Pregenerated sensors for LGI3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033595Ensembl transcript IDs: ENSMUST00000047331.8, ENSMUST00000226548.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCAGGGCTGCTGCTCCCAGAGGACAGCAGAGGGCAGCAGAGGCCTaGTTCCCAGGTGTCCCTCCCTGCCATCCTCATCCAGCCTCCACC | + |
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Preference number: 1 (lower is better) Translates to: FRAAAPRGQQRAAEA*FPGVPPCHPHPAST Trigger: GGTGGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGGGAACCAGGCCTCTGCTGCCCTCTGCTGTCCTCTGGGAGCAGCAGCCCTGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CCA 90 bp | CCTGACCCCACACCTCTCCCTCCAGGGGTATGCTCTCTGCGGGACTaGATTCAGAAGGGTGTGCCCTCTGTGGCATTGTGGGAAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: PDPTPLPPGVCSLRD*IQKGVPSVALWEEA Trigger: TGCCTCTTCCCACAATGCCACAGAGGGCACACCCTTCTGAATCCAGTCCCGCAGAGAGCATACCCCTGGAGGGAGAGGTGTGGGGTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR CCA 90 bp | TGTGTGTGTAGCTACATAGACAGGCTGGCCACCTGTGACTTCACTTaGGGCCACAAGTTGCTCACAGAGGTCCCCACCCATCGTACAGTG | + |
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Preference number: 1 (lower is better) Translates to: CVCSYIDRLATCDFT*GHKLLTEVPTHRTV Trigger: CACTGTACGATGGGTGGGGACCTCTGTGAGCAACTTGTGGCCCCAAGTGAAGTCACAGGTGGCCAGCCTGTCTATGTAGCTACACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 90 bp | GTTTGCCCAGCACCTAGTCCGCTCACGTACACACCCCCAGACGTGTaGAGATACAGAATCAGAAGTGTGGTGGGGTATGCACAAGTATGC | + |
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Preference number: 1 (lower is better) Translates to: VCPAPSPLTYTPPDV*RYRIRSVVGYAQVC Trigger: GCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACGTCTGGGGGTGTGTACGTGAGCGGACTAGGTGCTGGGCAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 90 bp | GTATGCACAAGTATGCAGCTGAGTTTGTCCATCAGTGTCCACAGGTaGATGCAGAAGGAGCATGGCGTGGGCAGGCACACTTGGAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: VCTSMQLSLSISVHR*MQKEHGVGRHTWKC Trigger: ACACTTCCAAGTGTGCCTGCCCACGCCATGCTCCTTCTGCATGCACCTGTGGACACTGATGGACAAACTCAGCTGCATACTTGTGCATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR TCA 90 bp | GATCCGCATCTCAAAGATAGGGTGAGAGAGGAGATGGCCCGAGCTTaGAAAAGCAATAGCTATCCAGAGAAAGCCTTCCCACCCGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: DPHLKDRVREEMARA*KSNSYPEKAFPPVS Trigger: GGACACGGGTGGGAAGGCTTTCTCTGGATAGCTATTGCTTTTTCAAGCTCGGGCCATCTCCTCTCTCACCCTATCTTTGAGATGCGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 90 bp | TACTGCACTGTGAAGAACCCAGTTGCTGCTGCCTCTTGTTATTATTaGTTCTGGATGAAGTGGCTTTGTCCCCACGAGGCCATGGTCACG | + |
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Preference number: 1 (lower is better) Translates to: YCTVKNPVAAASCYY*FWMKWLCPHEAMVT Trigger: CGTGACCATGGCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CCA 90 bp | CGTACACACCCCCAGACGTGTGCAGATACAGAATCAGAAGTGTGGTaGGGTATGCACAAGTATGCAGCTGAGTTTGTCCATCAGTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: RTHPQTCADTESEVW*GMHKYAAEFVHQCP Trigger: TGGACACTGATGGACAAACTCAGCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACGTCTGGGGGTGTGTACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR TCA 90 bp | AAAAGCAATAGCTATCCAGAGAAAGCCTTCCCACCCGTGTCCCTTTaGGCTGGGACTGAGTCGTGGAAGAAAACTCTAGTGAGGAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: KSNSYPEKAFPPVSL*AGTESWKKTLVRRA Trigger: AGCTCTCCTCACTAGAGTTTTCTTCCACGACTCAGTCCCAGCTCAAAGGGACACGGGTGGGAAGGCTTTCTCTGGATAGCTATTGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CCA 90 bp | TCACGTACACACCCCCAGACGTGTGCAGATACAGAATCAGAAGTGTaGTGGGGTATGCACAAGTATGCAGCTGAGTTTGTCCATCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: SRTHPQTCADTESEV*WGMHKYAAEFVHQC Trigger: ACACTGATGGACAAACTCAGCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACGTCTGGGGGTGTGTACGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CCA 90 bp | AACCCAGTTGCTGCTGCCTCTTGTTATTATTGCTTCTGGATGAAGTaGCTTTGTCCCCACGAGGCCATGGTCACGTTTTCTGTTGCTATC | + |
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Preference number: 1 (lower is better) Translates to: NPVAAASCYYCFWMK*LCPHEAMVTFSVAI Trigger: GATAGCAACAGAAAACGTGACCATGGCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 90 bp | CTAGTGAGGAGAGCTATACTGCACTGTGAAGAACCCAGTTGCTGCTaGCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTTGTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: LVRRAILHCEEPSCC*LLLLLLLDEVALSP Trigger: TGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCTCACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 90 bp | ACTCTAGTGAGGAGAGCTATACTGCACTGTGAAGAACCCAGTTGCTaGTGCCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: TLVRRAILHCEEPSC*CLLLLLLLDEVALS Trigger: GGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCTCACTAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 90 bp | AAAACTCTAGTGAGGAGAGCTATACTGCACTGTGAAGAACCCAGTTaGTGCTGCCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: KTLVRRAILHCEEPS*CCLLLLLLLDEVAL Trigger: CAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCTCACTAGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CCA 90 bp | ACAGGTTTACCCTACACATCTAATGTGCATTTGAGAAAGGCTGTGTaGTCCTTGAAGAATCCCAGTTTGGAAGGCTCTCAGTTAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: TGLPYTSNVHLRKAV*SLKNPSLEGSQLVT Trigger: TGTAACTAACTGAGAGCCTTCCAAACTGGGATTCTTCAAGGACCACACAGCCTTTCTCAAATGCACATTAGATGTGTAGGGTAAACCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGAGGCCTGGTTCCCAGGTGTCCCTCCCTGCCATCCTCATCCAGCCTCCCTAGTCCCTGGTGTGTaGCCAGGCCCACTTCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: AAEAWFPGVPPCHPHPASLVPGV*PGPLLC Trigger: ACAAAGAAGTGGGCCTGGGCACACACCAGGGACTAG...GGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGGGAACCAGGCCTCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGGAATGGCTCCCCTGGGCTAGTCCCTGGTGTGTGCCCAGGCCCACTTCTTCAGGCTGGCCACCTGTaGCTTCACTTGGGGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: NGNGSPGLVPGVCPGPLLQAGHL*LHLGPQ Trigger: TTGTGGCCCCAAGTGAAGTCACAGGTGGCCAGCCTG...AAGAAGTGGGCCTGGGCACACACCAGGGACTAGCCCAGGGGAGCCATTCCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGACCCCACACCTCTCCCTCCAGGGGTATGCTCTCTGCGGGACTGGATTCAGCCCTCTGTGGCATTGTaGGAAGAGGCAGGGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: PDPTPLPPGVCSLRDWIQPSVAL*EEAGFR Trigger: CCTGAACCCTGCCTCTTCCCACAATGCCACAGAGGG...CTGAATCCAGTCCCGCAGAGAGCATACCCCTGGAGGGAGAGGTGTGGGGTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTGTCCCTCCCTGCCATCCTCATCCAGCCTCCACCGAGCTGTGCCTCCGGAAGTGTGGTGGGGTATaGACAAGTATGCAGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: PGVPPCHPHPASTELCLRKCGGV*TSMQLS Trigger: ACTCAGCTGCATACTTGTGCATACCCCACCACACTT...CCGGAGGCACAGCTCGGTGGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGACACGCTACCCTGGGCTAGTCCCTaGTGTGTGCCCAGGCCCACT | + |
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Preference number: 2 (lower is better) Translates to: EKAVAHPFLHSLCYSDTLPWASP*CVPRPT Trigger: AGTGGGCCTGGGCACACACCAGGGACTAGCCCAGGG...TAGCGTGTCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCCTCAAACCCAAGTCCTCCCCGTCTCTGAGCACCCTAACCCTGACCCCAAGGGTGTGCCCTCTGTaGCATTGTGGGAAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EALKPKSSPSLSTLTLTPRVCPL*HCGKRQ Trigger: CTGCCTCTTCCCACAATGCCACAGAGGGCACACCCT...TGGGGTCAGGGTTAGGGTGCTCAGAGACGGGGAGGACTTGGGTTTGAGGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCCCTCAAACCCAAGTCCTCCCCGTCTCTGAGCACCCTAACCCTGACCCCAGGATTCAGAAGGGTGTaGCCTCTGTGGCATTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: EALKPKSSPSLSTLTLTPGFRRV*PLWHCG Trigger: CCCACAATGCCACAGAGGGCACACCCTTCTGAATCC...TGGGGTCAGGGTTAGGGTGCTCAGAGACGGGGAGGACTTGGGTTTGAGGGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTGTCCCTCCCTGCCATCCTCATCCAGCCTCCACCGAGCTGTGCCTCCGGGCCTCTTGTTATTATTaGTTCTGGATGAAGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PGVPPCHPHPASTELCLRASCYY*FWMKWL Trigger: AAGCCACTTCATCCAGAAGCAATAATAACAAGAGGC...CCGGAGGCACAGCTCGGTGGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CAA 90 bp | AAGCTGAGAAGAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTaGTTACTCAGACACGCTAGCAACGGAGCAGAGCAGGGAACACTG | + |
