Pregenerated sensors for LGR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050199Ensembl transcript IDs: ENSMUST00000046548.14, ENSMUST00000111037.3
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTaGGAGGGGAATCACTGGGATTTCATCAGAGCAATGTGCAATGAA | + |
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Preference number: 1 (lower is better) Translates to: AFCCVPVLCAAIVKH*EGNHWDFIRAMCNE Trigger: TTCATTGCACATTGCTCTGATGAAATCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGCACAGACTTCTGACTTaGAAAATAAACTGCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: QPFAVSLCSVLRLSNTERHRLLT*KINCHL Trigger: AAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTG...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR GCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGTTTGCTGTGTCCCTGTaGTCTGTGCTGCGATTGTCA | + |
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Preference number: 2 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQFAVSL*SVLRLS Trigger: TGACAATCGCAGCACAGAGCACAGGGACACAGCAAA...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTGGTATGAGCTGTGATTaGTTGATGGAGGAAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPGMSCD*LMEENS Trigger: ACTGTTTTCCTCCATCAACCAATCACAGCTCATACC...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCTCAAGGTATGAGCTGTaGTTGGTTGATGGAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSSRYEL*LVDGGK Trigger: TTTTCCTCCATCAACCAATCACAGCTCATACCTTGA...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR TCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGACACAGACTTCTGACTTaGAAAATAAACTGCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGHRLLT*KINCHL Trigger: AAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTG...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGTCAAGGTATGAGCTGTaGTTGGTTGATGGAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQSRYEL*LVDGGK Trigger: TTTTCCTCCATCAACCAATCACAGCTCATACCTTGA...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR TCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGACAGAGCAATGTGCAATaGACAAAAACAAATGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGQSNVQ*TKTNVL Trigger: CAGAACATTTGTTTTTGTTCATTGCACATTGCTCTG...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGATCCCTTGGATACTATaGAAAGCTCAGTGGTACTTA | + |
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Preference number: 2 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQIPWIL*KAQWYL Trigger: TAAGTACCACTGAGCTTTTCATAGTATCCAAGGGAT...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR GCA 72 bp | AACCCACGTGGCAATCAGCCTTTTGCTGTGTCCCTGTaGTCTGTGCTGCGATTGTCAAACACTGAGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: NPRGNQPFAVSL*SVLRLSNTERG Trigger: TCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATTGCCACGTGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR GCA 72 bp | GCAATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTaGGATTGTCAAACACTGAGAGGGGAATCACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: AISLLLCPCALC*DCQTLRGESLG Trigger: TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR TCA 72 bp | TGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTaGGAGGGGAATCACTGGGATTTCATCAGAGCAATG | + |
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Preference number: 3 (lower is better) Translates to: CVPVLCAAIVKH*EGNHWDFIRAM Trigger: CATTGCTCTGATGAAATCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR GCA 72 bp | TCACCTCTACTTAAACCCACGTGGCAATCAGCCTTTTaGTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: SPLLKPTWQSAF*CVPVLCAAIVK Trigger: TTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR CCA 72 bp | GTACTTACTACTCAGTCACCTCTACTTAAACCCACGTaGCAATCAGCCTTTTGCTGTGTCCCTGTGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VLTTQSPLLKPT*QSAFCCVPVLC Trigger: ACAGAGCACAGGGACACAGCAAAAGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR CAA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGGTGGCAATCAGCCTTTaGCTGTGTCCCTGTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQVAISL*LCPCAL Trigger: CAGAGCACAGGGACACAGCAAAAGGCTGATTGCCAC...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR TCA 72 bp | AAAGGTCAAAAGACAGACAGCTCAAGGTATGAGCTGTaGTTGGTTGATGGAGGAAAACAGTCGCGGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: KGQKTDSSRYEL*LVDGGKQSRTG Trigger: TCCTGTCCGCGACTGTTTTCCTCCATCAACCAATCACAGCTCATACCTTGAGCTGTCTGTCTTTTGACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR CAA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGTCACAGACTTCTGACTaGAAAAATAAACTGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: NQPFAVSLCSVLRLSNTESQTSD*KNKLPP Trigger: AGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGA...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTTCACAGACTTCTGACTaGAAAAATAAACTGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPSQTSD*KNKLPP Trigger: AGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGA...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAGGTCGCCGTCGCAGCTaGAGGGCGCAGCGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGGRRRS*RAQRRE Trigger: CTCTCTGCGCTGCGCCCTGCAGCTGCGACGGCGACC...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR CCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGCAGCGCCTGCAGGGTTaGCAGGTTGCTGAGCGGACG | + |
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Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEQRLQG*QVAERT Trigger: CGTCCGCTCAGCAACCTGCCAACCCTGCAGGCGCTG...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR CCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGCCACAGGCCTGCACCTaGTCAGAGCTGTCCGAGACA | + |
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Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERPQACT*SELSET Trigger: TGTCTCGGACAGCTCTGACCAGGTGCAGGCCTGTGG...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGGCTCGTCCACAGGCCTaGACCTGGTCAGAGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEARPQA*TWSELS Trigger: GGACAGCTCTGACCAGGTGCAGGCCTGTGGACGAGC...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGCTACCTTGCAGCCGCTaGCAGTTTCCCACCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERLPCSR*QFPTKC Trigger: GCATTTGGTGGGAAACTGGCAGCGGCTGCAAGGTAG...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAGAATATTGCCCTCCGTaGAAAAGGGGGAAGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGEYCPP*KRGKQP Trigger: AGGCTGCTTCCCCCTTTTTCACGGAGGGCAATATTC...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR CCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTGCCAGTTGTAGTGCTTaGGTGAAGGCGCTGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPASCSA*VKALSP Trigger: GGGGCTCAGCGCCTTCACCCAAGCACTACAACTGGC...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGAAGTCGGGGATGCTTaGGATGTTGTTGAGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTEREVGDA*DVVESQ Trigger: TTGGCTCTCAACAACATCTCAAGCATCCCCGACTTC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAGAGACCCAGCTACCTTaGAGCCGCTGCCAGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGETQLP*SRCQFP Trigger: GGGAAACTGGCAGCGGCTGCAAGGTAGCTGGGTCTC...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR CCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGACAGTTCCGGCCAGATTaGGGAACCACTGCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGQFRPD*GTTAPG Trigger: GCCTGGTGCAGTGGTTCCCCAATCTGGCCGGAACTG...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR CCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAAGACCAGTAGGCCTCTaGCCTCTGGCAAGAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGRPVGL*PLARGH Trigger: GTGGCCTCTTGCCAGAGGCCAGAGGCCTACTGGTCT...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAGGGTTAGGACTTTaGGTTCTTTCAACCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERGGLGL*VLSTQT Trigger: TGTCTGGGTTGAAAGAACTCAAAGTCCTAACCCTCC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGTGCTTGAGATGTTGTTaGGAGCCAAGGTCAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTECLRCC*EPRSAP Trigger: AGGCGCTGACCTTGGCTCTCAACAACATCTCAAGCA...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGCTTGAAAGGTTGGTaGATGCGAAGTCGGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTESLKGW*MRSRGC Trigger: GCATCCCCGACTTCGCATTCACCAACCTTTCAAGCT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGCAGCACTACCAAGCTTaGAAGGTTGGTGAATGCGAA | + |
