Pregenerated sensors for LHB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000100916, ENSMUSG00000118462Ensembl transcript IDs: ENSMUST00000072453.8, ENSMUST00000238437.2, ENSMUST00000238591.2, ENSMUST00000238638.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACTCATTCTCTGCGGCCAGAGTTGCGTTGACAGGCCGGCACAGTaGCCGAAGGGGGCCCCTGGAGGCCCACACCACACTTGGGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: ELILCGQSCVDRPAQ*PKGAPGGPHHTWAQ Trigger: CTGAGCCCAAGTGTGGTGTGGGCCTCCAGGGGCCCCCTTCGGCCACTGTGCCGGCCTGTCAACGCAACTCTGGCCGCAGAGAATGAGTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 90 bp | AGGGAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTaGCTGAGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCAT | + |
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Preference number: 1 (lower is better) Translates to: READRCEAQLPVGAH*LRHRRQSSRQYSDH Trigger: ATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| 3UTR CCA 90 bp | ACAAGGTCAGGGAAGCCAGGGACTAGCTCCAGTGTCCCAGTGAATTaGCCTCACACTCGGCCCAGGTGTCAGGGCTTAGCTGACATTGGA | + |
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Preference number: 1 (lower is better) Translates to: TRSGKPGTSSSVPVN*PHTRPRCQGLADIG Trigger: TCCAATGTCAGCTAAGCCCTGACACCTGGGCCGAGTGTGAGGCCAATTCACTGGGACACTGGAGCTAGTCCCTGGCTTCCCTGACCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 90 bp | CTCCTCCAACCCCCAGGTCACAAGGCTGTCCATCTATGGGTTTGGTaGGATTGGGAAGTACCCTGGGCCCTACCATCTTACCTGGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: LLQPPGHKAVHLWVW*DWEVPWALPSYLEP Trigger: AGGCTCCAGGTAAGATGGTAGGGCCCAGGGTACTTCCCAATCCCACCAAACCCATAGATGGACAGCCTTGTGACCTGGGGGTTGGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 90 bp | TCCCTCCTCCAACCCCCAGGTCACAAGGCTGTCCATCTATGGGTTTaGTGGGATTGGGAAGTACCCTGGGCCCTACCATCTTACCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: SLLQPPGHKAVHLWV*WDWEVPWALPSYLE Trigger: CTCCAGGTAAGATGGTAGGGCCCAGGGTACTTCCCAATCCCACCAAACCCATAGATGGACAGCCTTGTGACCTGGGGGTTGGAGGAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 90 bp | CTCCTCTCCCTCCTCCAACCCCCAGGTCACAAGGCTGTCCATCTATaGGTTTGGTGGGATTGGGAAGTACCCTGGGCCCTACCATCTTAC | + |
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Preference number: 1 (lower is better) Translates to: LLSLLQPPGHKAVHL*VWWDWEVPWALPSY Trigger: GTAAGATGGTAGGGCCCAGGGTACTTCCCAATCCCACCAAACCCATAGATGGACAGCCTTGTGACCTGGGGGTTGGAGGAGGGAGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR TCA 90 bp | CCTTCAAGACCCATCACCAGCCATGAAATCTGTTTATCTCCTGTTTaGAGTCCACCAGCTAGGAGACCCCCTCCTCTCCCTCCTCCAACC | + |
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Preference number: 1 (lower is better) Translates to: PSRPITSHEICLSPV*SPPARRPPPLPPPT Trigger: GGTTGGAGGAGGGAGAGGAGGGGGTCTCCTAGCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGGGTCTTGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR CCA 90 bp | CACGGGAAACAAGGTAAAGGGGAGGCCACTGCAGGCTGCTCGCTGAACCCCCAGCCGGTAGGTGCACACTaGCTGAGGCACAGGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: HGKQGKGEATAGCSLNPQPVGAH*LRHRRQ Trigger: TTGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGG...CTGGGGGTTCAGCGAGCAGCCTGCAGTGGCCTCCCCTTTACCTTGTTTCCCGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR CCA 90 bp | GCCGAAGGGGGCCCCTGGAGGCCCACACCACACTTGGGCTCAGCAGCAGCCACACCCTACCATCTTACCTaGAGCCTCTCCATTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: AEGGPWRPTPHLGSAAATPYHLT*SLSILD Trigger: ATCAAGAATGGAGAGGCTCCAGGTAAGATGGTAGGG...TGTGGCTGCTGCTGAGCCCAAGTGTGGTGTGGGCCTCCAGGGGCCCCCTTCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGAGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAATGATGGAGTTTGCGTaGTGGGTGGGCTTCACCGGC | + |