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Preference number: 2 (lower is better) Translates to: KLRREGCGSPLPALA*LLRHASNGAEQGTL Trigger: CAGTGTTCCCTGCTCTGCTCCGTTGCTAGCGTGTCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATAGCTATCCAGAGAAAGCCTTCCCACCCGTGTCCCTTTGAGCTGGGACTGGAGAAGAGAAGGCTGTaGCTCACCCCTTCCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: AIAIQRKPSHPCPFELGLEKRRL*LTPSCT Trigger: AGTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTC...CAGTCCCAGCTCAAAGGGACACGGGTGGGAAGGCTTTCTCTGGATAGCTATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCAGGCCGCAAGAAATCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCACACAGGGGGCACACTaGGGAGAGCAGAGAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: ASGRKKSSQPDHFLLQGCTQGAH*GEQRKC Trigger: ACACTTTCTCTGCTCTCCCCAGTGTGCCCCCTGTGT...GCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGATTTCTTGCGGCCTGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR GCA 90 bp | CAACATGTTCCTGGCGCCCACACAAGTAGCTCAGGCTGTCTCAGGATTCTTGCCGGCTGCAACTGTGGATaGCAAACAGGTACACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: QHVPGAHTSSSGCLRILAGCNCG*QTGTQA Trigger: TGCTTGTGTACCTGTTTGGCATCCACAGTTGCAGCC...GGCAAGAATCCTGAGACAGCCTGAGCTACTTGTGTGGGCGCCAGGAACATGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR GCA 90 bp | GCATCAGGCCGCAAGAAATCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCACACCCCCAGACGTGTaGAGATACAGAATCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASGRKKSSQPDHFLLQGCTPPDV*RYRIRS Trigger: ACTTCTGATTCTGTATCTGCACACGTCTGGGGGTGT...GCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGATTTCTTGCGGCCTGATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CAA 90 bp | ATACTGCACTGTGAAGAACCCAGTTGCTGCTGCCTCTTGTTATTATaGCTTCTGGATGAAGTGGCTTTGTCCCCACGAGGCCATGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: ILHCEEPSCCCLLLL*LLDEVALSPRGHGH Trigger: GTGACCATGGCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CAA 90 bp | AGGAGAGCTATACTGCACTGTGAAGAACCCAGTTGCTGCTGCCTCTaGTTATTATTGCTTCTGGATGAAGTGGCTTTGTCCCCACGAGGC | + |
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Preference number: 2 (lower is better) Translates to: RRAILHCEEPSCCCL*LLLLLDEVALSPRG Trigger: GCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR GCA 90 bp | CAACATGTTCCTGGCGCCCACACAAGTAGCTCAGGCTGTCTCAGGATTCTTGCCGAACCCAGTTGCTGCTaGCTCTTGTTATTATTGCTT | + |
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Preference number: 2 (lower is better) Translates to: QHVPGAHTSSSGCLRILAEPSCC*LLLLLL Trigger: AAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTC...GGCAAGAATCCTGAGACAGCCTGAGCTACTTGTGTGGGCGCCAGGAACATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGTGCAGATACAGAATCAGAAGTGTGGTGGGGTATGCACAAGTATGCAGCTGACACTGGGTGCCTGGTaGATACGTAGGTGCTTATTA | + |
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Preference number: 2 (lower is better) Translates to: RVQIQNQKCGGVCTSMQLTLGAW*IRRCLL Trigger: TAATAAGCACCTACGTATGCACCAGGCACCCAGTGT...CAGCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCTGCTCCCAGAGGACAGCATGTTATTATTGCTTCTaGATGAAGTGGCTTTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SSQPDHFLLQGCCSQRTACYYCF*MKWLCP Trigger: GGGACAAAGCCACTTCATCCAGAAGCAATAATAACA...TGCTGTCCTCTGGGAGCAGCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CAA 90 bp | TTGAAGAATCCCAGTTTGGAAGGCTCTCAGTTAGTTACATCTAACTaGACTTCACCTTCACGAAGCCCTCAAACCCAAGTCCTCCCCGTC | + |
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Preference number: 2 (lower is better) Translates to: LKNPSLEGSQLVTSN*TSPSRSPQTQVLPV Trigger: GACGGGGAGGACTTGGGTTTGAGGGCTTCGTGAAGGTGAAGTCAAGTTAGATGTAACTAACTGAGAGCCTTCCAAACTGGGATTCTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR CAA 90 bp | AGTTGCTGCTGCCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTaGTCCCCACGAGGCCATGGTCACGTTTTCTGTTGCTATCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: SCCCLLLLLLLDEVA*SPRGHGHVFCCYPY Trigger: ATAAGGATAGCAACAGAAAACGTGACCATGGCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CAA 90 bp | CATTCAAACAAACACACAGGTTTACCCTACACATCTAATGTGCATTaGAGAAAGGCTGTGTGGTCCTTGAAGAATCCCAGTTTGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: HSNKHTGLPYTSNVH*RKAVWSLKNPSLEG Trigger: GCCTTCCAAACTGGGATTCTTCAAGGACCACACAGCCTTTCTCAAATGCACATTAGATGTGTAGGGTAAACCTGTGTGTTTGTTTGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR CAA 90 bp | AATGTGCATTTGAGAAAGGCTGTGTGGTCCTTGAAGAATCCCAGTTaGGAAGGCTCTCAGTTAGTTACATCTAACTTGACTTCACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: NVHLRKAVWSLKNPS*EGSQLVTSNLTSPS Trigger: TGAAGGTGAAGTCAAGTTAGATGTAACTAACTGAGAGCCTTCCAAACTGGGATTCTTCAAGGACCACACAGCCTTTCTCAAATGCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR CAA 90 bp | TTACCCTACACATCTAATGTGCATTTGAGAAAGGCTGTGTGGTCCTaGAAGAATCCCAGTTTGGAAGGCTCTCAGTTAGTTACATCTAAC | + |
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Preference number: 2 (lower is better) Translates to: LPYTSNVHLRKAVWS*KNPSLEGSQLVTSN Trigger: GTTAGATGTAACTAACTGAGAGCCTTCCAAACTGGGATTCTTCAAGGACCACACAGCCTTTCTCAAATGCACATTAGATGTGTAGGGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR GCA 72 bp | AGGGCAGCAGAGGCCTGGTTCCCAGGTGTCCCTCCCTaGCATCCTCATCCAGCCTCCACCGAGCTGTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: RAAEAWFPGVPP*HPHPASTELCL Trigger: GAGGCACAGCTCGGTGGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGGGAACCAGGCCTCTGCTGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 72 bp | CAGGGGGCACACTGGGGAGAGCAGAGAAAGTGTGGGTaGTGTAGGCACCCTCCAAGAAGAGCAGCTACGGGG | + |
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Preference number: 3 (lower is better) Translates to: QGAHWGEQRKCG*CRHPPRRAATG Trigger: CCCCGTAGCTGCTCTTCTTGGAGGGTGCCTACAGCACCCACACTTTCTCTGCTCTCCCCAGTGTGCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 72 bp | GGCTGGCCACCTGTGACTTCACTTGGGGCCACAAGTTaGTCACAGAGGTCCCCACCCATCGTACAGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GWPPVTSLGATS*SQRSPPIVQCH Trigger: GTGGCACTGTACGATGGGTGGGGACCTCTGTGAGCAACTTGTGGCCCCAAGTGAAGTCACAGGTGGCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 72 bp | GCAGAGCAGGGAACACTGAAGATCAGGGGCTGTTGGTaGGCACATAGAGAGCCTGGACACTGGGTGCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: AEQGTLKIRGCW*AHREPGHWVPG Trigger: ACCAGGCACCCAGTGTCCAGGCTCTCTATGTGCGCACCAACAGCCCCTGATCTTCAGTGTTCCCTGCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CCA 72 bp | TCAGTGTCCACAGGTGCATGCAGAAGGAGCATGGCGTaGGCAGGCACACTTGGAAGTGTGGGCACACCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SVSTGACRRSMA*AGTLGSVGTPA Trigger: TGCAGGTGTGCCCACACTTCCAAGTGTGCCTGCCCACGCCATGCTCCTTCTGCATGCACCTGTGGACACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CCA 72 bp | GTCCATCAGTGTCCACAGGTGCATGCAGAAGGAGCATaGCGTGGGCAGGCACACTTGGAAGTGTGGGCACAC | + |
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Preference number: 3 (lower is better) Translates to: VHQCPQVHAEGA*RGQAHLEVWAH Trigger: GTGTGCCCACACTTCCAAGTGTGCCTGCCCACGCCATGCTCCTTCTGCATGCACCTGTGGACACTGATGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR CCA 72 bp | ACACCTCTCCCTCCAGGGGTATGCTCTCTGCGGGACTaGATTCAGAAGGGTGTGCCCTCTGTGGCATTGTGG | + |
