Pregenerated sensors for LGI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067242Ensembl transcript IDs: ENSMUST00000087252.12, ENSMUST00000196090.2, ENSMUST00000197123.2, ENSMUST00000198045.5, ENSMUST00000198518.5, ENSMUST00000199812.5
Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTGGTTGATGATGGCTGTTGGCTGCAACACCAGCTGGGCCTGTTaGCCAGAGCACCAGGAGGTGGTTGCTCCCGAGGGGATTGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: WWLMMAVGCNTSWAC*PEHQEVVAPEGIGF Trigger: AAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGGTGTTGCAGCCAACAGCCATCATCAACCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR TCA 90 bp | GTTATCAGGGCGGCCACCCTGGCATGCCACACCTCATCATGCGTCTaGCACAGTCCCTCCCTCCCTGACTTTCTTTCCTTTGTGTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: VIRAATLACHTSSCV*HSPSLPDFLSFVSS Trigger: GGAGGACACAAAGGAAAGAAAGTCAGGGAGGGAGGGACTGTGTCAGACGCATGATGAGGTGTGGCATGCCAGGGTGGCCGCCCTGATAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR GCA 90 bp | CTGCAACACCAGCTGGGCCTGTTGACCAGAGCACCAGGAGGTGGTTaGTCCCGAGGGGATTGGTTTTCAACAAAGAAGAATGGCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LQHQLGLLTRAPGGG*SRGDWFSTKKNGLW Trigger: CCAGAGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGGTGTTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | TCTGGAGCTGTAGGCTTTACAGGACTGGTGGTTGATGATGGCTGTTaGCTGCAACACCAGCTGGGCCTGTTGACCAGAGCACCAGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: SGAVGFTGLVVDDGC*LQHQLGLLTRAPGG Trigger: ACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGGTGTTGCAGCCAACAGCCATCATCAACCACCAGTCCTGTAAAGCCTACAGCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | GGTTGGAACACCATGGATCCTCGAGATGGCATCCTCTGGATGTCCTaGAAGGAGGAGCCGCCCCACTTCATGACTTTAGAGTCGCCAATG | + |
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Preference number: 1 (lower is better) Translates to: GWNTMDPRDGILWMS*KEEPPHFMTLESPM Trigger: CATTGGCGACTCTAAAGTCATGAAGTGGGGCGGCTCCTCCTTCCAGGACATCCAGAGGATGCCATCTCGAGGATCCATGGTGTTCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR CCA 90 bp | TTGGCTGCAACACCAGCTGGGCCTGTTGACCAGAGCACCAGGAGGTaGTTGCTCCCGAGGGGATTGGTTTTCAACAAAGAAGAATGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LAATPAGPVDQSTRR*LLPRGLVFNKEEWP Trigger: AGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGGTGTTGCAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR GCA 90 bp | TGCTCCAGGCAACCAGACTTATCCTGGGCAGAGGGTACTGCTGTCTaGCTACCTCCATCCAGTGGGAACATAGCAAGCTCAAAAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: CSRQPDLSWAEGTAV*LPPSSGNIASSKAL Trigger: GAGAGCTTTTGAGCTTGCTATGTTCCCACTGGATGGAGGTAGGCAGACAGCAGTACCCTCTGCCCAGGATAAGTCTGGTTGCCTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | AGAAAGCACAACCAGATCTCTTGGGATGTGGGGCAGAAAACAACATaGACTAGGCAGCTGCTCTCCTCCTCCTCCTCCTTCTCCTCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: RKHNQISWDVGQKTT*TRQLLSSSSSFSSS Trigger: GGAGGAGGAGAAGGAGGAGGAGGAGGAGAGCAGCTGCCTAGTCCATGTTGTTTTCTGCCCCACATCCCAAGAGATCTGGTTGTGCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR TCA 90 bp | GTGATACTCTTCACTCTTGGGCTAGTGTGGCATAATTCACACTCTTaGGTCCCCATGGGACGAGTCCCCACTGGGATGAGGCTGAGACCA | + |
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Preference number: 1 (lower is better) Translates to: VILFTLGLVWHNSHS*VPMGRVPTGMRLRP Trigger: TGGTCTCAGCCTCATCCCAGTGGGGACTCGTCCCATGGGGACTCAAGAGTGTGAATTATGCCACACTAGCCCAAGAGTGAAGAGTATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | ACGTCTCTGCTCTTGGTGCTGAGGGGCACAATGGGAGTTCTTATGTaGGAGTCGGCAGAGTTAATCATGTTGTGTGTGGTTCCACGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: TSLLLVLRGTMGVLM*ESAELIMLCVVPRC Trigger: GCACCGTGGAACCACACACAACATGATTAACTCTGCCGACTCCCACATAAGAACTCCCATTGTGCCCCTCAGCACCAAGAGCAGAGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR TCA 90 bp | TCCTCCTCCTCCTCCTTTCTCTTCCTTCTCCCTCTCTCTCCCCTCTaGGGTGGACACAATGAACTGCCAAGATGCCCATTCAGGAATACA | + |
|
Preference number: 1 (lower is better) Translates to: SSSSSFLFLLPLSPL*GGHNELPRCPFRNT Trigger: TGTATTCCTGAATGGGCATCTTGGCAGTTCATTGTGTCCACCTCAGAGGGGAGAGAGAGGGAGAAGGAAGAGAAAGGAGGAGGAGGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | GAGCTGGTTCCTACTTGCCTTCCTAGGTGCCTTAGTCTTACAGTATaGACCTGTTCTCCTCATTCTCTCCCCAGAGGGAAGCTCCTGGTA | + |
|
Preference number: 1 (lower is better) Translates to: ELVPTCLPRCLSLTV*TCSPHSLPRGKLLV Trigger: TACCAGGAGCTTCCCTCTGGGGAGAGAATGAGGAGAACAGGTCCATACTGTAAGACTAAGGCACCTAGGAAGGCAAGTAGGAACCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR TCA 90 bp | TCTTTGTGCGTGGTGACCCAGGGTGTTGCTTCTTTGGAGACTGTGTaGTTATTGTGGAGACCCCTGATGCTCCAGGCAACCAGACTTATC | + |
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Preference number: 1 (lower is better) Translates to: SLCVVTQGVASLETV*LLWRPLMLQATRLI Trigger: GATAAGTCTGGTTGCCTGGAGCATCAGGGGTCTCCACAATAATCACACAGTCTCCAAAGAAGCAACACCCTGGGTCACCACGCACAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | CAAAATGTCCTCTGCCAGATAGAGAGGCCTCCAGGGCCAGCATGTTaGGAGGCAAGTGCTCTCCATAATTTACAATCTACCAGCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: QNVLCQIERPPGPAC*EASALHNLQSTSCQ Trigger: CTGACAGCTGGTAGATTGTAAATTATGGAGAGCACTTGCCTCCCAACATGCTGGCCCTGGAGGCCTCTCTATCTGGCAGAGGACATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | GGCCTGTTGACCAGAGCACCAGGAGGTGGTTGCTCCCGAGGGGATTaGTTTTCAACAAAGAAGAATGGCCTCTGGTTAGAAAGACTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: GLLTRAPGGGCSRGD*FSTKKNGLWLERLL Trigger: AAGAAGTCTTTCTAACCAGAGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR GCA 90 bp | GTGTTTGCACCCTGGAGCACACTAAGCATTGAGCTGGTTCCTACTTaGCTTCCTAGGTGCCTTAGTCTTACAGTATGGACCTGTTCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: VFAPWSTLSIELVPT*LPRCLSLTVWTCSP Trigger: AGGAGAACAGGTCCATACTGTAAGACTAAGGCACCTAGGAAGGCAAGTAGGAACCAGCTCAATGCTTAGTGTGCTCCAGGGTGCAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | TATATTCCGGTGGGCCTTCACAGTAGATGTCTTCCACAGTTGCATTaGTATGGCCGAGCCATTCCACCAGCCACTTCAACTTACAGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: YIPVGLHSRCLPQLH*YGRAIPPATSTYSH Trigger: GTGACTGTAAGTTGAAGTGGCTGGTGGAATGGCTCGGCCATACCAATGCAACTGTGGAAGACATCTACTGTGAAGGCCCACCGGAATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR GCA 90 bp | TTCCCTCCTTCCCAGATGTCGACTTTGAGAATATTCTCCAACAAATaGTCCAGCAACCGTTTTACACAGTCTGGTTATCAGGGCGGCCAC | + |
