Pregenerated sensors for LGSN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050217Ensembl transcript IDs: ENSMUST00000062560.14, ENSMUST00000161773.3
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAACCAGCCGCAGCACCATCACTGCTCTGAAGACCATCCAAGCCTaGTGCCACAGTGGCCGCCAACACCAGGTAAGGGTTCGCGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: GTSRSTITALKTIQA*CHSGRQHQVRVRGC Trigger: GCAACCGCGAACCCTTACCTGGTGTTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCTGCGGCTGGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 90 bp | ACCAGCCGCAGCACCATCACTGCTCTGAAGACCATCCAAGCCTGCTaGCACAGTGGCCGCCAACACCAGGTAAGGGTTCGCGGTTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: TSRSTITALKTIQAC*HSGRQHQVRVRGCR Trigger: TCTGCAACCGCGAACCCTTACCTGGTGTTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCTGCGGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CCA 90 bp | CAGCACCATCACTGCTCTGAAGACCATCCAAGCCTGCTGCCACAGTaGCCGCCAACACCAGGTAAGGGTTCGCGGTTGCAGACCCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: QHHHCSEDHPSLLPQ*PPTPGKGSRLQTLV Trigger: AACTAGGGTCTGCAACCGCGAACCCTTACCTGGTGTTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 90 bp | GATAGAGATCCTGACTCTCATCGGAACCAGCCGCAGCACCATCACTaGTCTGAAGACCATCCAAGCCTGCTGCCACAGTGGCCGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: DRDPDSHRNQPQHHH*SEDHPSLLPQWPPT Trigger: TGTTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCTGCGGCTGGTTCCGATGAGAGTCAGGATCTCTATC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CCA 90 bp | GGCGGCAAGGGCATCTTCCATCTTCAAAGGGATCTCGGAAGGTTCTaGTTGATAGAGATCCTGACTCTCATCGGAACCAGCCGCAGCACC | + |
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Preference number: 1 (lower is better) Translates to: GGKGIFHLQRDLGRF*LIEILTLIGTSRST Trigger: GGTGCTGCGGCTGGTTCCGATGAGAGTCAGGATCTCTATCAACCAGAACCTTCCGAGATCCCTTTGAAGATGGAAGATGCCCTTGCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR TCA 90 bp | CCACATTCGCCCCTGTCTGATACAGGCCCTCAACCAGTTCCTGCATaGAGGGCTGATCATGGTTACTTAGTAATGTGGAGGCAGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: PHSPLSDTGPQPVPA*RADHGYLVMWRQEK Trigger: CTTTTCCTGCCTCCACATTACTAAGTAACCATGATCAGCCCTTCATGCAGGAACTGGTTGAGGGCCTGTATCAGACAGGGGCGAATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CCA 90 bp | CGCAGTCCTCTCTGCCCAAGGCAAGACTCTGAAGGTCGACAGCTCTaGCATGAGGACTATATCACTATTGAAGCATGTGGCTCTTATGTG | + |
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Preference number: 1 (lower is better) Translates to: RSPLCPRQDSEGRQL*HEDYITIEACGSYV Trigger: CACATAAGAGCCACATGCTTCAATAGTGATATAGTCCTCATGCCAGAGCTGTCGACCTTCAGAGTCTTGCCTTGGGCAGAGAGGACTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CCA 90 bp | GAGATCAGGATCCGAGCAATCCCGTTTCAGCTGCCCAGTAATCCATaGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACT | + |
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Preference number: 1 (lower is better) Translates to: EIRIRAIPFQLPSNP*ERGRSCLVLFITKT Trigger: AGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCATGGATTACTGGGCAGCTGAAACGGGATTGCTCGGATCCTGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| 3UTR TCA 90 bp | CTTCGTTTTCCAGTTCATACTTCTTCATGGCAACAAAGTAGCGGATaGAAGTCTCTCCCAGAGCCTGCTTCAGACACTCATCTTGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LRFPVHTSSWQQSSG*KSLPEPASDTHLAP Trigger: TGGAGCAAGATGAGTGTCTGAAGCAGGCTCTGGGAGAGACTTTCATCCGCTACTTTGTTGCCATGAAGAAGTATGAACTGGAAAACGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR TCA 90 bp | CCACTGCAGAACATATTTGTCTTCCCGCCCACATCCCAGATGCTATaGGACAAAATTCCTGAATTGCAGAATCCAGTCTCAATTACAAGG | + |
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Preference number: 1 (lower is better) Translates to: PLQNIFVFPPTSQML*DKIPELQNPVSITR Trigger: CCTTGTAATTGAGACTGGATTCTGCAATTCAGGAATTTTGTCTCATAGCATCTGGGATGTGGGCGGGAAGACAAATATGTTCTGCAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 90 bp | CAGAACCACTGCAGAACATATTTGTCTTCCCGCCCACATCCCAGATaGTATGAGACAAAATTCCTGAATTGCAGAATCCAGTCTCAATTA | + |
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Preference number: 1 (lower is better) Translates to: QNHCRTYLSSRPHPR*YETKFLNCRIQSQL Trigger: TAATTGAGACTGGATTCTGCAATTCAGGAATTTTGTCTCATAGCATCTGGGATGTGGGCGGGAAGACAAATATGTTCTGCAGTGGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR TCA 90 bp | ATTTGTCTTCCCGCCCACATCCCAGATGCTATGAGACAAAATTCCTaGATTGCAGAATCCAGTCTCAATTACAAGGCTAGCTATGTAATT | + |
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Preference number: 1 (lower is better) Translates to: ICLPAHIPDAMRQNS*IAESSLNYKASYVI Trigger: AATTACATAGCTAGCCTTGTAATTGAGACTGGATTCTGCAATTCAGGAATTTTGTCTCATAGCATCTGGGATGTGGGCGGGAAGACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGACCGCAGGGGCCATCAGGCAGCTGAGAGCCGCAGAGTGCTTCAGCAGGCCAAACAGATCTCCATCTaGCCAGGCCTGGTAGACGAG | + |
