Pregenerated sensors for LGR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020140Ensembl transcript IDs: ENSMUST00000020350.15, ENSMUST00000172806.8, ENSMUST00000173740.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGCACAGCCATTTGAGAGAGTGATGAACATCTTGCCAGAAGCATaGTCCTACTCAGAAATAAATACAGATCCGACAATTTCATACTGT | + |
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Preference number: 1 (lower is better) Translates to: NAQPFERVMNILPEA*SYSEINTDPTISYC Trigger: ACAGTATGAAATTGTCGGATCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTCTCAAATGGCTGTGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CCA 90 bp | CTACGTATTTACATGTGTTATGTACAGTTAATGCATTGGGGAAATTaGCAGAGAAACAATATGTCTGGGAGAATAGGCTACTGTACATGG | + |
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Preference number: 1 (lower is better) Translates to: LRIYMCYVQLMHWGN*QRNNMSGRIGYCTW Trigger: CCATGTACAGTAGCCTATTCTCCCAGACATATTGTTTCTCTGCCAATTTCCCCAATGCATTAACTGTACATAACACATGTAAATACGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CCA 90 bp | TTACAAGCACTACGTATTTACATGTGTTATGTACAGTTAATGCATTaGGGAAATTGGCAGAGAAACAATATGTCTGGGAGAATAGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: LQALRIYMCYVQLMH*GNWQRNNMSGRIGY Trigger: GTAGCCTATTCTCCCAGACATATTGTTTCTCTGCCAATTTCCCCAATGCATTAACTGTACATAACACATGTAAATACGTAGTGCTTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR TCA 90 bp | AAGTTAAGAATAAACCTTTCGCTCTCCAGATTTAACAATTTGTCTTaGAACATCGAACACCTGCGTGAATATGGACTAAGCAGAGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: KLRINLSLSRFNNLS*NIEHLREYGLSREV Trigger: TACTTCTCTGCTTAGTCCATATTCACGCAGGTGTTCGATGTTTCAAGACAAATTGTTAAATCTGGAGAGCGAAAGGTTTATTCTTAACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR-3UTR GCA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAACAGAAGAGACTACAATaGGAAGAGCATTTCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQQKRLQ*EEHFRL Trigger: CAGCCTGAAATGCTCTTCGCATTGTAGTCTCTTCTG...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGAGTCAGTCCAAGAAACTaGTGTCTTGGAAGGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ESDEHLARSMLLLRNKYRVSPRN*CLGRSL Trigger: CAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGAC...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATCCGACAATTTCATACTGAAGAAACTGGTGTCTTaGAAGGAGCCTGTCCGTCAA | + |
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Preference number: 2 (lower is better) Translates to: ARSMLLLRNKYRSDNFILKKLVS*KEPVRQ Trigger: TTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTT...CAGTATGAAATTGTCGGATCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CAA 90 bp | TTGAGCACTGAAAATGCACAGCCATTTGAGAGAGTGATGAACATCTaGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATCCGACA | + |
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Preference number: 2 (lower is better) Translates to: LSTENAQPFERVMNI*PEACSYSEINTDPT Trigger: TGTCGGATCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTCTCAAATGGCTGTGCATTTTCAGTGCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR-3UTR GCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCAAGAGCATTTCAGGCTaGTTTTCTCATCTGGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: THNHLCVAIKTKLCGQHSKSISG*FSHLGS Trigger: TGAACCCAGATGAGAAAAGCAGCCTGAAATGCTCTT...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGAGCTGCTTTTCTCATCTaGGTTCACCTAAGTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: ESDEHLARSMLLLRNKYRAAFLI*VHLSDL Trigger: CAAGTCACTTAGGTGAACCCAGATGAGAAAAGCAGC...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR-3UTR GCA 90 bp | GCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATCCGACAATTTCATACTGTTAATGATGCTCTCCTaGTCTAAGGCACCACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: ARSMLLLRNKYRSDNFILLMMLS*SKAPLF Trigger: AAACAGTGGTGCCTTAGAGCAGGAGAGCATCATTAA...CAGTATGAAATTGTCGGATCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CAA 90 bp | ACTACGTATTTACATGTGTTATGTACAGTTAATGCATTGGGGAAATaGGCAGAGAAACAATATGTCTGGGAGAATAGGCTACTGTACATG | + |
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Preference number: 2 (lower is better) Translates to: TTYLHVLCTVNALGK*AEKQYVWENRLLYM Trigger: CATGTACAGTAGCCTATTCTCCCAGACATATTGTTTCTCTGCCAATTTCCCCAATGCATTAACTGTACATAACACATGTAAATACGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CAA 90 bp | TTTACAAGCACTACGTATTTACATGTGTTATGTACAGTTAATGCATaGGGGAAATTGGCAGAGAAACAATATGTCTGGGAGAATAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: FTSTTYLHVLCTVNA*GKLAEKQYVWENRL Trigger: TAGCCTATTCTCCCAGACATATTGTTTCTCTGCCAATTTCCCCAATGCATTAACTGTACATAACACATGTAAATACGTAGTGCTTGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGCGCGCGCCGC | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTQKSTCL*LPSAGIKGARR Trigger: GCGGCGCGCGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR TCA 72 bp | CTAAATGCACCGAATCCTACTTTGCCCAGTTTCTGTTaGGTCCGAAGTGTGGAGAGGCATTGTTGCTCGAGC | + |
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Preference number: 3 (lower is better) Translates to: LNAPNPTLPSFC*VRSVERHCCSS Trigger: GCTCGAGCAACAATGCCTCTCCACACTTCGGACTCAACAGAAACTGGGCAAAGTAGGATTCGGTGCATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR GCA 72 bp | TGGGAGACTATGCTGGTGAGTCAGAAGAGACTACAATaGGAAGAGCATTTCAGGCTGCTTTTCTCATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: WETMLVSQKRLQ*EEHFRLLFSSG Trigger: CCCAGATGAGAAAAGCAGCCTGAAATGCTCTTCGCATTGTAGTCTCTTCTGACTCACCAGCATAGTCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR-3UTR CAA 90 bp | GAAGTGTGGAGAGGCATTGTTGCTCGAGCTACCAGAGATGGGTGTGTGAAGTTAGTTCACCTAAGTGACTaGATGGCTTTCCTTCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: EVWRGIVARATRDGCVKLVHLSD*MAFLLS Trigger: GCTAAGAAGGAAAGCCATCAAGTCACTTAGGTGAAC...TAACTTCACACACCCATCTCTGGTAGCTCGAGCAACAATGCCTCTCCACACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CCA 72 bp | ACAATGCGAAGAGCATTTCAGGCTGCTTTTCTCATCTaGGTTCACCTAAGTGACTTGATGGCTTTCCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: TMRRAFQAAFLI*VHLSDLMAFLL Trigger: AAGAAGGAAAGCCATCAAGTCACTTAGGTGAACCCAGATGAGAAAAGCAGCCTGAAATGCTCTTCGCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR TCA 72 bp | ATAAACCTTTCGCTCTCCAGATTTAACAATTTGTCTTaGAACATCGAACACCTGCGTGAATATGGACTAAGC | + |