|
Preference number: 1 (lower is better) Translates to: FPPSQMSTLRIFSNK*SSNRFTQSGYQGGH Trigger: GTGGCCGCCCTGATAACCAGACTGTGTAAAACGGTTGCTGGAGCATTTGTTGGAGAATATTCTCAAAGTCGACATCTGGGAAGGAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | CATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATaGCAGCCGTGGAGTTTGGTGTCTCATGCGCTTAAGTCAACTATG | + |
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Preference number: 1 (lower is better) Translates to: HALSSSRSRTVESFR*QPWSLVSHALKSTM Trigger: CATAGTTGACTTAAGCGCATGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR CCA 90 bp | GGTTGCTCCCGAGGGGATTGGTTTTCAACAAAGAAGAATGGCCTCTaGTTAGAAAGACTTCTTATGCAGATGTTCTGGGCTCTGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: GCSRGDWFSTKKNGL*LERLLMQMFWALQA Trigger: TGCCTGCAGAGCCCAGAACATCTGCATAAGAAGTCTTTCTAACCAGAGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR GCA 90 bp | TTTCTTATATTCCGGTGGGCCTTCACAGTAGATGTCTTCCACAGTTaGATTGGTATGGCCGAGCCATTCCACCAGCCACTTCAACTTACA | + |
|
Preference number: 1 (lower is better) Translates to: FLIFRWAFTVDVFHS*IGMAEPFHQPLQLT Trigger: TGTAAGTTGAAGTGGCTGGTGGAATGGCTCGGCCATACCAATGCAACTGTGGAAGACATCTACTGTGAAGGCCCACCGGAATATAAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR GCA 90 bp | CAAGCTCAAAAGCTCTCCATAGAGGCAGCACACATAACCAGTTTGTaGCCGCAATGTCTTCCCTACACACTTTCTTTTGCCTCTTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: QAQKLSIEAAHITSL*PQCLPYTLSFASSL Trigger: AAGGGAAGAGGCAAAAGAAAGTGTGTAGGGAAGACATTGCGGGCACAAACTGGTTATGTGTGCTGCCTCTATGGAGAGCTTTTGAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | ATCCTTGGGGGAGAGGCTATTGATTTTCCGTTTCTTATATTCCGGTaGGCCTTCACAGTAGATGTCTTCCACAGTTGCATTGGTATGGCC | + |
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Preference number: 1 (lower is better) Translates to: ILGGEAIDFPFLIFR*AFTVDVFHSCIGMA Trigger: GGCCATACCAATGCAACTGTGGAAGACATCTACTGTGAAGGCCCACCGGAATATAAGAAACGGAAAATCAATAGCCTCTCCCCCAAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR CCA 90 bp | AGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGCCGTaGAGTTTGGTGTCTCATGCGCTTAAGTCAACTATGACATGTTTG | + |
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Preference number: 1 (lower is better) Translates to: SSSRSRTVESFRWQP*SLVSHALKSTMTCL Trigger: CAAACATGTCATAGTTGACTTAAGCGCATGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR CCA 90 bp | AGGAGGTGGTTGCTCCCGAGGGGATTGGTTTTCAACAAAGAAGAATaGCCTCTGGTTAGAAAGACTTCTTATGCAGATGTTCTGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: RRWLLPRGLVFNKEE*PLVRKTSYADVLGS Trigger: AGAGCCCAGAACATCTGCATAAGAAGTCTTTCTAACCAGAGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR GCA 90 bp | ATGAATCTGGTCAAGCAGATGTACACATCACCTTTCACAGAGAAGTaGTTCACCGCGTATACGTCCTCCATGTTAGGAATGTCGGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: MNLVKQMYTSPFTEK*FTAYTSSMLGMSVW Trigger: CCAAACCGACATTCCTAACATGGAGGACGTATACGCGGTGAAGCACTTCTCTGTGAAAGGTGATGTGTACATCTGCTTGACCAGATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR CCA 90 bp | TATCGGATTTTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAAGAGCAGTTGGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: YRIFVTDGCEPPCGC*DLNSGPSEEQLVLL Trigger: TAAGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAAAATCCGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR TCA 90 bp | GACATATCTATAAAAGTGAGTTCTCTTGCTCCAACTTGGGACAACTaGAAAGAGACATTTCAACTCCAGAGCTCGCGAGCTCTGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: DISIKVSSLAPTWDN*KETFQLQSSRALEL Trigger: CAGCTCCAGAGCTCGCGAGCTCTGGAGTTGAAATGTCTCTTTTCAGTTGTCCCAAGTTGGAGCAAGAGAACTCACTTTTATAGATATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR GCA 90 bp | ATCTTACTCTTCTTTCATTATGCTGTACCATCCTCCTTCAGTGGATaGTCCTGTACATGGCAGAGGGGGAATCAAGCCAGTCTAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: ILLFFHYAVPSSFSG*SCTWQRGNQASLTS Trigger: AGAAGTTAGACTGGCTTGATTCCCCCTCTGCCATGTACAGGAGCATCCACTGAAGGAGGATGGTACAGCATAATGAAAGAAGAGTAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CCA 90 bp | GAATTGCATATTGGTAATTATTTATCTGAAGAGGTTGGAACACCATaGATCCTCGAGATGGCATCCTCTGGATGTCCTGGAAGGAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: ELHIGNYLSEEVGTP*ILEMASSGCPGRRS Trigger: GCTCCTCCTTCCAGGACATCCAGAGGATGCCATCTCGAGGATCCATGGTGTTCCAACCTCTTCAGATAAATAATTACCAATATGCAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR TCA 90 bp | ATGCGTTCCCTCTTAGGTCCACATTTGTTAAGGAATCCAGGCCTTTaGAAATGTCTTTTGGGAGTGTCTGGAGATTGTTGTTTGCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: MRSLLGPHLLRNPGL*KCLLGVSGDCCLQD Trigger: GTCTTGCAAACAACAATCTCCAGACACTCCCAAAAGACATTTTCAAAGGCCTGGATTCCTTAACAAATGTGGACCTAAGAGGGAACGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR GCA 90 bp | AAGATAGTTTATAAAAATGTAGAAATCTCTCAAAAAGTGTGTGTGTaGATGCAAGGTGTGGGTGTATGCAAGTGTGCTTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: KIVYKNVEISQKVCV*MQGVGVCKCACVCV Trigger: CACACACACACAAGCACACTTGCATACACCCACACCTTGCATGCACACACACACTTTTTGAGAGATTTCTACATTTTTATAAACTATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR GCA 90 bp | ATCCCAGTTATACACTTGAGTAAAGGAGTAATCGCTTCCGAGAATTaGATATTGGTAATTATTTATCTGAAGAGGTTGGAACACCATGGA | + |
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Preference number: 1 (lower is better) Translates to: IPVIHLSKGVIASEN*ILVIIYLKRLEHHG Trigger: TCCATGGTGTTCCAACCTCTTCAGATAAATAATTACCAATATGCAATTCTCGGAAGCGATTACTCCTTTACTCAAGTGTATAACTGGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR GCA 90 bp | AGCTGGTTTATTGAAGAAAGACAACACCTTTTTATACTCTATGTTTaGACAGCAGCTGAATCACAGGTAATGCTGAAAGCAGACTTAATG | + |