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Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERQHYQA*KVGECE Trigger: TTCGCATTCACCAACCTTTCAAGCTTGGTAGTGCTG...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGACAGGTTGTGAAATGCTaGGTTCCCCACAAAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGQVVKC*VPHKRQ Trigger: CTGTCTTTTGTGGGGAACTCAGCATTTCACAACCTG...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAAGATCAGACAGGTTGTaGAATGCTGAGTTCCCCACA | + |
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Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGRSDRL*NAEFPT Trigger: TGTGGGGAACTCAGCATTTCACAACCTGTCTGATCT...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGTGGCAAGCACAAGGGTaGTGCAGAATATTGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEWQAQG*CRILPS Trigger: GGAGGGCAATATTCTGCATCACCCTTGTGCTTGCCA...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR TCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCATCCGTGTTTCCTGGTaGCACGCCGCTTCAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSIRVSW*HAASGA Trigger: AGCTCCTGAAGCGGCGTGTCACCAGGAAACACGGAT...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGGCCAAGGTCAGCGCCTaGAGGGTTGGCAGGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQAKVSA*RVGRLL Trigger: CAGCAACCTGCCAACCCTGCAGGCGCTGACCTTGGC...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGCTTCACTTTCAGCAGTaGTGGTGGCATTTGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERLHFQQ*WWHLLH Trigger: ATGCAGCAAATGCCACCAGCACTGCTGAAAGTGAAG...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTCTACCTTGCAGCCGCTaGCAGTTTCCCACCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPLPCSR*QFPTKC Trigger: GCATTTGGTGGGAAACTGGCAGCGGCTGCAAGGTAG...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGGGGGCTGATGGAGATTaGCGTGATCAATGGTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEGADGD*RDQWCE Trigger: TTCGCACCATTGATCACGGCAATCTCCATCAGCCCC...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAACAGTCAGGTTACCCTaGAAGTGGGAATACATGCCA | + |
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Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGTVRLP*KWEYMP Trigger: TGGCATGTATTCCCACTTGCAGGGTAACCTGACTGT...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAATGGGCCGACTGTGTaGCACAATCAGACCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTENGPTV*HNQTSR Trigger: CCTACTGGTCTGATTGTGGCACACAGTCGGCCCATT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS-3UTR GCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAGGAATCCTCTTCATCTaGATAGTCAGAATGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGGILFI*IVRMGR Trigger: TCGGCCCATTCTGACTATGCAGATGAAGAGGATTCC...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGACTGATATCCAGTGCTTaGGTGAAGGCGCTGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGLISSA*VKALSP Trigger: GGGGCTCAGCGCCTTCACCCAAGCACTGGATATCAG...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046548.14 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGCACTCAGTCCACGAATaGCTTCACTGGGTACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERHSVHE*LHWVLF Trigger: AAACAGTACCCAGTGAAGCCATTCGTGGACTGAGTG...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGATTGGCAAAGTCTCTaGCTGCCAAGGCATCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERDWQSL*LPRHLS Trigger: TGAAAGATGCCTTGGCAGCCAGAGACTTTGCCAATC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGATCCCCACAACCGCCTTaGCTGCTGATGGAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGSPQPP*LLMETE Trigger: CTCAGTCTCCATCAGCAGCCAAGGCGGTTGTGGGGA...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| 3UTR CAA 72 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATaGTCAAACACTGAGAGGGGAATCACTGGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLR*SNTERGITGIS Trigger: TGAAATCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGTACTGTTTTCAACTaGTTGTTCTGGAGGGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERGTVFN*LFWRVR Trigger: CCTAACCCTCCAGAACAATCAGTTGAAAACAGTACC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTTGCTTGAGATGTTGTTaGGAGCCAAGGTCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPCLRCC*EPRSAP Trigger: AGGCGCTGACCTTGGCTCTCAACAACATCTCAAGCA...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGCAGAAATCAAGCCTATaGAGAGCTTGGAGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEQKSSL*RAWRQA Trigger: TGCCTGCCTCCAAGCTCTTCATAGGCTTGATTTCTG...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTTGGCAAGCACAAGGGTaGTGCAGAATATTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPWQAQG*CRILPS Trigger: GGAGGGCAATATTCTGCATCACCCTTGTGCTTGCCA...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGGAGACCCAGCTACCTTaGAGCCGCTGCCAGTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQETQLP*SRCQFP Trigger: GGGAAACTGGCAGCGGCTGCAAGGTAGCTGGGTCTC...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTAATGGGCCGACTGTGTaGCACAATCAGACCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPNGPTV*HNQTSR Trigger: CCTACTGGTCTGATTGTGGCACACAGTCGGCCCATT...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGGACTGAGGTAATATaGTTGGCATCTAAGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERGTEVI*LASKRR Trigger: TCTACGCTTAGATGCCAACCATATTACCTCAGTCCC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCAGCGCCTGCAGGGTTaGCAGGTTGCTGAGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLQRLQG*QVAERT Trigger: CGTCCGCTCAGCAACCTGCCAACCCTGCAGGCGCTG...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGTCCGCAGCATCTTTTaGTTTTGGCACAGATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERVRSIF*FWHRSS Trigger: TGATGATCTGTGCCAAAACCAAAAGATGCTGCGGAC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGGAAAACGTACAGGACTaGATTCAGGCAAGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEENVQD*IQASRQ Trigger: CTGCCTGCTTGCCTGAATCCAGTCCTGTACGTTTTC...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGTTACCCTGCAAGTaGGAATACATGCCACAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTERLPCK*EYMPQS Trigger: CGACTGTGGCATGTATTCCCACTTGCAGGGTAACCT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCCACAGATGCCGCAACTaGACGAGCCCTTCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSHRCRN*TSPSKL Trigger: CAGTTTTGAAGGGCTCGTTCAGTTGCGGCATCTGTG...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAGCAAAAGCTCCACTGTaGATTTCACGAATCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGAKAPL*ISRIRF Trigger: AAACCTGATTCGTGAAATTCACAGTGGAGCTTTTGC...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAGAATATTGCCCTCCGTaGAAAAGGGGGAAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGEYCPP*KRGKQP Trigger: AGGCTGCTTCCCCCTTTTTCACGGAGGGCAATATTC...