Pregenerated sensors for LGI4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036560Ensembl transcript IDs: ENSMUST00000039775.9, ENSMUST00000164725.3, ENSMUST00000169785.8, ENSMUST00000172001.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACTCTGTGTGGAGCTTGGAGTGAGGCTGCGGGCGGCAGGGAGGTaGGCAGATGCTGGGGCAGGCACTGGCATGCAGGAGCTGGTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: RLCVELGVRLRAAGR*ADAGAGTGMQELVA Trigger: AGCCACCAGCTCCTGCATGCCAGTGCCTGCCCCAGCATCTGCCCACCTCCCTGCCGCCCGCAGCCTCACTCCAAGCTCCACACAGAGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 90 bp | CTGATGGAGCAGGGAGAAGAAAGAGTGTCAGCCAGGGCCAGGAGATaGTATGGCCTTGCGGGCGGGTGGGGCTGCCTATGGTGGAGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: LMEQGEERVSARARR*YGLAGGWGCLWWRA Trigger: AGCCCTCCACCATAGGCAGCCCCACCCGCCCGCAAGGCCATAGCATCTCCTGGCCCTGGCTGACACTCTTTCTTCTCCCTGCTCCATCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| 3UTR TCA 90 bp | GTGGGCAGATGCTGGGGCAGGCACTGGCATGCAGGAGCTGGTGGCTaGATCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGG | + |
|
Preference number: 1 (lower is better) Translates to: VGRCWGRHWHAGAGG*ISLRPAHHALWWAW Trigger: CCATGCCCACCATAGGGCATGATGTGCAGGTCTAAGCGAGATTCAGCCACCAGCTCCTGCATGCCAGTGCCTGCCCCAGCATCTGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 90 bp | AGAGTCTCCAAGCCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTaGTTGTTGGCCAGGCTTAGGTGGGTGAGTGAGCGAAGTCCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: RVSKPRNRNLGRASR*LLARLRWVSERSPL Trigger: GAGGGGACTTCGCTCACTCACCCACCTAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGAGACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR TCA 90 bp | TTAGTCACCGCCCAGGAGAAGGGCCACCTCTCATCACACCAGGTATaGCACTTAGGATGGTTGGGGGTGCACTCGGGGGTAACAGTCACG | + |
|
Preference number: 1 (lower is better) Translates to: LVTAQEKGHLSSHQV*HLGWLGVHSGVTVT Trigger: CGTGACTGTTACCCCCGAGTGCACCCCCAACCATCCTAAGTGTCATACCTGGTGTGATGAGAGGTGGCCCTTCTCCTGGGCGGTGACTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 90 bp | GTGCACTCGGGGGTAACAGTCACGAGTGGAAGCCAGGTGGGTGCGTaGCTGCATCAGAGAGAAGGAACGGGGAGATTCTTGCAAACTGAC | + |
|
Preference number: 1 (lower is better) Translates to: VHSGVTVTSGSQVGA*LHQREGTGRFLQTD Trigger: GTCAGTTTGCAAGAATCTCCCCGTTCCTTCTCTCTGATGCAGGCACGCACCCACCTGGCTTCCACTCGTGACTGTTACCCCCGAGTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 90 bp | GGTCTGTATCACACAGGACTGGCTGTGACAGCCAGAAGGCCAGGCTaGAGAGGTTACCCAGATATCCCAGAATACCCCACAGCCACTTCC | + |
|
Preference number: 1 (lower is better) Translates to: GLYHTGLAVTARRPG*RGYPDIPEYPTATS Trigger: GGAAGTGGCTGTGGGGTATTCTGGGATATCTGGGTAACCTCTCCAGCCTGGCCTTCTGGCTGTCACAGCCAGTCCTGTGTGATACAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 90 bp | TGGTGGGCATGGGATTTGCCCCTTCCCTCCATGGGCAGCCTTCTGTaGCACTTAAGTTCTAGTGGCAAACTAGGGACACTTCTGGGAGTG | + |
|
Preference number: 1 (lower is better) Translates to: WWAWDLPLPSMGSLL*HLSSSGKLGTLLGV Trigger: CACTCCCAGAAGTGTCCCTAGTTTGCCACTAGAACTTAAGTGGCACAGAAGGCTGCCCATGGAGGGAAGGGGCAAATCCCATGCCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 90 bp | CAGCTCCAAGCTGTGTACCAGCCTCAACACCCAAGACGTTGTCTATaGGAGTATCTGTCCTCAGCCAAAATGTGGCTTCAGACTGGAGGG | + |
|
Preference number: 1 (lower is better) Translates to: QLQAVYQPQHPRRCL*EYLSSAKMWLQTGG Trigger: CCCTCCAGTCTGAAGCCACATTTTGGCTGAGGACAGATACTCCCATAGACAACGTCTTGGGTGTTGAGGCTGGTACACAGCTTGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR TCA 90 bp | TGCGTGCCTGCATCAGAGAGAAGGAACGGGGAGATTCTTGCAAACTaGCCCCATTCCCTCTATCAGGCTCAGCTCACAACTGCTGAAGAT | + |
|
Preference number: 1 (lower is better) Translates to: CVPASERRNGEILAN*PHSLYQAQLTTAED Trigger: ATCTTCAGCAGTTGTGAGCTGAGCCTGATAGAGGGAATGGGGTCAGTTTGCAAGAATCTCCCCGTTCCTTCTCTCTGATGCAGGCACGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 90 bp | ATCTCTGTGACGCCTCCAGACTCCTCTTTCCTGCTTCACTTTTACTaGGCACGCGTAAAAGCATTCAGCCTTTGGAAGCAGACATGCGCA | + |
|
Preference number: 1 (lower is better) Translates to: ISVTPPDSSFLLHFY*ARVKAFSLWKQTCA Trigger: TGCGCATGTCTGCTTCCAAAGGCTGAATGCTTTTACGCGTGCGCAGTAAAAGTGAAGCAGGAAAGAGGAGTCTGGAGGCGTCACAGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 90 bp | TTCCTGCTTCACTTTTACTGCGCACGCGTAAAAGCATTCAGCCTTTaGAAGCAGACATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: FLLHFYCARVKAFSL*KQTCAQAAKYRAKK Trigger: TTTCTTGGCCCGGTACTTAGCTGCCTGTGCGCATGTCTGCTTCCAAAGGCTGAATGCTTTTACGCGTGCGCAGTAAAAGTGAAGCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 90 bp | GACCCGTATTCCTCCACGATAGCCAATGGCCAGATTGGGTTTAAGTaGAAAGGAATGCTCTCTCTCGGTACTTTATATGCAACAGGACCA | + |
|
Preference number: 1 (lower is better) Translates to: DPYSSTIANGQIGFK*KGMLSLGTLYATGP Trigger: TGGTCCTGTTGCATATAAAGTACCGAGAGAGAGCATTCCTTTCCACTTAAACCCAATCTGGCCATTGGCTATCGTGGAGGAATACGGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR TCA 90 bp | CCTAGCTCTCTTGAGACTCCTTTGTATCCATCAGGGCCTCCAGAATaGTGCCCATGTGCCACCCTAGAAAATGCTTTAAACCTTTCAAAA | + |
|
Preference number: 1 (lower is better) Translates to: PSSLETPLYPSGPPE*CPCATLENALNLSK Trigger: TTTTGAAAGGTTTAAAGCATTTTCTAGGGTGGCACATGGGCATCATTCTGGAGGCCCTGATGGATACAAAGGAGTCTCAAGAGAGCTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGCAGTCGCACTGGAACGGGTTACCACGGAGGTCCACATGAGTCAGAGTCTGGCCTTGCGGGCGGGTaGGGCTGCCTATGGTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LCSRTGTGYHGGPHESESGLAGG*GCLWWR Trigger: CCTCCACCATAGGCAGCCCCACCCGCCCGCAAGGCC...AGACTCTGACTCATGTGGACCTCCGTGGTAACCCGTTCCAGTGCGACTGCAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAACGGGTTACCACGGAGGTCCACATGAGTCAGAGTCTCCAAGCCTCGGAACAGCCAGGGCCAGGAGATaGTATGGCCTTGCGGGCGGG | + |
|
Preference number: 2 (lower is better) Translates to: GTGYHGGPHESESPSLGTARARR*YGLAGG Trigger: CCCGCCCGCAAGGCCATAGCATCTCCTGGCCCTGGC...TGTTCCGAGGCTTGGAGACTCTGACTCATGTGGACCTCCGTGGTAACCCGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| 3UTR CAA 90 bp | TCCAAGCCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTTGTaGGCCAGGCTTAGGTGGGTGAGTGAGCGAAGTCCCCTCAGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SKPRNRNLGRASRWL*ARLRWVSERSPLRA Trigger: CGCCCTGAGGGGACTTCGCTCACTCACCCACCTAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR CAA 90 bp | GTCTCCAAGCCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTaGTTGGCCAGGCTTAGGTGGGTGAGTGAGCGAAGTCCCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VSKPRNRNLGRASRW*LARLRWVSERSPLR Trigger: CCTGAGGGGACTTCGCTCACTCACCCACCTAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR-3UTR TCA 90 bp | CATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACAACACAGGACTGGCTGTaGCAGCCAGAAGGCCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HAHRQLSTGPRNCPATVTTQDWL*QPEGQA Trigger: AGCCTGGCCTTCTGGCTGTCACAGCCAGTCCTGTGT...TGTCACAGTTGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTGCCTGTGCGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTCAGCTCACAACTGCTGAAGATGGACCAGTTAAAAGAGCACAGGTCCTGGTGTGGAGCTTGGAGTaGGGCTGCGGGCGGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QAQLTTAEDGPVKRAQVLVWSLE*GCGRQG Trigger: TCCCTGCCGCCCGCAGCCTCACTCCAAGCTCCACAC...CAGGACCTGTGCTCTTTTAACTGGTCCATCTTCAGCAGTTGTGAGCTGAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCGCACTGGAACGGGTTACCACGGAGGTCCACATGAGTCAGAGTCTCCAAGCCCAGGCTTAGGTGGGTaGGTGAGCGAAGTCCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SRTGTGYHGGPHESESPSPGLGG*VSEVPS Trigger: TGAGGGGACTTCGCTCACTCACCCACCTAAGCCTGG...GCTTGGAGACTCTGACTCATGTGGACCTCCGTGGTAACCCGTTCCAGTGCGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCCAGCACATAGAAGGTGACAGAGGCAGGAGGATCACACGTTCAATGCCAACCCCGCACAGGCCCCTGTaGCCACACTGGCATTCACCG | + |