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Preference number: 1 (lower is better) Translates to: SWFIEERQHLFILYV*TAAESQVMLKADLM Trigger: CATTAAGTCTGCTTTCAGCATTACCTGTGATTCAGCTGCTGTGCAAACATAGAGTATAAAAAGGTGTTGTCTTTCTTCAATAAACCAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CAA 90 bp | CTGGTGGTTGATGATGGCTGTTGGCTGCAACACCAGCTGGGCCTGTaGACCAGAGCACCAGGAGGTGGTTGCTCCCGAGGGGATTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LVVDDGCWLQHQLGL*TRAPGGGCSRGDWF Trigger: AAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGGTGTTGCAGCCAACAGCCATCATCAACCACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CAA 90 bp | GCTGCAACACCAGCTGGGCCTGTTGACCAGAGCACCAGGAGGTGGTaGCTCCCGAGGGGATTGGTTTTCAACAAAGAAGAATGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: AATPAGPVDQSTRRW*LPRGLVFNKEEWPL Trigger: CAGAGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGGTGTTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CAA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTaGGTGCTCTTAACCACTGAGCCGTCTCTCCAGCCCGTGGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: PCGCWDLNSGPSEEQ*VLLTTEPSLQPVVH Trigger: GTGAACCACGGGCTGGAGAGACGGCTCAGTGGTTAAGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CAA 90 bp | GGGCCTGTTGACCAGAGCACCAGGAGGTGGTTGCTCCCGAGGGGATaGGTTTTCAACAAAGAAGAATGGCCTCTGGTTAGAAAGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: GPVDQSTRRWLLPRG*VFNKEEWPLVRKTS Trigger: AGAAGTCTTTCTAACCAGAGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR-3UTR GCA 90 bp | ATCGTTAACGTCTCTGCTCTTGGTGCTGAGGGGCACAATGGGAGTTCTTATGTGCCATGCCAGAGCCCATaGTTCCTTCCAGGAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: IVNVSALGAEGHNGSSYVPCQSP*FLPGTA Trigger: AGCTGTTCCTGGAAGGAAGCATGGGCTCTGGCATGG...CACATAAGAACTCCCATTGTGCCCCTCAGCACCAAGAGCAGAGACGTTAACGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CAA 90 bp | TCCTGGAGCCATCTTTCAGGTGATAAATCGTTAACGTCTCTGCTCTaGGTGCTGAGGGGCACAATGGGAGTTCTTATGTGGGAGTCGGCA | + |
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Preference number: 2 (lower is better) Translates to: SWSHLSGDKSLTSLL*VLRGTMGVLMWESA Trigger: TGCCGACTCCCACATAAGAACTCCCATTGTGCCCCTCAGCACCAAGAGCAGAGACGTTAACGATTTATCACCTGAAAGATGGCTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCTTAGTGAATTTTGGACAAGGTCTCACAGGCGTGGGGGTTCAAGGTGCCTTCCACAGTTGCATTaGTATGGCCGAGCCATTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPLSEFWTRSHRRGGSRCLPQLH*YGRAIP Trigger: TGGAATGGCTCGGCCATACCAATGCAACTGTGGAAG...GCACCTTGAACCCCCACGCCTGTGAGACCTTGTCCAAAATTCACTAAGAGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR-3UTR GCA 90 bp | ATCGTTAACGTCTCTGCTCTTGGTGCTGAGGGGCACAATGGGAGTTCTTATGTGTTGTGGATGGCTTGCTaGTCTTTAATGGCTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: IVNVSALGAEGHNGSSYVLWMAC*SLMAAP Trigger: AGGGGCAGCCATTAAAGAGCAGCAAGCCATCCACAA...CACATAAGAACTCCCATTGTGCCCCTCAGCACCAAGAGCAGAGACGTTAACGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAGAAGGAGTTCATGGTTTTTATGACTTAGCGTGGAAGCCAAACTATCACGGTGGTATAGGCTCCTaGTACCCCACCCAGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: RQEGVHGFYDLAWKPNYHGGIGS*YPTQTP Trigger: GGGAGTCTGGGTGGGGTACCAGGAGCCTATACCACC...GTGATAGTTTGGCTTCCACGCTAAGTCATAAAAACCATGAACTCCTTCTTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CAA 90 bp | GTTTCTTATATTCCGGTGGGCCTTCACAGTAGATGTCTTCCACAGTaGCATTGGTATGGCCGAGCCATTCCACCAGCCACTTCAACTTAC | + |
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Preference number: 2 (lower is better) Translates to: VSYIPVGLHSRCLPQ*HWYGRAIPPATSTY Trigger: GTAAGTTGAAGTGGCTGGTGGAATGGCTCGGCCATACCAATGCAACTGTGGAAGACATCTACTGTGAAGGCCCACCGGAATATAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
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| 3UTR CAA 90 bp | CTCCGACTGTACAGTGCAGGCGTCCTCCAGCAGCATATGATGATGTaGCTTATTAGAACAAAGGAAAAGGCATTCCAAGGCCAGCGAATG | + |
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Preference number: 2 (lower is better) Translates to: LRLYSAGVLQQHMMM*LIRTKEKAFQGQRM Trigger: CATTCGCTGGCCTTGGAATGCCTTTTCCTTTGTTCTAATAAGCAACATCATCATATGCTGCTGGAGGACGCCTGCACTGTACAGTCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CAA 90 bp | CTCCGCCTAATCCTGCTCCCATTCCCTCCTTCCCAGATGTCGACTTaGAGAATATTCTCCAACAAATGCTCCAGCAACCGTTTTACACAG | + |
|
Preference number: 2 (lower is better) Translates to: LRLILLPFPPSQMST*RIFSNKCSSNRFTQ Trigger: CTGTGTAAAACGGTTGCTGGAGCATTTGTTGGAGAATATTCTCAAAGTCGACATCTGGGAAGGAGGGAATGGGAGCAGGATTAGGCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR TCA 90 bp | CACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGCTGCAGCGATGGTGTaGATAAGAAACTCCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HHWTGQLRMVILVVLALAAAAMV*IRNSLL Trigger: CAGAAGGGAGTTTCTTATTCACACCATCGCTGCAGC...TGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCACAAATTTGGGCAGGGATATTGTGGATGGCTTGCTGCTCTTTAATGGCTTTAAATGAGGTGTTCTaGGGGCCAATGGTGGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GSQIWAGILWMACCSLMALNEVF*GPMVVW Trigger: CCAGACCACCATTGGCCCTCAGAACACCTCATTTAA...AGCCATTAAAGAGCAGCAAGCCATCCACAATATCCCTGCCCAAATTTGTGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR-3UTR TCA 90 bp | CCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGAGTCATCATGCATTaGGTTCATCCAGGTCACGCA | + |
|
Preference number: 2 (lower is better) Translates to: PTPLDRTVKDGDTGSIGFRVIMH*VHPGHA Trigger: TGCGTGACCTGGATGAACTCAATGCATGATGACTCT...AAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTCTCCATAGAGGCAGCACACATAACCAGTTTGTGCCCGCAATGTCTTCCGCCATTCTGCTCCTGTaGTCCATTTACCTTCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: KALHRGSTHNQFVPAMSSAILLL*SIYLLM Trigger: CATCAGAAGGTAAATGGAGCACAGGAGCAGAATGGC...GGAAGACATTGCGGGCACAAACTGGTTATGTGTGCTGCCTCTATGGAGAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTCACTTCTGCTTCTTTTCTATTTCAACCGGGATCCTGGTACATACACGGCTCACAGGCACTGTGTaGCAGGTCAGTCACAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ASHFCFFSISTGILVHTRLTGTV*QVSHSK Trigger: TTTGCTGTGACTGACCTGCCACACAGTGCCTGTGAG...CCGTGTATGTACCAGGATCCCGGTTGAAATAGAAAAGAAGCAGAAGTGAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR TCA 90 bp | GAATCAGTTGTGGACACTATCCTATACTCAGAAACTGAACTTGTGCCCTCAACTCCTCTCTCTCCCCTCTaGGGTGGACACAATGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: ESVVDTILYSETELVPSTPLSPL*GGHNEL Trigger: CAGTTCATTGTGTCCACCTCAGAGGGGAGAGAGAGG...AGTTGAGGGCACAAGTTCAGTTTCTGAGTATAGGATAGTGTCCACAACTGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR GCA 90 bp | GAATCAGTTGTGGACACTATCCTATACTCAGAAACTGAACTTGTGCCCTCAACTCGTGGGGGTTCAAGGTaGGGTAGGGGATGTATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ESVVDTILYSETELVPSTRGGSR*GRGCIW Trigger: CCAAATACATCCCCTACCGCACCTTGAACCCCCACG...AGTTGAGGGCACAAGTTCAGTTTCTGAGTATAGGATAGTGTCCACAACTGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTCACTTCTGCTTCTTTTCTATTTCAACCGGGATCCTGGTACATACACGGGTAGAAAGTTTCCGATaGCAGCCGTGGAGTTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ASHFCFFSISTGILVHTRVESFR*QPWSLV