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAGCCAAGGTCAGCGCCTaGAGGGTTGGCAGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQAKVSA*RVGRLL Trigger: CAGCAACCTGCCAACCCTGCAGGCGCTGACCTTGGC...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGTGCTGGTGGCATTTaGTGCATCTGTAGCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTESAGGI*CICSTF Trigger: AAAGGTGCTACAGATGCAGCAAATGCCACCAGCACT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAGGGGCTGATGGAGATTaGCGTGATCAATGGTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGGADGD*RDQWCE Trigger: TTCGCACCATTGATCACGGCAATCTCCATCAGCCCC...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGCAAGTGGGAATACATaGCACAGTCGTAGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERASGNT*HSRSRN Trigger: ATTTCTACTACGACTGTGGCATGTATTCCCACTTGC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGACAGTCAGGTTACCCTaGAAGTGGGAATACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTETVRLP*KWEYMP Trigger: TGGCATGTATTCCCACTTGCAGGGTAACCTGACTGT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAGCTCGTCCACAGGCCTaGACCTGGTCAGAGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQARPQA*TWSELS Trigger: GGACAGCTCTGACCAGGTGCAGGCCTGTGGACGAGC...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAGAAGTCGGGGATGCTTaGGATGTTGTTGAGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGEVGDA*DVVESQ Trigger: TTGGCTCTCAACAACATCTCAAGCATCCCCGACTTC...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTCAGCACTACCAAGCTTaGAAGGTTGGTGAATGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPQHYQA*KVGECE Trigger: TTCGCATTCACCAACCTTTCAAGCTTGGTAGTGCTG...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAAGGGATGTTAGGCCTTaGAAAGTAGTTTCCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGRDVRP*KVVSFI Trigger: GATAAAGGAAACTACTTTTCAAGGCCTAACATCCCT...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGACAGAAATCAAGCCTATaGAGAGCTTGGAGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGQKSSL*RAWRQA Trigger: TGCCTGCCTCCAAGCTCTTCATAGGCTTGATTTCTG...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTGCACTAGGGTCACAGTaGATCCTAATGATGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPALGSQ*ILMMVS Trigger: AGACACCATCATTAGGATTCACTGTGACCCTAGTGC...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGTGGATTACCAGCAAATaGTCCATCCGGGATAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEWITSK*SIRDNR Trigger: TCTGTTATCCCGGATGGAGCATTTGCTGGTAATCCA...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGAGATTGGGGAACCACTaGACCAGGCTTGCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQRLGNH*TRLAPR Trigger: TCGTGGTGCAAGCCTGGTGCAGTGGTTCCCCAATCT...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGATCATCAGGTATGCTaGTTATTTTTGTCCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERDHQVC*LFLSLS Trigger: TGACAGGGACAAAAATAAGCAGCATACCTGATGATC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGATGAGCCAAGCAACGTaGTTAATCATGCTAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEMSQAT*LIMLDW Trigger: CCAGTCTAGCATGATTAAGCACGTTGCTTGGCTCAT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGACAAGGCTTTTGGGTaGATAAAAGAAAGGTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QPFAVSLCSVLRLSNTERDKAFG*IKERSL Trigger: TAACGACCTTTCTTTTATCCACCCAAAAGCCTTGTC...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAACAGTTCCGGCCAGATTaGGGAACCACTGCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQQFRPD*GTTAPG Trigger: GCCTGGTGCAGTGGTTCCCCAATCTGGCCGGAACTG...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGACACTTTCAGCAGTGCTaGTGGCATTTGCTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGHFQQC*WHLLHL Trigger: CAGATGCAGCAAATGCCACCAGCACTGCTGAAAGTG...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCACAGGCCTGCACCTaGTCAGAGCTGTCCGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLPQACT*SELSET Trigger: TGTCTCGGACAGCTCTGACCAGGTGCAGGCCTGTGG...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAGAAATAGAATTACTGTaGAATCCCAGCTCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGEIELL*NPSSLR Trigger: CCTTAAAGAGCTGGGATTTCACAGTAATTCTATTTC...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCCAGGTTGTGAAATGCTaGGTTCCCCACAAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSQVVKC*VPHKRQ Trigger: CTGTCTTTTGTGGGGAACTCAGCATTTCACAACCTG...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCCCCACAAGTTTAAGTTaGTTGAGCCCATTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSPTSLS*LSPFRP Trigger: AGGCCTGAATGGGCTCAATCAACTTAAACTTGTGGG...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGATCCGTGTTTCCTGGTaGCACGCCGCTTCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLIRVSW*HAASGA Trigger: AGCTCCTGAAGCGGCGTGTCACCAGGAAACACGGAT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGTTTTGTCAGAAGAAATaGCTCACAGCAGTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEFCQKK*LTAVTD Trigger: GTCTGTGACTGCTGTGAGTCATTTCTTCTGACAAAA...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCAGTGCTGGTGGCATTTaGTGCATCTGTAGCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSSAGGI*CICSTF Trigger: AAAGGTGCTACAGATGCAGCAAATGCCACCAGCACT...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTATGAGCCAAGCAACGTaGTTAATCATGCTAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPMSQAT*LIMLDW Trigger: CCAGTCTAGCATGATTAAGCACGTTGCTTGGCTCAT...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGACACTCAGTCCACGAATaGCTTCACTGGGTACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGHSVHE*LHWVLF Trigger: AAACAGTACCCAGTGAAGCCATTCGTGGACTGAGTG...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCGATTGGCAAAGTCTCTaGCTGCCAAGGCATCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSDWQSL*LPRHLS Trigger: TGAAAGATGCCTTGGCAGCCAGAGACTTTGCCAATC...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGTCCCCACAACCGCCTTaGCTGCTGATGGAGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLSPQPP*LLMETE Trigger: CTCAGTCTCCATCAGCAGCCAAGGCGGTTGTGGGGA...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCGGTACTGTTTTCAACTaGTTGTTCTGGAGGGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSGTVFN*LFWRVR Trigger: CCTAACCCTCCAGAACAATCAGTTGAAAACAGTACC...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCGATCAATGGTGCGAATaGGAAAAATGCAACAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSDQWCE*EKCNRA Trigger: TGCCCTGTTGCATTTTTCTCATTCGCACCATTGATC...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTTTTTGTCAGAAGAAATaGCTCACAGCAGTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPFCQKK*LTAVTD Trigger: GTCTGTGACTGCTGTGAGTCATTTCTTCTGACAAAA...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGCATACTGATATCCAGTaGTTGGGTGAAGGCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQHTDIQ*LGEGAE Trigger: CTCAGCGCCTTCACCCAAGCACTGGATATCAGTATG...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046548.14 |
||