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Preference number: 3 (lower is better) Translates to: TPLPPGVCSLRD*IQKGVPSVALW Trigger: CCACAATGCCACAGAGGGCACACCCTTCTGAATCCAGTCCCGCAGAGAGCATACCCCTGGAGGGAGAGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| 3UTR-3UTR CAA 90 bp | GCATCAGGCCGCAAGAAATCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCCGTGGGCAGGCACACTaGGAAGTGTGGGCACACCTG | + |
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Preference number: 3 (lower is better) Translates to: ASGRKKSSQPDHFLLQGCRGQAH*EVWAHL Trigger: CAGGTGTGCCCACACTTCCAAGTGTGCCTGCCCACG...GCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGATTTCTTGCGGCCTGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR TCA 72 bp | TCGGGCATCCAGAGGCCAGAGAGCAGAAAGCTAAGCTaGGAAGAGAAGGCTGTGGCTCACCCCTTCCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: SGIQRPESRKLS*EEKAVAHPFLH Trigger: GTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTCAGCTTAGCTTTCTGCTCTCTGGCCTCTGGATGCCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| 3UTR GCA 72 bp | AATGGGAATGGCTCCCCTGGGCTAGTCCCTGGTGTGTaGCCAGGCCCACTTCTTTGTGTATGTGTGTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: NGNGSPGLVPGV*PGPLLCVCVCS Trigger: GCTACACACACATACACAAAGAAGTGGGCCTGGGCACACACCAGGGACTAGCCCAGGGGAGCCATTCCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR CCA 72 bp | AGCTACATAGACAGGCTGGCCACCTGTGACTTCACTTaGGGCCACAAGTTGCTCACAGAGGTCCCCACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SYIDRLATCDFT*GHKLLTEVPTH Trigger: ATGGGTGGGGACCTCTGTGAGCAACTTGTGGCCCCAAGTGAAGTCACAGGTGGCCAGCCTGTCTATGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR GCA 72 bp | AGTATGCAGCTGAGTTTGTCCATCAGTGTCCACAGGTaGATGCAGAAGGAGCATGGCGTGGGCAGGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: SMQLSLSISVHR*MQKEHGVGRHT Trigger: AGTGTGCCTGCCCACGCCATGCTCCTTCTGCATGCACCTGTGGACACTGATGGACAAACTCAGCTGCATACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR GCA 72 bp | GCACCTAGTCCGCTCACGTACACACCCCCAGACGTGTaGAGATACAGAATCAGAAGTGTGGTGGGGTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: APSPLTYTPPDV*RYRIRSVVGYA Trigger: TGCATACCCCACCACACTTCTGATTCTGTATCTGCACACGTCTGGGGGTGTGTACGTGAGCGGACTAGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR TCA 72 bp | GAAAGCCTTCCCACCCGTGTCCCTTTGAGCTGGGACTaGGTCGTGGAAGAAAACTCTAGTGAGGAGAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ESLPTRVPLSWD*VVEENSSEESY Trigger: ATAGCTCTCCTCACTAGAGTTTTCTTCCACGACTCAGTCCCAGCTCAAAGGGACACGGGTGGGAAGGCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR TCA 72 bp | CAGTTGCTGCTGCCTCTTGTTATTATTGCTTCTGGATaGAGTGGCTTTGTCCCCACGAGGCCATGGTCACGT | + |
|
Preference number: 3 (lower is better) Translates to: QLLLPLVIIASG*SGFVPTRPWSR Trigger: ACGTGACCATGGCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR GCA 72 bp | GTGAAGAACCCAGTTGCTGCTGCCTCTTGTTATTATTaGTTCTGGATGAAGTGGCTTTGTCCCCACGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: VKNPVAAASCYY*FWMKWLCPHEA Trigger: GGCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR CCA 72 bp | CACCCCCAGACGTGTGCAGATACAGAATCAGAAGTGTaGTGGGGTATGCACAAGTATGCAGCTGAGTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HPQTCADTESEV*WGMHKYAAEFV Trigger: GACAAACTCAGCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACGTCTGGGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR TCA 72 bp | ATCAGAAGTGTGGTGGGGTATGCACAAGTATGCAGCTaGGTTTGTCCATCAGTGTCCACAGGTGCATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IRSVVGYAQVCS*VCPSVSTGACR Trigger: TCTGCATGCACCTGTGGACACTGATGGACAAACTCAGCTGCATACTTGTGCATACCCCACCACACTTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR CCA 72 bp | CCCCAGACGTGTGCAGATACAGAATCAGAAGTGTGGTaGGGTATGCACAAGTATGCAGCTGAGTTTGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PQTCADTESEVW*GMHKYAAEFVH Trigger: ATGGACAAACTCAGCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACGTCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR CCA 72 bp | GCTGCTGCCTCTTGTTATTATTGCTTCTGGATGAAGTaGCTTTGTCCCCACGAGGCCATGGTCACGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AAASCYYCFWMK*LCPHEAMVTFS Trigger: AGAAAACGTGACCATGGCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR TCA 72 bp | CTCAAAGATAGGGTGAGAGAGGAGATGGCCCGAGCTTaGAAAAGCAATAGCTATCCAGAGAAAGCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LKDRVREEMARA*KSNSYPEKAFP Trigger: TGGGAAGGCTTTCTCTGGATAGCTATTGCTTTTTCAAGCTCGGGCCATCTCCTCTCTCACCCTATCTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR GCA 72 bp | CGTGTGCAGATACAGAATCAGAAGTGTGGTGGGGTATaGACAAGTATGCAGCTGAGTTTGTCCATCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVQIQNQKCGGV*TSMQLSLSISV Trigger: GACACTGATGGACAAACTCAGCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR TCA 72 bp | CAATCACACTTTGGGATCCGCATCTCAAAGATAGGGTaGGAGAGGAGATGGCCCGAGCTTGAAAAAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: QSHFGIRISKIG*ERRWPELEKAI Trigger: TATTGCTTTTTCAAGCTCGGGCCATCTCCTCTCTCACCCTATCTTTGAGATGCGGATCCCAAAGTGTGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR GCA 72 bp | AGAGCTATACTGCACTGTGAAGAACCCAGTTGCTGCTaGCTCTTGTTATTATTGCTTCTGGATGAAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RAILHCEEPSCC*LLLLLLLDEVA Trigger: AGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR GCA 72 bp | AGGAGAGCTATACTGCACTGTGAAGAACCCAGTTGCTaGTGCCTCTTGTTATTATTGCTTCTGGATGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RRAILHCEEPSC*CLLLLLLLDEV Trigger: CACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR GCA 72 bp | GTGAGGAGAGCTATACTGCACTGTGAAGAACCCAGTTaGTGCTGCCTCTTGTTATTATTGCTTCTGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: VRRAILHCEEPS*CCLLLLLLLDE Trigger: TTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR TCA 72 bp | GAAGAAAACTCTAGTGAGGAGAGCTATACTGCACTGTaGAGAACCCAGTTGCTGCTGCCTCTTGTTATTATT | + |
|
Preference number: 3 (lower is better) Translates to: EENSSEESYTAL*RTQLLLPLVII Trigger: AATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCTCACTAGAGTTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCCCTGGGCTAGTCCCTGGTGTGTGCCCAGGCCCACTTCTTTGTGTATGTACAACACCAGTAGCCTaGGCCCAGGGCCCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPGLVPGVCPGPLLCVCTTPVA*AQGPAW Trigger: CCAGGCGGGGCCCTGGGCGCAGGCTACTGGTGTTGT...ACATACACAAAGAAGTGGGCCTGGGCACACACCAGGGACTAGCCCAGGGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTGTCCCTCCCTGCCATCCTCATCCAGCCTCCACCGAGCTGTGCCTCCGGGGAGCTGTCAGCCACTaGGAAAAACCAGTCACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGVPPCHPHPASTELCLRGAVSH*EKPVTV Trigger: GACGGTGACTGGTTTTTCGCAGTGGCTGACAGCTCC...CCGGAGGCACAGCTCGGTGGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | AATGGGAATGGCTCCCCTGGGCTAGTCCCTGGTGTGTGCCCAGGCCCACTTCTTTGCACCTTGTGTTCCTaGAAGCGGGGCGGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NGNGSPGLVPGVCPGPLLCTLCS*KRGGLA Trigger: CGCCAGCCCGCCCCGCTTCCAGGAACACAAGGTGCA...AAGAAGTGGGCCTGGGCACACACCAGGGACTAGCCCAGGGGAGCCATTCCCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GCCACAAGTTGCTCACAGAGGTCCCCACCCATCGTACAGTGCCACCCTGAGGAAGGATGGTGCAGGCGCTaGCACCTGGCTGGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ATSCSQRSPPIVQCHPEEGWCRR*HLAGPE Trigger: CTCTGGCCCAGCCAGGTGCCAGCGCCTGCACCATCC...TTCCTCAGGGTGGCACTGTACGATGGGTGGGGACCTCTGTGAGCAACTTGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGTGTCCCTCCCTGCCATCCTCATCCAGCCTCCACCGAGCTGTGCCTCCGGAAGAGGTACTGCAGGTaGGACAGTCCTATGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGVPPCHPHPASTELCLRKRYCR*DSPMKA