Trigger: CACCAAACTCCACGGCTGCCATCGGAAACTTTCTAC...CCGTGTATGTACCAGGATCCCGGTTGAAATAGAAAAGAAGCAGAAGTGAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR CCA 90 bp | ATCGTTAACGTCTCTGCTCTTGGTGCTGAGGGGCACAATGGGAGTTCTTATGTGCTAGAGGACGATCATTaGTGGACTGAAACCTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: IVNVSALGAEGHNGSSYVLEDDH*WTETSS Trigger: AGAAGAGGTTTCAGTCCACCAATGATCGTCCTCTAG...CACATAAGAACTCCCATTGTGCCCCTCAGCACCAAGAGCAGAGACGTTAACGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 90 bp | CCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATaGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PHHWTGQLRMVILVV*ALAVSVLKGIHLQV Trigger: CACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CAA 90 bp | ATTTTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAAGAGCAGTTGGTGCTCTTAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: IFVTDGCEPPCGCWD*NSGPSEEQLVLLTT Trigger: AGTGGTTAAGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR GCA 90 bp | GACACAATGAACTGCCAAGATGCCCATTCAGGAATACAGGGCTTTTCGTCAAGGATATTGTGGATGGCTTaGTGCTCTTTAATGGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: DTMNCQDAHSGIQGFSSRILWMA*CSLMAA Trigger: GGCAGCCATTAAAGAGCAGCAAGCCATCCACAATAT...CCTTGACGAAAAGCCCTGTATTCCTGAATGGGCATCTTGGCAGTTCATTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR TCA 90 bp | GATGTCTTCCACAGTTGCATTGGTATGGCCGAGCCATTCCACCAGCCACTTCAACCGGAAAGTATGTCTTaGAATGGACTTGATATTGTT | + |
|
Preference number: 2 (lower is better) Translates to: DVFHSCIGMAEPFHQPLQPESMS*NGLDIV Trigger: AACAATATCAAGTCCATTTCAAGACATACTTTCCGG...TTGAAGTGGCTGGTGGAATGGCTCGGCCATACCAATGCAACTGTGGAAGACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR-3UTR TCA 90 bp | GAATCAGTTGTGGACACTATCCTATACTCAGAAACTGAACTTGTGCCCTCAACTGTAGACAGGCCTGGATaGCAGTCTGAATTCAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ESVVDTILYSETELVPSTVDRPG*QSEFKQ Trigger: CTGCTTGAATTCAGACTGTCATCCAGGCCTGTCTAC...AGTTGAGGGCACAAGTTCAGTTTCTGAGTATAGGATAGTGTCCACAACTGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR TCA 90 bp | GAATCAGTTGTGGACACTATCCTATACTCAGAAACTGAACTTGTGCCCTCAACTCATAATTCACACTCTTaGGTCCCCATGGGACGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: ESVVDTILYSETELVPSTHNSHS*VPMGRV Trigger: GACTCGTCCCATGGGGACTCAAGAGTGTGAATTATG...AGTTGAGGGCACAAGTTCAGTTTCTGAGTATAGGATAGTGTCCACAACTGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTCACTTCTGCTTCTTTTCTATTTCAACCGGGATCCTGGTACATACACGGCTGTTACAAAGCCTGTaGATGGCAGAGCTAGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: ASHFCFFSISTGILVHTRLLQSL*MAELDF Trigger: GAAATCTAGCTCTGCCATGCACAGGCTTTGTAACAG...CCGTGTATGTACCAGGATCCCGGTTGAAATAGAAAAGAAGCAGAAGTGAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGCAAGAAGGAGTTCATGGTTTTTATGACTTAGCGTGGAAGCCAAACTATCACAAGCAAAATGTCCTCTaGCAGATAGAGAGGCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: RQEGVHGFYDLAWKPNYHKQNVL*QIERPP Trigger: TGGAGGCCTCTCTATCTGGCAGAGGACATTTTGCTT...GTGATAGTTTGGCTTCCACGCTAAGTCATAAAAACCATGAACTCCTTCTTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR-3UTR CCA 90 bp | AACATAGCAAGCTCAAAAGCTCTCCATAGAGGCAGCACACATAACCAGTTTGTGAAGGTCTTCTCTACGTaGTCCCATTCCAGGAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: NIASSKALHRGSTHNQFVKVFST*SHSRKM Trigger: CATTTTCCTGGAATGGGACCACGTAGAGAAGACCTT...CACAAACTGGTTATGTGTGCTGCCTCTATGGAGAGCTTTTGAGCTTGCTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR-3UTR CCA 90 bp | GTAAAAGTCCAAGATGAAGGTAAAAGGATGCTGGAGAATTCTGGTTCACAATCTCAACCAGACTTATCCTaGGCAGAGGGTACTGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: VKVQDEGKRMLENSGSQSQPDLS*AEGTAV Trigger: GACAGCAGTACCCTCTGCCCAGGATAAGTCTGGTTG...AGATTGTGAACCAGAATTCTCCAGCATCCTTTTACCTTCATCTTGGACTTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR GCA 90 bp | GTAAAAGTCCAAGATGAAGGTAAAAGGATGCTGGAGAATTCTGGTTCACAATCTTCACACAGGCCATTCTaGTCCTGTGCTCCATTTACC | + |
|
Preference number: 2 (lower is better) Translates to: VKVQDEGKRMLENSGSQSSHRPF*SCAPFT Trigger: GGTAAATGGAGCACAGGAGCAGAATGGCCTGTGTGA...AGATTGTGAACCAGAATTCTCCAGCATCCTTTTACCTTCATCTTGGACTTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 90 bp | AATGCGTTCCCTCTTAGGTCCACATTTGTTAAGGAATCCAGGCCTTaGAAAATGTCTTTTGGGAGTGTCTGGAGATTGTTGTTTGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NAFPLRSTFVKESRP*KMSFGSVWRLLFAR Trigger: TCTTGCAAACAACAATCTCCAGACACTCCCAAAAGACATTTTCAAAGGCCTGGATTCCTTAACAAATGTGGACCTAAGAGGGAACGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CAA 90 bp | TTAAAACAACCACTTTATTATTCTCATAGAGTCCGGGTCACAAATTaGGGCAGGGATATTGTGGATGGCTTGCTGCTCTTTAATGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LKQPLYYSHRVRVTN*GRDIVDGLLLFNGC Trigger: GCAGCCATTAAAGAGCAGCAAGCCATCCACAATATCCCTGCCCAAATTTGTGACCCGGACTCTATGAGAATAATAAAGTGGTTGTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAGTCAGACGAAGAGCATAGCTTCCCCAAAGTTGCTCTGGTTGTTCCCATGTTTCCAGTAAAAGGCTaGGCAATGACTACATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: FKSDEEHSFPKVALVVPMFPVKG*AMTTYS Trigger: TGAATATGTAGTCATTGCTCAGCCTTTTACTGGAAA...CATGGGAACAACCAGAGCAACTTTGGGGAAGCTATGCTCTTCGTCTGACTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTCTTTCATTATGCTGTACCATCCTCCTTCAGTGGATGCTCCTGTACATGGCTCTGGTTGTTCCCATaGTACTCAAAATCTAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: LFFHYAVPSSFSGCSCTWLWLFP*YSKSRI Trigger: AATTCTAGATTTTGAGTATCATGGGAACAACCAGAG...CCATGTACAGGAGCATCCACTGAAGGAGGATGGTACAGCATAATGAAAGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR TCA 90 bp | GTAAAAGTCCAAGATGAAGGTAAAAGGATGCTGGAGAATTCTGGTTCACAATCTTCTTTGGAGACTGTGTaGTTATTGTGGAGACCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: VKVQDEGKRMLENSGSQSSLETV*LLWRPL Trigger: CAGGGGTCTCCACAATAATCACACAGTCTCCAAAGA...AGATTGTGAACCAGAATTCTCCAGCATCCTTTTACCTTCATCTTGGACTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR TCA 90 bp | AGACAACACCTTTTTATACTCTATGTTTGCACAGCAGCTGAATCACAGGTAATGGCCAGTCTAACTTCTTaGCAGACTCTGCTCCTCATA | + |
|