|
Preference number: 2 (lower is better) Translates to: LQHIEGDRGRRITRSMPTPHRPL*PHWHSP Trigger: CGGTGAATGCCAGTGTGGGCACAGGGGCCTGTGCGG...GGTTGGCATTGAACGTGTGATCCTCCTGCCTCTGTCACCTTCTATGTGCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR CAA 90 bp | GAGGGTGGGGTGTCCAGACACCTTGGAGCTCAGCAGTTTGCCCTTTaGGTTTCTGTACCCCAGCTCCAAGCTGTGTACCAGCCTCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: EGGVSRHLGAQQFAL*VSVPQLQAVYQPQH Trigger: GTGTTGAGGCTGGTACACAGCTTGGAGCTGGGGTACAGAAACCAAAAGGGCAAACTGCTGAGCTCCAAGGTGTCTGGACACCCCACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 90 bp | TCCTGTGGCTCTACACTTGAACTTCTTAGGGTCAAGGTGATTCAGTaGTATCTGAGCAACGGCAGGGGGACCCGCACAGGCCCCTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SCGSTLELLRVKVIQ*YLSNGRGTRTGPCA Trigger: GGCACAGGGGCCTGTGCGGGTCCCCCTGCCGTTGCTCAGATACAACTGAATCACCTTGACCCTAAGAAGTTCAAGTGTAGAGCCACAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR-3UTR CCA 90 bp | CATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACAGCCAGAAGGCCAGGCTaGAGAGGTTACCCAGATATC | + |
|
Preference number: 2 (lower is better) Translates to: HAHRQLSTGPRNCPATVTARRPG*RGYPDI Trigger: GATATCTGGGTAACCTCTCCAGCCTGGCCTTCTGGC...TGTCACAGTTGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTGCCTGTGCGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 90 bp | GCCAGGCTTAGGTGGGTGAGTGAGCGAAGTCCCCTCAGGGCGTTCTaGGAGATGGAGCCAATCTTGTTGTCCTCAATGAAGAGGTACTGC | + |
|
Preference number: 2 (lower is better) Translates to: ARLRWVSERSPLRAF*EMEPILLSSMKRYC Trigger: GCAGTACCTCTTCATTGAGGACAACAAGATTGGCTCCATCTCCAAGAACGCCCTGAGGGGACTTCGCTCACTCACCCACCTAAGCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGGGATTTGCCCCTTCGGTGTCCAGACACCTTaGAGCTCAGCAGTTTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SRLDLHIMPYGGHGICPFGVQTP*SSAVCP Trigger: AGGGCAAACTGCTGAGCTCCAAGGTGTCTGGACACC...GAAGGGGCAAATCCCATGCCCACCATAGGGCATGATGTGCAGGTCTAAGCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCGAGCCTCATCTCACCCCTCGTGGTAGCAGGCTCTTTGTTCAGTTTTTAATAGAGGTGGGCAGATGCTaGGGCAGGCACTGGCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: PEPHLTPRGSRLFVQFLIEVGRC*GRHWHA Trigger: TGCATGCCAGTGCCTGCCCCAGCATCTGCCCACCTC...TATTAAAAACTGAACAAAGAGCCTGCTACCACGAGGGGTGAGATGAGGCTCGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 90 bp | ATCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGGGATTaGCCCCTTCCCTCCATGGGCAGCCTTCTGTGCCACTTAAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ISLRPAHHALWWAWD*PLPSMGSLLCHLSS Trigger: AGAACTTAAGTGGCACAGAAGGCTGCCCATGGAGGGAAGGGGCAAATCCCATGCCCACCATAGGGCATGATGTGCAGGTCTAAGCGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR TCA 90 bp | GGACCAGTTAAAAGAGCACAGGTCCTGGCTCTGAAGGTGGGCTTGAACTCCGAGACTGCCCAGCAACTGTaGCATCACAGAGACCCGTAT | + |
|
Preference number: 2 (lower is better) Translates to: GPVKRAQVLALKVGLNSETAQQL*HHRDPY Trigger: ATACGGGTCTCTGTGATGTCACAGTTGCTGGGCAGT...CTCGGAGTTCAAGCCCACCTTCAGAGCCAGGACCTGTGCTCTTTTAACTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCGAGCCTCATCTCACCCCTCGTGGTAGCAGGCTCTTTGTTCAGTTTTTAATACGTGAGACCCTCCAGTaGCCCCCTAGCTCTCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PEPHLTPRGSRLFVQFLIRETLQ*PPSSLE Trigger: CTCAAGAGAGCTAGGGGGTCACTGGAGGGTCTCACG...TATTAAAAACTGAACAAAGAGCCTGCTACCACGAGGGGTGAGATGAGGCTCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCCAAGCCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTTGTTGGCCTCTTGTTGTCCTCAATaGAGAGGTACTGCAGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: VSKPRNRNLGRASRWLLASCCPQ*RGTAGR Trigger: CCTACCTGCAGTACCTCTTCATTGAGGACAACAAGA...GGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCACCCCTGCACTGGTCTCCTTGTTTATGTTGAGCGGCCCCCACTTTATCACCAATGTGGCTTCAGACTaGAGGGGCCCTAAACATAGC | + |
|
Preference number: 2 (lower is better) Translates to: PTPALVSLFMLSGPHFITNVASD*RGPKHS Trigger: GCTATGTTTAGGGCCCCTCCAGTCTGAAGCCACATT...GGTGATAAAGTGGGGGCCGCTCAACATAAACAAGGAGACCAGTGCAGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CCA 90 bp | GCATCCACTGTAGCAACCAAAGTACTCTGCAGTCGCACTGGAACGGGTTACCACCTCGGAACAGGAATCTaGGTAGAGCCTCGAGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ASTVATKVLCSRTGTGYHLGTGI*VEPRGG Trigger: ACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAG...GTGGTAACCCGTTCCAGTGCGACTGCAGAGTACTTTGGTTGCTACAGTGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164725.3 ENSMUST00000169785.8 |
||
| 3UTR-3UTR GCA 90 bp | CGGGGAGATTCTTGCAAACTGACCCCATTCCCTCTATCAGGCTCAGCTCACAACACCGGGCCAAGAAACTaGCCAGCAACTGTGACATCA | + |
|
Preference number: 2 (lower is better) Translates to: RGDSCKLTPFPLSGSAHNTGPRN*PATVTS Trigger: TGATGTCACAGTTGCTGGGCAGTTTCTTGGCCCGGT...GTTGTGAGCTGAGCCTGATAGAGGGAATGGGGTCAGTTTGCAAGAATCTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTTGAGCCCACAGAGCCAGACTCCTCTTTCCTaGTTCACTTTTACTGCGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PESSPATQQEAPALSPQSQTPLS*FTFTAH Trigger: GTGCGCAGTAAAAGTGAAGCAGGAAAGAGGAGTCTG...GCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 90 bp | TGTACCCCAGCTCCAAGCTGTGTACCAGCCTCAACACCCAAGACGTaGTCTATGGGAGTATCTGTCCTCAGCCAAAATGTGGCTTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: CTPAPSCVPASTPKT*SMGVSVLSQNVASD Trigger: GTCTGAAGCCACATTTTGGCTGAGGACAGATACTCCCATAGACAACGTCTTGGGTGTTGAGGCTGGTACACAGCTTGGAGCTGGGGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCGAGCCTCATCTCACCCCTCGTGGTAGCAGGCTCTTTGTTCAGTTTTTAATAGCACATCATGCCCTATaGTGGGCATGGGATTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PEPHLTPRGSRLFVQFLIAHHAL*WAWDLP Trigger: GGGCAAATCCCATGCCCACCATAGGGCATGATGTGC...TATTAAAAACTGAACAAAGAGCCTGCTACCACGAGGGGTGAGATGAGGCTCGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR GCA 90 bp | CGGGGAGATTCTTGCAAACTGACCCCATTCCCTCTATCAGGCTCAGCTCACAACTGGAGCTCAGCAGTTTaGCCTTTTGGTTTCTGTACC | + |
|
Preference number: 2 (lower is better) Translates to: RGDSCKLTPFPLSGSAHNWSSAV*PFGFCT Trigger: GGTACAGAAACCAAAAGGGCAAACTGCTGAGCTCCA...GTTGTGAGCTGAGCCTGATAGAGGGAATGGGGTCAGTTTGCAAGAATCTCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCGAGCCTCATCTCACCCCTCGTGGTAGCAGGCTCTTTGTTCAGTTTTTAATAAGCAGTTTGCCCTTTTaGTTTCTGTACCCCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PEPHLTPRGSRLFVQFLISSLPF*FLYPSS Trigger: GGAGCTGGGGTACAGAAACCAAAAGGGCAAACTGCT...TATTAAAAACTGAACAAAGAGCCTGCTACCACGAGGGGTGAGATGAGGCTCGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR GCA 90 bp | CACAATATATTCTATATATTCGTGGAAAGGCAAAAAGAAGGCAAGCTTCAGGGACCCGCACTGAATGGGTaGAAAAGAGGGATTCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: HNIFYIFVERQKEGKLQGPALNG*KRGIPK Trigger: TTTGGGAATCCCTCTTTTGCACCCATTCAGTGCGGG...TCCCTGAAGCTTGCCTTCTTTTTGCCTTTCCACGAATATATAGAATATATTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTATATATTCGTGGAAAGGCAAAAAGAAGGCAAGCTTCAGGGAAGAGGGAATTCCCAAAAGTGGATaGTTACAGCGTCTTGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YSIYSWKGKKKASFREEGIPKSG*LQRLVR Trigger: CCTTACAAGACGCTGTAAGCATCCACTTTTGGGAAT...TCCCTCTTCCCTGAAGCTTGCCTTCTTTTTGCCTTTCCACGAATATATAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| 3UTR CCA 72 bp | GTGGAGCTTGGAGTGAGGCTGCGGGCGGCAGGGAGGTaGGCAGATGCTGGGGCAGGCACTGGCATGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VELGVRLRAAGR*ADAGAGTGMQE Trigger: CTCCTGCATGCCAGTGCCTGCCCCAGCATCTGCCCACCTCCCTGCCGCCCGCAGCCTCACTCCAAGCTCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 