| CDS-3UTR GCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGAGATTGGGGAACCACTaGACCAGGCTTGCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLRLGNH*TRLAPR Trigger: TCGTGGTGCAAGCCTGGTGCAGTGGTTCCCCAATCT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGACAGATCATCAGGTATaGTGCTTATTTTTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTETDHQV*CLFLSL Trigger: CAGGGACAAAAATAAGCAGCATACCTGATGATCTGT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCCAGTTTCCCACCAAATaGCAAATTCAGCAAATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSQFPTK*QIQQIG Trigger: GCCGATTTGCTGAATTTGGCATTTGGTGGGAAACTG...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGACTGTCGGAGGTGACTaGTTTTCCCATTTTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTETVGGD*FSHFSL Trigger: TAATGAAAAATGGGAAAAGCAGTCACCTCCGACAGT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTCACGAATGGCTTCACTaGGTACTGTTTTCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPHEWLH*VLFSTD Trigger: ATCAGTTGAAAACAGTACCCAGTGAAGCCATTCGTG...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAGGATTATCATACAAATaGATAGTTCTTAGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPCALCCDCQTLRGESLGGLSYK*IVLSSG Trigger: TCCACTGCTAAGAACTATCCATTTGTATGATAATCC...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGCATCTTTTGGTTTTaGCACAGATCATCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTESIFWF*HRSSGM Trigger: CATACCTGATGATCTGTGCCAAAACCAAAAGATGCT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAGTCCGCAGCATCTTTTaGTTTTGGCACAGATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGVRSIF*FWHRSS Trigger: TGATGATCTGTGCCAAAACCAAAAGATGCTGCGGAC...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAAGGCATCTTTCAGCTaGAAGTTACCCACAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEKASFS*KLPTSL Trigger: TAAACTTGTGGGTAACTTCCAGCTGAAAGATGCCTT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| 3UTR CAA 72 bp | TTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATaGCCAGTCCAGATGAGGACATTACTTAGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FGNVRAASDIRT*PVQMRTLLRAI Trigger: GATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAACTGTCCTCCGGGACTaGGGTAATATGGTTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQTVLRD*GNMVGI Trigger: GATGCCAACCATATTACCTCAGTCCCGGAGGACAGT...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCACAGATGCCGCAACTaGACGAGCCCTTCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLHRCRN*TSPSKL Trigger: CAGTTTTGAAGGGCTCGTTCAGTTGCGGCATCTGTG...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAAGCTTGAAAGGTTGGTaGATGCGAAGTCGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQSLKGW*MRSRGC Trigger: GCATCCCCGACTTCGCATTCACCAACCTTTCAAGCT...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTTTGATTACGCTGCAATaGAATTTCTTCCAATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPLITLQ*NFFQCT Trigger: CGTGCATTGGAAGAAATTTCATTGCAGCGTAATCAA...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAGCAAAAGCTCCACTGTaGATTTCACGAATCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGAKAPL*ISRIRF Trigger: AAACCTGATTCGTGAAATTCACAGTGGAGCTTTTGC...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGCCCACAAGTTTAAGTTaGTTGAGCCCATTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQPTSLS*LSPFRP Trigger: AGGCCTGAATGGGCTCAATCAACTTAAACTTGTGGG...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAGTCACACCCCCAAAATaGACAACACTGATAAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGVTPPK*TTLISI Trigger: TATGCTTATCAGTGTTGTGCATTTTGGGGGTGTGAC...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGCTTCACTTTCAGCAGTaGTGGTGGCATTTGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQLHFQQ*WWHLLH Trigger: ATGCAGCAAATGCCACCAGCACTGCTGAAAGTGAAG...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTACTGTCGGAGGTGACTaGTTTTCCCATTTTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPTVGGD*FSHFSL Trigger: TAATGAAAAATGGGAAAAGCAGTCACCTCCGACAGT...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTGACAAGGCTTTTGGGTaGATAAAAGAAAGGTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPDKAFG*IKERSL Trigger: TAACGACCTTTCTTTTATCCACCCAAAAGCCTTGTC...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGGTCGTCTTTAAACTTTaGGTTGAAGAAAACGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEVVFKL*VEENVQ Trigger: CTGTACGTTTTCTTCAACCCAAAGTTTAAAGACGAC...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGATTGATTACGCTGCAATaGAATTTCTTCCAATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGLITLQ*NFFQCT Trigger: CGTGCATTGGAAGAAATTTCATTGCAGCGTAATCAA...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGGATCAATGGTGCGAATaGGAAAAATGCAACAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQDQWCE*EKCNRA Trigger: TGCCCTGTTGCATTTTTCTCATTCGCACCATTGATC...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAGATCATCAGGTATGCTaGTTATTTTTGTCCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGDHQVC*LFLSLS Trigger: TGACAGGGACAAAAATAAGCAGCATACCTGATGATC...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGTCTTTTGTCACACTGTaGTCTTGGGGGCTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQSFVTL*SWGLLS Trigger: AGATAACAGCCCCCAAGACCACAGTGTGACAAAAGA...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCACTTTCAGCAGTGCTaGTGGCATTTGCTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLHFQQC*WHLLHL Trigger: CAGATGCAGCAAATGCCACCAGCACTGCTGAAAGTG...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGGAAAACGTACAGGACTaGATTCAGGCAAGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLENVQD*IQASRQ Trigger: CTGCCTGCTTGCCTGAATCCAGTCCTGTACGTTTTC...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTGTCGTCTTTAAACTTTaGGTTGAAGAAAACGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPVVFKL*VEENVQ Trigger: CTGTACGTTTTCTTCAACCCAAAGTTTAAAGACGAC...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGAGGTTACCCTGCAAGTaGGAATACATGCCACAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLRLPCK*EYMPQS Trigger: CGACTGTGGCATGTATTCCCACTTGCAGGGTAACCT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| 3UTR CAA 72 bp | TATACTTTAGGCTCCCATTCTTCACAGACTTCTGACTaGAAAAATAAACTGCCACCTTCCTCCTCTTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: YTLGSHSSQTSD*KNKLPPSSSSA Trigger: CGCAGAAGAGGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCCTAAAGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGGGAGGGTTAGGACTTTaGGTTCTTTCAACCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLGGLGL*VLSTQT Trigger: TGTCTGGGTTGAAAGAACTCAAAGTCCTAACCCTCC...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAGGAATCCTCTTCATCTaGATAGTCAGAATGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQGILFI*IVRMGR Trigger: TCGGCCCATTCTGACTATGCAGATGAAGAGGATTCC...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGCTTAAAAGCACCTGTTaGAGGTGTACAATGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQLKSTC*RCTMDD Trigger: ATCATCCATTGTACACCTTCAACAGGTGCTTTTAAG...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAACAGTTTCCCACCAAATaGCAAATTCAGCAAATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQQFPTK*QIQQIG Trigger: GCCGATTTGCTGAATTTGGCATTTGGTGGGAAACTG...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGGGGACTGAGGTAATATaGTTGGCATCTAAGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLGTEVI*LASKRR Trigger: TCTACGCTTAGATGCCAACCATATTACCTCAGTCCC...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGAGCATCTTTTGGTTTTaGCACAGATCATCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQSIFWF*HRSSGM Trigger: CATACCTGATGATCTGTGCCAAAACCAAAAGATGCT...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGGAAATAGAATTACTGTaGAATCCCAGCTCTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQEIELL*NPSSLR Trigger: CCTTAAAGAGCTGGGATTTCACAGTAATTCTATTTC...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGGTCACACCCCCAAAATaGACAACACTGATAAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLVTPPK*TTLISI Trigger: TATGCTTATCAGTGTTGTGCATTTTGGGGGTGTGAC...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR GCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAGCAAGTGGGAATACATaGCACAGTCGTAGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQASGNT*HSRSRN Trigger: ATTTCTACTACGACTGTGGCATGTATTCCCACTTGC...