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Preference number: 2 (lower is better) Translates to: VDRRGHQAAESRRVLQQAKQISI*PGLVDE Trigger: CTCGTCTACCAGGCCTGGGCAGATGGAGATCTGTTT...GGCCTGCTGAAGCACTCTGCGGCTCTCAGCTGCCTGATGGCCCCTGCGGTCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGCCTGCCAACCACTTCTTCCCGGTGAGCGTGAGCCTCTCCACCCCAGAACCTCGCAGTCCTCTCTaGCCAAGGCAAGACTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: SRPANHFFPVSVSLSTPEPRSPL*PRQDSE Trigger: TTCAGAGTCTTGCCTTGGGCAGAGAGGACTGCGAGG...TTCTGGGGTGGAGAGGCTCACGCTCACCGGGAAGAAGTGGTTGGCAGGCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CAA 90 bp | AGCCTGCTGCCACAGTGGCCGCCAACACCAGGTAAGGGTTCGCGGTaGCAGACCCTAGTTTATTTTCTATCTGGGTGCCTTTTTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: SLLPQWPPTPGKGSR*QTLVYFLSGCLFHH Trigger: ATGGTGAAAAAGGCACCCAGATAGAAAATAAACTAGGGTCTGCAACCGCGAACCCTTACCTGGTGTTGGCGGCCACTGTGGCAGCAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CAA 90 bp | GGCAAGGGCATCTTCCATCTTCAAAGGGATCTCGGAAGGTTCTGGTaGATAGAGATCCTGACTCTCATCGGAACCAGCCGCAGCACCATC | + |
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Preference number: 2 (lower is better) Translates to: GKGIFHLQRDLGRFW*IEILTLIGTSRSTI Trigger: GATGGTGCTGCGGCTGGTTCCGATGAGAGTCAGGATCTCTATCAACCAGAACCTTCCGAGATCCCTTTGAAGATGGAAGATGCCCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGCCTTTTTCACCATGACACTTGATGTTCAAGGCACAGCTGTTGTCATTGTAAGCGCTTGCGACAGTTaGCCGCAGGGGCCATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GAFFTMTLDVQGTAVVIVSACDS*PQGPSG Trigger: GCCTGATGGCCCCTGCGGTCAACTGTCGCAAGCGCT...TACAATGACAACAGCTGTGCCTTGAACATCAAGTGTCATGGTGAAAAAGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCAGACACTCATCTTGCTCCAGGGCGGCAAGGGCATCTTCCATCTTCAAACTGCCCAGTAATCCATaGGAGAGGGGCAGAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: CFRHSSCSRAARASSIFKLPSNP*ERGRSC Trigger: ACAGCTTCTGCCCCTCTCCCATGGATTACTGGGCAG...TTTGAAGATGGAAGATGCCCTTGCCGCCCTGGAGCAAGATGAGTGTCTGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR TCA 90 bp | TGTCATTGTATCCCCACGTGGTGGGCACGCTGTCCTTCAGGTCTCTGCTGTCCTATGAGACAAAATTCCTaGATTGCAGAATCCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: CHCIPTWWARCPSGLCCPMRQNS*IAESSL Trigger: GAGACTGGATTCTGCAATTCAGGAATTTTGTCTCAT...AGGACAGCAGAGACCTGAAGGACAGCGTGCCCACCACGTGGGGATACAATGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR TCA 90 bp | CCAACACCAGGTAAGGGTTCGCGGTTGCAGACCCTAGTTTATTTTCTATCTGGGTCCTGCATGAAGGGCTaGTCATGGTTACTTAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: PTPGKGSRLQTLVYFLSGSCMKG*SWLLSN Trigger: ATTACTAAGTAACCATGATCAGCCCTTCATGCAGGA...CCCAGATAGAAAATAAACTAGGGTCTGCAACCGCGAACCCTTACCTGGTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGCCTTTTTCACCATGACACTTGATGTTCAAGGCACAGCTGTTGTCATTGTACAACCAGTTCCTGCATaGAGGGCTGATCATGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: GAFFTMTLDVQGTAVVIVQPVPA*RADHGY Trigger: GTAACCATGATCAGCCCTTCATGCAGGAACTGGTTG...TACAATGACAACAGCTGTGCCTTGAACATCAAGTGTCATGGTGAAAAAGGCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGCCTTTTTCACCATGACACTTGATGTTCAAGGCACAGCTGTTGTCATTGTATGCAGAAATCATAGATaGAAGCGGACAGCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GAFFTMTLDVQGTAVVIVCRNHR*KRTAGR Trigger: TCTGCCTGCTGTCCGCTTTCATCTATGATTTCTGCA...TACAATGACAACAGCTGTGCCTTGAACATCAAGTGTCATGGTGAAAAAGGCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CAA 90 bp | CAGCTGCCCAGTAATCCATGGGAGAGGGGCAGAAGCTGTCTAGTATaGTTCATTACAAAGACTCAATCTTTTCTTTCTGATAAACTAGCT | + |
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Preference number: 2 (lower is better) Translates to: QLPSNPWERGRSCLV*FITKTQSFLSDKLA Trigger: AGCTAGTTTATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCATGGATTACTGGGCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| 3UTR-3UTR TCA 90 bp | TTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCCCGTTTGGACTATATCACTATTaGAGCATGTGGCTCTTATGT | + |
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Preference number: 2 (lower is better) Translates to: FTTNLLFIAEIRIRAIPFGLYHY*SMWLLC Trigger: ACATAAGAGCCACATGCTTCAATAGTGATATAGTCC...AAACGGGATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTATTTCCCTCTGCATCTGTTTCTTCGTTTTCCAGTTCATACTTCTTCATGGAAAAGATATGGTCTTTaGATTGATCACTTCGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: IYFPLHLFLRFPVHTSSWKRYGL*IDHFGH Trigger: GTGCCCGAAGTGATCAATTCAAAGACCATATCTTTT...CCATGAAGAAGTATGAACTGGAAAACGAAGAAACAGATGCAGAGGGAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTATTTCCCTCTGCATCTGTTTCTTCGTTTTCCAGTTCATACTTCTTCATGGACATCCCAGATGCTATaGGACAAAATTCCTGAATTG | + |
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Preference number: 2 (lower is better) Translates to: IYFPLHLFLRFPVHTSSWTSQML*DKIPEL Trigger: CAATTCAGGAATTTTGTCTCATAGCATCTGGGATGT...CCATGAAGAAGTATGAACTGGAAAACGAAGAAACAGATGCAGAGGGAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 72 bp | CAGGCAGCTGAGAGCCGCAGAGTGCTTCAGCAGGCCTaGCAACCACTTCTTCCCGGTGAGCGTGAGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: QAAESRRVLQQA*QPLLPGEREPL Trigger: GAGAGGCTCACGCTCACCGGGAAGAAGTGGTTGGCAGGCCTGCTGAAGCACTCTGCGGCTCTCAGCTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR TCA 72 bp | CTCTCATCGGAACCAGCCGCAGCACCATCACTGCTCTaGAGACCATCCAAGCCTGCTGCCACAGTGGCCGCC | + |