72 bp | AAGAGTGTCAGCCAGGGCCAGGAGATGCTATGGCCTTaGGGGCGGGTGGGGCTGCCTATGGTGGAGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KSVSQGQEMLWP*GRVGLPMVEGW Trigger: CCAGCCCTCCACCATAGGCAGCCCCACCCGCCCGCAAGGCCATAGCATCTCCTGGCCCTGGCTGACACTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| 3UTR GCA 72 bp | CAGGGAGAAGAAAGAGTGTCAGCCAGGGCCAGGAGATaGTATGGCCTTGCGGGCGGGTGGGGCTGCCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: QGEERVSARARR*YGLAGGWGCLW Trigger: CCATAGGCAGCCCCACCCGCCCGCAAGGCCATAGCATCTCCTGGCCCTGGCTGACACTCTTTCTTCTCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| 3UTR CCA 72 bp | CATCATGCTCAGGTGCCAGAGACTCTGTGTGGAGCTTaGAGTGAGGCTGCGGGCGGCAGGGAGGTGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HHAQVPETLCGA*SEAAGGREVGR Trigger: TCTGCCCACCTCCCTGCCGCCCGCAGCCTCACTCCAAGCTCCACACAGAGTCTCTGGCACCTGAGCATGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 72 bp | AGAAGAAAGAGTGTCAGCCAGGGCCAGGAGATGCTATaGCCTTGCGGGCGGGTGGGGCTGCCTATGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RRKSVSQGQEML*PCGRVGLPMVE Trigger: CTCCACCATAGGCAGCCCCACCCGCCCGCAAGGCCATAGCATCTCCTGGCCCTGGCTGACACTCTTTCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| 3UTR TCA 72 bp | AGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTTaGGCCCACAGAGCGGGCAGGTTGTGTGCGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SHHLPLNKKLLP*AHRAGRLCAQG Trigger: GCCCTGCGCACACAACCTGCCCGCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR TCA 72 bp | GAGCCTCGAGGTGGTTGTTGGCCAGGCTTAGGTGGGTaGGTGAGCGAAGTCCCCTCAGGGCGTTCTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EPRGGCWPGLGG*VSEVPSGRSWR Trigger: TCTCCAAGAACGCCCTGAGGGGACTTCGCTCACTCACCCACCTAAGCCTGGCCAACAACCACCTCGAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR CCA 72 bp | GGTAGAGCCTCGAGGTGGTTGTTGGCCAGGCTTAGGTaGGTGAGTGAGCGAAGTCCCCTCAGGGCGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GRASRWLLARLR*VSERSPLRAFL Trigger: CAAGAACGCCCTGAGGGGACTTCGCTCACTCACCCACCTAAGCCTGGCCAACAACCACCTCGAGGCTCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR GCA 72 bp | TCCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTaGCTTGAGCCCACAGAGCGGGCAGGTTGTGTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: SRVITCHSTRSS*LEPTERAGCVR Trigger: GCGCACACAACCTGCCCGCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 72 bp | CTCGGGGGTAACAGTCACGAGTGGAAGCCAGGTGGGTaGGTGCCTGCATCAGAGAGAAGGAACGGGGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LGGNSHEWKPGG*VPASERRNGEI Trigger: AATCTCCCCGTTCCTTCTCTCTGATGCAGGCACGCACCCACCTGGCTTCCACTCGTGACTGTTACCCCCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 72 bp | GGGGTAACAGTCACGAGTGGAAGCCAGGTGGGTGCGTaGCTGCATCAGAGAGAAGGAACGGGGAGATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GVTVTSGSQVGA*LHQREGTGRFL Trigger: CAAGAATCTCCCCGTTCCTTCTCTCTGATGCAGGCACGCACCCACCTGGCTTCCACTCGTGACTGTTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 72 bp | TCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATaGGATTTGCCCCTTCCCTCCATGGGCAGCCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLRPAHHALWWA*DLPLPSMGSLL Trigger: CAGAAGGCTGCCCATGGAGGGAAGGGGCAAATCCCATGCCCACCATAGGGCATGATGTGCAGGTCTAAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 72 bp | AAGCCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTaGTTGTTGGCCAGGCTTAGGTGGGTGAGTGAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: KPRNRNLGRASR*LLARLRWVSER Trigger: TCGCTCACTCACCCACCTAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR CCA 72 bp | CACACAGGACTGGCTGTGACAGCCAGAAGGCCAGGCTaGAGAGGTTACCCAGATATCCCAGAATACCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: HTGLAVTARRPG*RGYPDIPEYPT Trigger: TGTGGGGTATTCTGGGATATCTGGGTAACCTCTCCAGCCTGGCCTTCTGGCTGTCACAGCCAGTCCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 72 bp | CATGAGTCAGAGTCTCCAAGCCTCGGAACAGGAATCTaGGTAGAGCCTCGAGGTGGTTGTTGGCCAGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HESESPSLGTGI*VEPRGGCWPGF Trigger: GAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGAGACTCTGACTCATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| 3UTR CCA 72 bp | CATGAGTCAGAGTCTCCAAGCCTCGGAACAGGAATCTaGGTAGAGCCTCGAGGTGGTTGTTGGCCAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HESESPSLGTGI*VEPRGGCWPGL Trigger: TAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGAGACTCTGACTCATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTCAGCTCACAACTGCTGAAGATGGACCAGTTAAAAGAGCACAGGTCCTGGCTCTGAAGGTGGGCTaGAACTCCGAGCTGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QAQLTTAEDGPVKRAQVLALKVG*NSELAV Trigger: AACAGCCAGCTCGGAGTTCAAGCCCACCTTCAGAGC...CAGGACCTGTGCTCTTTTAACTGGTCCATCTTCAGCAGTTGTGAGCTGAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 72 bp | GCACGCGTAAAAGCATTCAGCCTTTGGAAGCAGACATaGGCACAGGCAGCTAAGTACCGGGCCAAGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: ARVKAFSLWKQT*AQAAKYRAKKL Trigger: CAGTTTCTTGGCCCGGTACTTAGCTGCCTGTGCGCATGTCTGCTTCCAAAGGCTGAATGCTTTTACGCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 72 bp | CGTGCCTGCATCAGAGAGAAGGAACGGGGAGATTCTTaGAAACTGACCCCATTCCCTCTATCAGGCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RACIREKERGDS*KLTPFPLSGSA Trigger: AGCTGAGCCTGATAGAGGGAATGGGGTCAGTTTGCAAGAATCTCCCCGTTCCTTCTCTCTGATGCAGGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 72 bp | TGTCCAGACACCTTGGAGCTCAGCAGTTTGCCCTTTTaGTTTCTGTACCCCAGCTCCAAGCTGTGTACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CPDTLELSSLPF*FLYPSSKLCTS Trigger: GCTGGTACACAGCTTGGAGCTGGGGTACAGAAACCAAAAGGGCAAACTGCTGAGCTCCAAGGTGTCTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCGTACATTCTGTTCTTGCCCCCGTCACATTCTGGAAAGGGGTACCCAGTGATCCCAGGCTGATGCACTaGGCTAGTGGTCTGTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: LVHSVLAPVTFWKGVPSDPRLMH*ASGLYH Trigger: GTGATACAGACCACTAGCCAAGTGCATCAGCCTGGG...ATCACTGGGTACCCCTTTCCAGAATGTGACGGGGGCAAGAACAGAATGTACGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCCCTGCACTGGTCTCCTTGTTTATGTTGAGCGGCCCCCACTTTATCACCTTGGAGCTCAGCAGTTaGCCCTTTTGGTTTCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PTPALVSLFMLSGPHFITLELSS*PFWFLY Trigger: GTACAGAAACCAAAAGGGCAAACTGCTGAGCTCCAA...GGTGATAAAGTGGGGGCCGCTCAACATAAACAAGGAGACCAGTGCAGGGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CAA 90 bp | GGACCAGTTAAAAGAGCACAGGTCCTGGCTCTGAAGGTGGGCTTGAACTCCGAGGACCCCCTAGCTCTCTaGAGACTCCTTTGTATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GPVKRAQVLALKVGLNSEDPLAL*RLLCIH Trigger: ATGGATACAAAGGAGTCTCAAGAGAGCTAGGGGGTC...CTCGGAGTTCAAGCCCACCTTCAGAGCCAGGACCTGTGCTCTTTTAACTGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR TCA 72 bp | TGTCCCTGTAAGACCTGTAATTTCCCAGGACACCACTaGTACTCTACAGTGGCCACACAGCGTGAGACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CPCKTCNFPGHH*YSTVATQRETL Trigger: GAGGGTCTCACGCTGTGTGGCCACTGTAGAGTATCAGTGGTGTCCTGGGAAATTACAGGTCTTACAGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 72 bp | TGGGATTTGCCCCTTCCCTCCATGGGCAGCCTTCTGTaGCACTTAAGTTCTAGTGGCAAACTAGGGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: WDLPLPSMGSLL*HLSSSGKLGTL Trigger: AAGTGTCCCTAGTTTGCCACTAGAACTTAAGTGGCACAGAAGGCTGCCCATGGAGGGAAGGGGCAAATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 72 bp | CGTTGTCTATGGGAGTATCTGTCCTCAGCCAAAATGTaGCTTCAGACTGGAGGGGCCCTAAACATAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RCLWEYLSSAKM*LQTGGALNIAG Trigger: CCCAGCTATGTTTAGGGCCCCTCCAGTCTGAAGCCACATTTTGGCTGAGGACAGATACTCCCATAGACAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CCA 72 bp | CACTTTTACTGCGCACGCGTAAAAGCATTCAGCCTTTaGAAGCAGACATGCGCACAGGCAGCTAAGTACCGG | + |