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Preference number: 3 (lower is better) Translates to: INLSLSRFNNLS*NIEHLREYGLS Trigger: GCTTAGTCCATATTCACGCAGGTGTTCGATGTTTCAAGACAAATTGTTAAATCTGGAGAGCGAAAGGTTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CCA 72 bp | TACATGTGTTATGTACAGTTAATGCATTGGGGAAATTaGCAGAGAAACAATATGTCTGGGAGAATAGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: YMCYVQLMHWGN*QRNNMSGRIGY Trigger: GTAGCCTATTCTCCCAGACATATTGTTTCTCTGCCAATTTCCCCAATGCATTAACTGTACATAACACATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR TCA 72 bp | TTTAAACAAGGAATTTGTGGATTTAAATACACCCATTaGGTCATCCAACGAGTCTTCTCACTATGGGAGACT | + |
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Preference number: 3 (lower is better) Translates to: FKQGICGFKYTH*VIQRVFSLWET Trigger: AGTCTCCCATAGTGAGAAGACTCGTTGGATGACTCAATGGGTGTATTTAAATCCACAAATTCCTTGTTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | GAAGTGTGGAGAGGCATTGTTGCTCGAGCTACCAGAGATGGGTGTGTGAAGTTACCGAGCAGTCCACCCTaGGCAGCATCCTGCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: EVWRGIVARATRDGCVKLPSSPP*AASCHP Trigger: TGGATGGCAGGATGCTGCTCAGGGTGGACTGCTCGG...TAACTTCACACACCCATCTCTGGTAGCTCGAGCAACAATGCCTCTCCACACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR GCA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAACCATGTAGCCCGTGGTaGTGGGCTCCCCAAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQPCSPW*WAPQRA Trigger: TGCCCTTTGGGGAGCCCAGCACCACGGGCTACATGG...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | TCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAAAAGCGCTCGCTCCGGTATTaGCCTGATGTTGTTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SVQETGVLEGACPSKGKKRSLRY*PDVVAV Trigger: CACAGCAACAACATCAGGTCAATACCGGAGCGAGCG...CTTTTTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGAGGTGCTCACAGGGCTTaGAGGGACCTGGGGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ESDEHLARSMLLLRNKYRGAHRA*RDLGKA Trigger: CGCCTTCCCCAGGTCCCTTCAAGCCCTGTGAGCACC...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR GCA 90 bp | AGTGGACTTAACGCCCTGCGTTTGAGCACTGAAAATGCACAGCCATTTGAGAGAACCTCGTTCCAGCGCTaGCAGAGTGAGCAGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SGLNALRLSTENAQPFERTSFQR*QSEQED Trigger: ATCTTCCTGCTCACTCTGGCAGCGCTGGAACGAGGT...TCTCTCAAATGGCTGTGCATTTTCAGTGCTCAAACGCAGGGCGTTAAGTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | GAAGTGTGGAGAGGCATTGTTGCTCGAGCTACCAGAGATGGGTGTGTGAAGTTATCAGACTCTCCAGGGTaGCAGTTCCTGTCAAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: EVWRGIVARATRDGCVKLSDSPG*QFLSSE Trigger: CTCACTTGACAGGAACTGCCACCCTGGAGAGTCTGA...TAACTTCACACACCCATCTCTGGTAGCTCGAGCAACAATGCCTCTCCACACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCTGTAGCCCGTGGTGCTaGGCTCCCCAAAGGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: THNHLCVAIKTKLCGQHSCSPWC*APQRAR Trigger: CCTTGCCCTTTGGGGAGCCCAGCACCACGGGCTACA...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGACCACCATGTAGCCCGTaGTGCTGGGCTCCCCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: ESDEHLARSMLLLRNKYRPPCSP*CWAPQR Trigger: CCTTTGGGGAGCCCAGCACCACGGGCTACATGGTGG...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | TCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAAAAGGACAGCTTTCAGTCATaGGGTAAGCTGGTGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: SVQETGVLEGACPSKGKKDSFQS*GKLVMP Trigger: GGGCATCACCAGCTTACCCCATGACTGAAAGCTGTC...CTTTTTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CAA 72 bp | GCTAAATGCACCGAATCCTACTTTGCCCAGTTTCTGTaGAGTCCGAAGTGTGGAGAGGCATTGTTGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: AKCTESYFAQFL*SPKCGEALLLE Trigger: CTCGAGCAACAATGCCTCTCCACACTTCGGACTCAACAGAAACTGGGCAAAGTAGGATTCGGTGCATTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAAGACTGGCGGGTAGCTaGCTGATGTTGTTCATACTG | + |
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Preference number: 4 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQRLAGS*LMLFIL Trigger: CAGTATGAACAACATCAGTCAGCTACCCGCCAGTCT...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | GCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATCCGACAATTTCATACTGGGCTGTGAAGGCCCGTaGACGCTCCCTTGGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: ARSMLLLRNKYRSDNFILGCEGP*TLPWEC Trigger: ACATTCCCAAGGGAGCGTTCACGGGCCTTCACAGCC...CAGTATGAAATTGTCGGATCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | AGTGGACTTAACGCCCTGCGTTTGAGCACTGAAAATGCACAGCCATTTGAGAGAGCTCCGGTATTGACCTaGTGTTGTTGCTGTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: SGLNALRLSTENAQPFERAPVLT*CCCCGI Trigger: GATTCCACAGCAACAACATCAGGTCAATACCGGAGC...TCTCTCAAATGGCTGTGCATTTTCAGTGCTCAAACGCAGGGCGTTAAGTCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR GCA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATCATCTAGCCACAGGTaGCTCAGGGAGTGCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ESDEHLARSMLLLRNKYRSSSHR*LRECRP Trigger: CGGCCTGCACTCCCTGAGGCACCTGTGGCTAGATGA...