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Preference number: 3 (lower is better) Translates to: LSSEPAAAPSLL*RPSKPAATVAA Trigger: GGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCTGCGGCTGGTTCCGATGAGAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CCA 72 bp | CACTGCTCTGAAGACCATCCAAGCCTGCTGCCACAGTaGCCGCCAACACCAGGTAAGGGTTCGCGGTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: HCSEDHPSLLPQ*PPTPGKGSRLQ Trigger: CTGCAACCGCGAACCCTTACCTGGTGTTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR CAA 90 bp | CATCACTGCTCTGAAGACCATCCAAGCCTGCTGCCACAGTGGCCGCCAACACCATGGCGCAGCTGCCTCTaGGCGATGTACCTAGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: HHCSEDHPSLLPQWPPTPWRSCL*AMYLGD Trigger: ATCCCCTAGGTACATCGCCAAGAGGCAGCTGCGCCA...TGGTGTTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 72 bp | AGCACCATCACTGCTCTGAAGACCATCCAAGCCTGCTaGCACAGTGGCCGCCAACACCAGGTAAGGGTTCGC | + |
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Preference number: 3 (lower is better) Translates to: STITALKTIQAC*HSGRQHQVRVR Trigger: GCGAACCCTTACCTGGTGTTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 72 bp | CGCAGCACCATCACTGCTCTGAAGACCATCCAAGCCTaGTGCCACAGTGGCCGCCAACACCAGGTAAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: RSTITALKTIQA*CHSGRQHQVRV Trigger: AACCCTTACCTGGTGTTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 72 bp | CCTGACTCTCATCGGAACCAGCCGCAGCACCATCACTaGTCTGAAGACCATCCAAGCCTGCTGCCACAGTGG | + |
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Preference number: 3 (lower is better) Translates to: PDSHRNQPQHHH*SEDHPSLLPQW Trigger: CCACTGTGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCTGCGGCTGGTTCCGATGAGAGTCAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGGGCGGCAAGGGCATCTTCCATCTTCAAAGGGATCTCGGAAGGTTCTGGGCACAGCTGTTGTCATaGTATCCCCACGTGGTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LQGGKGIFHLQRDLGRFWAQLLS*YPHVVG Trigger: GCCCACCACGTGGGGATACAATGACAACAGCTGTGC...CCAGAACCTTCCGAGATCCCTTTGAAGATGGAAGATGCCCTTGCCGCCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CCA 72 bp | TCAAGGCACAGCTGTTGTCATTGTATCCCCACGTGGTaGGCACGCTGTCCTTCAGGTCTCTGCTGTCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SRHSCCHCIPTW*ARCPSGLCCPC Trigger: GCAAGGACAGCAGAGACCTGAAGGACAGCGTGCCCACCACGTGGGGATACAATGACAACAGCTGTGCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 72 bp | TGTGAAGGTGTCACAAATCACCCTCGCAGTCCTCTCTaGCCAAGGCAAGACTCTGAAGGTCGACAGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: CEGVTNHPRSPL*PRQDSEGRQLW Trigger: CCAGAGCTGTCGACCTTCAGAGTCTTGCCTTGGGCAGAGAGGACTGCGAGGGTGATTTGTGACACCTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CCA 72 bp | TGTTCAAGGCACAGCTGTTGTCATTGTATCCCCACGTaGTGGGCACGCTGTCCTTCAGGTCTCTGCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: CSRHSCCHCIPT*WARCPSGLCCP Trigger: AGGACAGCAGAGACCTGAAGGACAGCGTGCCCACCACGTGGGGATACAATGACAACAGCTGTGCCTTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR TCA 72 bp | TCACTTCGGGCACACCAAAAATGCAGAAATCATAGATaGAAGCGGACAGCAGGCAGAAGCCGGCGTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SLRAHQKCRNHR*KRTAGRSRRPA Trigger: TGCAGGACGCCGGCTTCTGCCTGCTGTCCGCTTTCATCTATGATTTCTGCATTTTTGGTGTGCCCGAAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 72 bp | AAAGTCTCTCCCAGAGCCTGCTTCAGACACTCATCTTaGTCCAGGGCGGCAAGGGCATCTTCCATCTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: KVSPRACFRHSS*SRAARASSIFK Trigger: TTTGAAGATGGAAGATGCCCTTGCCGCCCTGGAGCAAGATGAGTGTCTGAAGCAGGCTCTGGGAGAGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CCA 72 bp | ATCCGAGCAATCCCGTTTCAGCTGCCCAGTAATCCATaGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATT | + |
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Preference number: 3 (lower is better) Translates to: IRAIPFQLPSNP*ERGRSCLVLFI Trigger: AATGAACAATACTAGACAGCTTCTGCCCCTCTCCCATGGATTACTGGGCAGCTGAAACGGGATTGCTCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| 3UTR-3UTR CAA 90 bp | TGCTTCAGACACTCATCTTGCTCCAGGGCGGCAAGGGCATCTTCCATCTTCAAAAGGACTATATCACTATaGAAGCATGTGGCTCTTATG | + |
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Preference number: 3 (lower is better) Translates to: CFRHSSCSRAARASSIFKRTISL*KHVALM Trigger: CATAAGAGCCACATGCTTCAATAGTGATATAGTCCT...TTTGAAGATGGAAGATGCCCTTGCCGCCCTGGAGCAAGATGAGTGTCTGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR TCA 72 bp | CCCGCCCACATCCCAGATGCTATGAGACAAAATTCCTaGATTGCAGAATCCAGTCTCAATTACAAGGCTAGC | + |
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Preference number: 3 (lower is better) Translates to: PAHIPDAMRQNS*IAESSLNYKAS Trigger: GCTAGCCTTGTAATTGAGACTGGATTCTGCAATTCAGGAATTTTGTCTCATAGCATCTGGGATGTGGGCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR GCA 72 bp | TGCAGAACATATTTGTCTTCCCGCCCACATCCCAGATaGTATGAGACAAAATTCCTGAATTGCAGAATCCAG | + |
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Preference number: 3 (lower is better) Translates to: CRTYLSSRPHPR*YETKFLNCRIQ Trigger: CTGGATTCTGCAATTCAGGAATTTTGTCTCATAGCATCTGGGATGTGGGCGGGAAGACAAATATGTTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR-3UTR CAA 90 bp | CTACAGGGCAGAGTCCCATCCTATATAAAATACTCCAGGAATTTATTTCCCTCTGGTAAGGGTTCGCGGTaGCAGACCCTAGTTTATTTT | + |