Trigger: TGCCTTCATAGGACTGTCGCACCTGCAGTACCTCTT...CCGGAGGCACAGCTCGGTGGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | CCACAAGTTGCTCACAGAGGTCCCCACCCATCGTACAGTGCCACCCTGAGGAACCCACATAGTCCCACTTaGGGATGGTGCAGGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQVAHRGPHPSYSATLRNPHSPT*GWCRRW Trigger: CCAGCGCCTGCACCATCCTCAAGTGGGACTATGTGG...GTTCCTCAGGGTGGCACTGTACGATGGGTGGGGACCTCTGTGAGCAACTTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GCCACAAGTTGCTCACAGAGGTCCCCACCCATCGTACAGTGCCACCCTGAGGAACGTGGTGTTGGTGTGTaGCAGCCACTCCACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATSCSQRSPPIVQCHPEERGVGV*QPLHQP Trigger: TGGCTGGTGGAGTGGCTGGCACACACCAACACCACG...TTCCTCAGGGTGGCACTGTACGATGGGTGGGGACCTCTGTGAGCAACTTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | CCACAAGTTGCTCACAGAGGTCCCCACCCATCGTACAGTGCCACCCTGAGGAACGAGCCACCGTGGTGTTaGTGTGTGCCAGCCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVAHRGPHPSYSATLRNEPPWC*CVPATP Trigger: TGGAGTGGCTGGCACACACCAACACCACGGTGGCTC...GTTCCTCAGGGTGGCACTGTACGATGGGTGGGGACCTCTGTGAGCAACTTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GCACATAGAGAGCCTGGACACTGGGTGCCTGGTGCATACGTAGGTGCTTATTACGGAAGCGGGGCGGGCTaGCGCAGTAGATGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHREPGHWVPGAYVGAYYGSGAG*RSRWEP Trigger: TGGCTCCCATCTACTGCGCCAGCCCGCCCCGCTTCC...GTAATAAGCACCTACGTATGCACCAGGCACCCAGTGTCCAGGCTCTCTATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGACACGCTAGGGGCCAGGAGCAGCTaGGCATCTCCAGCAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: EKAVAHPFLHSLCYSDTLGARSS*ASPAGM Trigger: CATGCCTGCTGGAGATGCCCAGCTGCTCCTGGCCCC...TAGCGTGTCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR CAA 72 bp | AGGCTGGCCACCTGTGACTTCACTTGGGGCCACAAGTaGCTCACAGAGGTCCCCACCCATCGTACAGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLATCDFTWGHK*LTEVPTHRTVP Trigger: TGGCACTGTACGATGGGTGGGGACCTCTGTGAGCAACTTGTGGCCCCAAGTGAAGTCACAGGTGGCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCCTGGGCTAGTCCCTGGTGTGTGCCCAGGCCCACTTCTTTGTGTATGTACTGGTAGATCTGGGTaGAGGAGAAGTCACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPGLVPGVCPGPLLCVCTGRSG*RRSHCP Trigger: TGGGCAGTGACTTCTCCTTCACCCAGATCTACCAGT...ACATACACAAAGAAGTGGGCCTGGGCACACACCAGGGACTAGCCCAGGGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAGAGAAAGCCTTCCCACCCGTGTCCCTTTGAGCTGGGACTGAGTCGTGGACCAGTGTTTGTCCCTTaGAACTGGGGGCCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IQRKPSHPCPFELGLSRGPVFVP*NWGPGA Trigger: TGCTCCTGGCCCCCAGTTTCAAGGGACAAACACTGG...TCCACGACTCAGTCCCAGCTCAAAGGGACACGGGTGGGAAGGCTTTCTCTGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GGCACCCTCCAAGAAGAGCAGCTACGGGGTATCAAGGACGCCGGTTTGCCCAGCTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTLQEEQLRGIKDAGLPSSLGSV*RLLLAR Trigger: TCTGGCCAACAATAACCTGCAGACACTGCCCAGAGA...GCTGGGCAAACCGGCGTCCTTGATACCCCGTAGCTGCTCTTCTTGGAGGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | CCTGACCCCACACCTCTCCCTCCAGGGGTATGCTCTCTGCGGGACTGGATTCAGTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDPTPLPPGVCSLRDWIQSLGSV*RLLLAR Trigger: TCTGGCCAACAATAACCTGCAGACACTGCCCAGAGA...CTGAATCCAGTCCCGCAGAGAGCATACCCCTGGAGGGAGAGGTGTGGGGTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR GCA 90 bp | GCATCAGGCCGCAAGAAATCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCGAGGCTGGTGGCACCTaGCTTGGAGCTGTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGRKKSSQPDHFLLQGCEAGGT*LGAVSH Trigger: GTGGCTGACAGCTCCAAGGCAGGTGCCACCAGCCTC...GCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGATTTCTTGCGGCCTGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAAGTCCTCCCCGTCTCTGAGCACCCTAACCCTGACCCCACACCTCTCCCTGACGGAAGATGTCTCTaGGCAGTGTCTGCAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TQVLPVSEHPNPDPTPLPDGRCL*AVSAGY Trigger: ATAACCTGCAGACACTGCCCAGAGACATCTTCCGTC...AGGGAGAGGTGTGGGGTCAGGGTTAGGGTGCTCAGAGACGGGGAGGACTTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCTCACAGAGGTCCCCACCCATCGTACAGTGCCACCCTGAGGAACCCAAAGTTTGCGCACGCGCTGTaGGTCGATGTCCTGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VAHRGPHPSYSATLRNPKFAHAL*VDVLQL Trigger: AAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAA...CTTTGGGTTCCTCAGGGTGGCACTGTACGATGGGTGGGGACCTCTGTGAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGAGCCAACGGTAGAGGCTaGTGGCACCTGCCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRREGCGSPLPALALLLRANGRG*WHLPWS Trigger: GCTCCAAGGCAGGTGCCACCAGCCTCTACCGTTGGC...TCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | GTACACAAGCACCTCGGGCATCCAGAGGCCAGAGAGCAGAAAGCTAAGCTGAGACAGGGAGATGACCTCTaGAGGCAGGTTCTTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHKHLGHPEAREQKAKLRQGDDL*RQVLGH Trigger: GTGCCCAAGAACCTGCCTTCAGAGGTCATCTCCCTG...TCTCAGCTTAGCTTTCTGCTCTCTGGCCTCTGGATGCCCGAGGTGCTTGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | CGGGACTGGATTCAGAAGGGTGTGCCCTCTGTGGCATTGTGGGAAGAGGCAGGGGGTGCGACAGTCCTATaGAGGCATTGTCTCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RDWIQKGVPSVALWEEAGGATVL*RHCLQS Trigger: TGATTGGAGACAATGCCTTCATAGGACTGTCGCACC...CCCTGCCTCTTCCCACAATGCCACAGAGGGCACACCCTTCTGAATCCAGTCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGAAGATGGGAGCCACCGTaGTGTTGGTGTGTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRREGCGSPLPALALLLRRWEPP*CWCVPA Trigger: GGCTGGCACACACCAACACCACGGTGGCTCCCATCT...TCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGACACGCTAAGGCTTCCAGGTCATTaGGTTTGCGCACGCGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EKAVAHPFLHSLCYSDTLRLPGH*VCARAV Trigger: CACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCT...TAGCGTGTCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGACCCAGCGCAGGATCTTaGAGTCGCCAATGTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRREGCGSPLPALALLLRPSAGS*SRQCSG Trigger: GCCGCTACATTGGCGACTCCAAGATCCTGCGCTGGG...TCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | CAACATGTTCCTGGCGCCCACACAAGTAGCTCAGGCTGTCTCAGGATTCTTGCCCTTGCAGTGCACAGCTaGAGGGGCTGGAATTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHVPGAHTSSSGCLRILALAVHS*RGWNSV Trigger: GACAGAATTCCAGCCCCTTCAGCTGTGCACTGCAAG...GGCAAGAATCCTGAGACAGCCTGAGCTACTTGTGTGGGCGCCAGGAACATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTCAAACCCAAGTCCTCCCCGTCTCTGAGCACCCTAACCCTGACCCCACACTTGAGTAACAAGAACTaGAACAACGGCAGATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALKPKSSPSLSTLTLTPHLSNKN*NNGRWE Trigger: CTCCCATCTGCCGTTGTTGCAGTTCTTGTTACTCAA...GTGTGGGGTCAGGGTTAGGGTGCTCAGAGACGGGGAGGACTTGGGTTTGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR CCA 90 bp | GTACACAAGCACCTCGGGCATCCAGAGGCCAGAGAGCAGAAAGCTAAGCTGAGATGCAACAACGGCAGATaGGAGAAGGCTCCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHKHLGHPEAREQKAKLRCNNGR*EKAPSW Trigger: CCAGGATGGAGCCTTCTCCCATCTGCCGTTGTTGCA...TCTCAGCTTAGCTTTCTGCTCTCTGGCCTCTGGATGCCCGAGGTGCTTGTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGCCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTTGTCCCCACGAGGGCTGGCGCAGTAGATaGGAGCCACCGTGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAASCYYCFWMKWLCPHEGWRSR*EPPWCW Trigger: CCAACACCACGGTGGCTCCCATCTACTGCGCCAGCC...CTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGACACGCTATTCCGCAGACACTGCTaGGAAGGACAGGGTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EKAVAHPFLHSLCYSDTLFRRHC*EGQGLV Trigger: TACCAGACCCTGTCCTTCCCAGCAGTGTCTGCGGAA...TAGCGTGTCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTTGTCCCCACGAGCCACCACCATCGGCTTaGAGTGCACAGCTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAASCYYCFWMKWLCPHEPPPSA*SAQLKG