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | GAAGTGTGGAGAGGCATTGTTGCTCGAGCTACCAGAGATGGGTGTGTGAAGTTATGGGACAAATGCAACTaGAGAGAGATGACAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: EVWRGIVARATRDGCVKLWDKCN*REMTAF Trigger: GAAAGCTGTCATCTCTCTTCAGTTGCATTTGTCCCA...TAACTTCACACACCCATCTCTGGTAGCTCGAGCAACAATGCCTCTCCACACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | AGTGGACTTAACGCCCTGCGTTTGAGCACTGAAAATGCACAGCCATTTGAGAGAAAACTTCTGAAAGCCTaGACAGGGACGTCTGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SGLNALRLSTENAQPFERKLLKA*TGTSVR Trigger: TCTCACAGACGTCCCTGTCCAGGCTTTCAGAAGTTT...TCTCTCAAATGGCTGTGCATTTTCAGTGCTCAAACGCAGGGCGTTAAGTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCGCAGAACCACGAGGCTaGAGAGGTTTCCAAAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: THNHLCVAIKTKLCGQHSAEPRG*RGFQRR Trigger: ACGCCTTTGGAAACCTCTCCAGCCTCGTGGTTCTGC...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCGGGCTGATAAACTTCTaGAAGCCTGGACAGGGACGT | + |
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Preference number: 4 (lower is better) Translates to: THNHLCVAIKTKLCGQHSGLINF*KPGQGR Trigger: ACGTCCCTGTCCAGGCTTTCAGAAGTTTATCAGCCC...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAGCAGTTCCTGTCAAGTaGGGAAATTCAGTAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQAVPVK*GNSVMC Trigger: GCACATTACTGAATTTCCTCACTTGACAGGAACTGC...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR GCA 90 bp | GCACCACTGTTTCCACACCAATTTAGAGATGTTTGCTTGGGTTTTAAGGTAGGTCGGGGCAGTAAAGGATaGAGTTGGCGAAGAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: APLFPHQFRDVCLGFKVGRGSKG*SWRRAT Trigger: TGTTGCTCTTCGCCAACTGCATCCTTTACTGCCCCG...ACCTACCTTAAAACCCAAGCAAACATCTCTAAATTGGTGTGGAAACAGTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | GCACCACTGTTTCCACACCAATTTAGAGATGTTTGCTTGGGTTTTAAGGTAGGTTCAGGGCCAAGGTCATaGCTTGCAGGGCTGATAAAC | + |
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Preference number: 4 (lower is better) Translates to: APLFPHQFRDVCLGFKVGSGPRS*LAGLIN Trigger: GTTTATCAGCCCTGCAAGCCATGACCTTGGCCCTGA...ACCTACCTTAAAACCCAAGCAAACATCTCTAAATTGGTGTGGAAACAGTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | GCACCACTGTTTCCACACCAATTTAGAGATGTTTGCTTGGGTTTTAAGGTAGGTAGGAAGCCAACGATTTaGCAGCCGATTCCGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: APLFPHQFRDVCLGFKVGRKPTI*QPIPSS Trigger: GGAAGACGGAATCGGCTGCCAAATCGTTGGCTTCCT...ACCTACCTTAAAACCCAAGCAAACATCTCTAAATTGGTGTGGAAACAGTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGAAGGGGATTGTGGCAATaGTCAGGGCCAACAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: ESDEHLARSMLLLRNKYRRGLWQ*SGPTGH Trigger: GTGTCCTGTTGGCCCTGACCATTGCCACAATCCCCT...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CAA 72 bp | TGTGTGAAGTTACACAGTGGACTTAACGCCCTGCGTTaGAGCACTGAAAATGCACAGCCATTTGAGAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: CVKLHSGLNALR*STENAQPFERV Trigger: CACTCTCTCAAATGGCTGTGCATTTTCAGTGCTCAAACGCAGGGCGTTAAGTCCACTGTGTAACTTCACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | TCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAAAAGAGTTCAGGCAAATGCTaGAAAGCAGATACTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: SVQETGVLEGACPSKGKKSSGKC*KADTPT Trigger: TGTTGGAGTATCTGCTTTTCAGCATTTGCCTGAACT...CTTTTTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR GCA 90 bp | TCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAAAAGGGAAATTCAGTAATGTaGGAGGCACCATTCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVQETGVLEGACPSKGKKGNSVM*EAPFKV Trigger: GACTTTGAATGGTGCCTCGCACATTACTGAATTTCC...CTTTTTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR GCA 90 bp | AACCTTGAAACCAGTTTTATCTCAGCAAGGGAGAATGCACTGGATACTTATCTAACGGCCAAAAGTGAATaGATCCACGGCAGCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLETSFISARENALDTYLTAKSE*IHGSQH Trigger: GTGCTGGCTGCCGTGGATGCATTCACTTTTGGCCGT...TAGATAAGTATCCAGTGCATTCTCCCTTGCTGAGATAAAACTGGTTTCAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR CCA 90 bp | GCACCACTGTTTCCACACCAATTTAGAGATGTTTGCTTGGGTTTTAAGGTAGGTGGAACCTGTCTCAGCTaGTTGTTCTGCAGCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: APLFPHQFRDVCLGFKVGGTCLS*LFCSIS Trigger: GCTTATGCTGCAGAACAACCAGCTGAGACAGGTTCC...ACCTACCTTAAAACCCAAGCAAACATCTCTAAATTGGTGTGGAAACAGTGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR TCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCGGTTGGAGAGTGTCTTaGTTGCAGTGGGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: THNHLCVAIKTKLCGQHSGWRVS*LQWGIH Trigger: ATGAATTCCCCACTGCAATCAAGACACTCTCCAACC...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR GCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCCTCAGCTGGTTGTTCTaGAGCATAAGCACTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THNHLCVAIKTKLCGQHSLSWLF*SISTLR Trigger: CCTCAAAGTGCTTATGCTGCAGAACAACCAGCTGAG...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR GCA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAATCCAAAGGCGTAGTCTaGTATGTGGTGTATTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQSKGVV*YVVYFV Trigger: AACAAAATACACCACATAGCAGACTACGCCTTTGGA...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAAAAGCTCCAACAAATTGGATaGGGTTGTCATAGAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVQETGVLEGACPSKGKKLQQIG*GCHRSV Trigger: TACACTTCTATGACAACCCCATCCAATTTGTTGGAG...CTTTTTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR CCA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAACAATTAGCAGCTTTATaGAAGAGATGTACAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQQLAAL*KRCTEE Trigger: CTCCTCTGTACATCTCTTCCATAAAGCTGCTAATTG...