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Preference number: 2 (lower is better) Translates to: WLRHRRQSSRQYSDHARTMMEFA*WVGFTG Trigger: GCCGGTGAAGCCCACCCACCACGCAAACTCCATCAT...TGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCTCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCGGCAGGGCCCACAGCGGCAGCTGAGGGCTACAGGAAAGGAGACTATGGGCATCTATGGGTTTGGTaGGATTGGGAAGTACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EPAGPTAAAEGYRKGDYGHLWVW*DWEVPW Trigger: CCAGGGTACTTCCCAATCCCACCAAACCCATAGATG...CCCATAGTCTCCTTTCCTGTAGCCCTCAGCTGCCGCTGTGGGCCCTGCCGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCGGCAGGGCCCACAGCGGCAGCTGAGGGCTACAGGAAAGGAGACTATGGGGAAGGTGATGCAGACTaGGCAGAACTCATTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: EPAGPTAAAEGYRKGDYGEGDAD*AELILC Trigger: GCAGAGAATGAGTTCTGCCCAGTCTGCATCACCTTC...CCCATAGTCTCCTTTCCTGTAGCCCTCAGCTGCCGCTGTGGGCCCTGCCGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTTGGGTAACCTAGACACTAATCTCTTTGGGGGCGAGACACAGACAAGGGCAGCTCCCGGTAGGTaGACACTGGCTGAGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: TGLGNLDTNLFGGETQTRAAPGR*TLAEAQ Trigger: CTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGC...CCTTGTCTGTGTCTCGCCCCCAAAGAGATTAGTGTCTAGGTTACCCAAGCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCACCAGCCATGAAATCTGTTTATCTCCTGTTTGAAGTCCACCAGCTAGGAGGAGGGAGGGAGGGATaGTTAGAACACCTGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PSPAMKSVYLLFEVHQLGGGREG*LEHLLV Trigger: CACCAGCAGGTGTTCTAATCATCCCTCCCTCCCTCC...TCCTAGCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR CCA 90 bp | GACCCATCACCAGCCATGAAATCTGTTTATCTCCTGTTTGAAGTCCACCAGCTATGGGTTTGGTGGGATTaGGAAGTACCCTGGGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: DPSPAMKSVYLLFEVHQLWVWWD*EVPWAL Trigger: TAGGGCCCAGGGTACTTCCCAATCCCACCAAACCCA...TAGCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR TCA 90 bp | GACCCATCACCAGCCATGAAATCTGTTTATCTCCTGTTTGAAGTCCACCAGCTAGAGCCTCTCCATTCTTaGTACCTTCCCTACCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: DPSPAMKSVYLLFEVHQLEPLHS*YLPYLG Trigger: CCCAAGGTAGGGAAGGTATCAAGAATGGAGAGGCTC...TAGCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCACCAGCCATGAAATCTGTTTATCTCCTGTTTGAAGTCCACCAGCTAGGAAGCTATAAAACTTCTTaGTCAGTAAATTGCGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PSPAMKSVYLLFEVHQLGSYKTS*SVNCAW Trigger: CCAGGCGCAATTTACTGATCAAGAAGTTTTATAGCT...TCCTAGCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR TCA 72 bp | GGTCAGGGAAGCCAGGGACTAGCTCCAGTGTCCCAGTaGATTGGCCTCACACTCGGCCCAGGTGTCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: GQGSQGLAPVSQ*IGLTLGPGVRA Trigger: AGCCCTGACACCTGGGCCGAGTGTGAGGCCAATTCACTGGGACACTGGAGCTAGTCCCTGGCTTCCCTGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 72 bp | GGGAAGCCAGGGACTAGCTCCAGTGTCCCAGTGAATTaGCCTCACACTCGGCCCAGGTGTCAGGGCTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: GKPGTSSSVPVN*PHTRPRCQGLA Trigger: AGCTAAGCCCTGACACCTGGGCCGAGTGTGAGGCCAATTCACTGGGACACTGGAGCTAGTCCCTGGCTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCCGGCAGGGCCCACAGCGGCAGCTGAGGGCTACAGGAAAGGAGACTATGGGTGTCCATCTATGGGTTaGGTGGGATTGGGAAGTACC | + |
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Preference number: 3 (lower is better) Translates to: EPAGPTAAAEGYRKGDYGCPSMG*VGLGST Trigger: GGTACTTCCCAATCCCACCAAACCCATAGATGGACA...CCCATAGTCTCCTTTCCTGTAGCCCTCAGCTGCCGCTGTGGGCCCTGCCGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR GCA 72 bp | GGTGAAGGTGATGCAGACTGGGCAGAACTCATTCTCTaGGGCCAGAGTTGCGTTGACAGGCCGGCACAGTGG | + |
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Preference number: 3 (lower is better) Translates to: GEGDADWAELIL*GQSCVDRPAQW Trigger: CCACTGTGCCGGCCTGTCAACGCAACTCTGGCCGCAGAGAATGAGTTCTGCCCAGTCTGCATCACCTTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 72 bp | CTCCTCCAACCCCCAGGTCACAAGGCTGTCCATCTATaGGTTTGGTGGGATTGGGAAGTACCCTGGGCCCTA | + |
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Preference number: 3 (lower is better) Translates to: LLQPPGHKAVHL*VWWDWEVPWAL Trigger: TAGGGCCCAGGGTACTTCCCAATCCCACCAAACCCATAGATGGACAGCCTTGTGACCTGGGGGTTGGAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 72 bp | CCCCCAGGTCACAAGGCTGTCCATCTATGGGTTTGGTaGGATTGGGAAGTACCCTGGGCCCTACCATCTTAC | + |
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Preference number: 3 (lower is better) Translates to: PPGHKAVHLWVW*DWEVPWALPSY Trigger: GTAAGATGGTAGGGCCCAGGGTACTTCCCAATCCCACCAAACCCATAGATGGACAGCCTTGTGACCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 72 bp | CAACCCCCAGGTCACAAGGCTGTCCATCTATGGGTTTaGTGGGATTGGGAAGTACCCTGGGCCCTACCATCT | + |
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Preference number: 3 (lower is better) Translates to: QPPGHKAVHLWV*WDWEVPWALPS Trigger: AGATGGTAGGGCCCAGGGTACTTCCCAATCCCACCAAACCCATAGATGGACAGCCTTGTGACCTGGGGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 72 bp | GGTCACAAGGCTGTCCATCTATGGGTTTGGTGGGATTaGGAAGTACCCTGGGCCCTACCATCTTACCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GHKAVHLWVWWD*EVPWALPSYLE Trigger: CTCCAGGTAAGATGGTAGGGCCCAGGGTACTTCCCAATCCCACCAAACCCATAGATGGACAGCCTTGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CCA 72 bp | GCTGGAGTAAACGTCCATCAGACCCACTCTGATGGTTaGGTACAACTAAATAGGAGGGCACAGCTTCAACCT | + |
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Preference number: 3 (lower is better) Translates to: AGVNVHQTHSDG*VQLNRRAQLQP Trigger: AGGTTGAAGCTGTGCCCTCCTATTTAGTTGTACCCAACCATCAGAGTGGGTCTGATGGACGTTTACTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR TCA 72 bp | ATACAGAAACTGTCCTTCAAGACCCATCACCAGCCATaGAATCTGTTTATCTCCTGTTTGAAGTCCACCAGC | + |
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Preference number: 3 (lower is better) Translates to: IQKLSFKTHHQP*NLFISCLKSTS Trigger: GCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGGGTCTTGAAGGACAGTTTCTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCAGGTGGGATCCAGTGGTaGGCAACCCCGCTGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GGGQMRSAAPGRCTLAEAGGIQW*ATPLLV Trigger: CACCAGCAGCGGGGTTGCCCACCACTGGATCCCACC...TGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCAGAAGGTCCCCCGCGATaGTGGTCAGCGAGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGGQMRSAAPGRCTLAEAEGPPR*WSASSG Trigger: CCCAGAGCTCGCTGACCACCATCGCGGGGGACCTTC...TGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACGAAGGTCCCCCGCGATaGTGGTCAGCGAGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EADRCEAQLPVGAHWLRHEGPPR*WSASSG Trigger: CCCAGAGCTCGCTGACCACCATCGCGGGGGACCTTC...GTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR TCA 90 bp | GGAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCATCTTCGTCCAGGGGATaGGGGCCTGAGAAGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GGGQMRSAAPGRCTLAEASSSRG*GPEKVP Trigger: GGGGACCTTCTCAGGCCCTCATCCCCTGGACGAAGA...TGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR GCA 90 bp | GCCGAAGGGGGCCCCTGGAGGCCCACACCACACTTGGGCTCAGCAGCAGCCACAGACTGCAGGCAGGGGTaGCTTGACCATAGACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: AEGGPWRPTPHLGSAAATDCRQG*LDHRLE Trigger: CTCCAGTCTATGGTCAAGGCACCCCTGCCTGCAGTC...TGTGGCTGCTGCTGAGCCCAAGTGTGGTGTGGGCCTCCAGGGGCCCCCTTCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCATGTGCTCTGGTGCCTTaGGCTGAGCACAGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GGGQMRSAAPGRCTLAEACALVP*AEHRGH Trigger: GTGGCCCCTGTGCTCAGCCCAAGGCACCAGAGCACA...TGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR TCA 90 bp | CAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGAGGCATCTTCGTCCAGGGGATaGGGGCCTGAGAAGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: QMRSAAPGRCTLAEAQEASSSRG*GPEKVP Trigger: GGGGACCTTCTCAGGCCCTCATCCCCTGGACGAAGA...TGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR GCA 90 bp | GCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGGTCCTTGTGCTCTGGTaGCTTGGGCTGAGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: ADRCEAQLPVGAHWLRHRVLVLW*LGLSTG Trigger: CCCTGTGCTCAGCCCAAGGCACCAGAGCACAAGGAC...CCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | CACGGGAAACAAGGTAAAGGGGAGGCCACTGCAGGCTGCTCGCTGAACCCCCAGGGTGGGATCCAGTGGTaGGCAACCCCGCTGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HGKQGKGEATAGCSLNPQGGIQW*ATPLLV Trigger: CACCAGCAGCGGGGTTGCCCACCACTGGATCCCACC...CTGGGGGTTCAGCGAGCAGCCTGCAGTGGCCTCCCCTTTACCTTGTTTCCCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGGGGTCCTTGTGCTCTaGTGCCTTGGGCTGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: GGQMRSAAPGRCTLAEAQGVLVL*CLGLST Trigger: TGTGCTCAGCCCAAGGCACCAGAGCACAAGGACCCC...CTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR TCA 90 bp | TGGCTGAGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACATCTGGTGCCTTGGGCTaGGCACAGGGGCCACCATGT | + |
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Preference number: 4 (lower is better) Translates to: WLRHRRQSSRQYSDHARTSGALG*AQGPPC Trigger: ACATGGTGGCCCCTGTGCTCAGCCCAAGGCACCAGA...TGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCTCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | AGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAGTAGCCTGTGCTCTGGTGCCTTaGGCTGAGCACAGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RHRRQSSRQYSDHARTVACALVP*AEHRGH Trigger: GTGGCCCCTGTGCTCAGCCCAAGGCACCAGAGCACA...GGCTACTGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | ATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGAGGCAAAGGGGGTCCTTGTGCTCTaGTGCCTTGGGCTGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: MRSAAPGRCTLAEAQEAKGVLVL*CLGLST Trigger: TGTGCTCAGCCCAAGGCACCAGAGCACAAGGACCCC...CTTTGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | AGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAGTAGCCGTGGTCAGCGAGCTCTaGGGGCTGGGGCTCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RHRRQSSRQYSDHARTVAVVSEL*GLGLCK Trigger: TTTGCAGAGCCCCAGCCCCCAGAGCTCGCTGACCAC...GGCTACTGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR TCA 90 bp | GCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGTTTCTGCCAAAGACTTaGTGCCAAGTGTCCGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ADRCEAQLPVGAHWLRHRFLPKT*CQVSAW Trigger: CCAGGCGGACACTTGGCATCAAGTCTTTGGCAGAAA...CCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR TCA 90 bp | CCGGCAGGGCCCACAGCGGCAGCTGAGGGCTACAGGAAAGGAGACTATGGGGTCCCATCTTGTTCACTGTaGAGGGTTGGCCAGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: PAGPTAAAEGYRKGDYGVPSCSL*RVGQPS Trigger: AGATGGCTGGCCAACCCTTCACAGTGAACAAGATGG...GACCCCATAGTCTCCTTTCCTGTAGCCCTCAGCTGCCGCTGTGGGCCCTGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACCTCAGTTTCAGAAATaGGAGACCAAGGGGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: GGGQMRSAAPGRCTLAEAPQFQK*ETKGAH Trigger: ATGGGCCCCCTTGGTCTCCCATTTCTGAAACTGAGG...TGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACACTCTGATCCACATCTaGCCAGCCCTTGTACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: EADRCEAQLPVGAHWLRHTLIHI*PALVLC Trigger: GCACAGTACAAGGGCTGGCCAGATGTGGATCAGAGT...GTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR GCA 90 bp | TGGCTGAGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAGACTGCAGGCAGGGGTaGCTTGACCATAGACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: WLRHRRQSSRQYSDHARTDCRQG*LDHRLE Trigger: CTCCAGTCTATGGTCAAGGCACCCCTGCCTGCAGTC...TGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCTCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGCCTTGACCATAGACTaGAGAGTAGGCAGAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGQMRSAAPGRCTLAEAQALTID*RVGRGK Trigger: CTTTCCTCTGCCTACTCTCCAGTCTATGGTCAAGGC...CTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
||
