | TCTCCACATATAGTTTCTCAGTCACCTCTGTCCCCTCACTTCACAGTGTGGGGCCCTTTGTTCTCCTGTTaGAGCTCCTCCTGCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: SPHIVSQSPLSPHFTVWGPLFSC*SSSCSR Trigger: CCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGG...GCCCCACACTGTGAAGTGAGGGGACAGAGGTGACTGAGAAACTATATGTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR CAA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCTCCACACACTTGCCTTaGTTCTCCTGTTTGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: GCWDLNSGPSEEQSGALTSTHLP*FSCLSS Trigger: GGAGCTCAAACAGGAGAACAAAGGCAAGTGTGTGGA...GGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS-3UTR CAA 90 bp | TATAACTGCTTTCTCCTCTCCCCTCTCTGTCAAGAGCAAAGAAATCCGCTAACAGACAGGATGAGCGCGTaGAGGATGCCGATGATGGCC | + |
Preference number: 5 (lower is better) Translates to: YNCFLLSPLCQEQRNPLTDRMSA*RMPMMA Trigger: GGCCATCATCGGCATCCTCAACGCGCTCATCCTGTC...TGTTAGCGGATTTCTTTGCTCTTGACAGAGAGGGGAGAGGAGAAAGCAGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGCCAGGGGACAAATTTTCCAGGTTATTGCATCTGCGGTaGCCCTTTCCTGCCTCACAG | + |
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCKPGDKFSRLLHLR*PFPASQ Trigger: CTGTGAGGCAGGAAAGGGCAACCGCAGATGCAATAA...CCTGGAAAATTTGTCCCCTGGCTTACACACACACACACACACACACACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS GCA 90 bp | AGAGTAGCCAGTGCTCTGAATCGCCAGCTCCCTGTGTGTAATTTTTaGTTCACTCCTTTTATTGCATCTGCGGTTGCCCTTTCCTGCCTC | + |
Preference number: 5 (lower is better) Translates to: RVASALNRQLPVCNF*FTPFIASAVALSCL Trigger: GAGGCAGGAAAGGGCAACCGCAGATGCAATAAAAGGAGTGAAGCAAAAATTACACACAGGGAGCTGGCGATTCAGAGCACTGGCTACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CAA 90 bp | TACGCCCAGCGCACTGAACAGTCCCCCAGGGAGTACTTCCCTGTCTaGGCCCCGCACATGTCCCGGATGGTCTCAGCATCCCAGCCATCA | + |
Preference number: 6 (lower is better) Translates to: YAQRTEQSPREYFPV*APHMSRMVSASQPS Trigger: TGATGGCTGGGATGCTGAGACCATCCGGGACATGTGCGGGGCCAAGACAGGGAAGTACTCCCTGGGGGACTGTTCAGTGCGCTGGGCGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS CAA 90 bp | GCAGGCCTTGCCCTCTGGTCCACACACTTGCCTTTGTTCTCCTGTTaGAGCTCCTCCTGCAGCAGGTCCGTCTGCCGGTTGCCCAGCACG | + |
Preference number: 6 (lower is better) Translates to: AGLALWSTHLPLFSC*SSSCSRSVCRLPST Trigger: CGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGGCAAGTGTGTGGACCAGAGGGCAAGGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CCA 72 bp | GCACTGAACAGTCCCCCAGGGAGTACTTCCCTGTCTTaGCCCCGCACATGTCCCGGATGGTCTCAGCATCCC | + |
Preference number: 6 (lower is better) Translates to: ALNSPPGSTSLS*PRTCPGWSQHP Trigger: GGGATGCTGAGACCATCCGGGACATGTGCGGGGCCAAGACAGGGAAGTACTCCCTGGGGGACTGTTCAGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS GCA 72 bp | TTCTCCTGTTTGAGCTCCTCCTGCAGCAGGTCCGTCTaGCGGTTGCCCAGCACGAAGGCAAGGAAGGACAGG | + |
Preference number: 6 (lower is better) Translates to: FSCLSSSCSRSV*RLPSTKARKDR Trigger: CCTGTCCTTCCTTGCCTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS CAA 72 bp | AGCACCATGGAAAGCAACACGAAGAAGGCGGCCGCCTaGAAGGCGCTGGACGGGATGGTGCTGAAGTCGGTG | + |
Preference number: 6 (lower is better) Translates to: STMESNTKKAAA*KALDGMVLKSV Trigger: CACCGACTTCAGCACCATCCCGTCCAGCGCCTTCAAGGCGGCCGCCTTCTTCGTGTTGCTTTCCATGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS CAA 90 bp | CCGAGAATCAGCACCATGGAAAGCAACACGAAGAAGGCGGCCGCCTaGAAGGCGCTGGACGGGATGGTGCTGAAGTCGGTGAAAGAGCCC | + |