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR CCA 90 bp | AGTGGACTTAACGCCCTGCGTTTGAGCACTGAAAATGCACAGCCATTTGAGAGAATTCGGAAGCAAAAATaGACAGGAAGCCAACGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLNALRLSTENAQPFERIRKQK*TGSQRF Trigger: AAATCGTTGGCTTCCTGTCCATTTTTGCTTCCGAAT...TCTCTCAAATGGCTGTGCATTTTCAGTGCTCAAACGCAGGGCGTTAAGTCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR CCA 90 bp | TATATATGGATTAAAAATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGCTAGCAAGGGGATTGTaGCAATGGTCAGGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: YIWIKNVSPRNWCLGRSLLARGL*QWSGPT Trigger: TGTTGGCCCTGACCATTGCCACAATCCCCTTGCTAG...CAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATTTTTAATCCATATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR TCA 90 bp | TATATATGGATTAAAAATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGGCAACTGAAGAGAGATaGCAGCTTTCAGTCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YIWIKNVSPRNWCLGRSLATEER*QLSVMG Trigger: CCCCATGACTGAAAGCTGTCATCTCTCTTCAGTTGC...CAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATTTTTAATCCATATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR GCA 90 bp | TATATATGGATTAAAAATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGGAGCTCTGGGAAGTTTaGAGATGGTATCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YIWIKNVSPRNWCLGRSLELWEV*RWYQAL Trigger: CAGAGCCTGATACCATCTGCAAACTTCCCAGAGCTC...CAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATTTTTAATCCATATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR GCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCCTCCTTTCTCCAAACTaGAGTAGAGCTTTGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: THNHLCVAIKTKLCGQHSLLSPN*SRALCR Trigger: CCTACACAAAGCTCTACTGCAGTTTGGAGAAAGGAG...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAATGCACTGGATACTTATCTATATAACCCAGTGTCTTTTTGTTGTTGTGCTGAAACAGCTGGGTaGCACGTAGCTGATGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RENALDTYLYNPVSFCCCAETAG*HVADVV Trigger: AACCACATCAGCTACGTGCCACCCAGCTGTTTCAGC...ACAACAACAAAAAGACACTGGGTTATATAGATAAGTATCCAGTGCATTCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | GCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATCCGACAATTTCATACTGACTTCGAAGAGCACTTaGCAGAAAAACCTCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSMLLLRNKYRSDNFILTSKST*QKNLVP Trigger: TGGAACGAGGTTTTTCTGTCAAGTGCTCTTCGAAGT...CAGTATGAAATTGTCGGATCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAATGCACTGGATACTTATCTATATAACCCAGTGTCTTTTTGTTGTTGTGCCAAGGTCATGGCTTaGAGGGCTGATAAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RENALDTYLYNPVSFCCCAKVMA*RADKLL Trigger: CAGAAGTTTATCAGCCCTGCAAGCCATGACCTTGGC...ACAACAACAAAAAGACACTGGGTTATATAGATAAGTATCCAGTGCATTCTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGAAAAGTCTCCAGGCTGTaGAGTCCATCAAAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESDEHLARSMLLLRNKYRKVSRL*SPSKHF Trigger: GAAATGCTTTGATGGACTCCACAGCCTGGAGACTTT...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCAGGACGACAGGAGATTaGATGATAGGTCCAACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: THNHLCVAIKTKLCGQHSRTTGD*MIGPTL Trigger: TAAAGTTGGACCTATCATCCAATCTCCTGTCGTCCT...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | GCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATCCGACAATTTCATACTGAGTAAAGGATGCAGTTaGCGAAGAGCAACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARSMLLLRNKYRSDNFILSKGCS*RRATEQ Trigger: TTGCTCTGTTGCTCTTCGCCAACTGCATCCTTTACT...CAGTATGAAATTGTCGGATCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | AACCTTGAAACCAGTTTTATCTCAGCAAGGGAGAATGCACTGGATACTTATCTACTCAGGTCAATTTTCTaGAGTTTTTGGCAGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NLETSFISARENALDTYLLRSIF*SFWQPD Trigger: GTCAGGCTGCCAAAAACTTCAGAAAATTGACCTGAG...TAGATAAGTATCCAGTGCATTCTCCCTTGCTGAGATAAAACTGGTTTCAAGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR TCA 90 bp | GCACCACTGTTTCCACACCAATTTAGAGATGTTTGCTTGGGTTTTAAGGTAGGTAGGTTAAACAACTGCTaGAAAGTGCTGCCCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: APLFPHQFRDVCLGFKVGRLNNC*KVLPLI Trigger: AATTAAGGGCAGCACTTTTCAGCAGTTGTTTAACCT...ACCTACCTTAAAACCCAAGCAAACATCTCTAAATTGGTGTGGAAACAGTGGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | AACCTTGAAACCAGTTTTATCTCAGCAAGGGAGAATGCACTGGATACTTATCTAGACAATGTAGAGAAGTaGGTTGAGACAGGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLETSFISARENALDTYLDNVEK*VETGRK Trigger: CTTCCTTCCTGTCTCAACCCACTTCTCTACATTGTC...TAGATAAGTATCCAGTGCATTCTCCCTTGCTGAGATAAAACTGGTTTCAAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATGGATTCTATTATTATaGAGATGCAGAACCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESDEHLARSMLLLRNKYRWILLL*RCRTTR Trigger: CCTCGTGGTTCTGCATCTCCATAATAATAGAATCCA...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | GCACCACTGTTTCCACACCAATTTAGAGATGTTTGCTTGGGTTTTAAGGTAGGTTTCTTTCCCAGGGAGTaGATTCTATTATTATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: APLFPHQFRDVCLGFKVGFFPRE*ILLLWR Trigger: TCTCCATAATAATAGAATCCACTCCCTGGGAAAGAA...ACCTACCTTAAAACCCAAGCAAACATCTCTAAATTGGTGTGGAAACAGTGGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCACACTGGTAAGCAGATaGCATTTCTATAATCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: THNHLCVAIKTKLCGQHSTLVSR*HFYNLE Trigger: CTCAAGATTATAGAAATGCCATCTGCTTACCAGTGT...