|
Preference number: 3 (lower is better) Translates to: HFYCARVKAFSL*KQTCAQAAKYR Trigger: CCGGTACTTAGCTGCCTGTGCGCATGTCTGCTTCCAAAGGCTGAATGCTTTTACGCGTGCGCAGTAAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGGGATTTGCCCCTTCAAAAGCATTCAGCCTTaGGAAGCAGACATGCGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SRLDLHIMPYGGHGICPFKSIQP*EADMRT Trigger: TGTGCGCATGTCTGCTTCCAAAGGCTGAATGCTTTT...GAAGGGGCAAATCCCATGCCCACCATAGGGCATGATGTGCAGGTCTAAGCGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCTCCAAGCCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTTGTTGGAGATGGAGCCAATCTaGTTGTCCTCAATGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RVSKPRNRNLGRASRWLLEMEPI*LSSMKR Trigger: CCTCTTCATTGAGGACAACAAGATTGGCTCCATCTC...CAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGAGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR TCA 72 bp | GCATCAGAGAGAAGGAACGGGGAGATTCTTGCAAACTaGCCCCATTCCCTCTATCAGGCTCAGCTCACAACT | + |
|
Preference number: 3 (lower is better) Translates to: ASERRNGEILAN*PHSLYQAQLTT Trigger: AGTTGTGAGCTGAGCCTGATAGAGGGAATGGGGTCAGTTTGCAAGAATCTCCCCGTTCCTTCTCTCTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR TCA 72 bp | CAGGACCGGCTTCAAAAGCTGTGCAAAGACCAAGTGTaGTCGTTCATGCTTGCAACTCCAGCACATAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QDRLQKLCKDQV*SFMLATPAHRR Trigger: CCTTCTATGTGCTGGAGTTGCAAGCATGAACGATCACACTTGGTCTTTGCACAGCTTTTGAAGCCGGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATCACACGTTCAATGCCAACCTTGTCTGTGAATTGAGATCCTGTGGCTCTATGGAGCCAATCTTGTaGTCCTCAATGAAGAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: EDHTFNANLVCELRSCGSMEPIL*SSMKRY Trigger: GTACCTCTTCATTGAGGACAACAAGATTGGCTCCAT...AGAGCCACAGGATCTCAATTCACAGACAAGGTTGGCATTGAACGTGTGATCCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| 3UTR TCA 72 bp | CTTGAGACTCCTTTGTATCCATCAGGGCCTCCAGAATaGTGCCCATGTGCCACCCTAGAAAATGCTTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LETPLYPSGPPE*CPCATLENALN Trigger: GTTTAAAGCATTTTCTAGGGTGGCACATGGGCATCATTCTGGAGGCCCTGATGGATACAAAGGAGTCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR GCA 72 bp | CTGAATGGGTGCAAAAGAGGGATTCCCAAAAGTGGATaGTTACAGCGTCTTGTAAGGTTGTGTGATGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LNGCKRGIPKSG*LQRLVRLCDGA Trigger: TGCACCATCACACAACCTTACAAGACGCTGTAAGCATCCACTTTTGGGAATCCCTCTTTTGCACCCATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| 3UTR CAA 72 bp | AAAGAGTGTCAGCCAGGGCCAGGAGATGCTATGGCCTaGCGGGCGGGTGGGGCTGCCTATGGTGGAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KECQPGPGDAMA*RAGGAAYGGGL Trigger: CAGCCCTCCACCATAGGCAGCCCCACCCGCCCGCAAGGCCATAGCATCTCCTGGCCCTGGCTGACACTCTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCCCGAGCCTCATCTCACCCCTCGTGGTAGCAGGCTCTTTGTTCAGTTTCCGCGACCACAGCTGTaGGCCTCCCCACAGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFPEPHLTPRGSRLFVQFPRPQL*ASPQAG Trigger: GCCCGCCTGTGGGGAGGCTCACAGCTGTGGTCGCGG...AAACTGAACAAAGAGCCTGCTACCACGAGGGGTGAGATGAGGCTCGGGGAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTGTCAGCCAGGGCCAGGAGATGCTATGGCCTTGCGGGCGGGTGGGGCTATACACACAGGTGGGTaGGTGAGCGAAGTCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KECQPGPGDAMALRAGGAIHTGG*VSEVPS Trigger: TGAGGGGACTTCGCTCACTCACCCACCTGTGTGTAT...AGCCCCACCCGCCCGCAAGGCCATAGCATCTCCTGGCCCTGGCTGACACTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTTGAGCCCACAGAGCGCATCGGTATCGCGGTaGCAGGCGTGCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PESSPATQQEAPALSPQSASVSR*QACRLW Trigger: CCAGAGCCTGCACGCCTGGCACCGCGATACCGATGC...GCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | TCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGGGATTTGCCCCTTCGACGCAGGTCGGGGCTaGACCGCGACCACAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLDLHIMPYGGHGICPFDAGRG*TATTAV Trigger: CACAGCTGTGGTCGCGGTCCAGCCCCGACCTGCGTC...GAAGGGGCAAATCCCATGCCCACCATAGGGCATGATGTGCAGGTCTAAGCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTTGAGCCCACAGAGCGTGCAGGCTCTGGCGTaGGTAGAAGCCCGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PESSPATQQEAPALSPQSVQALA*VEARPI Trigger: GATGGGCCGGGCTTCTACCCACGCCAGAGCCTGCAC...GCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | GAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTaGAGCCCACAGAGCGGGCAGGTTGTGTGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESSPATQQEAPA*SPQSGQVVCAG Trigger: CCCTGCGCACACAACCTGCCCGCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | CATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACACACGACACAGCAGCGTaGTGCTGCCAGCCTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HAHRQLSTGPRNCPATVTHDTAA*CCQPWR Trigger: CCTCCAAGGCTGGCAGCACCACGCTGCTGTGTCGTG...TGTCACAGTTGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTGCCTGTGCGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCCCGAGCCTCATCTCACCCCTCGTGGTAGCAGGCTCTTTGTTCAGTTTCCTGCTACGGTGACTTaGGCAAAGGCTCGAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFPEPHLTPRGSRLFVQFPATVT*AKARGA Trigger: GGCCCCTCGAGCCTTTGCCCAAGTCACCGTAGCAGG...AAACTGAACAAAGAGCCTGCTACCACGAGGGGTGAGATGAGGCTCGGGGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | CGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTTGTaGGCCAGGCTTAGGTGGGTGAGTGAGCGAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNRNLGRASRWL*ARLRWVSERSP Trigger: GGGACTTCGCTCACTCACCCACCTAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCTGCACTGGTCTCCTTGTTTATGTTGAGCGGCCCCCACTTTATCACCCCAGGCTTAGGTGGGTaGGTGAGCGAAGTCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPALVSLFMLSGPHFITPGLGG*VSEVPS Trigger: TGAGGGGACTTCGCTCACTCACCCACCTAAGCCTGG...GGTGATAAAGTGGGGGCCGCTCAACATAAACAAGGAGACCAGTGCAGGGGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR TCA 90 bp | CTCGTACATTCTGTTCTTGCCCCCGTCACATTCTGGAAAGGGGTACCCAGTGATGGCGGGCAGCCAGTATaGAGAGGCGTGGGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVHSVLAPVTFWKGVPSDGGQPV*RGVGPA Trigger: TGCTGGGCCCACGCCTCTTCATACTGGCTGCCCGCC...ATCACTGGGTACCCCTTTCCAGAATGTGACGGGGGCAAGAACAGAATGTACGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR GCA 90 bp | CTATCCAGGATCCCATCCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCACCACGAAGCAGGGCTaGCCATCCAGCCAGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRIPSRVITCHSTRSSCTTKQG*PSSQRS Trigger: GCTCCTCTGGCTGGATGGGCAGCCCTGCTTCGTGGT...GCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGGATGGGATCCTGGATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCTCAGCTCACAACTGCTGAAGATGGACCAGTTAAAAGAGCACAGGTCCTGCCTCTGGGATGTCCGTaGGCCTCTCGAAGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAQLTTAEDGPVKRAQVLPLGCP*ASRSGH Trigger: GTGGCCGCTTCGAGAGGCGCACGGACATCCCAGAGG...CAGGACCTGTGCTCTTTTAACTGGTCCATCTTCAGCAGTTGTGAGCTGAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCCCGAGCCTCATCTCACCCCTCGTGGTAGCAGGCTCTTTGTTCAGTTTGGAGCAGGAGCAGTGTaGAGGGCACTTTCCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFPEPHLTPRGSRLFVQFGAGAV*RALSFG Trigger: CCCAAAGGAAAGTGCCCTCCACACTGCTCCTGCTCC...AAACTGAACAAAGAGCCTGCTACCACGAGGGGTGAGATGAGGCTCGGGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR GCA 90 bp | CTCGTACATTCTGTTCTTGCCCCCGTCACATTCTGGAAAGGGGTACCCAGTGATACTCCAGGCCACTCCTaGCCCAGCCCAAGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVHSVLAPVTFWKGVPSDTPGHS*PSPSQQ Trigger: CTGTTGGCTTGGGCTGGGGCAGGAGTGGCCTGGAGT...ATCACTGGGTACCCCTTTCCAGAATGTGACGGGGGCAAGAACAGAATGTACGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTTGAGCCCACAGAGCCTCGGAACAGGAATCTaGGTAGAGCCTCGAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PESSPATQQEAPALSPQSLGTGI*VEPRGG Trigger: ACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAG...GCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | CTATCCAGGATCCCATCCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCGGAGCTCGGCATCATTaGGTCGCAGCAGCCGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRIPSRVITCHSTRSSCGARHH*VAAAVE Trigger: CTCAACGGCTGCTGCGACCCAATGATGCCGAGCTCC...GCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGGATGGGATCCTGGATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | CCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTaGTTGGCCAGGCTTCTGATGGAGCAGGGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRNRNLGRASRW*LARLLMEQGEE Trigger: TTCTTCTCCCTGCTCCATCAGAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS-3UTR TCA 90 bp | CTCGTACATTCTGTTCTTGCCCCCGTCACATTCTGGAAAGGGGTACCCAGTGATGGGAGACCCCCATCCTaGCGAGAGAGAGTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVHSVLAPVTFWKGVPSDGRPPS*RERVTG Trigger: TCCTGTCACTCTCTCTCGTCAGGATGGGGGTCTCCC...ATCACTGGGTACCCCTTTCCAGAATGTGACGGGGGCAAGAACAGAATGTACGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCTCAGCTCACAACTGCTGAAGATGGACCAGTTAAAAGAGCACAGGTCCTGAGCGGAAGACTTGGCTaGAGGCGAAGTCGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAQLTTAEDGPVKRAQVLSGRLG*RRSRCP Trigger: TGGGCAGCGACTTCGCCTTCAGCCAAGTCTTCCGCT...CAGGACCTGTGCTCTTTTAACTGGTCCATCTTCAGCAGTTGTGAGCTGAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTTTGCCCTTTTGGTTTCTGTACCCCAGCTCCAAGCTGTGTACCAGCCTTCTGCGTGGGGCCCTTaGAGCACGCTGCGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQFALLVSVPQLQAVYQPSAWGP*STLRIE Trigger: TTCTATTCGCAGCGTGCTTCAAGGGCCCCACGCAGA...AGGCTGGTACACAGCTTGGAGCTGGGGTACAGAAACCAAAAGGGCAAACTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | CATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACACCCTCAGGGCGTTCTTaGAGATGGAGCCAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HAHRQLSTGPRNCPATVTPSGRS*RWSQSC Trigger: ACAAGATTGGCTCCATCTCCAAGAACGCCCTGAGGG...TGTCACAGTTGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTGCCTGTGCGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCAGCTCACAACTGCTGAAGATGGACCAGTTAAAAGAGCACAGGTCCTGTGGTGCTGCCAGCCTTaGAGGCATCAGCCACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: QAQLTTAEDGPVKRAQVLWCCQP*RHQPPR Trigger: TCGTGGTGGCTGATGCCTCCAAGGCTGGCAGCACCA...CAGGACCTGTGCTCTTTTAACTGGTCCATCTTCAGCAGTTGTGAGCTGAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCCTTTTGGTTTCTGTACCCCAGCTCCAAGCTGTGTACCAGCCTCAACACCAAGAGCACAGGCCTCTaGGAGGCTGAAGCAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPFWFLYPSSKLCTSLNTKSTGL*EAEASS Trigger: GCTGCTTGCTTCAGCCTCCCAGAGGCCTGTGCTCTT...GGTGTTGAGGCTGGTACACAGCTTGGAGCTGGGGTACAGAAACCAAAAGGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTTGAGCCCACAGAGCGCAATTAGTAGTGGCTaGAAGACATGGGACCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PESSPATQQEAPALSPQSAISSG*KTWDPR Trigger: CCGAGGGTCCCATGTCTTCCAGCCACTACTAATTGC...GCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | GACCAAGGGACGTTGAGGGTGGGGTGTCCAGACACCTaGGAGCTCAGCAGTTTGCCCTTTTGGTTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DQGTLRVGCPDT*ELSSLPFWFLY Trigger: GTACAGAAACCAAAAGGGCAAACTGCTGAGCTCCAAGGTGTCTGGACACCCCACCCTCAACGTCCCTTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | CACAGCGTGAGACCCTCCAGTGACCCCCTAGCTCTCTaGAGACTCCTTTGTATCCATCAGGGCCTCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSVRPSSDPLAL*RLLCIHQGLQN Trigger: ATTCTGGAGGCCCTGATGGATACAAAGGAGTCTCAAGAGAGCTAGGGGGTCACTGGAGGGTCTCACGCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | GCGTGCCTGCATCAGAGAGAAGGAACGGGGAGATTCTaGCAAACTGACCCCATTCCCTCTATCAGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLHQREGTGRF*QTDPIPSIRLS Trigger: GCTGAGCCTGATAGAGGGAATGGGGTCAGTTTGCAAGAATCTCCCCGTTCCTTCTCTCTGATGCAGGCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | CGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTTGTaGGCCAGGCTTCTGATGGAGCAGGGAGAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNRNLGRASRWL*ARLLMEQGEER Trigger: TCTTTCTTCTCCCTGCTCCATCAGAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAAGCCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTTGTTGGCCAGAAGGTATTGGATGTaGAGAGGAGCAGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: VSKPRNRNLGRASRWLLARRYWM*RGAGAM Trigger: CATTGCACCTGCTCCTCTTCACATCCAATACCTTCT...GGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164725.3 ENSMUST00000169785.8 |
||
| CDS-3UTR GCA 90 bp | ATAGCCAATGGCCAGATTGGGTTTAAGTGGAAAGGAATGCTCTCTCTCGGTACTCCGCACAGGCCCCTGTaGCCACACTGGCATTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: IANGQIGFKWKGMLSLGTPHRPL*PHWHSP Trigger: CGGTGAATGCCAGTGTGGGCACAGGGGCCTGTGCGG...AGTACCGAGAGAGAGCATTCCTTTCCACTTAAACCCAATCTGGCCATTGGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR GCA 90 bp | AATGGGTGCAAAAGAGGGATTCCCAAAAGTGGATGCTTACAGCGTCTTGTAAGGCCGCACAGGCCCCTGTaGCCACACTGGCATTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: NGCKRGIPKSGCLQRLVRPHRPL*PHWHSP Trigger: CGGTGAATGCCAGTGTGGGCACAGGGGCCTGTGCGG...CCTTACAAGACGCTGTAAGCATCCACTTTTGGGAATCCCTCTTTTGCACCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCAGCTCACAACTGCTGAAGATGGACCAGTTAAAAGAGCACAGGTCCTGCAGTATGAAGAGGCGTaGGCCCAGCACCAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAQLTTAEDGPVKRAQVLQYEEA*AQHQRL Trigger: AAGCCTCTGGTGCTGGGCCCACGCCTCTTCATACTG...CAGGACCTGTGCTCTTTTAACTGGTCCATCTTCAGCAGTTGTGAGCTGAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | GTGTCCAGACACCTTGGAGCTCAGCAGTTTGCCCTTTaGGTTTCTGTACCCCAGCTCCAAGCTGTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSRHLGAQQFAL*VSVPQLQAVYQ Trigger: CTGGTACACAGCTTGGAGCTGGGGTACAGAAACCAAAAGGGCAAACTGCTGAGCTCCAAGGTGTCTGGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | AGGTGGGTGAGTGAGCGAAGTCCCCTCAGGGCGTTCTaGGAGATGGAGCCAATCTTGTTGTCCTCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RWVSERSPLRAF*EMEPILLSSMK Trigger: CTTCATTGAGGACAACAAGATTGGCTCCATCTCCAAGAACGCCCTGAGGGGACTTCGCTCACTCACCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| CDS-3UTR TCA 90 bp | ACGGGTTACCACGGAGGTCCACATGAGTCAGAGTCTCCAAGCCTCGGAACAGGAAGAAGGTATTGGATGTaGAGAGGAGCAGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TGYHGGPHESESPSLGTGRRYWM*RGAGAM Trigger: CATTGCACCTGCTCCTCTTCACATCCAATACCTTCT...TCCTGTTCCGAGGCTTGGAGACTCTGACTCATGTGGACCTCCGTGGTAACCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164725.3 ENSMUST00000169785.