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCACGAATGGCTTCACTaGGTACTGTTTTCAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLHEWLH*VLFSTD Trigger: ATCAGTTGAAAACAGTACCCAGTGAAGCCATTCGTG...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAATTAATCATGCTAGACTaGGAGTTTTCTGACGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQLIMLD*EFSDGS Trigger: AGACCCGTCAGAAAACTCCCAGTCTAGCATGATTAA...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGTTAATCATGCTAGACTaGGAGTTTTCTGACGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLLIMLD*EFSDGS Trigger: AGACCCGTCAGAAAACTCCCAGTCTAGCATGATTAA...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGAGGGATGTTAGGCCTTaGAAAGTAGTTTCCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLRDVRP*KVVSFI Trigger: GATAAAGGAAACTACTTTTCAAGGCCTAACATCCCT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR TCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCTTAAAAGCACCTGTTaGAGGTGTACAATGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLLKSTC*RCTMDD Trigger: ATCATCCATTGTACACCTTCAACAGGTGCTTTTAAG...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAAAGGCATCTTTCAGCTaGAAGTTACCCACAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQKASFS*KLPTSL Trigger: TAAACTTGTGGGTAACTTCCAGCTGAAAGATGCCTT...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CCA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGGGATTATCATACAAATaGATAGTTCTTAGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DNFNKFGNVRAASDIRTLGLSYK*IVLSSG Trigger: TCCACTGCTAAGAACTATCCATTTGTATGATAATCC...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | TCAACCCCTTCCCGGAGCAGTCCACCCGACGGTCGCCGTCGCAGCTaGAGGGCGCAGCGCAGAGAGGTGGCGCCGCGCCGCTGGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: STPSRSSPPDGRRRS*RAQRREVAPRRWAR Trigger: CCGGGCCCAGCGGCGCGGCGCCACCTCTCTGCGCTGCGCCCTGCAGCTGCGACGGCGACCGTCGGGTGGACTGCTCCGGGAAGGGGTTGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | TGCAGAATATTGCCCTCCGTGAAAAAGGGGGAAGCAGCCTGCTATTaGAGCACCCAGCAAAGCTACGAGGGCAGCCACCTGGAACTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: CRILPSVKKGEAACY*STQQSYEGSHLELS Trigger: CGACAGTTCCAGGTGGCTGCCCTCGTAGCTTTGCTGGGTGCTGCAATAGCAGGCTGCTTCCCCCTTTTTCACGGAGGGCAATATTCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 90 bp | GTCAGAATGGGCCGACTGTGTGCCACAATCAGACCAGTAGGCCTCTaGCCTCTGGCAAGAGGCCACTGTCAATACAGGACAACTGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VRMGRLCATIRPVGL*PLARGHCQYRTTVR Trigger: TCGCACAGTTGTCCTGTATTGACAGTGGCCTCTTGCCAGAGGCCAGAGGCCTACTGGTCTGATTGTGGCACACAGTCGGCCCATTCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | CCAGAGACCCAGCTACCTTGCAGCCGCTGCCAGTTTCCCACCAAATaGCAAATTCAGCAAATCGGCCCCAGGACACAGCATCAAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PETQLPCSRCQFPTK*QIQQIGPRTQHQEK Trigger: CTTTTCTTGATGCTGTGTCCTGGGGCCGATTTGCTGAATTTGGCATTTGGTGGGAAACTGGCAGCGGCTGCAAGGTAGCTGGGTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | CAAAGGAATCCTCTTCATCTGCATAGTCAGAATGGGCCGACTGTGTaGCACAATCAGACCAGTAGGCCTCTGGCCTCTGGCAAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRNPLHLHSQNGPTV*HNQTSRPLASGKRP Trigger: TGGCCTCTTGCCAGAGGCCAGAGGCCTACTGGTCTGATTGTGGCACACAGTCGGCCCATTCTGACTATGCAGATGAAGAGGATTCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 90 bp | GGCACTTCCGTCAAGATGTTGTCATCCAGCCACAGATGCCGCAACTaGACGAGCCCTTCAAAACTGTCCTCCGGGACTGAGGTAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: GTSVKMLSSSHRCRN*TSPSKLSSGTEVIW Trigger: CCATATTACCTCAGTCCCGGAGGACAGTTTTGAAGGGCTCGTTCAGTTGCGGCATCTGTGGCTGGATGACAACATCTTGACGGAAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | GTTAGACTCTCCAGATGGACAGTTCCGGCCAGATTGGGGAACCACTaGACCAGGCTTGCACCACGAATGACTAAGGAATGCAGATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRLSRWTVPARLGNH*TRLAPRMTKECRSD Trigger: GTCTGATCTGCATTCCTTAGTCATTCGTGGTGCAAGCCTGGTGCAGTGGTTCCCCAATCTGGCCGGAACTGTCCATCTGGAGAGTCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | CACAGCAGTCACAGACAGTCAGGTTACCCTGCAAGTGGGAATACATaGCACAGTCGTAGTAGAAATCCTGTTCCCCACAACCGCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSSHRQSGYPASGNT*HSRSRNPVPHNRLG Trigger: GCCAAGGCGGTTGTGGGGAACAGGATTTCTACTACGACTGTGGCATGTATTCCCACTTGCAGGGTAACCTGACTGTCTGTGACTGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGACTGATATCCAGTGCTaGGGTGAAGGCGCTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NQPFAVSLCSVLRLSNTETDIQC*GEGAEP Trigger: GGGCTCAGCGCCTTCACCCAAGCACTGGATATCAGT...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046548.14 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGATGCTTGAGATGTTGTaGAGAGCCAAGGTCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QPFAVSLCSVLRLSNTERMLEML*RAKVSA Trigger: GGCGCTGACCTTGGCTCTCAACAACATCTCAAGCAT...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAGGGATGCTTGAGATGTaGTTGAGAGCCAAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPCALCCDCQTLRGESLGGMLEM*LRAKVS Trigger: GCTGACCTTGGCTCTCAACAACATCTCAAGCATCCC...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 90 bp | GTAGGAAATGGCAAGCACAAGGGTGATGCAGAATATTGCCCTCCGTaGAAAAGGGGGAAGCAGCCTGCTATTGCAGCACCCAGCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGNGKHKGDAEYCPP*KRGKQPAIAAPSKA Trigger: AGCTTTGCTGGGTGCTGCAATAGCAGGCTGCTTCCCCCTTTTTCACGGAGGGCAATATTCTGCATCACCCTTGTGCTTGCCATTTCCTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | CTGCACCTGGTCAGAGCTGTCCGAGACAAAGGAATCCTCTTCATCTaGATAGTCAGAATGGGCCGACTGTGTGCCACAATCAGACCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHLVRAVRDKGILFI*IVRMGRLCATIRPV Trigger: TACTGGTCTGATTGTGGCACACAGTCGGCCCATTCTGACTATGCAGATGAAGAGGATTCCTTTGTCTCGGACAGCTCTGACCAGGTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 90 bp | CCTGGTGACACGCCGCTTCAGGAGCTTCCAGTCGTCTTTAAACTTTaGGTTGAAGAAAACGTACAGGACTGGATTCAGGCAAGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGDTPLQELPVVFKL*VEENVQDWIQASRQ Trigger: CTGCCTGCTTGCCTGAATCCAGTCCTGTACGTTTTCTTCAACCCAAAGTTTAAAGACGACTGGAAGCTCCTGAAGCGGCGTGTCACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAAGAGACCCAGCTACCTaGCAGCCGCTGCCAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGRDPAT*QPLPVS Trigger: GGAAACTGGCAGCGGCTGCAAGGTAGCTGGGTCTCT...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGGGAAGCAGCCTGCTATaGCAGCACCCAGCAAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NQPFAVSLCSVLRLSNTEGSSLL*QHPAKL Trigger: TAGCTTTGCTGGGTGCTGCAATAGCAGGCTGCTTCC...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAAGTCCGCAGCATCTTTaGGTTTTGGCACAGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: CPCALCCDCQTLRGESLGSPQHL*VLAQII Trigger: GATGATCTGTGCCAAAACCAAAAGATGCTGCGGACT...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | TGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGGGAATCACTGGGAACCCACAAGTTTAAGTaGATTGAGCCCATTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPCALCCDCQTLRGESLGTHKFK*IEPIQA Trigger: GGCCTGAATGGGCTCAATCAACTTAAACTTGTGGGT...TCCCAGTGATTCCCCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGAGGCAGCATCTTTTGGTTTaGGCACAGATCATCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QPFAVSLCSVLRLSNTERQHLLV*AQIIRY Trigger: ATACCTGATGATCTGTGCCAAAACCAAAAGATGCTG...CCTCTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 90 bp | GGTTGGCATCTAAGCGTAGAGACTGCAAAGCACTCAGTCCACGAATaGCTTCACTGGGTACTGTTTTCAACTGATTGTTCTGGAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GWHLSVETAKHSVHE*LHWVLFSTDCSGGL Trigger: TAACCCTCCAGAACAATCAGTTGAAAACAGTACCCAGTGAAGCCATTCGTGGACTGAGTGCTTTGCAGTCTCTACGCTTAGATGCCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCACTTCCGTCAAGATGTaGTCATCCAGCCACAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSTSVKM*SSSHRC Trigger: GCATCTGTGGCTGGATGACAACATCTTGACGGAAGT...