Trigger: CCCCTTCAGCTGTGCACTGCAAGCCGATGGTGGTGG...CTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTGCCTGGTGCATACGTAGGTGCTTATTACAGTAATGGGAATGGCTCCCCTCGGGAGGGAAGGGCTTaGACCTCAGAGAAACGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WVPGAYVGAYYSNGNGSPREGRA*TSEKRV Trigger: TACCCGTTTCTCTGAGGTGCAAGCCCTTCCCTCCCG...AGGGGAGCCATTCCCATTACTGTAATAAGCACCTACGTATGCACCAGGCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GACGTGTGCAGATACAGAATCAGAAGTGTGGTGGGGTATGCACAAGTATGCAGCTGGTGGCACCTGCCTTaGAGCTGTCAGCCACTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: DVCRYRIRSVVGYAQVCSWWHLP*SCQPLR Trigger: TCGCAGTGGCTGACAGCTCCAAGGCAGGTGCCACCA...GCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GCATCAGGCCGCAAGAAATCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCCGAAGAGGCAAGTCCTaGACCTTGTGTTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGRKKSSQPDHFLLQGCRRGKS*TLCSWK Trigger: CTTCCAGGAACACAAGGTGCAGGACTTGCCTCTTCG...GCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGATTTCTTGCGGCCTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCTGCTCCCAGAGGACAGCAGACGGAAGATGTCTCTaGGCAGTGTCTGCAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSQPDHFLLQGCCSQRTADGRCL*AVSAGY Trigger: ATAACCTGCAGACACTGCCCAGAGACATCTTCCGTC...TGCTGTCCTCTGGGAGCAGCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAAGAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGAGGTGCGACAGTCCTATaGAGGCATTGTCTCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LRREGCGSPLPALALLLRGATVL*RHCLQS Trigger: TGATTGGAGACAATGCCTTCATAGGACTGTCGCACC...TCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTTGTCCCCACGAGACCAGTCACCGTCGATaGGGAAGGCTTCCAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AAASCYYCFWMKWLCPHETSHRR*GRLPGH Trigger: ATGACCTGGAAGCCTTCCGCATCGACGGTGACTGGT...CTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTGCAGATACAGAATCAGAAGTGTGGTGGGGTATGCACAAGTATGCAGCTGTGTCCTGCAACTTGGTaGAACGTGTGGTGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVQIQNQKCGGVCTSMQLCPATW*NVWCWG Trigger: ACCCCAACACCACACGTTTCACCAAGTTGCAGGACA...CAGCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | TCAAACAAACACACAGGTTTACCCTACACATCTAATGTGCATTTGAGAAAGGCTACAACACCAGTAGCCTaGGCCCAGGGCCCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNKHTGLPYTSNVHLRKATTPVA*AQGPAW Trigger: CCAGGCGGGGCCCTGGGCGCAGGCTACTGGTGTTGT...AGCCTTTCTCAAATGCACATTAGATGTGTAGGGTAAACCTGTGTGTTTGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGCTATACTGCACTGTGAAGAACCCAGTTGCTGCTGCCTCTTGTTATTAACCATCGGCTTGCAGTaGACAGCTGAAGGGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRAILHCEEPSCCCLLLLTIGLQ*TAEGAG Trigger: TCCAGCCCCTTCAGCTGTGCACTGCAAGCCGATGGT...TAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GCATCAGGCCGCAAGAAATCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCCAATTAACCGTGGTTTaGCCTCACCGTCCACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ASGRKKSSQPDHFLLQGCQLTVV*PHRPQT Trigger: AGTTTGTGGACGGTGAGGGCAAACCACGGTTAATTG...GCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGATTTCTTGCGGCCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GCACATAGAGAGCCTGGACACTGGGTGCCTGGTGCATACGTAGGTGCTTATTACTCTGCAGGTTATTGTTaGCCAGAGAAAGGTGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHREPGHWVPGAYVGAYYSAGYC*PEKGVS Trigger: TGACACACCTTTCTCTGGCCAACAATAACCTGCAGA...GTAATAAGCACCTACGTATGCACCAGGCACCCAGTGTCCAGGCTCTCTATGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR CAA 72 bp | TGTGAAGAACCCAGTTGCTGCTGCCTCTTGTTATTATaGCTTCTGGATGAAGTGGCTTTGTCCCCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CEEPSCCCLLLL*LLDEVALSPRG Trigger: GCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGCCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTTGTCCCCACGAGTTGATAGATGACAGGTaGTTGCGAGCTGCTAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: AAASCYYCFWMKWLCPHELIDDR*LRAARH Trigger: GTGTCTAGCAGCTCGCAAGCACCTGTCATCTATCAA...CTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGCTATACTGCACTGTGAAGAACCCAGTTGCTGCTGCCTCTTGTTATTAGAGAAGGCTCCATCCTaGATCTCTGAGAAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRAILHCEEPSCCCLLLLEKAPS*ISEKAA Trigger: TGCTGCCTTCTCAGAGATCCAGGATGGAGCCTTCTC...TAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTATAGCTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTACCCTACACATCTAATGTGCATTTGAGAAAGGCTGTGTGGTCCTTGAAGTGCAACAACGGCAGATaGGAGAAGGCTCCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPYTSNVHLRKAVWSLKCNNGR*EKAPSW Trigger: CCAGGATGGAGCCTTCTCCCATCTGCCGTTGTTGCA...CTTCAAGGACCACACAGCCTTTCTCAAATGCACATTAGATGTGTAGGGTAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR CCA 90 bp | GCATCAGGCCGCAAGAAATCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCTGTACTGCCAGCTCTTaGAACCGTACAAATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASGRKKSSQPDHFLLQGCCTASS*NRTNFC Trigger: ACAGAAATTTGTACGGTTCCAAGAGCTGGCAGTACA...GCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGATTTCTTGCGGCCTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR CAA 72 bp | TGCCTCTTGTTATTATTGCTTCTGGATGAAGTGGCTTaGTCCCCACGAGGCCATGGTCACGTTTTCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLLLLLLDEVA*SPRGHGHVFCC Trigger: GCAACAGAAAACGTGACCATGGCCTCGTGGGGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR GCA 90 bp | GACGTGTGCAGATACAGAATCAGAAGTGTGGTGGGGTATGCACAAGTATGCAGCTTGAGTAACAAGAACTaGAACAACGGCAGATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DVCRYRIRSVVGYAQVCSLSNKN*NNGRWE Trigger: CTCCCATCTGCCGTTGTTGCAGTTCTTGTTACTCAA...GCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR TCA 90 bp | TCAAACAAACACACAGGTTTACCCTACACATCTAATGTGCATTTGAGAAAGGCTCAGGGAGATGACCTCTaGAGGCAGGTTCTTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNKHTGLPYTSNVHLRKAQGDDL*RQVLGH Trigger: GTGCCCAAGAACCTGCCTTCAGAGGTCATCTCCCTG...AGCCTTTCTCAAATGCACATTAGATGTGTAGGGTAAACCTGTGTGTTTGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR CCA 90 bp | ACATCTAATGTGCATTTGAGAAAGGCTGTGTGGTCCTTGAAGAATCCCAGTTTGGAGAAGGCTCCATCCTaGATCTCTGAGAAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSNVHLRKAVWSLKNPSLEKAPS*ISEKAA Trigger: TGCTGCCTTCTCAGAGATCCAGGATGGAGCCTTCTC...CAAACTGGGATTCTTCAAGGACCACACAGCCTTTCTCAAATGCACATTAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| 3UTR CAA 72 bp | CCCAGTTTGGAAGGCTCTCAGTTAGTTACATCTAACTaGACTTCACCTTCACGAAGCCCTCAAACCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLEGSQLVTSN*TSPSRSPQTQV Trigger: GACTTGGGTTTGAGGGCTTCGTGAAGGTGAAGTCAAGTTAGATGTAACTAACTGAGAGCCTTCCAAACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| 3UTR CAA 72 bp | ATACTGCACTGTGAAGAACCCAGTTGCTGCTGCCTCTaGTTATTATTGCTTCTGGATGAAGTGGCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILHCEEPSCCCL*LLLLLDEVALS Trigger: GGACAAAGCCACTTCATCCAGAAGCAATAATAACAAGAGGCAGCAGCAACTGGGTTCTTCACAGTGCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| 3UTR CAA 72 bp | TTGAGAAAGGCTGTGTGGTCCTTGAAGAATCCCAGTTaGGAAGGCTCTCAGTTAGTTACATCTAACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LRKAVWSLKNPS*EGSQLVTSNLT Trigger: AGTCAAGTTAGATGTAACTAACTGAGAGCCTTCCAAACTGGGATTCTTCAAGGACCACACAGCCTTTCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| 3UTR CAA 72 bp | ACATCTAATGTGCATTTGAGAAAGGCTGTGTGGTCCTaGAAGAATCCCAGTTTGGAAGGCTCTCAGTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSNVHLRKAVWS*KNPSLEGSQLV Trigger: AACTAACTGAGAGCCTTCCAAACTGGGATTCTTCAAGGACCACACAGCCTTTCTCAAATGCACATTAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| 