Pregenerated sensors for LGMN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021190Ensembl transcript IDs: ENSMUST00000021607.9, ENSMUST00000110020.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGCGGGCAGTATTCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTaGCTCCGCCCTTTCAGTCTCTGGTTGGTTCATATTCCAGTGGAC | + |
|
Preference number: 1 (lower is better) Translates to: WAGSIPGGQGRGCCL*LRPFSLWLVHIPVD Trigger: GTCCACTGGAATATGAACCAACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAATACTGCCCGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTATTCCAGTGGACTGTaGTCACTCATTGGGAAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: IPGGQGRGCCLWLRPFSLYSSGL*SLIGKR Trigger: TCGCTTCCCAATGAGTGAGCACAGTCCACTGGAATA...GAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGTGGTTCATATTCCAGTaGACTGTGCTCACTCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: SWGPGARVLPLAPPFQSLWFIFQ*TVLTHW Trigger: CCAATGAGTGAGCACAGTCCACTGGAATATGAACCA...CAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR CCA 90 bp | GTATTCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTGGTTCATATTCCAGTaGACTGTGCTCACTCATTGG | + |
|
Preference number: 2 (lower is better) Translates to: VFLGARGAGAASGSALSVWFIFQ*TVLTHW Trigger: CCAATGAGTGAGCACAGTCCACTGGAATATGAACCA...GACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTTAGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTACGCCCTTTCAGTCTCTaGTTGGTTCATATTCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSKQVSSKSKPWGGRAVRPFSL*LVHIPV Trigger: CACTGGAATATGAACCAACCAGAGACTGAAAGGGCG...TACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCAAGAGGTTTCTCAAAAAGCAAGCCCTaGGGTGGGCGGGCAGTATTC | + |
|
Preference number: 2 (lower is better) Translates to: LLSTLFFSEITVKTARGFSKSKP*GGRAVF Trigger: GAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGA...GAAACCTCTTGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCAAAGTTCCTTCTTCCAGAGAGCTTTACCCACCCAAACTGGCTTCTTAGTATATTCCAGTGGACTGTaGTCACTCATTGGGAAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: KQSSFFQRALPTQTGFLVYSSGL*SLIGKR Trigger: TCGCTTCCCAATGAGTGAGCACAGTCCACTGGAATA...TACTAAGAAGCCAGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGCGCCCTTTCAGTCTCTaGTTGGTTCATATTCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NNSPIGACFPPSSSVKSLRPFSL*LVHIPV Trigger: CACTGGAATATGAACCAACCAGAGACTGAAAGGGCG...CAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAAAGTTCCTTCTTCCAGAGAGCTTTACCCACCCAAACTGGCTTCTTAGTACTTTCAGTCTCTGGTTaGTTCATATTCCAGTGGACT | + |
|
Preference number: 2 (lower is better) Translates to: KQSSFFQRALPTQTGFLVLSVSG*FIFQWT Trigger: AGTCCACTGGAATATGAACCAACCAGAGACTGAAAG...TACTAAGAAGCCAGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAAAATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAAAAGAGGTTTCAGCTTTaGATTTCTCAGACGATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SKNNSPIGACFPPSSSVKKRFQL*ISQTIP Trigger: AGGAATCGTCTGAGAAATTCAAAGCTGAAACCTCTT...TTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATTTTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR GCA 72 bp | TGGGCGGGCAGTATTCCTGGGGGCCAGGGGCGCGGGTaGTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: WAGSIPGGQGRG*CLWLRPFSLWL Trigger: CAACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAATACTGCCCGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| 3UTR CCA 72 bp | GGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTTaGTTCATATTCCAGTGGACTGTGCTCACTCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: GAASGSALSVSG*FIFQWTVLTHW Trigger: CCAATGAGTGAGCACAGTCCACTGGAATATGAACCAACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTTGGTTCACCCAGCACCAGGCTaGGAAGCACAGCCACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQGRGCCLWLRPFSLWLVHPAPG*EAQPLS Trigger: GGAGAGTGGCTGTGCTTCTCAGCCTGGTGCTGGGTG...AACCAACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGAGCAGTCATGTGCTGTaGGCATGGTCCTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PGGQGRGCCLWLRPFSLWSSHVL*AWSSLT Trigger: TGTCAGAGAGGACCATGCTCACAGCACATGACTGCT...CCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGAGCATGGTCCTCTCTaGCAGATGTCTCTCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SWGPGARVLPLAPPFQSLEHGPL*QMSLSS Trigger: ACTGCTGAGAGACATCTGTCAGAGAGGACCATGCTC...CAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | GTATTCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCGGGAGATGGGGGAACTaGCTCTGTGCTTCATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLGARGAGAASGSALSVGRWGN*LCASFP Trigger: AGGGAATGAAGCACAGAGCCAGTTCCCCCATCTCCC...GACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCGCACAGACTTCTCAATaGCGTGCCTGGCATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPGGQGRGCCLWLRPFSLAQTSQ*RAWHPE Trigger: TTCTGGATGCCAGGCACGTCATTGAGAAGTCTGTGC...GAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTCCTGTCAATCGGATATaGTGCCTCACAGAGATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGARGAGAASGSALSVSGPVNRI*CLTEIG Trigger: GCCAATCTCTGTGAGGCACCATATCCGATTGACAGG...ACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTTGGTTTGTTGGTGTGGGACTTaGCCAGGTGGTACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQGRGCCLWLRPFSLWLVCWCGT*PGGTAC Trigger: ACAAGCAGTACCACCTGGTCAAGTCCCACACCAACA...AACCAACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | CGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTTGGTTCATATTCCACACCCAGCACCAGGCTaGGAAGCACAGCCACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGCCLWLRPFSLWLVHIPHPAPG*EAQPLS Trigger: GGAGAGTGGCTGTGCTTCTCAGCCTGGTGCTGGGTG...TGGAATATGAACCAACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGCATACATCATCACTATaGTCTGCTCGTCAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SWGPGARVLPLAPPFQSLHTSSL*SARQES Trigger: GGATTCCTGACGAGCAGATCATAGTGATGATGTATG...CAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTGCATCCAGAAATTGCTaGATCTGCCCAATGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LGARGAGAASGSALSVSGASRNC*ICPMRF Trigger: GAATCTCATTGGGCAGATCCAGCAATTTCTGGATGC...ACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGACACACTTTGTCCATaGCCATCTCTATCCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SWGPGARVLPLAPPFQSLDTLCP*PSLSCQ Trigger: TTGACAGGATAGAGATGGCCATGGACAAAGTGTGTC...CAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTTGGTTATCATCACTATGATCTaGTCGTCAGGAATCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQGRGCCLWLRPFSLWLVIITMI*SSGIPF Trigger: GAACGGGATTCCTGACGAGCAGATCATAGTGATGAT...AACCAACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | TATTCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTGCATCCAGAAATTGCTaGATCTGCCCAATGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: YSWGPGARVLPLAPPFQSASRNC*ICPMRF Trigger: GAATCTCATTGGGCAGATCCAGCAATTTCTGGATGC...AGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTAGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTAGTAGCAGGCATAAGATaGCTCCTTGGGGTTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSKQVSSKSKPWGGRAVVAGIR*LLGVGR Trigger: GCGGCCAACCCCAAGGAGTCATCTTATGCCTGCTAC...TACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCCTGGGGAGATGGGGGAACTaGCTCTGTGCTTCATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKQVSSKSKPWGGRAVFLGRWGN*LCASFP Trigger: AGGGAATGAAGCACAGAGCCAGTTCCCCCATCTCCC...CAGGAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCGAGCATGGTCCTCTCTaGCAGATGTCTCTCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSKQVSSKSKPWGGRAVFEHGPL*QMSLSS Trigger: ACTGCTGAGAGACATCTGTCAGAGAGGACCATGCTC...GAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCCTGCTTTTCCAGACCCTTTaGCCTTCACAGCTTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SKQVSSKSKPWGGRAVFLLFQTL*PSQLLR Trigger: ACGCAGAAGCTGTGAAGGGCAAAGGGTCTGGAAAAG...CAGGAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | CATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCATGTTGGTGTGGGACTTaGCCAGGTGGTACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRGLLSTLFFSEITVKTACWCGT*PGGTAC Trigger: ACAAGCAGTACCACCTGGTCAAGTCCCACACCAACA...TGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | CATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCAGCACAGACTTCTCAATaGCGTGCCTGGCATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRGLLSTLFFSEITVKTAAQTSQ*RAWHPE Trigger: TTCTGGATGCCAGGCACGTCATTGAGAAGTCTGTGC...TGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | CATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCAAGCAGTCATGTGCTGTaGGCATGGTCCTCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HRGLLSTLFFSEITVKTASSHVL*AWSSLT Trigger: TGTCAGAGAGGACCATGCTCACAGCACATGACTGCT...TGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCCTGGACTTCTCAATGACGTaGCTGGCATCCAGAAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKQVSSKSKPWGGRAVFLDFSMT*LASRNC Trigger: GCAATTTCTGGATGCCAGGCACGTCATTGAGAAGTC...CAGGAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCCTGCATACATCATCACTATaGTCTGCTCGTCAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SKQVSSKSKPWGGRAVFLHTSSL*SARQES Trigger: GGATTCCTGACGAGCAGATCATAGTGATGATGTATG...CAGGAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | AATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGGTAGCAGGCATAAGATaGCTCCTTGGGGTTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NNSPIGACFPPSSSVKSLVAGIR*LLGVGR Trigger: GCGGCCAACCCCAAGGAGTCATCTTATGCCTGCTAC...CAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCATCATCACTATGATCTaGTCGTCAGGAATCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSKQVSSKSKPWGGRAVFIITMI*SSGIPF Trigger: GAACGGGATTCCTGACGAGCAGATCATAGTGATGAT...GAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAAAGTTCCTTCTTCCAGAGAGCTTTACCCACCCAAACTGGCTTCTTAGTAAGGTGGTACTGCTTGTaGAGGGTCTCTTTGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQSSFFQRALPTQTGFLVRWYCL*RVSLVR Trigger: CCTGACCAAAGAGACCCTTCACAAGCAGTACCACCT...TACTAAGAAGCCAGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR GCA 90 bp | AATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGCTGGTAGCAGTCATGTaGTGTGAGCATGGTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NNSPIGACFPPSSSVKSLLVAVM*CEHGPL Trigger: GAGAGGACCATGCTCACAGCACATGACTGCTACCAG...CAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | CATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCAGTTGATCACAACACCTaGGGTAGGGTTTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HRGLLSTLFFSEITVKTAVDHNT*GRVFFR Trigger: TCTGAAGAAAACCCTACCCCAGGTGTTGTGATCAAC...TGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | AAAACTCCTAAGAAGCAAAGTTCCTTCTTCCAGAGAGCTTTACCCACCCAAACTAGGTGGTACTGCTTGTaGAGGGTCTCTTTGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTPKKQSSFFQRALPTQTRWYCL*RVSLVR Trigger: CCTGACCAAAGAGACCCTTCACAAGCAGTACCACCT...AGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTTCTTAGGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAAAGTTCCTTCTTCCAGAGAGCTTTACCCACCCAAACTGGCTTCTTAGTACTTTTCCAGACCCTTTaGCCTTCACAGCTTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KQSSFFQRALPTQTGFLVLFQTL*PSQLLR Trigger: ACGCAGAAGCTGTGAAGGGCAAAGGGTCTGGAAAAG...TACTAAGAAGCCAGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCGGTTTTCTTCAGAGTTaGCAATGTCGTCATACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKQVSSKSKPWGGRAVFGFLQS*QCRHTS Trigger: TGATGTATGACGACATTGCCAACTCTGAAGAAAACC...GAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | AATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGCCTGTCAATCGGATATaGTGCCTCACAGAGATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNSPIGACFPPSSSVKSLPVNRI*CLTEIG Trigger: GCCAATCTCTGTGAGGCACCATATCCGATTGACAGG...CAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | CATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCATTCAGGTCCTTGACATaGAGATCATCATTAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRGLLSTLFFSEITVKTAFRSLT*RSSLGN Trigger: GTTTCCTAATGATGATCTTCATGTCAAGGACCTGAA...TGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGAGAGCTTTACCCACCCAAACTGGCTTCTTAGTAAGCAGGTATCTTCAATGTTCCCATATTGCATaGCATGGCTGGTGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQRALPTQTGFLVSRYLQCSHIA*HGWCWC Trigger: ACACCAACACCAGCCATGTCATGCAATATGGGAACA...TTGAAGATACCTGCTTACTAAGAAGCCAGTTTGGGTGGGTAAAGCTCTCTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAAAATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAACTGGTAGCAGTCATGTaGTGTGAGCATGGTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKNNSPIGACFPPSSSVKLVAVM*CEHGPL Trigger: GAGAGGACCATGCTCACAGCACATGACTGCTACCAG...TTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATTTTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCCTAAGAAGCAAAGTTCCTTCTTCCAGAGAGCTTTACCCACCCAAACTCCATATTGCATGACATaGCTGGTGTTGGTGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTPKKQSSFFQRALPTQTPYCMT*LVLVWD Trigger: GTCCCACACCAACACCAGCCATGTCATGCAATATGG...AGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTTCTTAGGAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | AATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGGTTGATCACAACACCTaGGGTAGGGTTTTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNSPIGACFPPSSSVKSLVDHNT*GRVFFR Trigger: TCTGAAGAAAACCCTACCCCAGGTGTTGTGATCAAC...CAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCAAGAGGTTTCGGTTTTCTTCAGAGTTaGCAATGTCGTCATACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSTLFFSEITVKTARGFGFLQS*QCRHTS Trigger: TGATGTATGACGACATTGCCAACTCTGAAGAAAACC...GAAACCTCTTGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTCCTAAGAAGCAAAGTTCCTTCTTCCAGAGAGCTTTACCCACCCAAACTGACACACTTTGTCCATaGCCATCTCTATCCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTPKKQSSFFQRALPTQTDTLCP*PSLSCQ Trigger: TTGACAGGATAGAGATGGCCATGGACAAAGTGTGTC...AGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTTCTTAGGAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGATGACATGGCTGGTGTaGGTGTGGGACTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGQGRGCCLWLRPFSLWMTWLV*VWDLTR Trigger: CCTGGTCAAGTCCCACACCAACACCAGCCATGTCAT...CCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCTGGTTGGTTATGACATGGCTGGTGTaGGTGTGGGACTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQGRGCCLWLRPFSLWLVMTWLV*VWDLTR Trigger: CCTGGTCAAGTCCCACACCAACACCAGCCATGTCAT...AACCAACCAGAGACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTGGGGGCCAGGGGCGCGGGTGCTGCCTCTGGCTCCGCCCTTTCAGTCTCCTTCAGGACTCCCTaGTATACATCTGTGCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VFLGARGAGAASGSALSVSFRTP*YTSVPL Trigger: TAACGGCACAGATGTATACAAGGGAGTCCTGAAGGA...GACTGAAAGGGCGGAGCCAGAGGCAGCACCCGCGCCCCTGGCCCCCAGGAATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTTAGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTAGTGTTGGTGTGGGACTaGACCAGGTGGTACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSKQVSSKSKPWGGRAVVLVWD*TRWYCL Trigger: CAAGCAGTACCACCTGGTCAAGTCCCACACCAACAC...TACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCCTGCCTGGCATCCAGAAATaGCTGGATCTGCCCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKQVSSKSKPWGGRAVFLPGIQK*LDLPNE Trigger: CTCATTGGGCAGATCCAGCAATTTCTGGATGCCAGG...CAGGAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CCA 90 bp | ACGTGCCTGGCATCCAGAAATTGCTGGATCTGCCCAATGAGATTCTaGGATTCCTTCACGTCGTTGGTTCTCAGCAGCTTCCTCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TCLASRNCWICPMRF*DSFTSLVLSSFLFK Trigger: CTTGAAGAGGAAGCTGCTGAGAACCAACGACGTGAAGGAATCCCAGAATCTCATTGGGCAGATCCAGCAATTTCTGGATGCCAGGCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS GCA 90 bp | ACAGACTTCTCAATGACGTGCCTGGCATCCAGAAATTGCTGGATCTaGCCAATGAGATTCTGGGATTCCTTCACGTCGTTGGTTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDFSMTCLASRNCWI*PMRFWDSFTSLVLS Trigger: GCTGAGAACCAACGACGTGAAGGAATCCCAGAATCTCATTGGGCAGATCCAGCAATTTCTGGATGCCAGGCACGTCATTGAGAAGTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS GCA 90 bp | ACACACTTTGTCCATGGCCATCTCTATCCTGTCAATCGGATATGGTaGCTCACAGAGATTGGCCAGCACATACAAGTACCGCAAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: THFVHGHLYPVNRIW*LTEIGQHIQVPQGM Trigger: CATGCCTTGCGGTACTTGTATGTGCTGGCCAATCTCTGTGAGGCACCATATCCGATTGACAGGATAGAGATGGCCATGGACAAAGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CCA 90 bp | AAGACACACTTTGTCCATGGCCATCTCTATCCTGTCAATCGGATATaGTGCCTCACAGAGATTGGCCAGCACATACAAGTACCGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KTHFVHGHLYPVNRI*CLTEIGQHIQVPQG Trigger: GCCTTGCGGTACTTGTATGTGCTGGCCAATCTCTGTGAGGCACCATATCCGATTGACAGGATAGAGATGGCCATGGACAAAGTGTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCTCCTTCAGGACTCCCTaGTATACATCTGTGCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSKQVSSKSKPWGGRAVFSFRTP*YTSVPL Trigger: TAACGGCACAGATGTATACAAGGGAGTCCTGAAGGA...GAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCGGGTTTTCTTCAGAGTaGGCAATGTCGTCATACATC | + |
|
Preference number: 5 (lower is better) Translates to: LSKQVSSKSKPWGGRAVFGFSSE*AMSSYI Trigger: GATGTATGACGACATTGCCAACTCTGAAGAAAACCC...GAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | CATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCAGGGTTTTCTTCAGAGTaGGCAATGTCGTCATACATC | + |
|
Preference number: 5 (lower is better) Translates to: HRGLLSTLFFSEITVKTAGFSSE*AMSSYI Trigger: GATGTATGACGACATTGCCAACTCTGAAGAAAACCC...TGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | AATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGCCTGGCATCCAGAAATaGCTGGATCTGCCCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: NNSPIGACFPPSSSVKSLPGIQK*LDLPNE Trigger: CTCATTGGGCAGATCCAGCAATTTCTGGATGCCAGG...CAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAGCAGGTATCTTCAAAAAGCAAGCCCTGGGGTGGGCGGGCAGTATTCCTGATGGTAGAGATAGATTaGTTCCCATATTGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: SKQVSSKSKPWGGRAVFLMVEID*FPYCMT Trigger: TGTCATGCAATATGGGAACAAATCTATCTCTACCAT...CAGGAATACTGCCCGCCCACCCCAGGGCTTGCTTTTTGAAGATACCTGCTTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | AATAATTCTCCCATAGGGGCTTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGAGATTTGTTCCCATATaGCATGACATGGCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NNSPIGACFPPSSSVKSLRFVPI*HDMAGV Trigger: AACACCAGCCATGTCATGCAATATGGGAACAAATCT...CAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAAGCCCCTATGGGAGAATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | AAACTCCTAAGAAGCAAAGTTCCTTCTTCCAGAGAGCTTTACCCACCCAAACTGAGATTTGTTCCCATATaGCATGACATGGCTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KLLRSKVPSSRELYPPKLRFVPI*HDMAGV Trigger: AACACCAGCCATGTCATGCAATATGGGAACAAATCT...CAGTTTGGGTGGGTAAAGCTCTCTGGAAGAAGGAACTTTGCTTCTTAGGAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTTTCCACCCTCTTCTTCAGTGAAATCACTGTGAAGACGGCAAGAGGTTTCATGGTAGAGATAGATTaGTTCCCATATTGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: LLSTLFFSEITVKTARGFMVEID*FPYCMT Trigger: TGTCATGCAATATGGGAACAAATCTATCTCTACCAT...GAAACCTCTTGCCGTCTTCACAGTGATTTCACTGAAGAAGAGGGTGGAAAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS GCA 72 bp | CTCGGGGGCCACTCTTCAAGACTTTTCCAGACCCTTTaGCCTTCACAGCTTCTGCGTCACCTCTCAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: LGGHSSRLFQTL*PSQLLRHLSAR Trigger: CCGTGCTGAGAGGTGACGCAGAAGCTGTGAAGGGCAAAGGGTCTGGAAAAGTCTTGAAGAGTGGCCCCCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS TCA 72 bp | GTGTTGGTGTGGGACTTGACCAGGTGGTACTGCTTGTaGAGGGTCTCTTTGGTCAGGTCCTCCACATCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLVWDLTRWYCL*RVSLVRSSTSE