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCTGTCACACTGTGGTCTaGGGGGCTGTTATCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSCHTVV*GAVIFC Trigger: ACAGAAGATAACAGCCCCCAAGACCACAGTGTGACA...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAAGAGACCCAGCTACCTaGCAGCCGCTGCCAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQRDPAT*QPLPVS Trigger: GGAAACTGGCAGCGGCTGCAAGGTAGCTGGGTCTCT...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGGGAAGCAGCCTGCTATaGCAGCACCCAGCAAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQGSSLL*QHPAKL Trigger: TAGCTTTGCTGGGTGCTGCAATAGCAGGCTGCTTCC...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 90 bp | CCCAAAATGCACAACACTGATAAGCATATGGTACTGATAGAGACCTaGGATTGGCAAAGTCTCTGGCTGCCAAGGCATCTTTCAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PKMHNTDKHMVLIET*DWQSLWLPRHLSAG Trigger: TCCAGCTGAAAGATGCCTTGGCAGCCAGAGACTTTGCCAATCTCAGGTCTCTATCAGTACCATATGCTTATCAGTGTTGTGCATTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | TATTTGGCTATGTTCTTCACTTTCAGCAGTGCTGGTGGCATTTGCTaGATCTGTAGCACCTTTCTCTTTTGTCACACTGTGGTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YLAMFFTFSSAGGIC*ICSTFLFCHTVVLG Trigger: CCCCAAGACCACAGTGTGACAAAAGAGAAAGGTGCTACAGATGCAGCAAATGCCACCAGCACTGCTGAAAGTGAAGAACATAGCCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | ACAGGGCAGAAGAAGATGCAGTTTGTGAAGATGAGCCAAGCAACGTaGTTAATCATGCTAGACTGGGAGTTTTCTGACGGGTCTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TGQKKMQFVKMSQAT*LIMLDWEFSDGSSF Trigger: GAAAGAAGACCCGTCAGAAAACTCCCAGTCTAGCATGATTAAGCACGTTGCTTGGCTCATCTTCACAAACTGCATCTTCTTCTGCCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 90 bp | CTTCCAGTCGTCTTTAAACTTTGGGTTGAAGAAAACGTACAGGACTaGATTCAGGCAAGCAGGCAGCGGGAAGAATATCAGCGTAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPVVFKLWVEENVQD*IQASRQREEYQRNR Trigger: TCTGTTACGCTGATATTCTTCCCGCTGCCTGCTTGCCTGAATCCAGTCCTGTACGTTTTCTTCAACCCAAAGTTTAAAGACGACTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 90 bp | AGGGTTAGGACTTTGAGTTCTTTCAACCCAGACAAGGCTTTTGGGTaGATAAAAGAAAGGTCGTTACCAGCCAGTTGTAGTGCTTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVRTLSSFNPDKAFG*IKERSLPASCSAWV Trigger: CACCCAAGCACTACAACTGGCTGGTAACGACCTTTCTTTTATCCACCCAAAAGCCTTGTCTGGGTTGAAAGAACTCAAAGTCCTAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCTGGAGGGTTAGGACTTaGAGTTCTTTCAACCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSWRVRT*SSFNPD Trigger: GTCTGGGTTGAAAGAACTCAAAGTCCTAACCCTCCA...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGAACCCACAAGTTTAAGTaGATTGAGCCCATTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGTHKFK*IEPIQA Trigger: GGCCTGAATGGGCTCAATCAACTTAAACTTGTGGGT...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | AATCAGCCTTTTGCTGTGTCCCTGTGCTCTGTGCTGCGATTGTCAAACACTGAGTGCACGATACTGGTTTaGTCAGAAGAAATGACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NQPFAVSLCSVLRLSNTECTILV*SEEMTH Trigger: GTGAGTCATTTCTTCTGACAAAACCAGTATCGTGCA...CTCAGTGTTTGACAATCGCAGCACAGAGCACAGGGACACAGCAAAAGGCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 90 bp | CATTATCTCGGGGCTGATGGAGATTGCCGTGATCAATGGTGCGAATaGGAAAAATGCAACAGGGCAGAAGAAGATGCAGTTTGTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HYLGADGDCRDQWCE*EKCNRAEEDAVCED Trigger: ATCTTCACAAACTGCATCTTCTTCTGCCCTGTTGCATTTTTCTCATTCGCACCATTGATCACGGCAATCTCCATCAGCCCCGAGATAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 90 bp | AGGGTTAGGACTTTGAGTTCTTTCAACCCAGACAAGGCTTTTGGGTaGATAAAAGAAAGGTCGTTACCAGCCAGTTGTAGCTCCTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVRTLSSFNPDKAFG*IKERSLPASCSSSR Trigger: TCTAGAGGAGCTACAACTGGCTGGTAACGACCTTTCTTTTATCCACCCAAAAGCCTTGTCTGGGTTGAAAGAACTCAAAGTCCTAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046548.14 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCATTCTTCACAGACTTCTGACTTGAAAAATAAACTGCCACCTTCCTCCACTGAGGTAATATGGTaGGCATCTAAGCGTAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSHSSQTSDLKNKLPPSSTEVIW*ASKRRD Trigger: GTCTCTACGCTTAGATGCCAACCATATTACCTCAGT...GGAGGAAGGTGGCAGTTTATTTTTCAAGTCAGAAGTCTGTGAAGAATGGGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTGTATGCTGCTTATTTTaGTCCCTGTCAAGGTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPVCCLF*SLSRLD Trigger: GTCTAACCTTGACAGGGACAAAAATAAGCAGCATAC...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGAAGCCTATGAAGAGCTaGGAGGCAGGCAGTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQKPMKS*EAGSDE Trigger: TTCATCACTGCCTGCCTCCAAGCTCTTCATAGGCTT...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 90 bp | GATTATTTGGCTATGTTCTTCACTTTCAGCAGTGCTGGTGGCATTTaGTGCATCTGTAGCACCTTTCTCTTTTGTCACACTGTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DYLAMFFTFSSAGGI*CICSTFLFCHTVVL Trigger: CAAGACCACAGTGTGACAAAAGAGAAAGGTGCTACAGATGCAGCAAATGCCACCAGCACTGCTGAAAGTGAAGAACATAGCCAAATAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 90 bp | CAGGGCTTAAAAGCACCTGTTGAAGGTGTACAATGGATGATTATTTaGCTATGTTCTTCACTTTCAGCAGTGCTGGTGGCATTTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGLKAPVEGVQWMII*LCSSLSAVLVAFAA Trigger: TGCAGCAAATGCCACCAGCACTGCTGAAAGTGAAGAACATAGCCAAATAATCATCCATTGTACACCTTCAACAGGTGCTTTTAAGCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | ACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGCCAGTGGAGGGTTAGGACTTaGAGTTCTTTCAACCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TSTNLEMSEQPVTLGHCQWRVRT*SSFNPD Trigger: GTCTGGGTTGAAAGAACTCAAAGTCCTAACCCTCCA...CTGGCAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGATGCTTGAGATGTTGTaGAGAGCCAAGGTCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DNFNKFGNVRAASDIRTLMLEML*RAKVSA Trigger: GGCGCTGACCTTGGCTCTCAACAACATCTCAAGCAT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGGGGATGCTTGAGATGTaGTTGAGAGCCAAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DNFNKFGNVRAASDIRTLGMLEM*LRAKVS Trigger: GCTGACCTTGGCTCTCAACAACATCTCAAGCATCCC...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGACCAAGCTTGAAAGGTaGGTGAATGCGAAGTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DNFNKFGNVRAASDIRTLTKLER*VNAKSG Trigger: CCCCGACTTCGCATTCACCAACCTTTCAAGCTTGGT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAAACCAAGCTTGAAAGGTaGGTGAATGCGAAGTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQTKLER*VNAKSG Trigger: CCCCGACTTCGCATTCACCAACCTTTCAAGCTTGGT...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | AGGACATTGCCAGTCCAGATGAGGACATTACTTAGAGCCATCAAATCCCTTGGATGCACGATACTGGTTTaGTCAGAAGAAATGACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RTLPVQMRTLLRAIKSLGCTILV*SEEMTH Trigger: GTGAGTCATTTCTTCTGACAAAACCAGTATCGTGCA...TCCAAGGGATTTGATGGCTCTAAGTAATGTCCTCATCTGGACTGGCAATGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 90 bp | AGGCTTGCACCACGAATGACTAAGGAATGCAGATCAGACAGGTTGTaGAATGCTGAGTTCCCCACAAAAGACAGAGGATTATCATACAAA | + |
|