| CDS-3UTR CCA 90 bp | CAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGAGGCATTCACTGTGAAGGGTTaGCCAGCCATCTCAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QMRSAAPGRCTLAEAQEAFTVKG*PAISGF Trigger: GAACCCTGAGATGGCTGGCCAACCCTTCACAGTGAA...TGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
||
| CDS-3UTR TCA 90 bp | ATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGAGGCAAAGTTTCTGCCAAAGACTTaGTGCCAAGTGTCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MRSAAPGRCTLAEAQEAKFLPKT*CQVSAW Trigger: CCAGGCGGACACTTGGCATCAAGTCTTTGGCAGAAA...CTTTGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR TCA 90 bp | ATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGAGGCAAAGCCATCTTGTTCACTGTaGAGGGTTGGCCAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MRSAAPGRCTLAEAQEAKPSCSL*RVGQPS Trigger: AGATGGCTGGCCAACCCTTCACAGTGAACAAGATGG...CTTTGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCGCCGAAGGGGGCCCCTaGAGGCCCACACCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLCPQSLLKNMEAQLESAEGGP*RPTPHL Trigger: CAAGTGTGGTGTGGGCCTCCAGGGGCCCCCTTCGGC...GCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR CCA 90 bp | GAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGGAGGGATGGGCCCACACCACACTTaGGCTCAGCAGCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EHGSAVGKPLLGRREGGMGPHHT*AQQQPQ Trigger: CTGTGGCTGCTGCTGAGCCCAAGTGTGGTGTGGGCC...CATCCCTCCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR CCA 90 bp | AGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAGTAGCCCCTCAGTTTCAGAAATaGGAGACCAAGGGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHRRQSSRQYSDHARTVAPQFQK*ETKGAH Trigger: ATGGGCCCCCTTGGTCTCCCATTTCTGAAACTGAGG...GGCTACTGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
||
| CDS-3UTR CCA 90 bp | AGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAGTAGCCACTCTGATCCACATCTaGCCAGCCCTTGTACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RHRRQSSRQYSDHARTVATLIHI*PALVLC Trigger: GCACAGTACAAGGGCTGGCCAGATGTGGATCAGAGT...GGCTACTGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | TGGCTGAGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACATTCACTGTGAAGGGTTaGCCAGCCATCTCAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WLRHRRQSSRQYSDHARTFTVKG*PAISGF Trigger: GAACCCTGAGATGGCTGGCCAACCCTTCACAGTGAA...TGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCTCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
||
| CDS-3UTR TCA 90 bp | CCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGCGGCCAGAGTTGCGTTaGCAGGCCGGCACAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTKEHGSAVGKPLLGRRERPELR*QAGTVA Trigger: GGCCACTGTGCCGGCCTGTCAACGCAACTCTGGCCG...CTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR TCA 90 bp | AGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGGAGGGATGCCCACAGCGGCAGCTaGGGGCTACAGGAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTWKRSWKAFIGKEGGRDAHSGS*GLQERR Trigger: TCTCCTTTCCTGTAGCCCTCAGCTGCCGCTGTGGGC...ATCCCTCCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTCACAGTCAGAGCTACTaGGCCGGCAGGGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCPQSLLKNMEAQLESLHSQSY*AGRAHS Trigger: GCTGTGGGCCCTGCCGGCTCAGTAGCTCTGACTGTG...AAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGGAGGGAGGGAGGCGGACAGATaGGAAGCGCAGCTCCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KEHGSAVGKPLLGRREGGREADR*EAQLPV Trigger: TACCGGGAGCTGCGCTTCGCATCTGTCCGCCTCCCT...CCCTCCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATGGGGTCTACACCCGGTaGGCAGCCAGGGAGGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCPQSLLKNMEAQLESLYGVYTR*AAREAD Trigger: GTCCGCCTCCCTGGCTGCCCACCGGGTGTAGACCCC...ATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR CCA 90 bp | AGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAGTAGCCGCCTTGACCATAGACTaGAGAGTAGGCAGAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHRRQSSRQYSDHARTVAALTID*RVGRGK Trigger: CTTTCCTCTGCCTACTCTCCAGTCTATGGTCAAGGC...GGCTACTGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR TCA 90 bp | ACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGGAGGGATGATTCACAGGCCATTGGTTaGGTCCTGGGACCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TWKRSWKAFIGKEGGRDDSQAIG*VLGPPQ Trigger: CTGTGGGGGTCCCAGGACTCAACCAATGGCCTGTGA...ATCATCCCTCCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCCGGTAGGTGCACACTaGCTGAGGCACAGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLCPQSLLKNMEAQLESPVGAH*LRHRRQ Trigger: TTGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGG...GCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR CCA 90 bp | CCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGAGGAGGCCGGGGAGGTaGGGGAGGTCACAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PTKEHGSAVGKPLLGRRERRPGR*GRSQAI Trigger: AATGGCCTGTGACCTCCCCCACCTCCCCGGCCTCCT...CTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR GCA 90 bp | GCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTAGCAGCTCCCGGTAGGTaGACACTGGCTGAGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSSEPTKEHGSAVGKPLAAPGR*TLAEAQ Trigger: CTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGC...TAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGTTCTGCACCCACTCAGTATAATACAGAAACTGTCCTTCAAGACCCATCACTTGCCCGATCCCGGTaGGATGCCTTCCTCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGSAPTQYNTETVLQDPSLARSR*DAFLGQ Trigger: CTGGCCGAGGAAGGCATCCCACCGGGATCGGGCAAG...TGATGGGTCTTGAAGGACAGTTTCTGTATTATACTGAGTGGGTGCAGAACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTTCTGCACCCACTCAGTATAATACAGAAACTGTCCTTCAAGACCCATCAGTGGTCAGCGAGCTCTaGGGGCTGGGGCTCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSAPTQYNTETVLQDPSVVSEL*GLGLCK Trigger: TTTGCAGAGCCCCAGCCCCCAGAGCTCGCTGACCAC...TGATGGGTCTTGAAGGACAGTTTCTGTATTATACTGAGTGGGTGCAGAACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | GCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTACCATTGGTTGAGTCCTaGGACCCCCACAGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVSSEPTKEHGSAVGKPLPLVES*DPHSQS Trigger: GCTCTGACTGTGGGGGTCCCAGGACTCAACCAATGG...TAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR CCA 90 bp | CTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATGAGGTCACAGGCCATTaGTTGAGTCCTGGGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCPQSLLKNMEAQLESLYEVTGH*LSPGTP Trigger: GGGGGTCCCAGGACTCAACCAATGGCCTGTGACCTC...ATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR CCA 90 bp | ACAGGCTTGGGTAACCTAGACACTAATCTCTTTGGGGGCGAGACACAGACAAGGCAGTGCAGTAGGCCTTaGGTACACTGTAAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLGNLDTNLFGGETQTRQCSRP*VHCKGP Trigger: TGGGCCTTTACAGTGTACCCAAGGCCTACTGCACTG...CCTTGTCTGTGTCTCGCCCCCAAAGAGATTAGTGTCTAGGTTACCCAAGCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| 3UTR CAA 72 bp | TGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTaGGAAAGCCTTTATTGGGAAGGAGGGAGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPQSLLKNMEAQ*ESLYWEGGREG Trigger: TCCCTCCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR GCA 90 bp | GACCCATCACCAGCCATGAAATCTGTTTATCTCCTGTTTGAAGTCCACCAGCTAAGCGGGAATTCTCAGTaGAGTAGGCCTTGGGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: DPSPAMKSVYLLFEVHQLSGNSQ*SRPWVH Trigger: GTGTACCCAAGGCCTACTGCACTGAGAATTCCCGCT...TAGCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
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| CDS-3UTR CCA 90 bp | CCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGAAGGTGATGCAGACTaGGCAGAACTCATTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTKEHGSAVGKPLLGRREEGDAD*AELILC Trigger: GCAGAGAATGAGTTCTGCCCAGTCTGCATCACCTTC...CTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