Preference number: 2 (lower is better) Translates to: RQHLFILYVCTAAESQVMASLTS*QTLLLI Trigger: TATGAGGAGCAGAGTCTGTCAAGAAGTTAGACTGGC...CATTACCTGTGATTCAGCTGCTGTGCAAACATAGAGTATAAAAAGGTGTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 90 bp | GCTTTGGAACTGTCAGCGACAACGAAGTACCAGTTGTCTTCAATCTaGAATGTTTCGATGTCATTGGGTTTTCGAATTTTGAGAACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ALELSATTKYQLSSI*NVSMSLGFRILRTS Trigger: TGAAGTTCTCAAAATTCGAAAACCCAATGACATCGAAACATTCAAGATTGAAGACAACTGGTACTTCGTTGTCGCTGACAGTTCCAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR-3UTR CCA 90 bp | AGACAACACCTTTTTATACTCTATGTTTGCACAGCAGCTGAATCACAGGTAATGTCAGTAGTGAGAAGATaGACTCTGATGGTTGGTATC | + |
|
Preference number: 2 (lower is better) Translates to: RQHLFILYVCTAAESQVMSVVRR*TLMVGI Trigger: GATACCAACCATCAGAGTCCATCTTCTCACTACTGA...CATTACCTGTGATTCAGCTGCTGTGCAAACATAGAGTATAAAAAGGTGTTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 90 bp | GTTATACACTTGAGTAAAGGAGTAATCGCTTCCGAGAATTGCATATaGGTAATTATTTATCTGAAGAGGTTGGAACACCATGGATCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: VIHLSKGVIASENCI*VIIYLKRLEHHGSS Trigger: CGAGGATCCATGGTGTTCCAACCTCTTCAGATAAATAATTACCAATATGCAATTCTCGGAAGCGATTACTCCTTTACTCAAGTGTATAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CAA 90 bp | GTACTTTTCCGTGAAACTATATCCTCAGCCTTTGAAAAGCAATGTTaGAGAGCCTACATGTACATAACAGGCATTGTGCTAGCTACTAAT | + |
|
Preference number: 2 (lower is better) Translates to: VLFRETISSAFEKQC*RAYMYITGIVLATN Trigger: ATTAGTAGCTAGCACAATGCCTGTTATGTACATGTAGGCTCTCAAACATTGCTTTTCAAAGGCTGAGGATATAGTTTCACGGAAAAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTTCATGGTTTTTATGACTTAGCGTGGAAGCCAAACTATCACTTTCACCAAAAGAAAAAGTGTCTATaGACAGCGACTGATAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: GVHGFYDLAWKPNYHFHQKKKCL*TATDKV Trigger: TACCTTATCAGTCGCTGTCCATAGACACTTTTTCTT...TTGGTGAAAGTGATAGTTTGGCTTCCACGCTAAGTCATAAAAACCATGAACTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CAA 90 bp | CTGAAACTTCACAAATTTGGCTTTCTCTGCATCCCAGTTATACACTaGAGTAAAGGAGTAATCGCTTCCGAGAATTGCATATTGGTAATT | + |
|
Preference number: 2 (lower is better) Translates to: LKLHKFGFLCIPVIH*SKGVIASENCILVI Trigger: AATTACCAATATGCAATTCTCGGAAGCGATTACTCCTTTACTCAAGTGTATAACTGGGATGCAGAGAAAGCCAAATTTGTGAAGTTTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR GCA 72 bp | GGGATGTGGGGCAGAAAACAACATGGACTAGGCAGCTaGTCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GMWGRKQHGLGS*SPPPPPSPPPP Trigger: AGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGAGCAGCTGCCTAGTCCATGTTGTTTTCTGCCCCACATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | TGGGGGTGGGGTGGAGCCTACCAGGTAGCTATTGTGTaGAGAGTGTTCACACAGGCCATTCTGCTCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: WGWGGAYQVAIV*RVFTQAILLLC Trigger: GCACAGGAGCAGAATGGCCTGTGTGAACACTCTCCACACAATAGCTACCTGGTAGGCTCCACCCCACCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | CTTTGCAGATGGCTTTGGCTAAGCAACAGCCTCGCCTaGGCCCATGCCAGAGCCCATGCTTCCTTCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCRWLWLSNSLA*AHARAHASFQE Trigger: TTCCTGGAAGGAAGCATGGGCTCTGGCATGGGCTCAGGCGAGGCTGTTGCTTAGCCAAAGCCATCTGCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | ACCATGGATCCTCGAGATGGCATCCTCTGGATGTCCTaGAAGGAGGAGCCGCCCCACTTCATGACTTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TMDPRDGILWMS*KEEPPHFMTLE Trigger: CTCTAAAGTCATGAAGTGGGGCGGCTCCTCCTTCCAGGACATCCAGAGGATGCCATCTCGAGGATCCATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CCA 72 bp | ACACCAGCTGGGCCTGTTGACCAGAGCACCAGGAGGTaGTTGCTCCCGAGGGGATTGGTTTTCAACAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TPAGPVDQSTRR*LLPRGLVFNKE Trigger: TTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | GTAGGCTTTACAGGACTGGTGGTTGATGATGGCTGTTaGCTGCAACACCAGCTGGGCCTGTTGACCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGFTGLVVDDGC*LQHQLGLLTRA Trigger: TGCTCTGGTCAACAGGCCCAGCTGGTGTTGCAGCCAACAGCCATCATCAACCACCAGTCCTGTAAAGCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | CGGCCCCTTGATCACTATCATGGTGGTATAGGCTCCTaGTACCCCACCCAGACTCCCATTCCCAGTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: RPLDHYHGGIGS*YPTQTPIPSSH Trigger: ATGTGAACTGGGAATGGGAGTCTGGGTGGGGTACCAGGAGCCTATACCACCATGATAGTGATCAAGGGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | GTGGTGACCCAGGGTGTTGCTTCTTTGGAGACTGTGTaGTTATTGTGGAGACCCCTGATGCTCCAGGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: VVTQGVASLETV*LLWRPLMLQAT Trigger: GGTTGCCTGGAGCATCAGGGGTCTCCACAATAATCACACAGTCTCCAAAGAAGCAACACCCTGGGTCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | TTCACTCTTGGGCTAGTGTGGCATAATTCACACTCTTaGGTCCCCATGGGACGAGTCCCCACTGGGATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FTLGLVWHNSHS*VPMGRVPTGMR Trigger: CCTCATCCCAGTGGGGACTCGTCCCATGGGGACTCAAGAGTGTGAATTATGCCACACTAGCCCAAGAGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | CTATTTCAACCGGGATCCTGGTACATACACGGGCCATaGCAACCGTTCAGAGATGGCTTCGGCCCCTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: LFQPGSWYIHGP*QPFRDGFGPLI Trigger: GATCAAGGGGCCGAAGCCATCTCTGAACGGTTGTCATGGCCCGTGTATGTACCAGGATCCCGGTTGAAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | TTCCGGTGGGCCTTCACAGTAGATGTCTTCCACAGTTaGATTGGTATGGCCGAGCCATTCCACCAGCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: FRWAFTVDVFHS*IGMAEPFHQPL Trigger: AAGTGGCTGGTGGAATGGCTCGGCCATACCAATGCAACTGTGGAAGACATCTACTGTGAAGGCCCACCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR GCA 72 bp | CAACCAGACTTATCCTGGGCAGAGGGTACTGCTGTCTaGCTACCTCCATCCAGTGGGAACATAGCAAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QPDLSWAEGTAV*LPPSSGNIASS Trigger: TGAGCTTGCTATGTTCCCACTGGATGGAGGTAGGCAGACAGCAGTACCCTCTGCCCAGGATAAGTCTGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | CAGCTGGGCCTGTTGACCAGAGCACCAGGAGGTGGTTaGTCCCGAGGGGATTGGTTTTCAACAAAGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QLGLLTRAPGGG*SRGDWFSTKKN Trigger: ATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | TCCTCCTTTCTCTTCCTTCTCCCTCTCTCTCCCCTCTaGGGTGGACACAATGAACTGCCAAGATGCCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSFLFLLPLSPL*GGHNELPRCPF Trigger: GAATGGGCATCTTGGCAGTTCATTGTGTCCACCTCAGAGGGGAGAGAGAGGGAGAAGGAAGAGAAAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | GTGGGCCTTCACAGTAGATGTCTTCCACAGTTGCATTaGTATGGCCGAGCCATTCCACCAGCCACTTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: VGLHSRCLPQLH*YGRAIPPATST Trigger: AGTTGAAGTGGCTGGTGGAATGGCTCGGCCATACCAATGCAACTGTGGAAGACATCTACTGTGAAGGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CCA 