Trigger: CTCCGATGTGGAGGACCTGACCAAAGAGACCCTTCACAAGCAGTACCACCTGGTCAAGTCCCACACCAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CCA 72 bp | TTCTGCGTCACCTCTCAGCACGGCGAGGAAATTCTCTaGAGTCACATCCTCTCCGGTGTAGTCCTTCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FCVTSQHGEEIL*SHILSGVVLQD Trigger: GTCCTGAAGGACTACACCGGAGAGGATGTGACTCCAGAGAATTTCCTCGCCGTGCTGAGAGGTGACGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS TCA 72 bp | CTGGTAGCAGTCATGTGCTGTGAGCATGGTCCTCTCTaGCAGATGTCTCTCAGCAGTTTCCCCAAATCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LVAVMCCEHGPL*QMSLSSFPKSR Trigger: GCGGGATTTGGGGAAACTGCTGAGAGACATCTGTCAGAGAGGACCATGCTCACAGCACATGACTGCTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS TCA 72 bp | AGTGGGTTACAGCCTCCTGGTAGCAGTCATGTGCTGTaGGCATGGTCCTCTCTGACAGATGTCTCTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGLQPPGSSHVL*AWSSLTDVSQQ Trigger: CTGCTGAGAGACATCTGTCAGAGAGGACCATGCTCACAGCACATGACTGCTACCAGGAGGCTGTAACCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CAA 90 bp | AATTGCTGGATCTGCCCAATGAGATTCTGGGATTCCTTCACGTCGTaGGTTCTCAGCAGCTTCCTCTTCAAGATGGTCAGGGGCACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NCWICPMRFWDSFTS*VLSSFLFKMVRGTS Trigger: TGACGTGCCCCTGACCATCTTGAAGAGGAAGCTGCTGAGAACCAACGACGTGAAGGAATCCCAGAATCTCATTGGGCAGATCCAGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS GCA 72 bp | GTCCATGGCCATCTCTATCCTGTCAATCGGATATGGTaGCTCACAGAGATTGGCCAGCACATACAAGTACCG | + |
|
Preference number: 6 (lower is better) Translates to: VHGHLYPVNRIW*LTEIGQHIQVP Trigger: CGGTACTTGTATGTGCTGGCCAATCTCTGTGAGGCACCATATCCGATTGACAGGATAGAGATGGCCATGGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS GCA 72 bp | GAGTTGGCAATGTCGTCATACATCATCACTATGATCTaGTCGTCAGGAATCCCGTTCCGGTGGATGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ELAMSSYIITMI*SSGIPFRWMIW Trigger: CCAGATCATCCACCGGAACGGGATTCCTGACGAGCAGATCATAGTGATGATGTATGACGACATTGCCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CAA 72 bp | AGGACTCCCTTGTATACATCTGTGCCGTTAGGTCGGTaGATCACAACACCTGGGGTAGGGTTTTCTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RTPLYTSVPLGR*ITTPGVGFSSE Trigger: CTCTGAAGAAAACCCTACCCCAGGTGTTGTGATCAACCGACCTAACGGCACAGATGTATACAAGGGAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CAA 72 bp | ATCTGCCCAATGAGATTCTGGGATTCCTTCACGTCGTaGGTTCTCAGCAGCTTCCTCTTCAAGATGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ICPMRFWDSFTS*VLSSFLFKMVR Trigger: CCTGACCATCTTGAAGAGGAAGCTGCTGAGAACCAACGACGTGAAGGAATCCCAGAATCTCATTGGGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CCA 72 bp | ATGGTAGAGATAGATTTGTTCCCATATTGCATGACATaGCTGGTGTTGGTGTGGGACTTGACCAGGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: MVEIDLFPYCMT*LVLVWDLTRWY Trigger: GTACCACCTGGTCAAGTCCCACACCAACACCAGCCATGTCATGCAATATGGGAACAAATCTATCTCTACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CCA 72 bp | TTTGTCCATGGCCATCTCTATCCTGTCAATCGGATATaGTGCCTCACAGAGATTGGCCAGCACATACAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: FVHGHLYPVNRI*CLTEIGQHIQV Trigger: TACTTGTATGTGCTGGCCAATCTCTGTGAGGCACCATATCCGATTGACAGGATAGAGATGGCCATGGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CAA 72 bp | TTGATCACAACACCTGGGGTAGGGTTTTCTTCAGAGTaGGCAATGTCGTCATACATCATCACTATGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LITTPGVGFSSE*AMSSYIITMIC Trigger: GCAGATCATAGTGATGATGTATGACGACATTGCCAACTCTGAAGAAAACCCTACCCCAGGTGTTGTGATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||
| CDS CAA 72 bp | CATCACTTTCATGGTAGAGATAGATTTGTTCCCATATaGCATGACATGGCTGGTGTTGGTGTGGGACTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HHFHGRDRFVPI*HDMAGVGVGLD Trigger: GTCAAGTCCCACACCAACACCAGCCATGTCATGCAATATGGGAACAAATCTATCTCTACCATGAAAGTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021607.9 ENSMUST00000110020.8 |
||