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CAA 72 bp | GAAAATGCACAGCCATTTGAGAGAGTGATGAACATCTaGCCAGAAGCATGCTCCTACTCAGAAATAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: ENAQPFERVMNI*PEACSYSEINT Trigger: TGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTCTCAAATGGCTGTGCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CAA 72 bp | ACTAAGCAGAGAAGTAATGAACTTCATATCAAGTGGTaGATCCGGAAACAAGACACAGCTAAAACCAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TKQRSNELHIKW*IRKQDTAKTKL Trigger: TAGCTTGGTTTTAGCTGTGTCTTGTTTCCGGATCAACCACTTGATATGAAGTTCATTACTTCTCTGCTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| 3UTR CAA 72 bp | ACTACGTATTTACATGTGTTATGTACAGTTAATGCATaGGGGAAATTGGCAGAGAAACAATATGTCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTYLHVLCTVNA*GKLAEKQYVWE Trigger: CTCCCAGACATATTGTTTCTCTGCCAATTTCCCCAATGCATTAACTGTACATAACACATGTAAATACGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CCA 90 bp | AGGGAGAATGCACTGGATACTTATCTATATAACCCAGTGTCTTTTTGTTGTTGTTATAATCTTGAGCTCTaGGAAGTTTGCAGATGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RENALDTYLYNPVSFCCCYNLEL*EVCRWY Trigger: ATACCATCTGCAAACTTCCCAGAGCTCAAGATTATA...ACAACAACAAAAAGACACTGGGTTATATAGATAAGTATCCAGTGCATTCTCCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS GCA 90 bp | CGCGGTATCGCATCTGGTCCCGGTGAGCTGCCGGCGGCCACCAACTaGAGCAGCGCCAGCAAGGACAGGAGCATGTGGACGCAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGIASGPGELPAATN*SSASKDRSMWTQEV Trigger: CACCTCCTGCGTCCACATGCTCCTGTCCTTGCTGGCGCTGCTGCAGTTGGTGGCCGCCGGCAGCTCACCGGGACCAGATGCGATACCGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS TCA 90 bp | GGTTGGAGGGCAGCTCCGAGAGCCCCAGGTCCGAGCAGTCCACCCTaGGCAGCATCCTGCCATCCAGCTCACAGTGACAGTGTGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GWRAAPRAPGPSSPP*AASCHPAHSDSVMG Trigger: GCCCATCACACTGTCACTGTGAGCTGGATGGCAGGATGCTGCTCAGGGTGGACTGCTCGGACCTGGGGCTCTCGGAGCTGCCCTCCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS TCA 90 bp | CCAACGATTTGGCAGCCGATTCCGTCTTCCCACCACGCACCGTGCTaGGCAAAACGGCCAAAAGTGAATGCATCCACGGCAGCCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PTIWQPIPSSHHAPC*AKRPKVNASTAAST Trigger: TGTGCTGGCTGCCGTGGATGCATTCACTTTTGGCCGTTTTGCTCAGCACGGTGCGTGGTGGGAAGACGGAATCGGCTGCCAAATCGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CCA 90 bp | CGGTCAAAGCCACCAAGGCATTGCAGGAAAGCGCCAGTACTGCCGTaGTCCACACCCCGATTCGGATCAGCCAGCTACCAAATAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSKPPRHCRKAPVLP*STPRFGSASYQIGA Trigger: AGCACCTATTTGGTAGCTGGCTGATCCGAATCGGGGTGTGGACCACGGCAGTACTGGCGCTTTCCTGCAATGCCTTGGTGGCTTTGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS-3UTR CAA 90 bp | GAAGTGTGGAGAGGCATTGTTGCTCGAGCTACCAGAGATGGGTGTGTGAAGTTAGTGAAGACGCTGAGGTaGGAGGGCAGCTCCGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVWRGIVARATRDGCVKLVKTLR*EGSSES Trigger: GCTCTCGGAGCTGCCCTCCAACCTCAGCGTCTTCAC...TAACTTCACACACCCATCTCTGGTAGCTCGAGCAACAATGCCTCTCCACACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS TCA 90 bp | TCACAGGGCTTGAAGGGACCTGGGGAAGGCGAGCACTGCACCGAGTaGAGGGCCTTCAGGTCTTCCTCAAAGTCAAGTAGGAAATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQGLKGPGEGEHCTE*RAFRSSSKSSRKSS Trigger: TGAAGATTTCCTACTTGACTTTGAGGAAGACCTGAAGGCCCTTCACTCGGTGCAGTGCTCGCCTTCCCCAGGTCCCTTCAAGCCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CCA 90 bp | AGGGCCAAGGTCATGGCTTGCAGGGCTGATAAACTTCTGAAAGCCTaGACAGGGACGTCTGTGAGAGCATTGTCATCTAGCCACAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RAKVMACRADKLLKA*TGTSVRALSSSHRC Trigger: GCACCTGTGGCTAGATGACAATGCTCTCACAGACGTCCCTGTCCAGGCTTTCAGAAGTTTATCAGCCCTGCAAGCCATGACCTTGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 |
||
| CDS-3UTR CAA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAACTCCTAGCAAGGGGATaGTGGCAATGGTCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQLLARG*WQWSGP Trigger: TGGCCCTGACCATTGCCACAATCCCCTTGCTAGGAG...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS TCA 90 bp | ACCTGTCTCAGCTGGTTGTTCTGCAGCATAAGCACTTTGAGGCTGTaGAGGCCCGTGAACGCTCCCTTGGGAATGTGTGTCAAAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: TCLSWLFCSISTLRL*RPVNAPLGMCVKAF Trigger: AAATGCTTTGACACACATTCCCAAGGGAGCGTTCACGGGCCTTCACAGCCTCAAAGTGCTTATGCTGCAGAACAACCAGCTGAGACAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CCA 90 bp | GACATGGGACAAATGCAACTGAAGAGAGATGACAGCTTTCAGTCATaGGGTAAGCTGGTGATGCCCCGGAAGTGGAAGGCAAGTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: DMGQMQLKRDDSFQS*GKLVMPRKWKASHR Trigger: CCTATGACTTGCCTTCCACTTCCGGGGCATCACCAGCTTACCCCATGACTGAAAGCTGTCATCTCTCTTCAGTTGCATTTGTCCCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
||
| CDS-3UTR CAA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAGTGATAAGAGAAGGGTaGCCTACGAACGCTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQVIREG*PTNARS Trigger: GGAGCGAGCGTTCGTAGGCAACCCTTCTCTTATCAC...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS CCA 90 bp | AAGAGGAGAAGGATAAGAAAGCCACGGGGCAGTAAAGGATGCAGTTaGCGAAGAGCAACAGAGCAATGTGCTTCACCATCGAACAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRRRIRKPRGSKGCS*RRATEQCASPSNNP Trigger: GGGATTGTTCGATGGTGAAGCACATTGCTCTGTTGCTCTTCGCCAACTGCATCCTTTACTGCCCCGTGGCTTTCTTATCCTTCTCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS-3UTR CAA 90 bp | AATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAAGGAAACAGAGAGAGTaGAGCAACACGAGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NVSPRNWCLGRSLSVKRQRKQRE*SNTRAT Trigger: GGTGGCTCTCGTGTTGCTCAACTCTCTCTGTTTCCT...TTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
||