Preference number: 6 (lower is better) Translates to: PRISTMESNTKKAAA*KALDGMVLKSVKEP Trigger: GGGCTCTTTCACCGACTTCAGCACCATCCCGTCCAGCGCCTTCAAGGCGGCCGCCTTCTTCGTGTTGCTTTCCATGGTGCTGATTCTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS CAA 90 bp | TGCCGGTTGCCCAGCACGAAGGCAAGGAAGGACAGGATGAGCGCGTaGAGGATGCCGATGATGGCCAGAATGTACGCCCAGCGCACTGAA | + |
Preference number: 6 (lower is better) Translates to: CRLPSTKARKDRMSA*RMPMMARMYAQRTE Trigger: TTCAGTGCGCTGGGCGTACATTCTGGCCATCATCGGCATCCTCAACGCGCTCATCCTGTCCTTCCTTGCCTTCGTGCTGGGCAACCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS TCA 72 bp | GATGCCGATGATGGCCAGAATGTACGCCCAGCGCACTaGACAGTCCCCCAGGGAGTACTTCCCTGTCTTGGC | + |
Preference number: 6 (lower is better) Translates to: DADDGQNVRPAH*TVPQGVLPCLG Trigger: GCCAAGACAGGGAAGTACTCCCTGGGGGACTGTTCAGTGCGCTGGGCGTACATTCTGGCCATCATCGGCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS TCA 72 bp | CCCTCTGGTCCACACACTTGCCTTTGTTCTCCTGTTTaGGCTCCTCCTGCAGCAGGTCCGTCTGCCGGTTGC | + |
Preference number: 6 (lower is better) Translates to: PSGPHTCLCSPV*APPAAGPSAGC Trigger: GCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGGCAAGTGTGTGGACCAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CAA 72 bp | CCCAGCACGAAGGCAAGGAAGGACAGGATGAGCGCGTaGAGGATGCCGATGATGGCCAGAATGTACGCCCAG | + |
Preference number: 6 (lower is better) Translates to: PSTKARKDRMSA*RMPMMARMYAQ Trigger: CTGGGCGTACATTCTGGCCATCATCGGCATCCTCAACGCGCTCATCCTGTCCTTCCTTGCCTTCGTGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS CAA 72 bp | GCCCTCTGGTCCACACACTTGCCTTTGTTCTCCTGTTaGAGCTCCTCCTGCAGCAGGTCCGTCTGCCGGTTG | + |
Preference number: 6 (lower is better) Translates to: ALWSTHLPLFSC*SSSCSRSVCRL Trigger: CAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGGCAAGTGTGTGGACCAGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CAA 90 bp | CCTCCTGGCCGCAGCACGGAACTTACTGTAGTGCCCACGAAATCTTaGTTCTCCTGTTTGAGCTCCTCCTGCAGCAGGTCCGTCTGCCGG | + |
Preference number: 6 (lower is better) Translates to: PPGRSTELTVVPTKS*FSCLSSSCSRSVCR Trigger: CCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGATTTCGTGGGCACTACAGTAAGTTCCGTGCTGCGGCCAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS GCA 72 bp | CCCACGAAATCTTTGTTCTCCTGTTTGAGCTCCTCCTaGAGCAGGTCCGTCTGCCGGTTGCCCAGCACGAAG | + |
Preference number: 6 (lower is better) Translates to: PTKSLFSCLSSS*SRSVCRLPSTK Trigger: CTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGATTTCGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS GCA 72 bp | ACACACTTGCCTTTGTTCTCCTGTTTGAGCTCCTCCTaGAGCAGGTCCGTCTGCCGGTTGCCCAGCACGAAG | + |
Preference number: 6 (lower is better) Translates to: THLPLFSCLSSS*SRSVCRLPSTK Trigger: CTTCGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGGCAAGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS GCA 72 bp | ATCTGCGGTTGCCCTTTCCTGCCTCACAGCAGGCCTTaGCCTCTGGTCCACACACTTGCCTTTGTTCTCCTG | + |