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Preference number: 3 (lower is better) Translates to: LQGRVPSYIKYSRNLFPSGKGSR*QTLVYF Trigger: AAAATAAACTAGGGTCTGCAACCGCGAACCCTTACC...AGAGGGAAATAAATTCCTGGAGTATTTTATATAGGATGGGACTCTGCCCTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| 3UTR CAA 72 bp | CCACAGTGGCCGCCAACACCAGGTAAGGGTTCGCGGTaGCAGACCCTAGTTTATTTTCTATCTGGGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PQWPPTPGKGSR*QTLVYFLSGCL Trigger: AAGGCACCCAGATAGAAAATAAACTAGGGTCTGCAACCGCGAACCCTTACCTGGTGTTGGCGGCCACTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| CDS-3UTR CCA 90 bp | CGGAACCAGCCGCAGCACCATCACTGCTCTGAAGACCATCCAAGCCTGCTGCCACTCAGATCTGCTATTTaGTTTCTGGACATCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: RNQPQHHHCSEDHPSLLPLRSAI*FLDISL Trigger: CAGTGAGATGTCCAGAAACCAAATAGCAGATCTGAG...TGGCAGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGCTGCGGCTGGTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| CDS-3UTR GCA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTCAGAAGCCGGCGTCCTaGAGCTGGCGCAGCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSQKPAS*SWRSCL Trigger: GAGGCAGCTGCGCCAGCTGCAGGACGCCGGCTTCTG...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR TCA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTAGCGCTTGCGACAGTTaGCCGCAGGGGCCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSSACDS*PQGPSG Trigger: GCCTGATGGCCCCTGCGGTCAACTGTCGCAAGCGCT...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| 3UTR CAA 72 bp | ATCTTCCATCTTCAAAGGGATCTCGGAAGGTTCTGGTaGATAGAGATCCTGACTCTCATCGGAACCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IFHLQRDLGRFW*IEILTLIGTSR Trigger: GCGGCTGGTTCCGATGAGAGTCAGGATCTCTATCAACCAGAACCTTCCGAGATCCCTTTGAAGATGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCGGGCCATCAGGCAGCTaGGAGCCGCAGAGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CCFTTNLLFIAEIRIRAIGPSGS*EPQSAS Trigger: TGAAGCACTCTGCGGCTCTCAGCTGCCTGATGGCCC...GATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAAACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTGCTGTGTCCTCCTGTaGGAGGTCCCCTTCGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSCCVLL*EVPFVG Trigger: ACCGACGAAGGGGACCTCGCACAGGAGGACACAGCA...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTCTGAGAGCCGCAGAGTaGTTCAGCAGGCCTGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERGRSCLVLFITKTQSFLLRAAE*FSRPAN Trigger: GTTGGCAGGCCTGCTGAAGCACTCTGCGGCTCTCAG...AAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTGTATCCCCACGTGGTaGGCACGCTGTCCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSCIPTW*ARCPSG Trigger: ACCTGAAGGACAGCGTGCCCACCACGTGGGGATACA...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTCCTCGCAGTCCTCTCTaGCCAAGGCAAGACTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFPRSPL*PRQDSE Trigger: TTCAGAGTCTTGCCTTGGGCAGAGAGGACTGCGAGG...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CCA 90 bp | CCAACACCAGGTAAGGGTTCGCGGTTGCAGACCCTAGTTTATTTTCTATCTGGGCTGCTATTTGGTTTCTaGACATCTCACTGGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPGKGSRLQTLVYFLSGLLFGF*TSHWNW Trigger: CCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAG...CCCAGATAGAAAATAAACTAGGGTCTGCAACCGCGAACCCTTACCTGGTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTCATTGTATCCCCACGTaGTGGGCACGCTGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSHCIPT*WARCPS Trigger: TGAAGGACAGCGTGCCCACCACGTGGGGATACAATG...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTGCACCATCACTGCTCTaGAGACCATCCAAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERGRSCLVLFITKTQSFLAPSLL*RPSKPA Trigger: AGCAGGCTTGGATGGTCTTCAGAGCAGTGATGGTGC...AAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCTTTCTGATAAACTAGCTACTCATCATATCTCTACAGGGCAGAGTCCCGCATCTTTGGCACTGTaGGAGGACCAAGACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLSDKLATHHISTGQSPASLAL*EDQDSA Trigger: TGCTGAGTCTTGGTCCTCGCACAGTGCCAAAGATGC...GGGACTCTGCCCTGTAGAGATATGATGAGTAGCTAGTTTATCAGAAAGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCCCGCAGCACCATCACTaGTCTGAAGACCATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGQKLSSIVHYKDSIFSFPQHHH*SEDHPS Trigger: GCTTGGATGGTCTTCAGAGCAGTGATGGTGCTGCGG...GAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CCA 90 bp | TTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCCCGTTTGGTGGTAGGCATCTTTaGCACTGTGCGAGGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTTNLLFIAEIRIRAIPFGGRHL*HCARTK Trigger: CTTGGTCCTCGCACAGTGCCAAAGATGCCTACCACC...AAACGGGATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTGGTGGTAGGCATCTTTaGCACTGTGCGAGGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERGRSCLVLFITKTQSFLGGRHL*HCARTK Trigger: CTTGGTCCTCGCACAGTGCCAAAGATGCCTACCACC...AAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTCTCCTGGCCACTTCTTaGAGACCTGTTCTGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFLLATS*RPVLRV Trigger: TACCCTCAGAACAGGTCTCCAAGAAGTGGCCAGGAG...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTCAACCAGTTCCTGCATaGAGGGCTGATCATGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFQPVPA*RADHGY Trigger: GTAACCATGATCAGCCCTTCATGCAGGAACTGGTTG...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCTGTCCTTCAGGTCTCTaGTGTCCTTGCAGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCFTTNLLFIAEIRIRAICPSGL*CPCSSA Trigger: AGCGCTACTGCAAGGACAGCAGAGACCTGAAGGACA...GATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAAACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATAAGACCATCCAAGCCTaGTGCCACAGTGGCCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRSCLVLFITKTQSFLSDKTIQA*CHSGRQ Trigger: TTGGCGGCCACTGTGGCAGCAGGCTTGGATGGTCTT...