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| CDS-3UTR CAA 90 bp | GGAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCAGTCCGCCTGGGGTCCTaGTGCTCTGGTGCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGQMRSAAPGRCTLAEAVRLGS*CSGALG Trigger: GCCCAAGGCACCAGAGCACAAGGACCCCAGGCGGAC...TGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGAGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAGTCCGCCTGGGGTCCTaGTGCTCTGGTGCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WLRHRRQSSRQYSDHARTVRLGS*CSGALG Trigger: GCCCAAGGCACCAGAGCACAAGGACCCCAGGCGGAC...TGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCTCAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CAA 90 bp | GAGGCGGACAGATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACGTTCACTGTGAAGGGTaGGCCAGCCATCTCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EADRCEAQLPVGAHWLRHVHCEG*ASHLRV Trigger: AACCCTGAGATGGCTGGCCAACCCTTCACAGTGAAC...GTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCATCTGTCCGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CAA 90 bp | ATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGAGGCAAAGCTGGTGAGATGCCAGTaGGGCCAGGTTCCAAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: MRSAAPGRCTLAEAQEAKLVRCQ*GQVPST Trigger: GGTACTTGGAACCTGGCCCAACTGGCATCTCACCAG...CTTTGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS CCA 90 bp | TGCCTTGACCATAGACTGGAGAGTAGGCAGAGGAAAGGACGCCGGTaGGATCCAGTGGTGGGCAACCCCGCTGCTGGTGAGATGCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLDHRLESRQRKGRR*DPVVGNPAAGEMPV Trigger: AACTGGCATCTCACCAGCAGCGGGGTTGCCCACCACTGGATCCCACCGGCGTCCTTTCCTCTGCCTACTCTCCAGTCTATGGTCAAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGAGGCACAGGAGGCAAAGCAGCCGGCAGTACTCGGACCATGCTAGGACAGCAGGCAGGGGTGCCTaGACCATAGACTGGAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: WLRHRRQSSRQYSDHARTAGRGA*TIDWRV Trigger: TACTCTCCAGTCTATGGTCAAGGCACCCCTGCCTGC...TGTCCTAGCATGGTCCGAGTACTGCCGGCTGCTTTGCCTCCTGTGCCTCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS TCA 90 bp | GAAAGGACGCCGGTGGGATCCAGTGGTGGGCAACCCCGCTGCTGGTaGGATGCCAGTTGGGCCAGGTTCCAAGTACCTCAGTTTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ERTPVGSSGGQPRCW*DASWARFQVPQFQK Trigger: TTTCTGAAACTGAGGTACTTGGAACCTGGCCCAACTGGCATCTCACCAGCAGCGGGGTTGCCCACCACTGGATCCCACCGGCGTCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS CCA 90 bp | CGGTGGGATGCCTTCCTCGGCCAGCTCAGGCCCATCACCGGTTTCTaGTGGGGATATCCAGACACGTTCCTTGTGAAGTCACTTGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RWDAFLGQLRPITGF*WGYPDTFLVKSLAV Trigger: TACTGCAAGTGACTTCACAAGGAACGTGTCTGGATATCCCCACCAGAAACCGGTGATGGGCCTGAGCTGGCCGAGGAAGGCATCCCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS-3UTR CAA 90 bp | ATGCGAAGCGCAGCTCCCGGTAGGTGCACACTGGCTGAGGCACAGGAGGCAAAGTTTTCTGCCAAAGACTaGATGCCAAGTGTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRSAAPGRCTLAEAQEAKFSAKD*MPSVRL Trigger: CAGGCGGACACTTGGCATCAAGTCTTTGGCAGAAAA...CTTTGCCTCCTGTGCCTCAGCCAGTGTGCACCTACCGGGAGCTGCGCTTCGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGCTGTGTCCTCAGAGCCTACTAAAGAACATGGAAGCGCAGTTGGAAAGCAGGCCCACACCACACTaGGGCTCAGCAGCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PLLCPQSLLKNMEAQLESRPTPH*GSAAAT Trigger: TGTGGCTGCTGCTGAGCCCAAGTGTGGTGTGGGCCT...GCTTTCCAACTGCGCTTCCATGTTCTTTAGTAGGCTCTGAGGACACAGCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
||
| CDS CCA 90 bp | TGGGATGCCTTCCTCGGCCAGCTCAGGCCCATCACCGGTTTCTGGTaGGGATATCCAGACACGTTCCTTGTGAAGTCACTTGCAGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: WDAFLGQLRPITGFW*GYPDTFLVKSLAVM Trigger: CATTACTGCAAGTGACTTCACAAGGAACGTGTCTGGATATCCCCACCAGAAACCGGTGATGGGCCTGAGCTGGCCGAGGAAGGCATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238591.2 ENSMUST00000238638.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAACATGGAAGCGCAGTTGGAAAGCCTTTATTGGGAAGGAGGGAGGGAGGGGTCACAGGCCATTGGTaGAGTCCTGGGACCCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KEHGSAVGKPLLGRREGGVTGHW*SPGTPT Trigger: TGTGGGGGTCCCAGGACTCAACCAATGGCCTGTGAC...CCCTCCCTCCCTCCTTCCCAATAAAGGCTTTCCAACTGCGCTTCCATGTTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072453.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTTGGGTAACCTAGACACTAATCTCTTTGGGGGCGAGACACAGACAAGGCTGGTGAGATGCCAGTaGGGCCAGGTTCCAAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: TGLGNLDTNLFGGETQTRLVRCQ*GQVPST Trigger: GGTACTTGGAACCTGGCCCAACTGGCATCTCACCAG...CCTTGTCTGTGTCTCGCCCCCAAAGAGATTAGTGTCTAGGTTACCCAAGCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