Preference number: 6 (lower is better) Translates to: ICGCPFLPHSRP*PLVHTLAFVLL Trigger: CAGGAGAACAAAGGCAAGTGTGTGGACCAGAGGGCAAGGCCTGCTGTGAGGCAGGAAAGGGCAACCGCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CAA 72 bp | ACAGCAGGCCTTGCCCTCTGGTCCACACACTTGCCTTaGTTCTCCTGTTTGAGCTCCTCCTGCAGCAGGTCC | + |
Preference number: 6 (lower is better) Translates to: TAGLALWSTHLP*FSCLSSSCSRS Trigger: GGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGGCAAGTGTGTGGACCAGAGGGCAAGGCCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CAA 72 bp | CATCTGCGGTTGCCCTTTCCTGCCTCACAGCAGGCCTaGCCCTCTGGTCCACACACTTGCCTTTGTTCTCCT | + |
Preference number: 6 (lower is better) Translates to: HLRLPFPASQQA*PSGPHTCLCSP Trigger: AGGAGAACAAAGGCAAGTGTGTGGACCAGAGGGCAAGGCCTGCTGTGAGGCAGGAAAGGGCAACCGCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CAA 90 bp | AGCACGGAACTTACTGTAGTGCCCACGAAATCTTTGTTCTCCTGTTaGAGCTCCTCCTGCAGCAGGTCCGTCTGCCGGTTGCCCAGCACG | + |
Preference number: 6 (lower is better) Translates to: STELTVVPTKSLFSC*SSSCSRSVCRLPST Trigger: CGTGCTGGGCAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGATTTCGTGGGCACTACAGTAAGTTCCGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS CCA 72 bp | GTTGCCCTTTCCTGCCTCACAGCAGGCCTTGCCCTCTaGTCCACACACTTGCCTTTGTTCTCCTGTTTGAGC | + |
Preference number: 6 (lower is better) Translates to: VALSCLTAGLAL*STHLPLFSCLS Trigger: GCTCAAACAGGAGAACAAAGGCAAGTGTGTGGACCAGAGGGCAAGGCCTGCTGTGAGGCAGGAAAGGGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS GCA 72 bp | TTCACTCCTTTTATTGCATCTGCGGTTGCCCTTTCCTaGCTCACAGCAGGCCTTGCCCTCTGGTCCACACAC | + |
Preference number: 6 (lower is better) Translates to: FTPFIASAVALS*LTAGLALWSTH Trigger: GTGTGTGGACCAGAGGGCAAGGCCTGCTGTGAGGCAGGAAAGGGCAACCGCAGATGCAATAAAAGGAGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS CCA 72 bp | AGTACTTCCCTGTCTTGGCCCCGCACATGTCCCGGATaGTCTCAGCATCCCAGCCATCAGGAAAGATCATAC | + |
Preference number: 6 (lower is better) Translates to: STSLSWPRTCPG*SQHPSHQERSY Trigger: GTATGATCTTTCCTGATGGCTGGGATGCTGAGACCATCCGGGACATGTGCGGGGCCAAGACAGGGAAGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162280.2 ENSMUST00000203665.2 |
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CDS CAA 72 bp | CTTACTGTAGTGCCCACGAAATCTTTGTTCTCCTGTTaGAGCTCCTCCTGCAGCAGGTCCGTCTGCCGGTTG | + |
Preference number: 6 (lower is better) Translates to: LTVVPTKSLFSC*SSSCSRSVCRL Trigger: CAACCGGCAGACGGACCTGCTGCAGGAGGAGCTCAAACAGGAGAACAAAGATTTCGTGGGCACTACAGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162280.2 |
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CDS CAA 72 bp | AGCTCCCTGTGTGTAATTTTTGCTTCACTCCTTTTATaGCATCTGCGGTTGCCCTTTCCTGCCTCACAGCAG | + |
Preference number: 6 (lower is better) Translates to: SSLCVIFASLLL*HLRLPFPASQQ Trigger: CTGCTGTGAGGCAGGAAAGGGCAACCGCAGATGCAATAAAAGGAGTGAAGCAAAAATTACACACAGGGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |
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CDS GCA 72 bp | AGTGCTCTGAATCGCCAGCTCCCTGTGTGTAATTTTTaGTTCACTCCTTTTATTGCATCTGCGGTTGCCCTT | + |
Preference number: 6 (lower is better) Translates to: SALNRQLPVCNF*FTPFIASAVAL Trigger: AAGGGCAACCGCAGATGCAATAAAAGGAGTGAAGCAAAAATTACACACAGGGAGCTGGCGATTCAGAGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203665.2 |