3UTR CAA 72 bp | AAACACACAGGTTTACCCTACACATCTAATGTGCATTaGAGAAAGGCTGTGTGGTCCTTGAAGAATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KHTGLPYTSNVH*RKAVWSLKNPS Trigger: ACTGGGATTCTTCAAGGACCACACAGCCTTTCTCAAATGCACATTAGATGTGTAGGGTAAACCTGTGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS CCA 90 bp | CCTGCACCTTGTGTTCCTGGAAGCGGGGCGGGCTGGCGCAGTAGATaGGAGCCACCGTGGTGTTGGTGTGTGCCAGCCACTCCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPCVPGSGAGWRSR*EPPWCWCVPATPPA Trigger: GGCTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCTCCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAACACAAGGTGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGAGGCCTGGTTCCCAGGTGTCCCTCCCTGCCATCCTCATCCAGCCTCCTCCAGGTCATTGGGTTaGCGCACGCGCTGTGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AAEAWFPGVPPCHPHPASSRSLG*RTRCGS Trigger: CGACCCACAGCGCGTGCGCAAACCCAATGACCTGGA...GGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGGGAACCAGGCCTCTGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS CCA 90 bp | GTTCCTGGAAGCGGGGCGGGCTGGCGCAGTAGATGGGAGCCACCGTaGTGTTGGTGTGTGCCAGCCACTCCACCAGCCACTTTACCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPGSGAGWRSRWEPP*CWCVPATPPATLPC Trigger: GCAAGGTAAAGTGGCTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCTCCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS CCA 90 bp | GAAGAGGCAAGTCCTGCACCTTGTGTTCCTGGAAGCGGGGCGGGCTaGCGCAGTAGATGGGAGCCACCGTGGTGTTGGTGTGTGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EEASPAPCVPGSGAG*RSRWEPPWCWCVPA Trigger: GGCTGGCACACACCAACACCACGGTGGCTCCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAACACAAGGTGCAGGACTTGCCTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS GCA 90 bp | ACCAGGAAGGGCTGTAGGGCCAGCGAGCCTCGGGAGGGAAGGGCTTaGACCTCAGAGAAACGGGTACCTTCCCAGCGCAGGATCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TRKGCRASEPREGRA*TSEKRVPSQRRILE Trigger: CTCCAAGATCCTGCGCTGGGAAGGTACCCGTTTCTCTGAGGTGCAAGCCCTTCCCTCCCGAGGCTCGCTGGCCCTACAGCCCTTCCTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CAA 90 bp | AATGGGAATGGCTCCCCTGGGCTAGTCCCTGGTGTGTGCCCAGGCCCACTTCTTGGCAAGTCCTGCACCTaGTGTTCCTGGAAGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NGNGSPGLVPGVCPGPLLGKSCT*CSWKRG Trigger: GCCCCGCTTCCAGGAACACAAGGTGCAGGACTTGCC...AAGAAGTGGGCCTGGGCACACACCAGGGACTAGCCCAGGGGAGCCATTCCCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGTGTCCCTCCCTGCCATCCTCATCCAGCCTCCACCGAGCTGTGCCTCCGGACAATTAACCGTGGTTaGCCCTCACCGTCCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGVPPCHPHPASTELCLRTINRG*PSPSTN Trigger: GTTTGTGGACGGTGAGGGCAAACCACGGTTAATTGT...CCGGAGGCACAGCTCGGTGGAGGCTGGATGAGGATGGCAGGGAGGGACACCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CAA 90 bp | CAACATGTTCCTGGCGCCCACACAAGTAGCTCAGGCTGTCTCAGGATTCTTGCCCTGGTGGCACCTGCCTaGGAGCTGTCAGCCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QHVPGAHTSSSGCLRILALVAPA*ELSATA Trigger: CGCAGTGGCTGACAGCTCCAAGGCAGGTGCCACCAG...GGCAAGAATCCTGAGACAGCCTGAGCTACTTGTGTGGGCGCCAGGAACATGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS GCA 90 bp | CCAACGGTAGAGGCTGGTGGCACCTGCCTTGGAGCTGTCAGCCACTaGGAAAAACCAGTCACCGTCGATGCGGAAGGCTTCCAGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: PTVEAGGTCLGAVSH*EKPVTVDAEGFQVI Trigger: AATGACCTGGAAGCCTTCCGCATCGACGGTGACTGGTTTTTCGCAGTGGCTGACAGCTCCAAGGCAGGTGCCACCAGCCTCTACCGTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS GCA 90 bp | GGCATCTCCAGCAGGCATGTAGCAGAAGGCCCGGGGTGCCTGTACTaGCAGCTCTTGGAACCGTACAAATTTCTGTCGCCCCTCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GISSRHVAEGPGCLY*QLLEPYKFLSPLIP Trigger: TGGGATGAGGGGCGACAGAAATTTGTACGGTTCCAAGAGCTGGCAGTACAGGCACCCCGGGCCTTCTGCTACATGCCTGCTGGAGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS CCA 90 bp | GTCGATGCGGAAGGCTTCCAGGTCATTGGGTTTGCGCACGCGCTGTaGGTCGATGTCCTGCAACTTGGTGAAACGTGTGGTGTTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VDAEGFQVIGFAHAL*VDVLQLGETCGVGV Trigger: GACCCCAACACCACACGTTTCACCAAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTTCCGCATCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS CCA 90 bp | AGAAGCCATTCTGGTGCCAACGGTAGAGGCTGGTGGCACCTGCCTTaGAGCTGTCAGCCACTGCGAAAAACCAGTCACCGTCGATGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSHSGANGRGWWHLP*SCQPLRKTSHRRCG Trigger: TCCGCATCGACGGTGACTGGTTTTTCGCAGTGGCTGACAGCTCCAAGGCAGGTGCCACCAGCCTCTACCGTTGGCACCAGAATGGCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CAA 90 bp | CCACAAGTTGCTCACAGAGGTCCCCACCCATCGTACAGTGCCACCCTGAGGAACACCAGTGTTTGTCCCTaGAAACTGGGGGCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQVAHRGPHPSYSATLRNTSVCP*KLGARS Trigger: GCTCCTGGCCCCCAGTTTCAAGGGACAAACACTGGT...GTTCCTCAGGGTGGCACTGTACGATGGGTGGGGACCTCTGTGAGCAACTTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTCAAACCCAAGTCCTCCCCGTCTCTGAGCACCCTAACCCTGACCCCACACGTCTTAGGAGGTCTCTaGGCACTGACTTGCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: ALKPKSSPSLSTLTLTPHVLGGL*ALTCSI Trigger: AATGCTGCAAGTCAGTGCCAAGAGACCTCCTAAGAC...GTGTGGGGTCAGGGTTAGGGTGCTCAGAGACGGGGAGGACTTGGGTTTGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR CAA 90 bp | CCTGACCCCACACCTCTCCCTCCAGGGGTATGCTCTCTGCGGGACTGGATTCAGGTCTGCAGGTTATTGTaGGCCAGAGAAAGGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PDPTPLPPGVCSLRDWIQVCRLL*ARERCV Trigger: GACACACCTTTCTCTGGCCAACAATAACCTGCAGAC...CTGAATCCAGTCCCGCAGAGAGCATACCCCTGGAGGGAGAGGTGTGGGGTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCTGCTCCCAGAGGACAGCATCCACCACCATCGGCTaGCAGTGCACAGCTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQPDHFLLQGCCSQRTASTTIG*QCTAEG Trigger: CCCTTCAGCTGTGCACTGCAAGCCGATGGTGGTGGA...TGCTGTCCTCTGGGAGCAGCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS GCA 90 bp | GCTGGGCCACAACGACATAGAGCTGGCCATCCACCACCATCGGCTTaGAGTGCACAGCTGAAGGGGCTGGAATTCTGTCATAGTCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGPQRHRAGHPPPSA*SAQLKGLEFCHSLE Trigger: TTCGAGACTATGACAGAATTCCAGCCCCTTCAGCTGTGCACTGCAAGCCGATGGTGGTGGATGGCCAGCTCTATGTCGTTGTGGCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS GCA 90 bp | GGAATAGAAGCCATTCTGGTGCCAACGGTAGAGGCTGGTGGCACCTaGCTTGGAGCTGTCAGCCACTGCGAAAAACCAGTCACCGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GIEAILVPTVEAGGT*LGAVSHCEKPVTVD Trigger: ATCGACGGTGACTGGTTTTTCGCAGTGGCTGACAGCTCCAAGGCAGGTGCCACCAGCCTCTACCGTTGGCACCAGAATGGCTTCTATTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS CCA 90 bp | TCGTTCCACATAGTCCCACTTGAGGATGGTGCAGGCGCTGGCACCTaGCTGGGCCAGAGCCAAGTAGAGGTCACTAGAGTAAAGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFHIVPLEDGAGAGT*LGQSQVEVTRVKER Trigger: CCTTTCCTTTACTCTAGTGACCTCTACTTGGCTCTGGCCCAGCCAGGTGCCAGCGCCTGCACCATCCTCAAGTGGGACTATGTGGAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAGAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGATCGGGAGGGAAGGGCTaGCACCTCAGAGAAACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRREGCGSPLPALALLLRSGGKG*HLRETG Trigger: ACCCGTTTCTCTGAGGTGCAAGCCCTTCCCTCCCGA...TCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS TCA 90 bp | CATTGGGTTTGCGCACGCGCTGTGGGTCGATGTCCTGCAACTTGGTaGAACGTGTGGTGTTGGGGTCCCAGTGGTAAATGTATGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HWVCARAVGRCPATW*NVWCWGPSGKCMSH Trigger: GTGGCTCATACATTTACCACTGGGACCCCAACACCACACGTTTCACCAAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
||