72 bp | CTCTGCCAGATAGAGAGGCCTCCAGGGCCAGCATGTTaGGAGGCAAGTGCTCTCCATAATTTACAATCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LCQIERPPGPAC*EASALHNLQST Trigger: GGTAGATTGTAAATTATGGAGAGCACTTGCCTCCCAACATGCTGGCCCTGGAGGCCTCTCTATCTGGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGTCAGACGAAGAGCATAGCTTCCCCAAAGTTGCTCTGGTTGTTCCCATGTCCAGGGCCAGCATGTaGGGAGGCAAGTGCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FKSDEEHSFPKVALVVPMSRASM*GGKCSP Trigger: TGGAGAGCACTTGCCTCCCAACATGCTGGCCCTGGA...CATGGGAACAACCAGAGCAACTTTGGGGAAGCTATGCTCTTCGTCTGACTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCGTTAACGTCTCTGCTCTTGGTGCTGAGGGGCACAATGGGAGTTCTTATGTGTTACAGGACTGGTGGTaGATGATGGCTGTTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: IVNVSALGAEGHNGSSYVLQDWW*MMAVGC Trigger: GCAGCCAACAGCCATCATCAACCACCAGTCCTGTAA...CACATAAGAACTCCCATTGTGCCCCTCAGCACCAAGAGCAGAGACGTTAACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | CCCTGGAGCACACTAAGCATTGAGCTGGTTCCTACTTaGCTTCCTAGGTGCCTTAGTCTTACAGTATGGACC | + |
|
Preference number: 3 (lower is better) Translates to: PWSTLSIELVPT*LPRCLSLTVWT Trigger: GGTCCATACTGTAAGACTAAGGCACCTAGGAAGGCAAGTAGGAACCAGCTCAATGCTTAGTGTGCTCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | AGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATaGCAGCCGTGGAGTTTGGTGTCTCATGCGCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSRSRTVESFR*QPWSLVSHALK Trigger: CTTAAGCGCATGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 |
||
| 3UTR CCA 72 bp | CCTACTTGCCTTCCTAGGTGCCTTAGTCTTACAGTATaGACCTGTTCTCCTCATTCTCTCCCCAGAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PTCLPRCLSLTV*TCSPHSLPRGK Trigger: CTTCCCTCTGGGGAGAGAATGAGGAGAACAGGTCCATACTGTAAGACTAAGGCACCTAGGAAGGCAAGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | AGTTCCAAATATTCAAGGGAGATAACTGACTTGGAGTaGACCCAGACCCAGTTATCTGTGGCCAGAAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SSKYSREITDLE*TQTQLSVARRG Trigger: GCCCCTTCTGGCCACAGATAACTGGGTCTGGGTGCACTCCAAGTCAGTTATCTCCCTTGAATATTTGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | AGGTCACGCACTGTAGAAAGTTTCCGATGGCAGCCGTaGAGTTTGGTGTCTCATGCGCTTAAGTCAACTATG | + |
|
Preference number: 3 (lower is better) Translates to: RSRTVESFRWQP*SLVSHALKSTM Trigger: CATAGTTGACTTAAGCGCATGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CCA 72 bp | ATTCAGGTGAGTTCGATGCTACCTCTTAGTGAATTTTaGACAAGGTCTCACAGGCGTGGGGGTTCAAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: IQVSSMLPLSEF*TRSHRRGGSRC Trigger: GCACCTTGAACCCCCACGCCTGTGAGACCTTGTCCAAAATTCACTAAGAGGTAGCATCGAACTCACCTGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | AATTGGGCAGAAAGCACAACCAGATCTCTTGGGATGTaGGGCAGAAAACAACATGGACTAGGCAGCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NWAESTTRSLGM*GRKQHGLGSCS Trigger: AGAGCAGCTGCCTAGTCCATGTTGTTTTCTGCCCCACATCCCAAGAGATCTGGTTGTGCTTTCTGCCCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | AACACTTTCATTCCTCAAGGGGCAGTGTTTGCACCCTaGAGCACACTAAGCATTGAGCTGGTTCCTACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NTFIPQGAVFAP*STLSIELVPTC Trigger: GCAAGTAGGAACCAGCTCAATGCTTAGTGTGCTCCAGGGTGCAAACACTGCCCCTTGAGGAATGAAAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | TCCTGCTCCCATTCCCTCCTTCCCAGATGTCGACTTTaGGAATATTCTCCAACAAATGCTCCAGCAACCGTT | + |
|
Preference number: 3 (lower is better) Translates to: SCSHSLLPRCRL*EYSPTNAPATV Trigger: AACGGTTGCTGGAGCATTTGTTGGAGAATATTCTCAAAGTCGACATCTGGGAAGGAGGGAATGGGAGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | AAGCTCTCCATAGAGGCAGCACACATAACCAGTTTGTaGCCGCAATGTCTTCCCTACACACTTTCTTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KLSIEAAHITSL*PQCLPYTLSFA Trigger: GGCAAAAGAAAGTGTGTAGGGAAGACATTGCGGGCACAAACTGGTTATGTGTGCTGCCTCTATGGAGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | ACCGCGTATACGTCCTCCATGTTAGGAATGTCGGTTTaGTTAGTGAATAGCTGTGTTGCTTTGCTCCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: TAYTSSMLGMSV*LVNSCVALLHW Trigger: CCAGTGGAGCAAAGCAACACAGCTATTCACTAACCAAACCGACATTCCTAACATGGAGGACGTATACGCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CCA 72 bp | GGCCTCTGGTTAGAAAGACTTCTTATGCAGATGTTCTaGGCTCTGCAGGCAAGTGTTCCAATTTGCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLWLERLLMQMF*ALQASVPICKA Trigger: TGCCTTGCAAATTGGAACACTTGCCTGCAGAGCCCAGAACATCTGCATAAGAAGTCTTTCTAACCAGAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | GAAAAGAGACATTTCAACTCCAGAGCTCGCGAGCTCTaGAGCTGTCAGAGGCTTTTGTTAGCATCATTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EKRHFNSRAREL*SCQRLLLASLC Trigger: GCACAATGATGCTAACAAAAGCCTCTGACAGCTCCAGAGCTCGCGAGCTCTGGAGTTGAAATGTCTCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | TTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTCGGAAGAGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FVTDGCEPPCGC*DLNSGPSEEQL Trigger: CAACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | ACTCTTCTTTCATTATGCTGTACCATCCTCCTTCAGTaGATGCTCCTGTACATGGCAGAGGGGGAATCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLLSLCCTILLQ*MLLYMAEGESS Trigger: GCTTGATTCCCCCTCTGCCATGTACAGGAGCATCCACTGAAGGAGGATGGTACAGCATAATGAAAGAAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTATTTATCTGAAGAGGTaGGAACACCATGGATCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: PTPLDRTVKDGDTGSIGFIYLKR*EHHGSS Trigger: CGAGGATCCATGGTGTTCCAACCTCTTCAGATAAAT...AAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR-3UTR CAA 90 bp | GAATCAGTTGTGGACACTATCCTATACTCAGAAACTGAACTTGTGCCCTCAACTTCTTTGCAGATGGCTTaGGCTAAGCAACAGCCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: ESVVDTILYSETELVPSTSLQMA*AKQQPR Trigger: GCGAGGCTGTTGCTTAGCCAAAGCCATCTGCAAAGA...AGTTGAGGGCACAAGTTCAGTTTCTGAGTATAGGATAGTGTCCACAACTGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | GTCAAGCAGATGTACACATCACCTTTCACAGAGAAGTaGTTCACCGCGTATACGTCCTCCATGTTAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: VKQMYTSPFTEK*FTAYTSSMLGM Trigger: CATTCCTAACATGGAGGACGTATACGCGGTGAAGCACTTCTCTGTGAAAGGTGATGTGTACATCTGCTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR GCA 72 bp | ATTTTTGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IFVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | TTGTGGACACTATCCTATACTCAGAAACTGAACTTGTaGCCTCAACTGCTAAGGCCTCAGACTCTGGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LWTLSYTQKLNL*PQLLRPQTLGL Trigger: AAGACCCAGAGTCTGAGGCCTTAGCAGTTGAGGGCACAAGTTCAGTTTCTGAGTATAGGATAGTGTCCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | CTAAGCATTGAGCTGGTTCCTACTTGCCTTCCTAGGTaGCTTAGTCTTACAGTATGGACCTGTTCTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSIELVPTCLPR*LSLTVWTCSPH Trigger: ATGAGGAGAACAGGTCCATACTGTAAGACTAAGGCACCTAGGAAGGCAAGTAGGAACCAGCTCAATGCTTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | CCTGTTCTCCTCATTCTCTCCCCAGAGGGAAGCTCCTaGTATCTTACTCTTCTTTCATTATGCTGTACCATC | + |