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCCCGAGCCTCATCTCACCCCTCGTGGTAGCAGGCTCTTTGTTCAGTTTTCTTGTTGTCCTCAATaGAGAGGTACTGCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFPEPHLTPRGSRLFVQFSCCPQ*RGTAGR Trigger: CCTACCTGCAGTACCTCTTCATTGAGGACAACAAGA...AAACTGAACAAAGAGCCTGCTACCACGAGGGGTGAGATGAGGCTCGGGGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR GCA 90 bp | ATAGCCAATGGCCAGATTGGGTTTAAGTGGAAAGGAATGCTCTCTCTCGGTACTCCAGCACCAGAGGCTTaGAGGACACCACTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IANGQIGFKWKGMLSLGTPAPEA*RTPLRA Trigger: CGCCCTCAGTGGTGTCCTGCAAGCCTCTGGTGCTGG...AGTACCGAGAGAGAGCATTCCTTTCCACTTAAACCCAATCTGGCCATTGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | ATCCACTGTAGCAACCAAAGTACTCTGCAGTCGCACTGGAACGGGTTACCACGGCCCTCAGGGCGTTCTTaGAGATGGAGCCAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IHCSNQSTLQSHWNGLPRPSGRS*RWSQSC Trigger: ACAAGATTGGCTCCATCTCCAAGAACGCCCTGAGGG...CCGTGGTAACCCGTTCCAGTGCGACTGCAGAGTACTTTGGTTGCTACAGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS-3UTR CCA 90 bp | CATGCGCACAGGCAGCTAAGTACCGGGCCAAGAAACTGCCCAGCAACTGTGACACCTGAAAGTGTTTTGTaGCATAGACGTCCTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HAHRQLSTGPRNCPATVTPESVL*HRRPLP Trigger: AGGCAGAGGACGTCTATGCCACAAAACACTTTCAGG...TGTCACAGTTGCTGGGCAGTTTCTTGGCCCGGTACTTAGCTGCCTGTGCGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCCTTTTGGTTTCTGTACCCCAGCTCCAAGCTGTGTACCAGCCTCAACACCTCAAAGCGGAAGACTTaGCTGAAGGCGAAGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFWFLYPSSKLCTSLNTSKRKT*LKAKSL Trigger: CAGCGACTTCGCCTTCAGCCAAGTCTTCCGCTTTGA...GGTGTTGAGGCTGGTACACAGCTTGGAGCTGGGGTACAGAAACCAAAAGGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | TCTACACTTGAACTTCTTAGGGTCAAGGTGATTCAGTaGTATCTGAGCAACGGCAGGGGGACCCGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLELLRVKVIQ*YLSNGRGTRTG Trigger: GCCTGTGCGGGTCCCCCTGCCGTTGCTCAGATACAACTGAATCACCTTGACCCTAAGAAGTTCAAGTGTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| CDS-3UTR TCA 90 bp | TCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGGGATTTGCCCCTTCAGAAGGTATTGGATGTaGAGAGGAGCAGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SRLDLHIMPYGGHGICPFRRYWM*RGAGAM Trigger: CATTGCACCTGCTCCTCTTCACATCCAATACCTTCT...GAAGGGGCAAATCCCATGCCCACCATAGGGCATGATGTGCAGGTCTAAGCGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CCA 90 bp | CTGAATGGGTGCAAAAGAGGGATTCCCAAAAGTGGATGCTTACAGCGTCTTGTACACCCCACCCATGCATaGGAGCCTGAGACCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNGCKRGIPKSGCLQRLVHPTHA*EPETRG Trigger: TCCTCTGGTCTCAGGCTCCCATGCATGGGTGGGGTG...TACAAGACGCTGTAAGCATCCACTTTTGGGAATCCCTCTTTTGCACCCATTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| CDS-3UTR CCA 90 bp | CTCGTACATTCTGTTCTTGCCCCCGTCACATTCTGGAAAGGGGTACCCAGTGATCCCAGGATAGCCAACTaGTCTCTGGCAATTAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVHSVLAPVTFWKGVPSDPRIAN*SLAISS Trigger: ACTACTAATTGCCAGAGACCAGTTGGCTATCCTGGG...ATCACTGGGTACCCCTTTCCAGAATGTGACGGGGGCAAGAACAGAATGTACGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTTAAACCTTTCAAAACAAAATTCCTATCCAGGATCCCATCCAGAGTCATCCTTGCAGGACACCACTaGGGGCGCAGACAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFKPFKTKFLSRIPSRVILAGHH*GRRQLL Trigger: GAGGAGCTGTCTGCGCCCTCAGTGGTGTCCTGCAAG...GATGACTCTGGATGGGATCCTGGATAGGAATTTTGTTTTGAAAGGTTTAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTTAAACCTTTCAAAACAAAATTCCTATCCAGGATCCCATCCAGAGTCATCACAGCAGCGTGGTGCTaGCAGCCTTGGAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFKPFKTKFLSRIPSRVITAAWC*QPWRHQ Trigger: CTGATGCCTCCAAGGCTGGCAGCACCACGCTGCTGT...GATGACTCTGGATGGGATCCTGGATAGGAATTTTGTTTTGAAAGGTTTAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| 3UTR CAA 72 bp | GAGGATCACACGTTCAATGCCAACCTTGTCTGTGAATaGAGATCCTGTGGCTCTACACTTGAACTTCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDHTFNANLVCE*RSCGSTLELLR Trigger: CCTAAGAAGTTCAAGTGTAGAGCCACAGGATCTCAATTCACAGACAAGGTTGGCATTGAACGTGTGATCCTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| CDS CCA 90 bp | GGCCTCCGCATCGGTATCGCGGTGCCAGGCGTGCAGGCTCTGGCGTaGGTAGAAGCCCGGCCCATCACGACACAGCAGCGTGGTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLRIGIAVPGVQALA*VEARPITTQQRGAA Trigger: GGCAGCACCACGCTGCTGTGTCGTGATGGGCCGGGCTTCTACCCACGCCAGAGCCTGCACGCCTGGCACCGCGATACCGATGCGGAGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 90 bp | ACCGCGACCACAGCTGTGAGCCTCCCCACAGGCGGGCAGCCAGTATaGAGAGGCGTGGGCCCAGCACCAGAGGCTTGCAGGACACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: TATTAVSLPTGGQPV*RGVGPAPEACRTPL Trigger: CAGTGGTGTCCTGCAAGCCTCTGGTGCTGGGCCCACGCCTCTTCATACTGGCTGCCCGCCTGTGGGGAGGCTCACAGCTGTGGTCGCGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS GCA 90 bp | GGCGTGGGTAGAAGCCCGGCCCATCACGACACAGCAGCGTGGTGCTaGCAGCCTTGGAGGCATCAGCCACCACGAAGCAGGGCTGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GVGRSPAHHDTAAWC*QPWRHQPPRSRAAH Trigger: ATGGGCAGCCCTGCTTCGTGGTGGCTGATGCCTCCAAGGCTGGCAGCACCACGCTGCTGTGTCGTGATGGGCCGGGCTTCTACCCACGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS GCA 90 bp | TCTGGCGTGGGTAGAAGCCCGGCCCATCACGACACAGCAGCGTGGTaGTGCCAGCCTTGGAGGCATCAGCCACCACGAAGCAGGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGVGRSPAHHDTAAW*CQPWRHQPPRSRAA Trigger: GGCAGCCCTGCTTCGTGGTGGCTGATGCCTCCAAGGCTGGCAGCACCACGCTGCTGTGTCGTGATGGGCCGGGCTTCTACCCACGCCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 90 bp | CCACGAAGCAGGGCTGCCCATCCAGCCAGAGGAGCTCGGCATCATTaGGTCGCAGCAGCCGTTGAGGGGCTAGGACCTGCACGGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSRAAHPARGARHH*VAAAVEGLGPARGS Trigger: TGACCCCCGTGCAGGTCCTAGCCCCTCAACGGCTGCTGCGACCCAATGATGCCGAGCTCCTCTGGCTGGATGGGCAGCCCTGCTTCGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 90 bp | GGCTCTGGCGTGGGTAGAAGCCCGGCCCATCACGACACAGCAGCGTaGTGCTGCCAGCCTTGGAGGCATCAGCCACCACGAAGCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGVGRSPAHHDTAA*CCQPWRHQPPRSRA Trigger: AGCCCTGCTTCGTGGTGGCTGATGCCTCCAAGGCTGGCAGCACCACGCTGCTGTGTCGTGATGGGCCGGGCTTCTACCCACGCCAGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS GCA 90 bp | GTGGTGCTGCCAGCCTTGGAGGCATCAGCCACCACGAAGCAGGGCTaGCCATCCAGCCAGAGGAGCTCGGCATCATTGGGTCGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVLPALEASATTKQG*PSSQRSSASLGRSS Trigger: GCTGCTGCGACCCAATGATGCCGAGCTCCTCTGGCTGGATGGGCAGCCCTGCTTCGTGGTGGCTGATGCCTCCAAGGCTGGCAGCACCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 90 bp | TATGAAGAGGCGTGGGCCCAGCACCAGAGGCTTGCAGGACACCACTaGGGGCGCAGACAGCTCCTCCTCAGGCCTGAAGCGTTGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YEEAWAQHQRLAGHH*GRRQLLLRPEALQA Trigger: AGCCTGCAACGCTTCAGGCCTGAGGAGGAGCTGTCTGCGCCCTCAGTGGTGTCCTGCAAGCCTCTGGTGCTGGGCCCACGCCTCTTCATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 90 bp | GCCTCTGGGATGTCCGTGCGCCTCTCGAAGCGGCCACCAACCCAGTaGAAGAGCACAGGCCTCTGGGAGGCTGAAGCAAGCAGCAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: ASGMSVRLSKRPPTQ*KSTGLWEAEASSRC Trigger: GCATCTGCTGCTTGCTTCAGCCTCCCAGAGGCCTGTGCTCTTTCACTGGGTTGGTGGCCGCTTCGAGAGGCGCACGGACATCCCAGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 90 bp | GCATCTTTAAGAAGCTGCCAGCCTTCAGCCGGGAGACCCCCATCCTaGCGAGAGAGAGTGACAGGAGCGTGGTGGAGAAGCTCTCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLRSCQPSAGRPPS*RERVTGAWWRSSQA Trigger: TGCCTGAGAGCTTCTCCACCACGCTCCTGTCACTCTCTCTCGTCAGGATGGGGGTCTCCCGGCTGAAGGCTGGCAGCTTCTTAAAGATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS GCA 90 bp | CACATCTCCTCCAGCCTGAAAGTGTTTTGTGGCATAGACGTCCTCTaGCTCTGGGATGTCCGTGCGCCTCTCGAAGCGGCCACCAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: HISSSLKVFCGIDVL*LWDVRAPLEAATNP Trigger: TGGGTTGGTGGCCGCTTCGAGAGGCGCACGGACATCCCAGAGGCAGAGGACGTCTATGCCACAAAACACTTTCAGGCTGGAGGAGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 90 bp | TCCTCCAGCCTGAAAGTGTTTTGTGGCATAGACGTCCTCTGCCTCTaGGATGTCCGTGCGCCTCTCGAAGCGGCCACCAACCCAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSSLKVFCGIDVLCL*DVRAPLEAATNPVK Trigger: TTTCACTGGGTTGGTGGCCGCTTCGAGAGGCGCACGGACATCCCAGAGGCAGAGGACGTCTATGCCACAAAACACTTTCAGGCTGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 90 bp | GCGTCAGGCACAGGAACACATCTCCTCCAGCCTGAAAGTGTTTTGTaGCATAGACGTCCTCTGCCTCTGGGATGTCCGTGCGCCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASGTGTHLLQPESVL*HRRPLPLGCPCASR Trigger: TCGAGAGGCGCACGGACATCCCAGAGGCAGAGGACGTCTATGCCACAAAACACTTTCAGGCTGGAGGAGATGTGTTCCTGTGCCTGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 90 bp | CGGAAGACTTGGCTGAAGGCGAAGTCGCTGCCCAGGATAGCCAACTaGTCTCTGGCAATTAGTAGTGGCTGGAAGACATGGGACCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RKTWLKAKSLPRIAN*SLAISSGWKTWDPR Trigger: CCGAGGGTCCCATGTCTTCCAGCCACTACTAATTGCCAGAGACCAGTTGGCTATCCTGGGCAGCGACTTCGCCTTCAGCCAAGTCTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CAA 90 bp | TCTCGCTTAGACCTGCACATCATGCCCTATGGTGGGCATGGGATTTGCCCCTTCCTCAGGCCTGAAGCGTaGCAGGCTGTAGTCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SRLDLHIMPYGGHGICPFLRPEA*QAVVPH Trigger: GTGTGGGACTACAGCCTGCAACGCTTCAGGCCTGAG...GAAGGGGCAAATCCCATGCCCACCATAGGGCATGATGTGCAGGTCTAAGCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS GCA 90 bp | GCAATTAGTAGTGGCTGGAAGACATGGGACCCTCGGGATGGAAGTTaGTGTAACAGTCGGAACATGGAGCCGTCCCAGCGCATGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: AISSGWKTWDPRDGS*CNSRNMEPSQRMTM Trigger: CATGGTCATGCGCTGGGACGGCTCCATGTTCCGACTGTTACAGCAACTTCCATCCCGAGGGTCCCATGTCTTCCAGCCACTACTAATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 90 bp | TCGCTGCCCAGGATAGCCAACTGGTCTCTGGCAATTAGTAGTGGCTaGAAGACATGGGACCCTCGGGATGGAAGTTGCTGTAACAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLPRIANWSLAISSG*KTWDPRDGSCCNSR Trigger: CCGACTGTTACAGCAACTTCCATCCCGAGGGTCCCATGTCTTCCAGCCACTACTAATTGCCAGAGACCAGTTGGCTATCCTGGGCAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 90 bp | TGTAGTGGCTCCAGGATCCCTTTATCGGACTCAAAGCGGAAGACTTaGCTGAAGGCGAAGTCGCTGCCCAGGATAGCCAACTGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSGSRIPLSDSKRKT*LKAKSLPRIANWSL Trigger: CAGAGACCAGTTGGCTATCCTGGGCAGCGACTTCGCCTTCAGCCAAGTCTTCCGCTTTGAGTCCGATAAAGGGATCCTGGAGCCACTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGTCATCACCTGCCACTCAACAAGAAGCTCCTGCCTTGAGCCCACAGAGCCAGCCTGAAAGTGTTTaGTGGCATAGACGTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PESSPATQQEAPALSPQSQPESV*WHRRPL Trigger: CAGAGGACGTCTATGCCACAAAACACTTTCAGGCTG...GCTCTGTGGGCTCAAGGCAGGAGCTTCTTGTTGAGTGGCAGGTGATGACTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 90 bp | CCACCCATGCATGGGAGCCTGAGACCAGAGGATTGCTGCAAGTGTTaGGGCCAGCTTGAACTTCATAGTGAAACACTGTCTCTGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPMHGSLRPEDCCKC*GQLELHSETLSLWL Trigger: GAGCCACAGAGACAGTGTTTCACTATGAAGTTCAAGCTGGCCTCAACACTTGCAGCAATCCTCTGGTCTCAGGCTCCCATGCATGGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGTCTCCAAGCCTCGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTTGGAGATGGAGCCAATCTaGTTGTCCTCAATGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVSKPRNRNLGRASRWLEMEPI*LSSMKR Trigger: CCTCTTCATTGAGGACAACAAGATTGGCTCCATCTC...CAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCGAGGCTTGGAGACTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS-3UTR CAA 90 bp | CTCGTACATTCTGTTCTTGCCCCCGTCACATTCTGGAAAGGGGTACCCAGTGATCTCAAAGCGGAAGACTaGGCTGAAGGCGAAGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVHSVLAPVTFWKGVPSDLKAED*AEGEVA Trigger: AGCGACTTCGCCTTCAGCCAAGTCTTCCGCTTTGAG...ATCACTGGGTACCCCTTTCCAGAATGTGACGGGGGCAAGAACAGAATGTACGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 90 bp | AGGATAGCCAACTGGTCTCTGGCAATTAGTAGTGGCTGGAAGACATaGGACCCTCGGGATGGAAGTTGCTGTAACAGTCGGAACATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RIANWSLAISSGWKT*DPRDGSCCNSRNME Trigger: CTCCATGTTCCGACTGTTACAGCAACTTCCATCCCGAGGGTCCCATGTCTTCCAGCCACTACTAATTGCCAGAGACCAGTTGGCTATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CAA 90 bp | CGGAACAGGAATCTGGGTAGAGCCTCGAGGTGGTTGTTGGCCAGGCTTCTGATGATTACAGAGAAGGTATaGGATGTGAAGAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RNRNLGRASRWLLARLLMITEKV*DVKRSR Trigger: CCTGCTCCTCTTCACATCCAATACCTTCTCTGTAAT...CATCAGAAGCCTGGCCAACAACCACCTCGAGGCTCTACCCAGATTCCTGTTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS GCA 90 bp | TCACCCTCAATTACAGAGAAGGTATTGGATGTGAAGAGGAGCAGGTaGAATGACGGCATCTTTAAGAAGCTGCCAGCCTTCAGCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPSITEKVLDVKRSR*NDGIFKKLPAFSRE Trigger: CTCCCGGCTGAAGGCTGGCAGCTTCTTAAAGATGCCGTCATTGCACCTGCTCCTCTTCACATCCAATACCTTCTCTGTAATTGAGGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039775.9 ENSMUST00000169785.8 |
||
| CDS-3UTR CAA 90 bp | GCAACCAAAGTACTCTGCAGTCGCACTGGAACGGGTTACCACGGAGGTCCACATATGGAGCCAATCTTGTaGTCCTCAATGAAGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ATKVLCSRTGTGYHGGPHMEPIL*SSMKRY Trigger: GTACCTCTTCATTGAGGACAACAAGATTGGCTCCAT...ATGTGGACCTCCGTGGTAACCCGTTCCAGTGCGACTGCAGAGTACTTTGGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGAATGGGTGCAAAAGAGGGATTCCCAAAAGTGGATGCTTACAGCGTCTTCCTGAGACCAGAGGATaGCTGCAAGTGTTGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALNGCKRGIPKSGCLQRLPETRG*LQVLRP Trigger: TGGCCTCAACACTTGCAGCAATCCTCTGGTCTCAGG...AAGACGCTGTAAGCATCCACTTTTGGGAATCCCTCTTTTGCACCCATTCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCAGCTCACAACTGCTGAAGATGGACCAGTTAAAAGAGCACAGGTCCTGATGGAGCCAATCTTGTaGTCCTCAATGAAGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QAQLTTAEDGPVKRAQVLMEPIL*SSMKRY Trigger: GTACCTCTTCATTGAGGACAACAAGATTGGCTCCAT...CAGGACCTGTGCTCTTTTAACTGGTCCATCTTCAGCAGTTGTGAGCTGAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CAA 90 bp | ATAGCCAATGGCCAGATTGGGTTTAAGTGGAAAGGAATGCTCTCTCTCGGTACTGAGATGGAGCCAATCTaGTTGTCCTCAATGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IANGQIGFKWKGMLSLGTEMEPI*LSSMKR Trigger: CCTCTTCATTGAGGACAACAAGATTGGCTCCATCTC...AGTACCGAGAGAGAGCATTCCTTTCCACTTAAACCCAATCTGGCCATTGGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CAA 90 bp | ATAGCCAATGGCCAGATTGGGTTTAAGTGGAAAGGAATGCTCTCTCTCGGTACTATTACAGAGAAGGTATaGGATGTGAAGAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IANGQIGFKWKGMLSLGTITEKV*DVKRSR Trigger: CCTGCTCCTCTTCACATCCAATACCTTCTCTGTAAT...AGTACCGAGAGAGAGCATTCCTTTCCACTTAAACCCAATCTGGCCATTGGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS-3UTR CAA 90 bp | AATGCCAACCTTGTCTGTGAATTGAGATCCTGTGGCTCTACACTTGAACTTCTTATTACAGAGAAGGTATaGGATGTGAAGAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NANLVCELRSCGSTLELLITEKV*DVKRSR Trigger: CCTGCTCCTCTTCACATCCAATACCTTCTCTGTAAT...AAGAAGTTCAAGTGTAGAGCCACAGGATCTCAATTCACAGACAAGGTTGGCATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164725.3 |
||