Preference number: 5 (lower is better) Translates to: RLAPRMTKECRSDRL*NAEFPTKDRGLSYK Trigger: TTTGTATGATAATCCTCTGTCTTTTGTGGGGAACTCAGCATTTCACAACCTGTCTGATCTGCATTCCTTAGTCATTCGTGGTGCAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGACTTCCGTCAAGATGTaGTCATCCAGCCACAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: DNFNKFGNVRAASDIRTLTSVKM*SSSHRC Trigger: GCATCTGTGGCTGGATGACAACATCTTGACGGAAGT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAATGTCACACTGTGGTCTaGGGGGCTGTTATCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQCHTVV*GAVIFC Trigger: ACAGAAGATAACAGCCCCCAAGACCACAGTGTGACA...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGAAGCCTATGAAGAGCTaGGAGGCAGGCAGTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: DNFNKFGNVRAASDIRTLKPMKS*EAGSDE Trigger: TTCATCACTGCCTGCCTCCAAGCTCTTCATAGGCTT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | CAGTGGTACTTACTACTCAGTCACCTCTACTTAAACCCACGTGGCAATCAGCCTTCTTTAAACTTTGGGTaGAAGAAAACGTACAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: QWYLLLSHLYLNPRGNQPSLNFG*KKTYRT Trigger: AGTCCTGTACGTTTTCTTCAACCCAAAGTTTAAAGA...AGGCTGATTGCCACGTGGGTTTAAGTAGAGGTGACTGAGTAGTAAGTACCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 90 bp | ACATCCAGGTTAGTAATTGTCCCAAGCTTCGCAAAAGCTCCACTGTaGATTTCACGAATCAGGTTTCTACTCAGATCTAGAATCCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSRLVIVPSFAKAPL*ISRIRFLLRSRILR Trigger: CCTAAGGATTCTAGATCTGAGTAGAAACCTGATTCGTGAAATTCACAGTGGAGCTTTTGCGAAGCTTGGGACAATTACTAACCTGGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGACTGAGGTAATATGGTaGGCATCTAAGCGTAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DNFNKFGNVRAASDIRTLTEVIW*ASKRRD Trigger: GTCTCTACGCTTAGATGCCAACCATATTACCTCAGT...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | GATAACTTCAACAAATTTGGAAATGTCAGAGCAGCCAGTGACATTAGGACATTGGTATGCTGCTTATTTTaGTCCCTGTCAAGGTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DNFNKFGNVRAASDIRTLVCCLF*SLSRLD Trigger: GTCTAACCTTGACAGGGACAAAAATAAGCAGCATAC...CAATGTCCTAATGTCACTGGCTGCTCTGACATTTCCAAATTTGTTGAAGTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS-3UTR CAA 90 bp | TCGCATTTATTTCCAATAGAGCATACACTGCTGGGGCATCACAATGTTTTTCAACAGCATCTTTTGGTTTaGGCACAGATCATCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SHLFPIEHTLLGHHNVFQQHLLV*AQIIRY Trigger: ATACCTGATGATCTGTGCCAAAACCAAAAGATGCTG...TTGAAAAACATTGTGATGCCCCAGCAGTGTATGCTCTATTGGAAATAAATGCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | TCCCGGAGCAGTCCACCCGACGGTCGCCGTCGCAGCTaGAGGGCGCAGCGCAGAGAGGTGGCGCCGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSPPDGRRRS*RAQRREVAPRR Trigger: GCGGCGCGGCGCCACCTCTCTGCGCTGCGCCCTGCAGCTGCGACGGCGACCGTCGGGTGGACTGCTCCGGGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 72 bp | GAGCCAAGGTCAGCGCCTGCAGGGTTGGCAGGTTGCTaGGCGGACGCACAGGCACTTCCGTCAAGATGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: EPRSAPAGLAGC*ADAQALPSRCC Trigger: ACAACATCTTGACGGAAGTGCCTGTGCGTCCGCTCAGCAACCTGCCAACCCTGCAGGCGCTGACCTTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 72 bp | GATGTTGTTGAGAGCCAAGGTCAGCGCCTGCAGGGTTaGCAGGTTGCTGAGCGGACGCACAGGCACTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: DVVESQGQRLQG*QVAERTHRHFR Trigger: ACGGAAGTGCCTGTGCGTCCGCTCAGCAACCTGCCAACCCTGCAGGCGCTGACCTTGGCTCTCAACAACATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CAA 72 bp | TTGAGAGCCAAGGTCAGCGCCTGCAGGGTTGGCAGGTaGCTGAGCGGACGCACAGGCACTTCCGTCAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LRAKVSACRVGR*LSGRTGTSVKM Trigger: CATCTTGACGGAAGTGCCTGTGCGTCCGCTCAGCAACCTGCCAACCCTGCAGGCGCTGACCTTGGCTCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | ATGCTTGAGATGTTGTTGAGAGCCAAGGTCAGCGCCTaGAGGGTTGGCAGGTTGCTGAGCGGACGCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MLEMLLRAKVSA*RVGRLLSGRTG Trigger: GCCTGTGCGTCCGCTCAGCAACCTGCCAACCCTGCAGGCGCTGACCTTGGCTCTCAACAACATCTCAAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CAA 90 bp | GAGATGTTGTTGAGAGCCAAGGTCAGCGCCTGCAGGGTTGGCAGGTaGCTGAGCGGACGCACAGGCACTTCCGTCAAGATGTTGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: EMLLRAKVSACRVGR*LSGRTGTSVKMLSS Trigger: GGATGACAACATCTTGACGGAAGTGCCTGTGCGTCCGCTCAGCAACCTGCCAACCCTGCAGGCGCTGACCTTGGCTCTCAACAACATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CCA 72 bp | GGCCGACTGTGTGCCACAATCAGACCAGTAGGCCTCTaGCCTCTGGCAAGAGGCCACTGTCAATACAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GRLCATIRPVGL*PLARGHCQYRT Trigger: TGTCCTGTATTGACAGTGGCCTCTTGCCAGAGGCCAGAGGCCTACTGGTCTGATTGTGGCACACAGTCGGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CAA 72 bp | ATTGCCCTCCGTGAAAAAGGGGGAAGCAGCCTGCTATaGCAGCACCCAGCAAAGCTACGAGGGCAGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: IALREKGGSSLL*QHPAKLRGQPP Trigger: AGGTGGCTGCCCTCGTAGCTTTGCTGGGTGCTGCAATAGCAGGCTGCTTCCCCCTTTTTCACGGAGGGCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | CCTCTTCATCTGCATAGTCAGAATGGGCCGACTGTGTaGCACAATCAGACCAGTAGGCCTCTGGCCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLHLHSQNGPTV*HNQTSRPLASG Trigger: GCCAGAGGCCAGAGGCCTACTGGTCTGATTGTGGCACACAGTCGGCCCATTCTGACTATGCAGATGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CAA 90 bp | ATGCAGAATATTGCCCTCCGTGAAAAAGGGGGAAGCAGCCTGCTATaGCAGCACCCAGCAAAGCTACGAGGGCAGCCACCTGGAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: MQNIALREKGGSSLL*QHPAKLRGQPPGTV Trigger: GACAGTTCCAGGTGGCTGCCCTCGTAGCTTTGCTGGGTGCTGCAATAGCAGGCTGCTTCCCCCTTTTTCACGGAGGGCAATATTCTGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | TCCAGATGGACAGTTCCGGCCAGATTGGGGAACCACTaGACCAGGCTTGCACCACGAATGACTAAGGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: SRWTVPARLGNH*TRLAPRMTKEC Trigger: GCATTCCTTAGTCATTCGTGGTGCAAGCCTGGTGCAGTGGTTCCCCAATCTGGCCGGAACTGTCCATCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | CAGCTACCTTGCAGCCGCTGCCAGTTTCCCACCAAATaGCAAATTCAGCAAATCGGCCCCAGGACACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QLPCSRCQFPTK*QIQQIGPRTQH Trigger: ATGCTGTGTCCTGGGGCCGATTTGCTGAATTTGGCATTTGGTGGGAAACTGGCAGCGGCTGCAAGGTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | AGAATATTGCCCTCCGTGAAAAAGGGGGAAGCAGCCTaGTATTGCAGCACCCAGCAAAGCTACGAGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RILPSVKKGEAA*YCSTQQSYEGS Trigger: GCTGCCCTCGTAGCTTTGCTGGGTGCTGCAATAGCAGGCTGCTTCCCCCTTTTTCACGGAGGGCAATATTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CAA 72 bp | AAGGTTAGACTCTCCAGATGGACAGTTCCGGCCAGATaGGGGAACCACTGCACCAGGCTTGCACCACGAATG | + |
|
Preference number: 6 (lower is better) Translates to: KVRLSRWTVPAR*GNHCTRLAPRM Trigger: CATTCGTGGTGCAAGCCTGGTGCAGTGGTTCCCCAATCTGGCCGGAACTGTCCATCTGGAGAGTCTAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CAA 90 bp | GTCCCTGTCAAGGTTAGACTCTCCAGATGGACAGTTCCGGCCAGATaGGGGAACCACTGCACCAGGCTTGCACCACGAATGACTAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPVKVRLSRWTVPAR*GNHCTRLAPRMTKE Trigger: TTCCTTAGTCATTCGTGGTGCAAGCCTGGTGCAGTGGTTCCCCAATCTGGCCGGAACTGTCCATCTGGAGAGTCTAACCTTGACAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 72 bp | GTCAAGATGTTGTCATCCAGCCACAGATGCCGCAACTaGACGAGCCCTTCAAAACTGTCCTCCGGGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VKMLSSSHRCRN*TSPSKLSSGTE Trigger: CTCAGTCCCGGAGGACAGTTTTGAAGGGCTCGTTCAGTTGCGGCATCTGTGGCTGGATGACAACATCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS CAA 90 bp | GTGACACGCCGCTTCAGGAGCTTCCAGTCGTCTTTAAACTTTGGGTaGAAGAAAACGTACAGGACTGGATTCAGGCAAGCAGGCAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTRRFRSFQSSLNFG*KKTYRTGFRQAGSG Trigger: CCCGCTGCCTGCTTGCCTGAATCCAGTCCTGTACGTTTTCTTCAACCCAAAGTTTAAAGACGACTGGAAGCTCCTGAAGCGGCGTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | AGAAGACTGCCAGAGACCCAGCTACCTTGCAGCCGCTaGCAGTTTCCCACCAAATGCCAAATTCAGCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: RRLPETQLPCSR*QFPTKCQIQQI Trigger: GATTTGCTGAATTTGGCATTTGGTGGGAAACTGGCAGCGGCTGCAAGGTAGCTGGGTCTCTGGCAGTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | GTCAGAGCTGTCCGAGACAAAGGAATCCTCTTCATCTaGATAGTCAGAATGGGCCGACTGTGTGCCACAATC | + |
|