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | TTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCCCGTTTCAACAAAGTAGCGGATaGAAGTCTCTCCCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTTNLLFIAEIRIRAIPFQQSSG*KSLPEP Trigger: AGGCTCTGGGAGAGACTTTCATCCGCTACTTTGTTG...AAACGGGATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTGCAGAAATCATAGATaGAAGCGGACAGCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERGRSCLVLFITKTQSFLCRNHR*KRTAGR Trigger: TCTGCCTGCTGTCCGCTTTCATCTATGATTTCTGCA...AAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTAAAGGCATTATCAGCTaGGCTAATGCCAAACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSKGIIS*ANAKLW Trigger: CCAGAGTTTGGCATTAGCTCAGCTGATAATGCCTTT...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATAAACAGATCTCCATCTaGCCAGGCCTGGTAGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSCLVLFITKTQSFLSDKQISI*PGLVDE Trigger: CTCGTCTACCAGGCCTGGGCAGATGGAGATCTGTTT...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCACATCTCACTGGAATTaGCCTTGGCGATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CCFTTNLLFIAEIRIRAITSHWN*PWRFLP Trigger: GGGAAGAAATCGCCAAGGCCAATTCCAGTGAGATGT...GATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAAACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTTCTTCCCCATCCATTaGGCAAAGATGTGGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERGRSCLVLFITKTQSFLFFPIH*AKMWFG Trigger: ACCAAACCACATCTTTGCTCAATGGATGGGGAAGAA...AAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTCATGTGGCTCTTATGTaGTTCACCTCATTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFHVALM*FTSLSL Trigger: TAAGGACAATGAGGTGAATCACATAAGAGCCACATG...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCCTGCATGAAGGGCTaGTCATGGTTACTTAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFSCMKG*SWLLSN Trigger: ATTACTAAGTAACCATGATCAGCCCTTCATGCAGGA...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCTTTCACCATGACACTTaGTGTTCAAGGCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCFTTNLLFIAEIRIRAIFHHDT*CSRHSC Trigger: ACAGCTGTGCCTTGAACATCAAGTGTCATGGTGAAA...GATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAAACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTGCCTTCAGTCACATTaGCTTCATCTTTTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFCLQSH*LHLLLC Trigger: ACACAGCAAAAGATGAAGGCAATGTGACTGAAGGCA...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCGGTGACTTTTCTCCTTaGCCTTCTCAGTTTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGQKLSSIVHYKDSIFSFGDFSP*PSQFAH Trigger: ATGAGCAAACTGAGAAGGGCAAGGAGAAAAGTCACC...GAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTGATCTGGAGACACCGTaGAAATCTGTTGCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFDLETP*KSVASN Trigger: ATTTGAAGCAACAGATTTGCACGGTGTCTCCAGATC...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTCTCAGATCTGCTATTTaGTTTCTGGACATCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFLRSAI*FLDISL Trigger: CAGTGAGATGTCCAGAAACCAAATAGCAGATCTGAG...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTCGTACAAACTGGAGGTaGTTTTTGGCCATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFRTNWR*FLAISC Trigger: ACAAGAAATGGCCAAAAACCACCTCCAGTTTGTACG...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTGGACTATATCACTATTaGAGCATGTGGCTCTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSGLYHY*SMWLLC Trigger: ACATAAGAGCCACATGCTTCAATAGTGATATAGTCC...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | TTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCCCGTTTATATGGTCTTTGAATTaGTCACTTCGGGCACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTTNLLFIAEIRIRAIPFIWSLN*SLRAHQ Trigger: TTGGTGTGCCCGAAGTGATCAATTCAAAGACCATAT...AAACGGGATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATGTTTGCTCATCCTGCTaGCTTCAGTCACATTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRSCLVLFITKTQSFLSDVCSSC*LQSHCL Trigger: AAGGCAATGTGACTGAAGGCAGCAGGATGAGCAAAC...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCTTTCTGATAAACTAGCTACTCATCATATCTCTACAGGGCAGAGTCCCACCGTGCAAATCTGTTaGTTCAAATCGTACAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLSDKLATHHISTGQSPTVQIC*FKSYKL Trigger: CAGTTTGTACGATTTGAAGCAACAGATTTGCACGGT...GGGACTCTGCCCTGTAGAGATATGATGAGTAGCTAGTTTATCAGAAAGAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR GCA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATCGCCCACATCCCAGATaGTATGAGACAAAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRSCLVLFITKTQSFLSDRPHPR*YETKFL Trigger: CAGGAATTTTGTCTCATAGCATCTGGGATGTGGGCG...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTCTGCTATTTGGTTTCTaGACATCTCACTGGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERGRSCLVLFITKTQSFLLLFGF*TSHWNW Trigger: CCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAG...AAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATAAAGATGTGGTTTGGTaGCTTTTCTCCTTGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRSCLVLFITKTQSFLSDKDVVW*LFSLPF Trigger: GAAGGGCAAGGAGAAAAGTCACCAAACCACATCTTT...