|
Preference number: 3 (lower is better) Translates to: PVLLILSPEGSS*YLTLLSLCCTI Trigger: GATGGTACAGCATAATGAAAGAAGAGTAAGATACCAGGAGCTTCCCTCTGGGGAGAGAATGAGGAGAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | GCTGAGAACTACTGGACAGGATTAAATGAGGTGTTCTaGGGGCCAATGGTGGTCTGGCTATTTCAAGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: AENYWTGLNEVF*GPMVVWLFQGI Trigger: AATACCTTGAAATAGCCAGACCACCATTGGCCCTCAGAACACCTCATTTAATCCTGTCCAGTAGTTCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CCA 72 bp | CAGGGCTTTTCGTCAAGGAGTTCAGTAGTGAGAAGATaGACTCTGATGGTTGGTATCTTTGCAGATGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QGFSSRSSVVRR*TLMVGIFADGF Trigger: AAAGCCATCTGCAAAGATACCAACCATCAGAGTCCATCTTCTCACTACTGAACTCCTTGACGAAAAGCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | AAATCTCTCAAAAAGTGTGTGTGTGCATGCAAGGTGTaGGTGTATGCAAGTGTGCTTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KSLKKCVCACKV*VYASVLVCVCV Trigger: CACACACACACACACAAGCACACTTGCATACACCCACACCTTGCATGCACACACACACTTTTTGAGAGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR CAA 90 bp | AAATCAAACATGAGCCTCACAGGCACTGTGTGGCAGGTCAGTCACAGCAAATCCACAACGAAGTACCAGTaGTCTTCAATCTTGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: KSNMSLTGTVWQVSHSKSTTKYQ*SSILNV Trigger: AACATTCAAGATTGAAGACAACTGGTACTTCGTTGT...GGATTTGCTGTGACTGACCTGCCACACAGTGCCTGTGAGGCTCATGTTTGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR-3UTR CAA 90 bp | AGACAACACCTTTTTATACTCTATGTTTGCACAGCAGCTGAATCACAGGTAATGGCACAACCAGATCTCTaGGGATGTGGGGCAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: RQHLFILYVCTAAESQVMAQPDL*GCGAEN Trigger: GTTTTCTGCCCCACATCCCAAGAGATCTGGTTGTGC...CATTACCTGTGATTCAGCTGCTGTGCAAACATAGAGTATAAAAAGGTGTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | ATAAAAGTGAGTTCTCTTGCTCCAACTTGGGACAACTaGAAAGAGACATTTCAACTCCAGAGCTCGCGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IKVSSLAPTWDN*KETFQLQSSRA Trigger: AGCTCGCGAGCTCTGGAGTTGAAATGTCTCTTTTCAGTTGTCCCAAGTTGGAGCAAGAGAACTCACTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | TCAGGTTGGTTAAGATCTTTCCTGTTACAAAGCCTGTaGATGGCAGAGCTAGATTTCAACTCCGACTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: SGWLRSFLLQSL*MAELDFNSDCT Trigger: TGTACAGTCGGAGTTGAAATCTAGCTCTGCCATGCACAGGCTTTGTAACAGGAAAGATCTTAACCAACCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | CGAGGGGATTGGTTTTCAACAAAGAAGAATGGCCTCTaGTTAGAAAGACTTCTTATGCAGATGTTCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RGDWFSTKKNGL*LERLLMQMFWA Trigger: AGCCCAGAACATCTGCATAAGAAGTCTTTCTAACCAGAGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | TGGGAACTGGATGGTTACAGAAGTATCTCAAATAATTaGGCAGAAAGCACAACCAGATCTCTTGGGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: WELDGYRSISNN*AESTTRSLGMW Trigger: CCACATCCCAAGAGATCTGGTTGTGCTTTCTGCCCAATTATTTGAGATACTTCTGTAACCATCCAGTTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTAGTGATGGGAACTaGATGGTTACAGAAGTATCTCAAATAATTGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCSDGN*MVTEVSQIIGQ Trigger: CTGCCCAATTATTTGAGATACTTCTGTAACCATCCAGTTCCCATCACTACACACACACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR-3UTR CAA 90 bp | AGACAACACCTTTTTATACTCTATGTTTGCACAGCAGCTGAATCACAGGTAATGGCAGAGTTAATCATGTaGTGTGTGGTTCCACGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RQHLFILYVCTAAESQVMAELIM*CVVPRC Trigger: GCACCGTGGAACCACACACAACATGATTAACTCTGC...CATTACCTGTGATTCAGCTGCTGTGCAAACATAGAGTATAAAAAGGTGTTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | ATCTATCTTTACCCAACATCCTTTCCTATCCTACGTTaGTCCTTACTTCCTCAGCAAACCTCTCTGCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: IYLYPTSFPILR*SLLPQQTSLLL Trigger: TAGAAGCAGAGAGGTTTGCTGAGGAAGTAAGGAGCAACGTAGGATAGGAAAGGATGTTGGGTAAAGATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | TCCCAGATGTCGACTTTGAGAATATTCTCCAACAAATaGTCCAGCAACCGTTTTACACAGTCTGGTTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: SQMSTLRIFSNK*SSNRFTQSGYQ Trigger: CTGATAACCAGACTGTGTAAAACGGTTGCTGGAGCATTTGTTGGAGAATATTCTCAAAGTCGACATCTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | CAATTGTGTGTTTTCATCTTTGGGAGTAGGTGTAAGTaGCTAAGAGTTCCTGGAGCCATCTTTCAGGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: QLCVFIFGSRCK*LRVPGAIFQVI Trigger: TATCACCTGAAAGATGGCTCCAGGAACTCTTAGGCACTTACACCTACTCCCAAAGATGAAAACACACAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | CACTTTATTATTCTCATAGAGTCCGGGTCACAAATTTaGGCAGGGATATTGTGGATGGCTTGCTGCTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HFIILIESGSQI*AGILWMACCSL Trigger: TAAAGAGCAGCAAGCCATCCACAATATCCCTGCCCAAATTTGTGACCCGGACTCTATGAGAATAATAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | AACTTTTGTCTTATAAAAGGTAACTTCCCACACCACTaGACCGGACAGTTAAGGATGGTGATACTGGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NFCLIKGNFPHH*TGQLRMVILVV Trigger: TACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTATAAGACAAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CCA 72 bp | TTATCCATCTTTACGAATGAAGAAGTGGGCTCAGGTTaGTTAAGATCTTTCCTGTTACAAAGCCTGTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSIFTNEEVGSG*LRSFLLQSLCM Trigger: CATGCACAGGCTTTGTAACAGGAAAGATCTTAACCAACCTGAGCCCACTTCTTCATTCGTAAAGATGGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | TTCAACGTATTAACAGCAAGTCACCAACCATTCAGGTaGGTTCGATGCTACCTCTTAGTGAATTTTGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: FNVLTASHQPFR*VRCYLLVNFGQ Trigger: TTGTCCAAAATTCACTAAGAGGTAGCATCGAACTCACCTGAATGGTTGGTGACTTGCTGTTAATACGTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | TTCCAGGAACAGCTTTCTTCCATATCTGAGGAGAAATaGCATATCTATAAAAGTGAGTTCTCTTGCTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FQEQLSSISEEK*HIYKSEFSCSN