||
| CDS-3UTR CAA 90 bp | GACCCATCACCAGCCATGAAATCTGTTTATCTCCTGTTTGAAGTCCACCAGCTAGTTCACTGTGAAGGGTaGGCCAGCCATCTCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DPSPAMKSVYLLFEVHQLVHCEG*ASHLRV Trigger: AACCCTGAGATGGCTGGCCAACCCTTCACAGTGAAC...TAGCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
||
| CDS-3UTR CAA 90 bp | CCATCACCAGCCATGAAATCTGTTTATCTCCTGTTTGAAGTCCACCAGCTAGGATTTTCTGCCAAAGACTaGATGCCAAGTGTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPAMKSVYLLFEVHQLGFSAKD*MPSVRL Trigger: CAGGCGGACACTTGGCATCAAGTCTTTGGCAGAAAA...TCCTAGCTGGTGGACTTCAAACAGGAGATAAACAGATTTCATGGCTGGTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238591.2 |
||
| CDS GCA 72 bp | GACTCCCGGGTCAGAGACAGGGCTCCCAGGTACGGCTaGGATGGGCGTGGCCGGGCTGGGCGCACCCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: DSRVRDRAPRYG*DGRGRAGRTLG Trigger: ACCGAGGGTGCGCCCAGCCCGGCCACGCCCATCGCAGCCGTACCTGGGAGCCCTGTCTCTGACCCGGGAGTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238591.2 ENSMUST00000238638.2 |
||
| CDS TCA 72 bp | GCCATCTCAGGGTTCTTCGTCCAGGGGATGAGGGCCTaGGAAGGTCCCCCGCGATGGTGGTCAGCGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AISGFFVQGMRA*EGPPRWWSASS Trigger: AGAGCTCGCTGACCACCATCGCGGGGGACCTTCTCAGGCCCTCATCCCCTGGACGAAGAACCCTGAGATGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS GCA 72 bp | CACTGTAAAGGCCCAGCACTGGCTTCCGATGGGGGCTaGCCCACGATGCATGTACTGGGCAAATTCGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: HCKGPALASDGG*PTMHVLGKFGP Trigger: TGGACCGAATTTGCCCAGTACATGCATCGTGGGGCAGCCCCCATCGGAAGCCAGTGCTGGGCCTTTACAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS GCA 72 bp | GCTCCGCCCTGGCACTCCCATAGCGGGAATTCTCAGTaGAGTAGGCCTTGGGTACACTGTAAAGGCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: APPWHSHSGNSQ*SRPWVHCKGPA Trigger: TGCTGGGCCTTTACAGTGTACCCAAGGCCTACTGCACTGAGAATTCCCGCTATGGGAGTGCCAGGGCGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS CCA 72 bp | GCCTTCCTCGGCCAGCTCAGGCCCATCACCGGTTTCTaGTGGGGATATCCAGACACGTTCCTTGTGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: AFLGQLRPITGF*WGYPDTFLVKS Trigger: TGACTTCACAAGGAACGTGTCTGGATATCCCCACCAGAAACCGGTGATGGGCCTGAGCTGGCCGAGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS CCA 72 bp | CACTCCCATAGCGGGAATTCTCAGTGCAGTAGGCCTTaGGTACACTGTAAAGGCCCAGCACTGGCTTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: HSHSGNSQCSRP*VHCKGPALASD Trigger: ATCGGAAGCCAGTGCTGGGCCTTTACAGTGTACCCAAGGCCTACTGCACTGAGAATTCCCGCTATGGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS CCA 72 bp | AGTTGGGCCAGGTTCCAAGTACCTCAGTTTCAGAAATaGGAGACCAAGGGGGCCCATATCGAAGAGCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SWARFQVPQFQK*ETKGAHIEELG Trigger: CCCTAGCTCTTCGATATGGGCCCCCTTGGTCTCCCATTTCTGAAACTGAGGTACTTGGAACCTGGCCCAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 ENSMUST00000238638.2 |
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| CDS GCA 72 bp | GGCACTCTGATCCACATCTGGCCAGCCCTTGTACTGTaGCTTCGTCTCACTGATCTGGCATTTTGTGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GTLIHIWPALVL*LRLTDLAFCVQ Trigger: CTGAACACAAAATGCCAGATCAGTGAGACGAAGGCACAGTACAAGGGCTGGCCAGATGTGGATCAGAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000238437.2 ENSMUST00000238591.2 ENSMUST00000238638.2 |
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