| CDS GCA 90 bp | TTAGCAAAGAGGAGAAGGATAAGAAAGCCACGGGGCAGTAAAGGATaGAGTTGGCGAAGAGCAACAGAGCAATGTGCTTCACCATCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LAKRRRIRKPRGSKG*SWRRATEQCASPSN Trigger: GTTCGATGGTGAAGCACATTGCTCTGTTGCTCTTCGCCAACTGCATCCTTTACTGCCCCGTGGCTTTCTTATCCTTCTCCTCTTTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
||
| CDS CCA 90 bp | TTGCCTACGAACGCTCGCTCCGGTATTGACCTGATGTTGTTGCTGTaGAATCCTAGTTCCTTAAGGTTGGAGAGTGTCTTGATTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPTNARSGIDLMLLL*NPSSLRLESVLIAV Trigger: CACTGCAATCAAGACACTCTCCAACCTTAAGGAACTAGGATTCCACAGCAACAACATCAGGTCAATACCGGAGCGAGCGTTCGTAGGCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000173740.2 |
||
| CDS TCA 90 bp | GCTCCAGTTAAAGTCAGACTCTCCAGGGTGGCAGTTCCTGTCAAGTaGGGAAATTCAGTAATGTGCGAGGCACCATTCAAAGTCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: APVKVRLSRVAVPVK*GNSVMCEAPFKVSV Trigger: AACACTGACTTTGAATGGTGCCTCGCACATTACTGAATTTCCTCACTTGACAGGAACTGCCACCCTGGAGAGTCTGACTTTAACTGGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS GCA 90 bp | TTCAAACTTCGAAGAGCACTTGACAGAAAAACCTCGTTCCAGCGCTaGCAGAGTGAGCAGGAAGATCGACGATTCGGAAGCAAAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FKLRRALDRKTSFQR*QSEQEDRRFGSKNG Trigger: TCCATTTTTGCTTCCGAATCGTCGATCTTCCTGCTCACTCTGGCAGCGCTGGAACGAGGTTTTTCTGTCAAGTGCTCTTCGAAGTTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS-3UTR CAA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCCCCGTGAACGCTCCCTaGGGAATGTGTGTCAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: THNHLCVAIKTKLCGQHSPVNAP*GMCVKA Trigger: TGCTTTGACACACATTCCCAAGGGAGCGTTCACGGG...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | AGTGGACTTAACGCCCTGCGTTTGAGCACTGAAAATGCACAGCCATTTGAGAGAGCTATGTGGTGTATTTaGTTCAGGGCCAAGGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SGLNALRLSTENAQPFERAMWCI*FRAKVM Trigger: CATGACCTTGGCCCTGAACAAAATACACCACATAGC...TCTCTCAAATGGCTGTGCATTTTCAGTGCTCAAACGCAGGGCGTTAAGTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS TCA 90 bp | GATGGTATCAGGCTCTGTAAGGCTCGGTTCCCTGTTAATTTTAAGTaGGTTAAACCATGTAACCCAGTCACAGGGAAGGACGACAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DGIRLCKARFPVNFK*VKPCNPVTGKDDRR Trigger: TCTCCTGTCGTCCTTCCCTGTGACTGGGTTACATGGTTTAACTCACTTAAAATTAACAGGGAACCGAGCCTTACAGAGCCTGATACCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS TCA 90 bp | TTCTTTCCCAGGGAGTGGATTCTATTATTATGGAGATGCAGGGATTaGAGGCTTCTCAAATTCTGTAGCGCTTCCTCCGGAACCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFPREWILLLWRCRD*RLLKFCSASSGTCL Trigger: GAGACAGGTTCCGGAGGAAGCGCTACAGAATTTGAGAAGCCTTCAATCCCTGCATCTCCATAATAATAGAATCCACTCCCTGGGAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173740.2 |
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| CDS-3UTR CAA 90 bp | ACACACAACCATCTCTGTGTAGCCATTAAAACTAAACTCTGTGGGCAACATAGCACGTCTGTGAGAGCATaGTCATCTAGCCACAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: THNHLCVAIKTKLCGQHSTSVRA*SSSHRC Trigger: GCACCTGTGGCTAGATGACAATGCTCTCACAGACGT...GCTATGTTGCCCACAGAGTTTAGTTTTAATGGCTACACAGAGATGGTTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | AGTGGACTTAACGCCCTGCGTTTGAGCACTGAAAATGCACAGCCATTTGAGAGAAACTTCGAAGAGCACTaGACAGAAAAACCTCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGLNALRLSTENAQPFERNFEEH*TEKPRS Trigger: GGAACGAGGTTTTTCTGTCAAGTGCTCTTCGAAGTT...TCTCTCAAATGGCTGTGCATTTTCAGTGCTCAAACGCAGGGCGTTAAGTCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | AACCTTGAAACCAGTTTTATCTCAGCAAGGGAGAATGCACTGGATACTTATCTACAGAGGGGAGAGGCATaGTACTTACTGCCTCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLETSFISARENALDTYLQRGEA*YLLPPS Trigger: GCTAGGAGGCAGTAAGTACAATGCCTCTCCCCTCTG...TAGATAAGTATCCAGTGCATTCTCCCTTGCTGAGATAAAACTGGTTTCAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | TCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGTCCGTCAAAAGGCAAAAAGAGATACTCCAACAAATaGGATGGGGTTGTCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVQETGVLEGACPSKGKKRYSNK*DGVVIE Trigger: TTCTATGACAACCCCATCCAATTTGTTGGAGTATCT...CTTTTTGCCTTTTGACGGACAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | TATATATGGATTAAAAATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGACCTGTCTCAGCTGGTaGTTCTGCAGCATAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: YIWIKNVSPRNWCLGRSLTCLSW*FCSIST Trigger: AGTGCTTATGCTGCAGAACAACCAGCTGAGACAGGT...CAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATTTTTAATCCATATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS CCA 90 bp | TATGCCTCAGGTCAATTTTCTGAAGTTTTTGGCAGCCTGACAAACTaGGTAAGTCTTCGAGTAGGTTGTAAGACAAATCTAGCACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YASGQFSEVFGSLTN*VSLRVGCKTNLALG Trigger: TCCAAGTGCTAGATTTGTCTTACAACCTACTCGAAGACTTACCCAGTTTGTCAGGCTGCCAAAAACTTCAGAAAATTGACCTGAGGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS-3UTR CAA 90 bp | GCACCACTGTTTCCACACCAATTTAGAGATGTTTGCTTGGGTTTTAAGGTAGGTGAAGAGATGAGATCTTaGCTCCAGTTAAAGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: APLFPHQFRDVCLGFKVGEEMRS*LQLKSD Trigger: GTCTGACTTTAACTGGAGCAAAGATCTCATCTCTTC...ACCTACCTTAAAACCCAAGCAAACATCTCTAAATTGGTGTGGAAACAGTGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | GAGAGTGATGAACATCTTGCCAGAAGCATGCTCCTACTCAGAAATAAATACAGAAAGGACGACAGGAGATaGGATGATAGGTCCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ESDEHLARSMLLLRNKYRKDDRR*DDRSNF Trigger: AAAGTTGGACCTATCATCCAATCTCCTGTCGTCCTT...TCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGCAAGATGTTCATCACTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | GCCAGAAGCATGCTCCTACTCAGAAATAAATACAGATCCGACAATTTCATACTGGGCATTTCTATAATCTaGAGCTCTGGGAAGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSMLLLRNKYRSDNFILGISII*SSGKFA