| CDS-3UTR CAA 90 bp | AAGCACCTCGGGCATCCAGAGGCCAGAGAGCAGAAAGCTAAGCTGAGAAGAGAAAAGGCTTCCAGGTCATaGGGTTTGCGCACGCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KHLGHPEAREQKAKLRREKASRS*GLRTRC Trigger: ACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTT...TTCTCTTCTCAGCTTAGCTTTCTGCTCTCTGGCCTCTGGATGCCCGAGGTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS-3UTR CAA 90 bp | GAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGACACGCTATCGGTACACCAGTGTTaGTCCCTTGAAACTGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: EKAVAHPFLHSLCYSDTLSVHQC*SLETGG Trigger: GCCCCCAGTTTCAAGGGACAAACACTGGTGTACCGA...TAGCGTGTCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 90 bp | AGTAACAAGAACTGCAACAACGGCAGATGGGAGAAGGCTCCATCCTaGATCTCTGAGAAGGCAGCATTCACCAGCGTCAGGGAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: SNKNCNNGRWEKAPS*ISEKAAFTSVREMT Trigger: GGTCATCTCCCTGACGCTGGTGAATGCTGCCTTCTCAGAGATCCAGGATGGAGCCTTCTCCCATCTGCCGTTGTTGCAGTTCTTGTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCTGCTCCCAGAGGACAGCAACCAGCCACTTTACCTaGCAGTCACAGTTAAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: SSQPDHFLLQGCCSQRTATSHFT*QSQLSA Trigger: CGCACTTAACTGTGACTGCAAGGTAAAGTGGCTGGT...TGCTGTCCTCTGGGAGCAGCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 90 bp | TCACTCAGGATGTCCAGGGGACGGAAGATGTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGAGAAAGGTGTGTCAAGGACTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLRMSRGRKMSLGSV*RLLLARERCVKDFS Trigger: ACTGAAGTCCTTGACACACCTTTCTCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGTCCCCTGGACATCCTGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS-3UTR CAA 90 bp | CTGAGAAGAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGAGTCTTAGGAGGTCTCTaGGCACTGACTTGCAGCATT | + |
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Preference number: 5 (lower is better) Translates to: LRREGCGSPLPALALLLRVLGGL*ALTCSI Trigger: AATGCTGCAAGTCAGTGCCAAGAGACCTCCTAAGAC...TCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTCTTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS-3UTR CAA 90 bp | GCATCAGGCCGCAAGAAATCCTCTCAGCCTGATCATTTCCTACTTCAGGGCTGCGTCTGCAGGTTATTGTaGGCCAGAGAAAGGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASGRKKSSQPDHFLLQGCVCRLL*ARERCV Trigger: GACACACCTTTCTCTGGCCAACAATAACCTGCAGAC...GCAGCCCTGAAGTAGGAAATGATCAGGCTGAGAGGATTTCTTGCGGCCTGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS-3UTR CAA 90 bp | GAGAAGGCTGTGGCTCACCCCTTCCTGCACTCGCTTTGTTACTCAGACACGCTAAGTCCTATGAAGGCATaGTCTCCAATCAGTGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: EKAVAHPFLHSLCYSDTLSPMKA*SPISVN Trigger: GTTCACACTGATTGGAGACAATGCCTTCATAGGACT...TAGCGTGTCTGAGTAACAAAGCGAGTGCAGGAAGGGGTGAGCCACAGCCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS-3UTR CAA 90 bp | GTACACAAGCACCTCGGGCATCCAGAGGCCAGAGAGCAGAAAGCTAAGCTGAGAAGAGCCCAGATGTCATaGTTCTCTATGAAGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VHKHLGHPEAREQKAKLRRAQMS*FSMKRY Trigger: GTACCTCTTCATAGAGAACAATGACATCTGGGCTCT...TCTCAGCTTAGCTTTCTGCTCTCTGGCCTCTGGATGCCCGAGGTGCTTGTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS-3UTR CAA 90 bp | GCACATAGAGAGCCTGGACACTGGGTGCCTGGTGCATACGTAGGTGCTTATTACAGTGTCTGCAGGTTATaGTTGGCCAGAGAAAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: AHREPGHWVPGAYVGAYYSVCRL*LARERC Trigger: ACACCTTTCTCTGGCCAACAATAACCTGCAGACACT...GTAATAAGCACCTACGTATGCACCAGGCACCCAGTGTCCAGGCTCTCTATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 90 bp | GTGAACTTGTTAGAGTTGAGTAACAAGAACTGCAACAACGGCAGATaGGAGAAGGCTCCATCCTGGATCTCTGAGAAGGCAGCATTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VNLLELSNKNCNNGR*EKAPSWISEKAAFT Trigger: GGTGAATGCTGCCTTCTCAGAGATCCAGGATGGAGCCTTCTCCCATCTGCCGTTGTTGCAGTTCTTGTTACTCAACTCTAACAAGTTCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS-3UTR CAA 90 bp | CGTGTGCAGATACAGAATCAGAAGTGTGGTGGGGTATGCACAAGTATGCAGCTGCTGTACTGCCAGCTCTaGGAACCGTACAAATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RVQIQNQKCGGVCTSMQLLYCQL*EPYKFL Trigger: CAGAAATTTGTACGGTTCCAAGAGCTGGCAGTACAG...CAGCTGCATACTTGTGCATACCCCACCACACTTCTGATTCTGTATCTGCACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS-3UTR CAA 90 bp | GAGAAAGGCTGTGTGGTCCTTGAAGAATCCCAGTTTGGAAGGCTCTCAGTTAGTAGTGTCTGCAGGTTATaGTTGGCCAGAGAAAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EKGCVVLEESQFGRLSVSSVCRL*LARERC Trigger: ACACCTTTCTCTGGCCAACAATAACCTGCAGACACT...ACTAACTGAGAGCCTTCCAAACTGGGATTCTTCAAGGACCACACAGCCTTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| CDS-3UTR CAA 90 bp | GGTTTACCCTACACATCTAATGTGCATTTGAGAAAGGCTGTGTGGTCCTTGAAGAGTCCTATGAAGGCATaGTCTCCAATCAGTGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLPYTSNVHLRKAVWSLKSPMKA*SPISVN Trigger: GTTCACACTGATTGGAGACAATGCCTTCATAGGACT...CTTCAAGGACCACACAGCCTTTCTCAAATGCACATTAGATGTGTAGGGTAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226548.2 |
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| CDS GCA 72 bp | TTAGGCAAAAACCCAGCGTGGACAACACCAGTAGCCTaGGCCCAGGGCCCCGCCTGGCTCGTAGCCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGKNPAWTTPVA*AQGPAWLVARP Trigger: TGGCCGGGCTACGAGCCAGGCGGGGCCCTGGGCGCAGGCTACTGGTGTTGTCCACGCTGGGTTTTTGCCTAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS CCA 72 bp | TGTGTTCCTGGAAGCGGGGCGGGCTGGCGCAGTAGATaGGAGCCACCGTGGTGTTGGTGTGTGCCAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: CVPGSGAGWRSR*EPPWCWCVPAT Trigger: AGTGGCTGGCACACACCAACACCACGGTGGCTCCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAACACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 72 bp | GCGGGCTGGCGCAGTAGATGGGAGCCACCGTGGTGTTaGTGTGTGCCAGCCACTCCACCAGCCACTTTACCT | + |
|
Preference number: 6 (lower is better) Translates to: AGWRSRWEPPWC*CVPATPPATLP Trigger: AGGTAAAGTGGCTGGTGGAGTGGCTGGCACACACCAACACCACGGTGGCTCCCATCTACTGCGCCAGCCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 72 bp | AGTCCTGCACCTTGTGTTCCTGGAAGCGGGGCGGGCTaGCGCAGTAGATGGGAGCCACCGTGGTGTTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPAPCVPGSGAG*RSRWEPPWCWC Trigger: ACACCAACACCACGGTGGCTCCCATCTACTGCGCCAGCCCGCCCCGCTTCCAGGAACACAAGGTGCAGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 72 bp | GTGGTGATGCAGTCGAATTCTCGAAGAGGCAAGTCCTaGACCTTGTGTTCCTGGAAGCGGGGCGGGCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VVMQSNSRRGKS*TLCSWKRGGLA Trigger: CGCCAGCCCGCCCCGCTTCCAGGAACACAAGGTGCAGGACTTGCCTCTTCGAGAATTCGACTGCATCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 72 bp | CACCGTCGATGCGGAAGGCTTCCAGGTCATTGGGTTTaGGCACGCGCTGTGGGTCGATGTCCTGCAACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HRRCGRLPGHWV*ARAVGRCPATW Trigger: CCAAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTTCCGCATCGACGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 72 bp | GAGGCTGGTGGCACCTGCCTTGGAGCTGTCAGCCACTaGGAAAAACCAGTCACCGTCGATGCGGAAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EAGGTCLGAVSH*EKPVTVDAEGF Trigger: GAAGCCTTCCGCATCGACGGTGACTGGTTTTTCGCAGTGGCTGACAGCTCCAAGGCAGGTGCCACCAGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 72 bp | ACCAGTCACCGTCGATGCGGAAGGCTTCCAGGTCATTaGGTTTGCGCACGCGCTGTGGGTCGATGTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSHRRCGRLPGH*VCARAVGRCPA Trigger: TGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTTCCGCATCGACGGTGACTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 72 bp | AACCAGTCACCGTCGATGCGGAAGGCTTCCAGGTCATaGGGTTTGCGCACGCGCTGTGGGTCGATGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NQSPSMRKASRS*GLRTRCGSMSC Trigger: GCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTTCCGCATCGACGGTGACTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 72 bp | TCTGGTGCCAACGGTAGAGGCTGGTGGCACCTGCCTTaGAGCTGTCAGCCACTGCGAAAAACCAGTCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: SGANGRGWWHLP*SCQPLRKTSHR Trigger: ACGGTGACTGGTTTTTCGCAGTGGCTGACAGCTCCAAGGCAGGTGCCACCAGCCTCTACCGTTGGCACCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 72 bp | TCACCGTCGATGCGGAAGGCTTCCAGGTCATTGGGTTaGCGCACGCGCTGTGGGTCGATGTCCTGCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPSMRKASRSLG*RTRCGSMSCNL Trigger: CAAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTTCCGCATCGACGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 90 bp | ACTGCGAAAAACCAGTCACCGTCGATGCGGAAGGCTTCCAGGTCATaGGGTTTGCGCACGCGCTGTGGGTCGATGTCCTGCAACTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TAKNQSPSMRKASRS*GLRTRCGSMSCNLV Trigger: CACCAAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTTCCGCATCGACGGTGACTGGTTTTTCGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 72 bp | TCATTGGGTTTGCGCACGCGCTGTGGGTCGATGTCCTaGAACTTGGTGAAACGTGTGGTGTTGGGGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLGLRTRCGSMS*NLVKRVVLGSQ Trigger: CTGGGACCCCAACACCACACGTTTCACCAAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 72 bp | AGCAGGCATGTAGCAGAAGGCCCGGGGTGCCTGTACTaGCAGCTCTTGGAACCGTACAAATTTCTGTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SRHVAEGPGCLY*QLLEPYKFLSP Trigger: GGGCGACAGAAATTTGTACGGTTCCAAGAGCTGGCAGTACAGGCACCCCGGGCCTTCTGCTACATGCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 72 bp | ATAGTCCCACTTGAGGATGGTGCAGGCGCTGGCACCTaGCTGGGCCAGAGCCAAGTAGAGGTCACTAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: IVPLEDGAGAGT*LGQSQVEVTRV Trigger: TACTCTAGTGACCTCTACTTGGCTCTGGCCCAGCCAGGTGCCAGCGCCTGCACCATCCTCAAGTGGGACTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 90 bp | ACCGTGGTGTTGGTGTGTGCCAGCCACTCCACCAGCCACTTTACCTaGCAGTCACAGTTAAGTGCGTTGCCCCGGAGGTCTAAGTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: TVVLVCASHSTSHFT*QSQLSALPRRSKSL Trigger: GAGTGACTTAGACCTCCGGGGCAACGCACTTAACTGTGACTGCAAGGTAAAGTGGCTGGTGGAGTGGCTGGCACACACCAACACCACGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 90 bp | AGCAGGCATGTAGCAGAAGGCCCGGGGTGCCTGTACTGCCAGCTCTaGGAACCGTACAAATTTCTGTCGCCCCTCATCCCACTGGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRHVAEGPGCLYCQL*EPYKFLSPLIPLVD Trigger: ATCTACCAGTGGGATGAGGGGCGACAGAAATTTGTACGGTTCCAAGAGCTGGCAGTACAGGCACCCCGGGCCTTCTGCTACATGCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS TCA 72 bp | GAAGGCAGCATTCACCAGCGTCAGGGAGATGACCTCTaGAGGCAGGTTCTTGGGCACCGACTTAGAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: EGSIHQRQGDDL*RQVLGHRLRVH Trigger: GTGGACTCTAAGTCGGTGCCCAAGAACCTGCCTTCAGAGGTCATCTCCCTGACGCTGGTGAATGCTGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS TCA 72 bp | TGCGCACGCGCTGTGGGTCGATGTCCTGCAACTTGGTaGAACGTGTGGTGTTGGGGTCCCAGTGGTAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: CARAVGRCPATW*NVWCWGPSGKC Trigger: ACATTTACCACTGGGACCCCAACACCACACGTTTCACCAAGTTGCAGGACATCGACCCACAGCGCGTGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 72 bp | GGCATCTCCAGCAGGCATGTAGCAGAAGGCCCGGGGTaGCTGTACTGCCAGCTCTTGGAACCGTACAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: GISSRHVAEGPG*LYCQLLEPYKF Trigger: AAATTTGTACGGTTCCAAGAGCTGGCAGTACAGGCACCCCGGGCCTTCTGCTACATGCCTGCTGGAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 72 bp | GAAGGCTTCCAGGTCATTGGGTTTGCGCACGCGCTGTaGGTCGATGTCCTGCAACTTGGTGAAACGTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: EGFQVIGFAHAL*VDVLQLGETCG Trigger: ACCACACGTTTCACCAAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 72 bp | TTGGTGTGTGCCAGCCACTCCACCAGCCACTTTACCTaGCAGTCACAGTTAAGTGCGTTGCCCCGGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVCASHSTSHFT*QSQLSALPRRS Trigger: AGACCTCCGGGGCAACGCACTTAACTGTGACTGCAAGGTAAAGTGGCTGGTGGAGTGGCTGGCACACACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 72 bp | TCCACCACAACATGTCGGTACACCAGTGTTTGTCCCTaGAAACTGGGGGCCAGGAGCAGCTGGGCATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: STTTCRYTSVCP*KLGARSSWASP Trigger: TGGAGATGCCCAGCTGCTCCTGGCCCCCAGTTTCAAGGGACAAACACTGGTGTACCGACATGTTGTGGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 72 bp | ACTAAGGTCCACCACAACATGTCGGTACACCAGTGTTaGTCCCTTGAAACTGGGGGCCAGGAGCAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TKVHHNMSVHQC*SLETGGQEQLG Trigger: GCCCAGCTGCTCCTGGCCCCCAGTTTCAAGGGACAAACACTGGTGTACCGACATGTTGTGGTGGACCTTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CAA 90 bp | AAAAACCAGTCACCGTCGATGCGGAAGGCTTCCAGGTCATTGGGTTaGCGCACGCGCTGTGGGTCGATGTCCTGCAACTTGGTGAAACGT | + |
|
Preference number: 6 (lower is better) Translates to: KNQSPSMRKASRSLG*RTRCGSMSCNLVKR Trigger: ACGTTTCACCAAGTTGCAGGACATCGACCCACAGCGCGTGCGCAAACCCAATGACCTGGAAGCCTTCCGCATCGACGGTGACTGGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 72 bp | CAACGACATAGAGCTGGCCATCCACCACCATCGGCTTaGAGTGCACAGCTGAAGGGGCTGGAATTCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QRHRAGHPPPSA*SAQLKGLEFCH Trigger: ATGACAGAATTCCAGCCCCTTCAGCTGTGCACTGCAAGCCGATGGTGGTGGATGGCCAGCTCTATGTCGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 72 bp | AACTGCAACAACGGCAGATGGGAGAAGGCTCCATCCTaGATCTCTGAGAAGGCAGCATTCACCAGCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NCNNGRWEKAPS*ISEKAAFTSVR Trigger: CCTGACGCTGGTGAATGCTGCCTTCTCAGAGATCCAGGATGGAGCCTTCTCCCATCTGCCGTTGTTGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS CAA 72 bp | ACCAGCCACTTTACCTTGCAGTCACAGTTAAGTGCGTaGCCCCGGAGGTCTAAGTCACTCAGGATGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSHFTLQSQLSA*PRRSKSLRMSR Trigger: CCTGGACATCCTGAGTGACTTAGACCTCCGGGGCAACGCACTTAACTGTGACTGCAAGGTAAAGTGGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS GCA 72 bp | ATGTCCAGGGGACGGAAGATGTCTCTGGGCAGTGTCTaGAGGTTATTGTTGGCCAGAGAAAGGTGTGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: MSRGRKMSLGSV*RLLLARERCVK Trigger: CTTGACACACCTTTCTCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGTCCCCTGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS CCA 72 bp | GGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTTaGCCAGAGAAAGGTGTGTCAAGGACTTCAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRCLWAVSAGYC*PEKGVSRTSVL Trigger: GAGGACTGAAGTCCTTGACACACCTTTCTCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS CAA 72 bp | CGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATTGTaGGCCAGAGAAAGGTGTGTCAAGGACTTCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RKMSLGSVCRLL*ARERCVKDFSP Trigger: AGGACTGAAGTCCTTGACACACCTTTCTCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS CAA 72 bp | GGACGGAAGATGTCTCTGGGCAGTGTCTGCAGGTTATaGTTGGCCAGAGAAAGGTGTGTCAAGGACTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRKMSLGSVCRL*LARERCVKDFS Trigger: ACTGAAGTCCTTGACACACCTTTCTCTGGCCAACAATAACCTGCAGACACTGCCCAGAGACATCTTCCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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| CDS CAA 72 bp | TCCCTGAGCCACAAACTGTTTCTGAGAACGACTCCATaGATAGATGACAGGTGCTTGCGAGCTGCTAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSHKLFLRTTP*IDDRCLRAARH Trigger: GTGTCTAGCAGCTCGCAAGCACCTGTCATCTATCAATGGAGTCGTTCTCAGAAACAGTTTGTGGCTCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047331.8 |
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| CDS CCA 72 bp | TTAGAGTTGAGTAACAAGAACTGCAACAACGGCAGATaGGAGAAGGCTCCATCCTGGATCTCTGAGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LELSNKNCNNGR*EKAPSWISEKA Trigger: TGCCTTCTCAGAGATCCAGGATGGAGCCTTCTCCCATCTGCCGTTGTTGCAGTTCTTGTTACTCAACTCTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047331.8 ENSMUST00000226548.2 |
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