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | TTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCCCGTTTAAAAGATATGGTCTTTaGATTGATCACTTCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTTNLLFIAEIRIRAIPFKRYGL*IDHFGH Trigger: GTGCCCGAAGTGATCAATTCAAAGACCATATCTTTT...AAACGGGATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | TTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCCCGTTTATGAGACAAAATTCCTaGATTGCAGAATCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTTNLLFIAEIRIRAIPFMRQNS*IAESSL Trigger: GAGACTGGATTCTGCAATTCAGGAATTTTGTCTCAT...AAACGGGATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR TCA 90 bp | TTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCCCGTTTACATCCCAGATGCTATaGGACAAAATTCCTGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: FTTNLLFIAEIRIRAIPFTSQML*DKIPEL Trigger: CAATTCAGGAATTTTGTCTCATAGCATCTGGGATGT...AAACGGGATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTCAAATCGTACAAACTaGAGGTGGTTTTTGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EGQKLSSIVHYKDSIFSFSNRTN*RWFLAI Trigger: AATGGCCAAAAACCACCTCCAGTTTGTACGATTTGA...GAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CCA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATACATCTCACTGGAATTaGCCTTGGCGATTTCTTCCN | + |
|
Preference number: 4 (lower is better) Translates to: GRSCLVLFITKTQSFLSDTSHWN*PWRFLP Trigger: NGGAAGAAATCGCCAAGGCCAATTCCAGTGAGATGT...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
||
| 3UTR CAA 72 bp | AGTAATCCATGGGAGAGGGGCAGAAGCTGTCTAGTATaGTTCATTACAAAGACTCAATCTTTTCTTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SNPWERGRSCLV*FITKTQSFLSD Trigger: ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCATGGATTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| CDS-3UTR CCA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATGCTAATGCCAAACTCTaGGAGAAAACAGATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRSCLVLFITKTQSFLSDANAKL*EKTDLH Trigger: ATGGAGATCTGTTTTCTCCCAGAGTTTGGCATTAGC...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR GCA 90 bp | GAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCGAATTTATTTCCCTCTaGATCTGTTTCTTCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGQKLSSIVHYKDSIFSFEFISL*ICFFVF Trigger: GAAAACGAAGAAACAGATGCAGAGGGAAATAAATTC...GAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CCA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATGGCATGAAAACTCCGTaGATCACTTTTTCCAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GRSCLVLFITKTQSFLSDGMKTP*ITFSSI Trigger: AATACTGGAAAAAGTGATCCACGGAGTTTTCATGCC...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161773.3 |
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| CDS GCA 90 bp | TCCTTGCCCTTCTCAGTTTGCTCATCCTGCTGCCTTCAGTCACATTaGCTTCATCTTTTGCTGTGTCCTCCTGTGCGAGGTCCCCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLPFSVCSSCCLQSH*LHLLLCPPVRGPLR Trigger: ACGAAGGGGACCTCGCACAGGAGGACACAGCAAAAGATGAAGGCAATGTGACTGAAGGCAGCAGGATGAGCAAACTGAGAAGGGCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS CCA 90 bp | GAGGACCAAGACTCAGCAGAGCCAGGTTTGCTCAGATCTGCTATTTaGTTTCTGGACATCTCACTGGAATTGGCCTTGGCGATTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EDQDSAEPGLLRSAI*FLDISLELALAISS Trigger: GGAAGAAATCGCCAAGGCCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGAGTCTTGGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTGGCGCAGCTGCCTCTaGGCGATGTACCTAGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSWRSCL*AMYLGD Trigger: ATCCCCTAGGTACATCGCCAAGAGGCAGCTGCGCCA...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS GCA 90 bp | CTGTGCGGGGATGCTCTTAGATCTGGAGACACCGTGCAAATCTGTTaGTTCAAATCGTACAAACTGGAGGTGGTTTTTGGCCATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCGDALRSGDTVQIC*FKSYKLEVVFGHFL Trigger: CAAGAAATGGCCAAAAACCACCTCCAGTTTGTACGATTTGAAGCAACAGATTTGCACGGTGTCTCCAGATCTAAGAGCATCCCCGCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CAA 90 bp | TCTTTTCTTTCTGATAAACTAGCTACTCATCATATCTCTACAGGGCAGAGTCCCGCACAGCTGTTGTCATaGTATCCCCACGTGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFLSDKLATHHISTGQSPAQLLS*YPHVVG Trigger: GCCCACCACGTGGGGATACAATGACAACAGCTGTGC...GGGACTCTGCCCTGTAGAGATATGATGAGTAGCTAGTTTATCAGAAAGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CAA 90 bp | GAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCACTGGAATTGGCCTaGGCGATTTCTTCCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ERGRSCLVLFITKTQSFLSLELA*AISSPS Trigger: GGATGGGGAAGAAATCGCCAAGGCCAATTCCAGTGA...AAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CAA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTGACATCTCACTGGAATaGGCCTTGGCGATTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFDISLE*ALAISS Trigger: GGAAGAAATCGCCAAGGCCAATTCCAGTGAGATGTC...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| CDS-3UTR CAA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCAGCAGAGCCAGGTTaGCTCAGATCTGCTATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFSAEPG*LRSAIW Trigger: CCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGA...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| CDS-3UTR CAA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTTCAAGGCACAGCTGTaGTCATTGTATCCCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFFKAQL*SLYPHV Trigger: CACGTGGGGATACAATGACAACAGCTGTGCCTTGAA...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS TCA 90 bp | TCTGGCATGAGGACTATATCACTATTGAAGCATGTGGCTCTTATGTaGTTCACCTCATTGTCCTTAGGGTTCGGCATCAATTCCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: SGMRTISLLKHVALM*FTSLSLGFGINSRY Trigger: GTATCTGGAATTGATGCCGAACCCTAAGGACAATGAGGTGAATCACATAAGAGCCACATGCTTCAATAGTGATATAGTCCTCATGCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CAA 90 bp | TGCTGTTTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCTCAGCAGAGCCAGGTTaGCTCAGATCTGCTATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCFTTNLLFIAEIRIRAISAEPG*LRSAIW Trigger: CCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGA...GATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAAACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATCTTGCCCTTCTCAGTTaGCTCATCCTGCTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRSCLVLFITKTQSFLSDLALLS*LILLPS Trigger: TGAAGGCAGCAGGATGAGCAAACTGAGAAGGGCAAG...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTGCTCAGATCTGCTATTaGGTTTCTGGACATCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSAQICY*VSGHLT Trigger: AGTGAGATGTCCAGAAACCAAATAGCAGATCTGAGC...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS-3UTR CAA 90 bp | TCTTTTCTTTCTGATAAACTAGCTACTCATCATATCTCTACAGGGCAGAGTCCCGCTCAGATCTGCTATTaGGTTTCTGGACATCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SFLSDKLATHHISTGQSPAQICY*VSGHLT Trigger: AGTGAGATGTCCAGAAACCAAATAGCAGATCTGAGC...GGGACTCTGCCCTGTAGAGATATGATGAGTAGCTAGTTTATCAGAAAGAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTGATATGGTCTTTGAATaGATCACTTCGGGCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: GEGQKLSSIVHYKDSIFSDMVFE*ITSGTP Trigger: TGGTGTGCCCGAAGTGATCAATTCAAAGACCATATC...AGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CAA 90 bp | GAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCGGTAAGGGTTCGCGGTaGCAGACCCTAGTTTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: EGQKLSSIVHYKDSIFSFGKGSR*QTLVYF Trigger: AAAATAAACTAGGGTCTGCAACCGCGAACCCTTACC...GAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CAA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATCATTGCCTTCATCTTTaGCTGTGTCCTCCTGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GRSCLVLFITKTQSFLSDHCLHL*LCPPVR Trigger: TCGCACAGGAGGACACAGCAAAAGATGAAGGCAATG...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CAA 90 bp | ATGGGAGAGGGGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTCACCGTGCAAATCTGTaGCTTCAAATCGTACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: MGEGQKLSSIVHYKDSIFHRANL*LQIVQT Trigger: AGTTTGTACGATTTGAAGCAACAGATTTGCACGGTG...AAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCCCCTCTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CAA 90 bp | GGCAGAAGCTGTCTAGTATTGTTCATTACAAAGACTCAATCTTTTCTTTCTGATGAGCAAAGATGTGGTTaGGTGACTTTTCTCCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRSCLVLFITKTQSFLSDEQRCG*VTFLLA Trigger: GGCAAGGAGAAAAGTCACCAAACCACATCTTTGCTC...ATCAGAAAGAAAAGATTGAGTCTTTGTAATGAACAATACTAGACAGCTTCTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS-3UTR CAA 90 bp | TGCTGTTTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCAGGACTATATCACTATaGAAGCATGTGGCTCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: CCFTTNLLFIAEIRIRAIRTISL*KHVALM Trigger: CATAAGAGCCACATGCTTCAATAGTGATATAGTCCT...GATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAAACAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS-3UTR CAA 90 bp | TGCTGTTTCACCACAAATTTATTGTTTATAGCTGAGATCAGGATCCGAGCAATCGACAAAATTCCTGAATaGCAGAATCCAGTCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: CCFTTNLLFIAEIRIRAIDKIPE*QNPVSI Trigger: AATTGAGACTGGATTCTGCAATTCAGGAATTTTGTC...GATTGCTCGGATCCTGATCTCAGCTATAAACAATAAATTTGTGGTGAAACAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS CCA 72 bp | AGGGTTTTACCACTGGTGTCGGGTGGTAGGCATCTTTaGCACTGTGCGAGGACCAAGACTCAGCAGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVLPLVSGGRHL*HCARTKTQQSQ Trigger: CTGGCTCTGCTGAGTCTTGGTCCTCGCACAGTGCCAAAGATGCCTACCACCCGACACCAGTGGTAAAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| CDS CAA 90 bp | CTCCTTGCCCTTCTCAGTTTGCTCATCCTGCTGCCTTCAGTCACATaGCCTTCATCTTTTGCTGTGTCCTCCTGTGCGAGGTCCCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLALLSLLILLPSVT*PSSFAVSSCARSPS Trigger: CGAAGGGGACCTCGCACAGGAGGACACAGCAAAAGATGAAGGCAATGTGACTGAAGGCAGCAGGATGAGCAAACTGAGAAGGGCAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS GCA 72 bp | CACTGTGCGAGGACCAAGACTCAGCAGAGCCAGGTTTaGTCAGATCTGCTATTTGGTTTCTGGACATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HCARTKTQQSQV*SDLLFGFWTSH Trigger: GTGAGATGTCCAGAAACCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGAGTCTTGGTCCTCGCACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