Trigger: TGCAAACTTCCCAGAGCTCAAGATTATAGAAATGCC...CAGTATGAAATTGTCGGATCTGTATTTATTTCTGAGTAGGAGCATGCTTCTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | AGGGAGAATGCACTGGATACTTATCTATATAACCCAGTGTCTTTTTGTTGTTGTCCTAGTTCCTTAAGGTaGGAGAGTGTCTTGATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RENALDTYLYNPVSFCCCPSSLR*ESVLIA Trigger: TGCAATCAAGACACTCTCCAACCTTAAGGAACTAGG...ACAACAACAAAAAGACACTGGGTTATATAGATAAGTATCCAGTGCATTCTCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS-3UTR CAA 90 bp | TATATATGGATTAAAAATGTCAGTCCAAGAAACTGGTGTCTTGGAAGGAGCCTGAACTGCAGTAGAGCTTaGTGTAGGCAATGGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: YIWIKNVSPRNWCLGRSLNCSRA*CRQWSL Trigger: TAATGACCATTGCCTACACAAAGCTCTACTGCAGTT...CAGGCTCCTTCCAAGACACCAGTTTCTTGGACTGACATTTTTAATCCATATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020350.15 |
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| CDS GCA 72 bp | GGCAGCCCCGCGGTATCGCATCTGGTCCCGGTGAGCTaGCGGCGGCCACCAACTGCAGCAGCGCCAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPAVSHLVPVS*RRPPTAAAPAR Trigger: CCTTGCTGGCGCTGCTGCAGTTGGTGGCCGCCGGCAGCTCACCGGGACCAGATGCGATACCGCGGGGCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS GCA 72 bp | GCATCTGGTCCCGGTGAGCTGCCGGCGGCCACCAACTaGAGCAGCGCCAGCAAGGACAGGAGCATGTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: ASGPGELPAATN*SSASKDRSMWT Trigger: CGTCCACATGCTCCTGTCCTTGCTGGCGCTGCTGCAGTTGGTGGCCGCCGGCAGCTCACCGGGACCAGATGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS TCA 72 bp | GAGCAGCATCCTGCCATCCAGCTCACAGTGACAGTGTaGTGGGCAGCCCCGCGGTATCGCATCTGGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: EQHPAIQLTVTV*WAAPRYRIWSR Trigger: CCGGGACCAGATGCGATACCGCGGGGCTGCCCATCACACTGTCACTGTGAGCTGGATGGCAGGATGCTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS TCA 72 bp | CCCACCACGCACCGTGCTGAGCAAAACGGCCAAAAGTaGATGCATCCACGGCAGCCAGCACAGCACTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTTHRAEQNGQK*MHPRQPAQHWR Trigger: TCTCCAGTGCTGTGCTGGCTGCCGTGGATGCATTCACTTTTGGCCGTTTTGCTCAGCACGGTGCGTGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS GCA 72 bp | GGGACGTCTGTGAGAGCATTGTCATCTAGCCACAGGTaGCTCAGGGAGTGCAGGCCGCTGAAACAGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GTSVRALSSSHR*LRECRPLKQLG Trigger: ACCCAGCTGTTTCAGCGGCCTGCACTCCCTGAGGCACCTGTGGCTAGATGACAATGCTCTCACAGACGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 |
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| CDS CCA 72 bp | CCACCAAGGCATTGCAGGAAAGCGCCAGTACTGCCGTaGTCCACACCCCGATTCGGATCAGCCAGCTACCAA | + |
|
Preference number: 6 (lower is better) Translates to: PPRHCRKAPVLP*STPRFGSASYQ Trigger: TTGGTAGCTGGCTGATCCGAATCGGGGTGTGGACCACGGCAGTACTGGCGCTTTCCTGCAATGCCTTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS TCA 72 bp | TGGCAGCCGATTCCGTCTTCCCACCACGCACCGTGCTaGGCAAAACGGCCAAAAGTGAATGCATCCACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WQPIPSSHHAPC*AKRPKVNASTA Trigger: TGCCGTGGATGCATTCACTTTTGGCCGTTTTGCTCAGCACGGTGCGTGGTGGGAAGACGGAATCGGCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS GCA 72 bp | GCAAGGGCAGGCAGAGGGGAGAGGCATTGTACTTACTaGCTCCTAGCAAGGGGATTGTGGCAATGGTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARAGRGERHCTY*LLARGLWQWSG Trigger: CCCTGACCATTGCCACAATCCCCTTGCTAGGAGGCAGTAAGTACAATGCCTCTCCCCTCTGCCTGCCCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CAA 72 bp | CTTCTGAAAGCCTGGACAGGGACGTCTGTGAGAGCATaGTCATCTAGCCACAGGTGCCTCAGGGAGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLKAWTGTSVRA*SSSHRCLRECR Trigger: CCTGCACTCCCTGAGGCACCTGTGGCTAGATGACAATGCTCTCACAGACGTCCCTGTCCAGGCTTTCAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 |
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| CDS CAA 72 bp | AGAGGAGTTCTGAACACGGTCAAAGCCACCAAGGCATaGCAGGAAAGCGCCAGTACTGCCGTGGTCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: RGVLNTVKATKA*QESASTAVVHT Trigger: GGTGTGGACCACGGCAGTACTGGCGCTTTCCTGCAATGCCTTGGTGGCTTTGACCGTGTTCAGAACTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CAA 72 bp | CGATTCGGAAGCAAAAATGGACAGGAAGCCAACGATTaGGCAGCCGATTCCGTCTTCCCACCACGCACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RFGSKNGQEAND*AADSVFPPRTV Trigger: CACGGTGCGTGGTGGGAAGACGGAATCGGCTGCCAAATCGTTGGCTTCCTGTCCATTTTTGCTTCCGAATCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CAA 90 bp | GCTGATAAACTTCTGAAAGCCTGGACAGGGACGTCTGTGAGAGCATaGTCATCTAGCCACAGGTGCCTCAGGGAGTGCAGGCCGCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ADKLLKAWTGTSVRA*SSSHRCLRECRPLK Trigger: TTTCAGCGGCCTGCACTCCCTGAGGCACCTGTGGCTAGATGACAATGCTCTCACAGACGTCCCTGTCCAGGCTTTCAGAAGTTTATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 |
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| CDS TCA 72 bp | AGCTGGTTGTTCTGCAGCATAAGCACTTTGAGGCTGTaGAGGCCCGTGAACGCTCCCTTGGGAATGTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SWLFCSISTLRL*RPVNAPLGMCV Trigger: GACACACATTCCCAAGGGAGCGTTCACGGGCCTTCACAGCCTCAAAGTGCTTATGCTGCAGAACAACCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CAA 90 bp | GAAGATCGACGATTCGGAAGCAAAAATGGACAGGAAGCCAACGATTaGGCAGCCGATTCCGTCTTCCCACCACGCACCGTGCTGAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: EDRRFGSKNGQEAND*AADSVFPPRTVLSK Trigger: TTTGCTCAGCACGGTGCGTGGTGGGAAGACGGAATCGGCTGCCAAATCGTTGGCTTCCTGTCCATTTTTGCTTCCGAATCGTCGATCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS TCA 72 bp | AGAGAGATGACAGCTTTCAGTCATGGGGTAAGCTGGTaGTGCCCCGGAAGTGGAAGGCAAGTCATAGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: REMTAFSHGVSW*CPGSGRQVIGY Trigger: ATAGCCTATGACTTGCCTTCCACTTCCGGGGCATCACCAGCTTACCCCATGACTGAAAGCTGTCATCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CCA 72 bp | GTCATGGCTTGCAGGGCTGATAAACTTCTGAAAGCCTaGACAGGGACGTCTGTGAGAGCATTGTCATCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VMACRADKLLKA*TGTSVRALSSS Trigger: GCTAGATGACAATGCTCTCACAGACGTCCCTGTCCAGGCTTTCAGAAGTTTATCAGCCCTGCAAGCCATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 |