| CDS TCA 72 bp | GCGTGGGCCCAGCACCAGAGGCTTGCAGGACACCACTaGGGGCGCAGACAGCTCCTCCTCAGGCCTGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: AWAQHQRLAGHH*GRRQLLLRPEA Trigger: CGCTTCAGGCCTGAGGAGGAGCTGTCTGCGCCCTCAGTGGTGTCCTGCAAGCCTCTGGTGCTGGGCCCACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 72 bp | CAGACGCAGGTCGGGGCTGGACCGCGACCACAGCTGTaGGCCTCCCCACAGGCGGGCAGCCAGTATGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QTQVGAGPRPQL*ASPQAGSQYEE Trigger: CTCTTCATACTGGCTGCCCGCCTGTGGGGAGGCTCACAGCTGTGGTCGCGGTCCAGCCCCGACCTGCGTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CAA 90 bp | AGGCGGGCAGCCAGTATGAAGAGGCGTGGGCCCAGCACCAGAGGCTaGCAGGACACCACTGAGGGCGCAGACAGCTCCTCCTCAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRAASMKRRGPSTRG*QDTTEGADSSSSGL Trigger: CAGGCCTGAGGAGGAGCTGTCTGCGCCCTCAGTGGTGTCCTGCAAGCCTCTGGTGCTGGGCCCACGCCTCTTCATACTGGCTGCCCGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 72 bp | ACAGCTGTGAGCCTCCCCACAGGCGGGCAGCCAGTATaGAGAGGCGTGGGCCCAGCACCAGAGGCTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TAVSLPTGGQPV*RGVGPAPEACR Trigger: CCTGCAAGCCTCTGGTGCTGGGCCCACGCCTCTTCATACTGGCTGCCCGCCTGTGGGGAGGCTCACAGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 72 bp | CAGAGGAGCTCGGCATCATTGGGTCGCAGCAGCCGTTaGGGGGCTAGGACCTGCACGGGGGTCAGACGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QRSSASLGRSSR*GARTCTGVRRR Trigger: CCTGCGTCTGACCCCCGTGCAGGTCCTAGCCCCTCAACGGCTGCTGCGACCCAATGATGCCGAGCTCCTCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 72 bp | AGGGCTGCCCATCCAGCCAGAGGAGCTCGGCATCATTaGGTCGCAGCAGCCGTTGAGGGGCTAGGACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RAAHPARGARHH*VAAAVEGLGPA Trigger: TGCAGGTCCTAGCCCCTCAACGGCTGCTGCGACCCAATGATGCCGAGCTCCTCTGGCTGGATGGGCAGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS GCA 72 bp | CCAGCCTTGGAGGCATCAGCCACCACGAAGCAGGGCTaGCCATCCAGCCAGAGGAGCTCGGCATCATTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PALEASATTKQG*PSSQRSSASLG Trigger: ACCCAATGATGCCGAGCTCCTCTGGCTGGATGGGCAGCCCTGCTTCGTGGTGGCTGATGCCTCCAAGGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 72 bp | ACCAACCCAGTGAAAGAGCACAGGCCTCTGGGAGGCTaGAGCAAGCAGCAGATGCGGTCGGCCATCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TNPVKEHRPLGG*SKQQMRSAIQL Trigger: GAGCTGGATGGCCGACCGCATCTGCTGCTTGCTTCAGCCTCCCAGAGGCCTGTGCTCTTTCACTGGGTTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 72 bp | AGCACGCTGCGAATAGAAAGCGTCTTCCTGCTACGGTaGCTTGGGCAAAGGCTCGAGGGGCCACCAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: STLRIESVFLLR*LGQRLEGPPRP Trigger: CGGCCTTGGTGGCCCCTCGAGCCTTTGCCCAAGTCACCGTAGCAGGAAGACGCTTTCTATTCGCAGCGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS GCA 72 bp | TTGTGGCATAGACGTCCTCTGCCTCTGGGATGTCCGTaGGCCTCTCGAAGCGGCCACCAACCCAGTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LWHRRPLPLGCP*ASRSGHQPSER Trigger: TCTTTCACTGGGTTGGTGGCCGCTTCGAGAGGCGCACGGACATCCCAGAGGCAGAGGACGTCTATGCCACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS GCA 72 bp | TCCAGCCTGAAAGTGTTTTGTGGCATAGACGTCCTCTaGCTCTGGGATGTCCGTGCGCCTCTCGAAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLKVFCGIDVL*LWDVRAPLEAA Trigger: GGCCGCTTCGAGAGGCGCACGGACATCCCAGAGGCAGAGGACGTCTATGCCACAAAACACTTTCAGGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 72 bp | CTGAAAGTGTTTTGTGGCATAGACGTCCTCTGCCTCTaGGATGTCCGTGCGCCTCTCGAAGCGGCCACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LKVFCGIDVLCL*DVRAPLEAATN Trigger: GTTGGTGGCCGCTTCGAGAGGCGCACGGACATCCCAGAGGCAGAGGACGTCTATGCCACAAAACACTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CAA 90 bp | ATCGCGTCAGGCACAGGAACACATCTCCTCCAGCCTGAAAGTGTTTaGTGGCATAGACGTCCTCTGCCTCTGGGATGTCCGTGCGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IASGTGTHLLQPESV*WHRRPLPLGCPCAS Trigger: AGAGGCGCACGGACATCCCAGAGGCAGAGGACGTCTATGCCACAAAACACTTTCAGGCTGGAGGAGATGTGTTCCTGTGCCTGACGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CAA 90 bp | CTCTGTGGCTCTACACTTGAACTTCTTAGGGTCAAGGTGATTCAGTaGTATCTGAGCAACGGCAGGGGGACCCGCACAGGCCCCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCGSTLELLRVKVIQ*YLSNGRGTRTGPCA Trigger: GGCACAGGGGCCTGTGCGGGTCCCCCTGCCGTTGCTCAGATACAACTGAATCACCTTGACCCTAAGAAGTTCAAGTGTAGAGCCACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| CDS CCA 72 bp | AAGGACTCCACGCTCAGTGCCGACTCCCCAACAGTCTaGAGCCAGGACAGTTCTGTGGCTCTACACTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KDSTLSADSPTV*SQDSSVALHLN Trigger: GTTCAAGTGTAGAGCCACAGAACTGTCCTGGCTCCAGACTGTTGGGGAGTCGGCACTGAGCGTGGAGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CAA 90 bp | TTCTGTGGCTCTACACTTGAACTTCTTAGGGTCAAGGTGATTCAGTaGTATCTGAGCAACGGCAGGGGGACCCGCACAGGCCCCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FCGSTLELLRVKVIQ*YLSNGRGTRTGPCA Trigger: GGCACAGGGGCCTGTGCGGGTCCCCCTGCCGTTGCTCAGATACAACTGAATCACCTTGACCCTAAGAAGTTCAAGTGTAGAGCCACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 72 bp | TCCAGGATCCCTTTATCGGACTCAAAGCGGAAGACTTaGCTGAAGGCGAAGTCGCTGCCCAGGATAGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRIPLSDSKRKT*LKAKSLPRIAN Trigger: GTTGGCTATCCTGGGCAGCGACTTCGCCTTCAGCCAAGTCTTCCGCTTTGAGTCCGATAAAGGGATCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CAA 72 bp | CTCCAGGATCCCTTTATCGGACTCAAAGCGGAAGACTaGGCTGAAGGCGAAGTCGCTGCCCAGGATAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQDPFIGLKAED*AEGEVAAQDSQ Trigger: TTGGCTATCCTGGGCAGCGACTTCGCCTTCAGCCAAGTCTTCCGCTTTGAGTCCGATAAAGGGATCCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 72 bp | CCAATTCATGGTGCTGGTAGATCTGCGTGGGGCCCTTaGAGCACGCTGCGAATAGAAAGCGTCTTCCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PIHGAGRSAWGP*STLRIESVFLL Trigger: TAGCAGGAAGACGCTTTCTATTCGCAGCGTGCTTCAAGGGCCCCACGCAGATCTACCAGCACCATGAATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 72 bp | ACAGGAACACATCTCCTCCAGCCTGAAAGTGTTTTGTaGCATAGACGTCCTCTGCCTCTGGGATGTCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TGTHLLQPESVL*HRRPLPLGCPC Trigger: GCACGGACATCCCAGAGGCAGAGGACGTCTATGCCACAAAACACTTTCAGGCTGGAGGAGATGTGTTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CAA 90 bp | GATACACACAGGTGGGTGAGTGAGCGAAGTCCCCTCAGGGCGTTCTaGGAGATGGAGCCAATCTTGTTGTCCTCAATGAAGAGGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: DTHRWVSERSPLRAF*EMEPILLSSMKRYC Trigger: GCAGTACCTCTTCATTGAGGACAACAAGATTGGCTCCATCTCCAAGAACGCCCTGAGGGGACTTCGCTCACTCACCCACCTGTGTGTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169785.8 |
||
| CDS CCA 72 bp | AACTGGTCTCTGGCAATTAGTAGTGGCTGGAAGACATaGGACCCTCGGGATGGAAGTTGCTGTAACAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: NWSLAISSGWKT*DPRDGSCCNSR Trigger: CCGACTGTTACAGCAACTTCCATCCCGAGGGTCCCATGTCTTCCAGCCACTACTAATTGCCAGAGACCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS CCA 72 bp | AGGATAGCCAACTGGTCTCTGGCAATTAGTAGTGGCTaGAAGACATGGGACCCTCGGGATGGAAGTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RIANWSLAISSG*KTWDPRDGSCC Trigger: ACAGCAACTTCCATCCCGAGGGTCCCATGTCTTCCAGCCACTACTAATTGCCAGAGACCAGTTGGCTATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039775.9 |
||
| CDS TCA 72 bp | CATGGGAGCCTGAGACCAGAGGATTGCTGCAAGTGTTaGGGCCAGCTTGAACTTCATAGTGAAACACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HGSLRPEDCCKC*GQLELHSETLS Trigger: AGACAGTGTTTCACTATGAAGTTCAAGCTGGCCTCAACACTTGCAGCAATCCTCTGGTCTCAGGCTCCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172001.2 |
||
| CDS CAA 72 bp | CCGATGAAGGCATCACCCTCAATTACAGAGAAGGTATaGGATGTGAAGAGGAGCAGGTGCAATGACGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PMKASPSITEKV*DVKRSRCNDGI Trigger: GATGCCGTCATTGCACCTGCTCCTCTTCACATCCAATACCTTCTCTGTAATTGAGGGTGATGCCTTCATCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039775.9 ENSMUST00000169785.8 |
||
| CDS GCA 72 bp | ATTACAGAGAAGGTATTGGATGTGAAGAGGAGCAGGTaGAATGACGGCATCTTTAAGAAGCTGCCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ITEKVLDVKRSR*NDGIFKKLPAF Trigger: GAAGGCTGGCAGCTTCTTAAAGATGCCGTCATTGCACCTGCTCCTCTTCACATCCAATACCTTCTCTGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039775.9 ENSMUST00000169785.8 |
||
| CDS TCA 72 bp | AGGCATCACCCTCAATTACAGAGAAGGTATTGGATGTaGAGAGGAGCAGGTGCAATGACGGCATCTTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RHHPQLQRRYWM*RGAGAMTASLR Trigger: TCTTAAAGATGCCGTCATTGCACCTGCTCCTCTTCACATCCAATACCTTCTCTGTAATTGAGGGTGATGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039775.9 ENSMUST00000169785.8 |
||