Preference number: 6 (lower is better) Translates to: VRAVRDKGILFI*IVRMGRLCATI Trigger: GATTGTGGCACACAGTCGGCCCATTCTGACTATGCAGATGAAGAGGATTCCTTTGTCTCGGACAGCTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 72 bp | GATTGGGGAACCACTGCACCAGGCTTGCACCACGAATaGCTAAGGAATGCAGATCAGACAGGTTGTGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: DWGTTAPGLHHE*LRNADQTGCEM Trigger: CATTTCACAACCTGTCTGATCTGCATTCCTTAGTCATTCGTGGTGCAAGCCTGGTGCAGTGGTTCCCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS TCA 72 bp | TGGTGTCTCTCCTGTAGGAAATGGCAAGCACAAGGGTaGTGCAGAATATTGCCCTCCGTGAAAAAGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WCLSCRKWQAQG*CRILPSVKKGE Trigger: TTCCCCCTTTTTCACGGAGGGCAATATTCTGCATCACCCTTGTGCTTGCCATTTCCTACAGGAGAGACACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
||
| CDS GCA 72 bp | CACAGACAGTCAGGTTACCCTGCAAGTGGGAATACATaGCACAGTCGTAGTAGAAATCCTGTTCCCCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: HRQSGYPASGNT*HSRSRNPVPHN Trigger: GTTGTGGGGAACAGGATTTCTACTACGACTGTGGCATGTATTCCCACTTGCAGGGTAACCTGACTGTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS TCA 72 bp | GGGGCTGATGGAGATTGCCGTGATCAATGGTGCGAATaGGAAAAATGCAACAGGGCAGAAGAAGATGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: GADGDCRDQWCE*EKCNRAEEDAV Trigger: AACTGCATCTTCTTCTGCCCTGTTGCATTTTTCTCATTCGCACCATTGATCACGGCAATCTCCATCAGCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CCA 72 bp | ACGCCGCTTCAGGAGCTTCCAGTCGTCTTTAAACTTTaGGTTGAAGAAAACGTACAGGACTGGATTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TPLQELPVVFKL*VEENVQDWIQA Trigger: TGCCTGAATCCAGTCCTGTACGTTTTCTTCAACCCAAAGTTTAAAGACGACTGGAAGCTCCTGAAGCGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CAA 72 bp | CCTTCAAAACTGTCCTCCGGGACTGAGGTAATATGGTaGGCATCTAAGCGTAGAGACTGCAAAGCACTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PSKLSSGTEVIW*ASKRRDCKALS Trigger: ACTGAGTGCTTTGCAGTCTCTACGCTTAGATGCCAACCATATTACCTCAGTCCCGGAGGACAGTTTTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CCA 72 bp | GAGACTGCAAAGCACTCAGTCCACGAATGGCTTCACTaGGTACTGTTTTCAACTGATTGTTCTGGAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: ETAKHSVHEWLH*VLFSTDCSGGL Trigger: TAACCCTCCAGAACAATCAGTTGAAAACAGTACCCAGTGAAGCCATTCGTGGACTGAGTGCTTTGCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CAA 72 bp | CGCTTCAGGAGCTTCCAGTCGTCTTTAAACTTTGGGTaGAAGAAAACGTACAGGACTGGATTCAGGCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RFRSFQSSLNFG*KKTYRTGFRQA Trigger: TGCTTGCCTGAATCCAGTCCTGTACGTTTTCTTCAACCCAAAGTTTAAAGACGACTGGAAGCTCCTGAAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS TCA 72 bp | GCATCTTTCAGCTGGAAGTTACCCACAAGTTTAAGTTaGTTGAGCCCATTCAGGCCTTCCGTAGGAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: ASFSWKLPTSLS*LSPFRPSVGNE Trigger: CTCATTTCCTACGGAAGGCCTGAATGGGCTCAATCAACTTAAACTTGTGGGTAACTTCCAGCTGAAAGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS TCA 72 bp | CACAACACTGATAAGCATATGGTACTGATAGAGACCTaGGATTGGCAAAGTCTCTGGCTGCCAAGGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: HNTDKHMVLIET*DWQSLWLPRHL Trigger: AAGATGCCTTGGCAGCCAGAGACTTTGCCAATCTCAGGTCTCTATCAGTACCATATGCTTATCAGTGTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS GCA 72 bp | ATGTTCTTCACTTTCAGCAGTGCTGGTGGCATTTGCTaGATCTGTAGCACCTTTCTCTTTTGTCACACTGTG | + |
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Preference number: 6 (lower is better) Translates to: MFFTFSSAGGIC*ICSTFLFCHTV Trigger: CACAGTGTGACAAAAGAGAAAGGTGCTACAGATGCAGCAAATGCCACCAGCACTGCTGAAAGTGAAGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS GCA 72 bp | GCTATGTTCTTCACTTTCAGCAGTGCTGGTGGCATTTaGTGCATCTGTAGCACCTTTCTCTTTTGTCACACT | + |
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Preference number: 6 (lower is better) Translates to: AMFFTFSSAGGI*CICSTFLFCHT Trigger: AGTGTGACAAAAGAGAAAGGTGCTACAGATGCAGCAAATGCCACCAGCACTGCTGAAAGTGAAGAACATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CCA 72 bp | CTAAGCGTAGAGACTGCAAAGCACTCAGTCCACGAATaGCTTCACTGGGTACTGTTTTCAACTGATTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSVETAKHSVHE*LHWVLFSTDCS Trigger: AGAACAATCAGTTGAAAACAGTACCCAGTGAAGCCATTCGTGGACTGAGTGCTTTGCAGTCTCTACGCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CAA 72 bp | GGTTTTGGCACAGATCATCAGGTATGCTGCTTATTTTaGTCCCTGTCAAGGTTAGACTCTCCAGATGGACAG | + |
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Preference number: 6 (lower is better) Translates to: GFGTDHQVCCLF*SLSRLDSPDGQ Trigger: CTGTCCATCTGGAGAGTCTAACCTTGACAGGGACAAAAATAAGCAGCATACCTGATGATCTGTGCCAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS TCA 72 bp | CCACGAATGACTAAGGAATGCAGATCAGACAGGTTGTaGAATGCTGAGTTCCCCACAAAAGACAGAGGATTA | + |
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Preference number: 6 (lower is better) Translates to: PRMTKECRSDRL*NAEFPTKDRGL Trigger: TAATCCTCTGTCTTTTGTGGGGAACTCAGCATTTCACAACCTGTCTGATCTGCATTCCTTAGTCATTCGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CCA 72 bp | ACTTTGAGTTCTTTCAACCCAGACAAGGCTTTTGGGTaGATAAAAGAAAGGTCGTTACCAGCCAGTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TLSSFNPDKAFG*IKERSLPASCS Trigger: GCTACAACTGGCTGGTAACGACCTTTCTTTTATCCACCCAAAAGCCTTGTCTGGGTTGAAAGAACTCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046548.14 |
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| CDS CCA 72 bp | AAGATGAGCCAAGCAACGTGCTTAATCATGCTAGACTaGGAGTTTTCTGACGGGTCTTCTTTCTCTAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: KMSQATCLIMLD*EFSDGSSFSKL Trigger: CAACTTAGAGAAAGAAGACCCGTCAGAAAACTCCCAGTCTAGCATGATTAAGCACGTTGCTTGGCTCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CAA 72 bp | AGTAAGTTAGACACAGAAATCAAGCCTATGAAGAGCTaGGAGGCAGGCAGTGATGAACAAGACGCAAACACT | + |
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Preference number: 6 (lower is better) Translates to: SKLDTEIKPMKS*EAGSDEQDANT Trigger: AGTGTTTGCGTCTTGTTCATCACTGCCTGCCTCCAAGCTCTTCATAGGCTTGATTTCTGTGTCTAACTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CAA 90 bp | ATGCCCATGAGTAAGTTAGACACAGAAATCAAGCCTATGAAGAGCTaGGAGGCAGGCAGTGATGAACAAGACGCAAACACTGTTAAAATG | + |
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Preference number: 6 (lower is better) Translates to: MPMSKLDTEIKPMKS*EAGSDEQDANTVKM Trigger: CATTTTAACAGTGTTTGCGTCTTGTTCATCACTGCCTGCCTCCAAGCTCTTCATAGGCTTGATTTCTGTGTCTAACTTACTCATGGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CCA 72 bp | GCTGCATCTGTAGCACCTTTCTCTTTTGTCACACTGTaGTCTTGGGGGCTGTTATCTTCTGTGTTTAAATTT | + |
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Preference number: 6 (lower is better) Translates to: AASVAPFSFVTL*SWGLLSSVFKF Trigger: AAATTTAAACACAGAAGATAACAGCCCCCAAGACCACAGTGTGACAAAAGAGAAAGGTGCTACAGATGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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| CDS CCA 72 bp | ACTTTGAGTTCTTTCAACCCAGACAAGGCTTTTGGGTaGATAAAAGAAAGGTCGTTACCAGCCAGTTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: TLSSFNPDKAFG*IKERSLPASCS Trigger: ACTACAACTGGCTGGTAACGACCTTTCTTTTATCCACCCAAAAGCCTTGTCTGGGTTGAAAGAACTCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111037.3 |
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| CDS CAA 72 bp | GTCAATACAGGACAACTGTGCGATTTTATTAAGTGTTaGCACGATACTGGTTTTGTCAGAAGAAATGACTCA | + |
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Preference number: 6 (lower is better) Translates to: VNTGQLCDFIKC*HDTGFVRRNDS Trigger: TGAGTCATTTCTTCTGACAAAACCAGTATCGTGCAAACACTTAATAAAATCGCACAGTTGTCCTGTATTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046548.14 ENSMUST00000111037.3 |
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