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| CDS CCA 72 bp | GACTCAGCAGAGCCAGGTTTGCTCAGATCTGCTATTTaGTTTCTGGACATCTCACTGGAATTGGCCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: DSAEPGLLRSAI*FLDISLELALA Trigger: CGCCAAGGCCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS CAA 72 bp | CTTCTCAGTTTGCTCATCCTGCTGCCTTCAGTCACATaGCCTTCATCTTTTGCTGTGTCCTCCTGTGCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLSLLILLPSVT*PSSFAVSSCAR Trigger: CCTCGCACAGGAGGACACAGCAAAAGATGAAGGCAATGTGACTGAAGGCAGCAGGATGAGCAAACTGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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| CDS CAA 72 bp | GCACTGTGCGAGGACCAAGACTCAGCAGAGCCAGGTTaGCTCAGATCTGCTATTTGGTTTCTGGACATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALCEDQDSAEPG*LRSAIWFLDIS Trigger: TGAGATGTCCAGAAACCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGAGTCTTGGTCCTCGCACAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS CAA 90 bp | CGAGGACCAAGACTCAGCAGAGCCAGGTTTGCTCAGATCTGCTATTaGGTTTCTGGACATCTCACTGGAATTGGCCTTGGCGATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGPRLSRARFAQICY*VSGHLTGIGLGDFF Trigger: GAAGAAATCGCCAAGGCCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGAGTCTTGGTCCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS CAA 90 bp | GCATCTTTGGCACTGTGCGAGGACCAAGACTCAGCAGAGCCAGGTTaGCTCAGATCTGCTATTTGGTTTCTGGACATCTCACTGGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: ASLALCEDQDSAEPG*LRSAIWFLDISLEL Trigger: CAATTCCAGTGAGATGTCCAGAAACCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGAGTCTTGGTCCTCGCACAGTGCCAAAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS GCA 72 bp | TTCTCAGTTTGCTCATCCTGCTGCCTTCAGTCACATTaGCTTCATCTTTTGCTGTGTCCTCCTGTGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FSVCSSCCLQSH*LHLLLCPPVRG Trigger: ACCTCGCACAGGAGGACACAGCAAAAGATGAAGGCAATGTGACTGAAGGCAGCAGGATGAGCAAACTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS CAA 72 bp | AGACTCAGCAGAGCCAGGTTTGCTCAGATCTGCTATTaGGTTTCTGGACATCTCACTGGAATTGGCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLSRARFAQICY*VSGHLTGIGLG Trigger: GCCAAGGCCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAGATCTGAGCAAACCTGGCTCTGCTGAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062560.14 ENSMUST00000161773.3 |
||
| CDS GCA 72 bp | AACTGTGCGGGGATGCTCTTAGATCTGGAGACACCGTaGAAATCTGTTGCTTCAAATCGTACAAACTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NCAGMLLDLETP*KSVASNRTNWR Trigger: CCTCCAGTTTGTACGATTTGAAGCAACAGATTTGCACGGTGTCTCCAGATCTAAGAGCATCCCCGCACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS TCA 72 bp | ACTGGAATTGGCCTTGGCGATTTCTTCCCCATCCATTaGGCAAAGATGTGGTTTGGTGACTTTTCTCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGIGLGDFFPIH*AKMWFGDFSPC Trigger: GCAAGGAGAAAAGTCACCAAACCACATCTTTGCTCAATGGATGGGGAAGAAATCGCCAAGGCCAATTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS CCA 72 bp | TGCTCAGATCTGCTATTTGGTTTCTGGACATCTCACTaGAATTGGCCTTGGCGATTTCTTCCCCATCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: CSDLLFGFWTSH*NWPWRFLPHPL Trigger: CAATGGATGGGGAAGAAATCGCCAAGGCCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAGATCTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS GCA 72 bp | GATGCTCTTAGATCTGGAGACACCGTGCAAATCTGTTaGTTCAAATCGTACAAACTGGAGGTGGTTTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DALRSGDTVQIC*FKSYKLEVVFG Trigger: GCCAAAAACCACCTCCAGTTTGTACGATTTGAAGCAACAGATTTGCACGGTGTCTCCAGATCTAAGAGCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS CCA 72 bp | CTATTTGGTTTCTGGACATCTCACTGGAATTGGCCTTaGCGATTTCTTCCCCATCCATTGAGCAAAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LFGFWTSHWNWP*RFLPHPLSKDV Trigger: CACATCTTTGCTCAATGGATGGGGAAGAAATCGCCAAGGCCAATTCCAGTGAGATGTCCAGAAACCAAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS CCA 72 bp | GATCTGCTATTTGGTTTCTGGACATCTCACTGGAATTaGCCTTGGCGATTTCTTCCCCATCCATTGAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: DLLFGFWTSHWN*PWRFLPHPLSK Trigger: TTTGCTCAATGGATGGGGAAGAAATCGCCAAGGCCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS CAA 72 bp | AGATCTGCTATTTGGTTTCTGGACATCTCACTGGAATaGGCCTTGGCGATTTCTTCCCCATCCATTGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RSAIWFLDISLE*ALAISSPSIEQ Trigger: TTGCTCAATGGATGGGGAAGAAATCGCCAAGGCCAATTCCAGTGAGATGTCCAGAAACCAAATAGCAGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS TCA 72 bp | AGGACTATATCACTATTGAAGCATGTGGCTCTTATGTaGTTCACCTCATTGTCCTTAGGGTTCGGCATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RTISLLKHVALM*FTSLSLGFGIN Trigger: ATTGATGCCGAACCCTAAGGACAATGAGGTGAATCACATAAGAGCCACATGCTTCAATAGTGATATAGTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS CCA 72 bp | ACACCGTGCAAATCTGTTGCTTCAAATCGTACAAACTaGAGGTGGTTTTTGGCCATTTCTTGTTTAATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TPCKSVASNRTN*RWFLAISCLMC Trigger: ACACATTAAACAAGAAATGGCCAAAAACCACCTCCAGTTTGTACGATTTGAAGCAACAGATTTGCACGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
||
| CDS CCA 72 bp | TGCAAATCTGTTGCTTCAAATCGTACAAACTGGAGGTaGTTTTTGGCCATTTCTTGTTTAATGTGTTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: CKSVASNRTNWR*FLAISCLMCFI Trigger: AATGAAACACATTAAACAAGAAATGGCCAAAAACCACCTCCAGTTTGTACGATTTGAAGCAACAGATTTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062560.14 |
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