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| CDS CCA 72 bp | AGGATAAGAAAGCCACGGGGCAGTAAAGGATGCAGTTaGCGAAGAGCAACAGAGCAATGTGCTTCACCATCG | + |
|
Preference number: 6 (lower is better) Translates to: RIRKPRGSKGCS*RRATEQCASPS Trigger: CGATGGTGAAGCACATTGCTCTGTTGCTCTTCGCCAACTGCATCCTTTACTGCCCCGTGGCTTTCTTATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CAA 90 bp | AGAGAAGGGTTGCCTACGAACGCTCGCTCCGGTATTGACCTGATGTaGTTGCTGTGGAATCCTAGTTCCTTAAGGTTGGAGAGTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: REGLPTNARSGIDLM*LLWNPSSLRLESVL Trigger: CAAGACACTCTCCAACCTTAAGGAACTAGGATTCCACAGCAACAACATCAGGTCAATACCGGAGCGAGCGTTCGTAGGCAACCCTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000173740.2 |
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| CDS GCA 72 bp | ATGTGGTGTATTTTGTTCAGGGCCAAGGTCATGGCTTaGAGGGCTGATAAACTTCTGAAAGCCTGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MWCILFRAKVMA*RADKLLKAWTG Trigger: CCCTGTCCAGGCTTTCAGAAGTTTATCAGCCCTGCAAGCCATGACCTTGGCCCTGAACAAAATACACCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 |
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| CDS GCA 72 bp | AGGAGAAGGATAAGAAAGCCACGGGGCAGTAAAGGATaGAGTTGGCGAAGAGCAACAGAGCAATGTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRIRKPRGSKG*SWRRATEQCAS Trigger: TGAAGCACATTGCTCTGTTGCTCTTCGCCAACTGCATCCTTTACTGCCCCGTGGCTTTCTTATCCTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CAA 72 bp | TTGCCTACGAACGCTCGCTCCGGTATTGACCTGATGTaGTTGCTGTGGAATCCTAGTTCCTTAAGGTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPTNARSGIDLM*LLWNPSSLRLE Trigger: CTCCAACCTTAAGGAACTAGGATTCCACAGCAACAACATCAGGTCAATACCGGAGCGAGCGTTCGTAGGCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000173740.2 |
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| CDS CCA 72 bp | AACGCTCGCTCCGGTATTGACCTGATGTTGTTGCTGTaGAATCCTAGTTCCTTAAGGTTGGAGAGTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NARSGIDLMLLL*NPSSLRLESVL Trigger: CAAGACACTCTCCAACCTTAAGGAACTAGGATTCCACAGCAACAACATCAGGTCAATACCGGAGCGAGCGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000173740.2 |
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| CDS CCA 72 bp | CATGTAACCCAGTCACAGGGAAGGACGACAGGAGATTaGATGATAGGTCCAACTTTATTAGAGACGGCAACG | + |
|
Preference number: 6 (lower is better) Translates to: HVTQSQGRTTGD*MIGPTLLETAT Trigger: CGTTGCCGTCTCTAATAAAGTTGGACCTATCATCCAATCTCCTGTCGTCCTTCCCTGTGACTGGGTTACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CAA 72 bp | CCATGTAACCCAGTCACAGGGAAGGACGACAGGAGATaGGATGATAGGTCCAACTTTATTAGAGACGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PCNPVTGKDDRR*DDRSNFIRDGN Trigger: GTTGCCGTCTCTAATAAAGTTGGACCTATCATCCAATCTCCTGTCGTCCTTCCCTGTGACTGGGTTACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CCA 72 bp | GGATTCTATTATTATGGAGATGCAGAACCACGAGGCTaGAGAGGTTTCCAAAGGCGTAGTCTGCTATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GFYYYGDAEPRG*RGFQRRSLLCG Trigger: ACCACATAGCAGACTACGCCTTTGGAAACCTCTCCAGCCTCGTGGTTCTGCATCTCCATAATAATAGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 |
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| CDS TCA 72 bp | AGGGAGTGGATTCTATTATTATGGAGATGCAGGGATTaGAGGCTTCTCAAATTCTGTAGCGCTTCCTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: REWILLLWRCRD*RLLKFCSASSG Trigger: TCCGGAGGAAGCGCTACAGAATTTGAGAAGCCTTCAATCCCTGCATCTCCATAATAATAGAATCCACTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173740.2 |
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| CDS CCA 72 bp | CTGTGGAGTCCATCAAAGCATTTCTTTCCCAGGGAGTaGATTCTATTATTATGGAGATGCAGAACCACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWSPSKHFFPRE*ILLLWRCRTTR Trigger: CCTCGTGGTTCTGCATCTCCATAATAATAGAATCCACTCCCTGGGAAAGAAATGCTTTGATGGACTCCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 |
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| CDS CAA 90 bp | GGTATTGACCTGATGTTGTTGCTGTGGAATCCTAGTTCCTTAAGGTaGGAGAGTGTCTTGATTGCAGTGGGGAATTCATCAAGGTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: GIDLMLLLWNPSSLR*ESVLIAVGNSSRLL Trigger: TAATAACCTTGATGAATTCCCCACTGCAATCAAGACACTCTCCAACCTTAAGGAACTAGGATTCCACAGCAACAACATCAGGTCAATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020350.15 ENSMUST00000173740.2 |
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| CDS TCA 72 bp | CCATTCAAAGTCAGTGTTCTTAGTTCAGGCAAATGCTaGAAAGCAGATACTCCAACAAATTGGATGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PFKVSVLSSGKC*KADTPTNWMGL Trigger: CAACCCCATCCAATTTGTTGGAGTATCTGCTTTTCAGCATTTGCCTGAACTAAGAACACTGACTTTGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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| CDS CCA 72 bp | GGTCAATTTTCTGAAGTTTTTGGCAGCCTGACAAACTaGGTAAGTCTTCGAGTAGGTTGTAAGACAAATCTA | + |
|
Preference number: 6 (lower is better) Translates to: GQFSEVFGSLTN*VSLRVGCKTNL Trigger: TAGATTTGTCTTACAACCTACTCGAAGACTTACCCAGTTTGTCAGGCTGCCAAAAACTTCAGAAAATTGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020350.15 ENSMUST00000172806.8 ENSMUST00000173740.2 |
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