Trigger: GTTGGAGCAAGAGAACTCACTTTTATAGATATGTCATTTCTCCTCAGATATGGAAGAAAGCTGTTCCTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR TCA 72 bp | ACAACACCTTTTTATACTCTATGTTTGCACAGCAGCTaGATCACAGGTAATGCTGAAAGCAGACTTAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: TTPFYTLCLHSS*ITGNAESRLND Trigger: ATCATTAAGTCTGCTTTCAGCATTACCTGTGATTCAGCTGCTGTGCAAACATAGAGTATAAAAAGGTGTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | ATTGAAGAAAGACAACACCTTTTTATACTCTATGTTTaGACAGCAGCTGAATCACAGGTAATGCTGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: IEERQHLFILYV*TAAESQVMLKA Trigger: TGCTTTCAGCATTACCTGTGATTCAGCTGCTGTGCAAACATAGAGTATAAAAAGGTGTTGTCTTTCTTCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CCA 72 bp | GGTAATGCTGAAAGCAGACTTAATGATTCCAAGAGATaGATGATCTTCTCACAGATGGTTTTAAACCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GNAESRLNDSKR*MIFSQMVLNLF Trigger: AAACAGGTTTAAAACCATCTGTGAGAAGATCATCCATCTCTTGGAATCATTAAGTCTGCTTTCAGCATTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR GCA 72 bp | ATACACTTGAGTAAAGGAGTAATCGCTTCCGAGAATTaGATATTGGTAATTATTTATCTGAAGAGGTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IHLSKGVIASEN*ILVIIYLKRLE Trigger: TTCCAACCTCTTCAGATAAATAATTACCAATATGCAATTCTCGGAAGCGATTACTCCTTTACTCAAGTGTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR GCA 72 bp | ATTATTATATCTAAGTACATTGTAGCTGTCTTCAGATaGACCAGAAGAGGGTATCGGATTTTTGTTACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: IIISKYIVAVFR*TRRGYRIFVTD Trigger: ATCTGTAACAAAAATCCGATACCCTCTTCTGGTGCATCTGAAGACAGCTACAATGTACTTAGATATAATAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | CCAGCTGGGCCTGTTGACCAGAGCACCAGGAGGTGGTaGCTCCCGAGGGGATTGGTTTTCAACAAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAGPVDQSTRRW*LPRGLVFNKEE Trigger: TTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | TGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTaGGTGCTCTTAACCACTGAGCCGTCTCTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSGPSEEQ*VLLTTEPSLQP Trigger: GGGCTGGAGAGACGGCTCAGTGGTTAAGAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | ATTCCGGTGGGCCTTCACAGTAGATGTCTTCCACAGTaGCATTGGTATGGCCGAGCCATTCCACCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IPVGLHSRCLPQ*HWYGRAIPPAT Trigger: AGTGGCTGGTGGAATGGCTCGGCCATACCAATGCAACTGTGGAAGACATCTACTGTGAAGGCCCACCGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CAA 72 bp | CCCCTTAGGTGGGAAGGTCTGATGTCTGGTAGGAACTaGACCACACGGTCTGGAGCTGTAGGCTTTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLRWEGLMSGRN*TTRSGAVGFTG Trigger: TCCTGTAAAGCCTACAGCTCCAGACCGTGTGGTCAAGTTCCTACCAGACATCAGACCTTCCCACCTAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTCGGAAGAGCAGTTGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQLVL Trigger: GAGCACCAACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | AAATCAAACATGAGCCTCACAGGCACTGTGTGGCAGGTCAGTCACAGCAAATCCCACGGCAGGGCATTTTaGCTTCGCTGGTTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSNMSLTGTVWQVSHSKSHGRAF*LRWFLP Trigger: GGGAAGAAACCAGCGAAGCCAAAATGCCCTGCCGTG...GGATTTGCTGTGACTGACCTGCCACACAGTGCCTGTGAGGCTCATGTTTGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | CTACCTCTTAGTGAATTTTGGACAAGGTCTCACAGGCGTGGGGGTTCAAGGTGCAGGAGGAACGGTGCGTaGAATGGATCTCGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSEFWTRSHRRGGSRCRRNGA*NGSRIL Trigger: GAGAATGCGAGATCCATTCCACGCACCGTTCCTCCT...GCACCTTGAACCCCCACGCCTGTGAGACCTTGTCCAAAATTCACTAAGAGGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGCCGTGGAGTTTGGTGTCTCACTTCCACAGTTGCATTaGTATGGCCGAGCCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVTHCRKFPMAAVEFGVSLPQLH*YGRAIP Trigger: TGGAATGGCTCGGCCATACCAATGCAACTGTGGAAG...TGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198045.5 |
||
| CDS-3UTR CCA 90 bp | CCCCATGGGACGAGTCCCCACTGGGATGAGGCTGAGACCAGGCATCTATCTTTAAAGGTCTTCTCTACGTaGTCCCATTCCAGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PHGTSPHWDEAETRHLSLKVFST*SHSRKM Trigger: CATTTTCCTGGAATGGGACCACGTAGAGAAGACCTT...TAAAGATAGATGCCTGGTCTCAGCCTCATCCCAGTGGGGACTCGTCCCATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | CACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCACACGGCAGGGCATTTTaGCTTCGCTGGTTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HHWTGQLRMVILVVLALAHGRAF*LRWFLP Trigger: GGGAAGAAACCAGCGAAGCCAAAATGCCCTGCCGTG...TGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CAA 72 bp | CTCATAGAGTCCGGGTCACAAATTTGGGCAGGGATATaGTGGATGGCTTGCTGCTCTTTAATGGCTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIESGSQIWAGI*WMACCSLMAAP Trigger: AGGGGCAGCCATTAAAGAGCAGCAAGCCATCCACAATATCCCTGCCCAAATTTGTGACCCGGACTCTATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| CDS-3UTR GCA 90 bp | GTTGGGAGGCAAGTGCTCTCCATAATTTACAATCTACCAGCTGTCAGGAGACTCCATCAGGAGGAACGGTaGGTGGAATGGATCTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGRQVLSIIYNLPAVRRLHQEER*VEWISH Trigger: ATGCGAGATCCATTCCACGCACCGTTCCTCCTGATG...GAGTCTCCTGACAGCTGGTAGATTGTAAATTATGGAGAGCACTTGCCTCCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| CDS-3UTR GCA 90 bp | TGTCTTTTGGGAGTGTCTGGAGATTGTTGTTTGCAAGACTCAAGAGCTGCAGCGCATCAGGAGGAACGGTaGGTGGAATGGATCTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLLGVSGDCCLQDSRAAAHQEER*VEWISH Trigger: ATGCGAGATCCATTCCACGCACCGTTCCTCCTGATG...CGCTGCAGCTCTTGAGTCTTGCAAACAACAATCTCCAGACACTCCCAAAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197123.2 |
||
| CDS-3UTR GCA 90 bp | CACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCACATCAGGAGGAACGGTaGGTGGAATGGATCTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HHWTGQLRMVILVVLALAHQEER*VEWISH Trigger: ATGCGAGATCCATTCCACGCACCGTTCCTCCTGATG...TGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | TCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCACACGGCAGGGCATTTTaGCTTCGCTGGTTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSCIEFIQVTHCRKFPMAHGRAF*LRWFLP Trigger: GGGAAGAAACCAGCGAAGCCAAAATGCCCTGCCGTG...TGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTGGAGATTGTTGTTTGCAAGACTCAAGAGCTGCAGCGATGGTGTGAATCACGGCAGGGCATTTTaGCTTCGCTGGTTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVWRLLFARLKSCSDGVNHGRAF*LRWFLP Trigger: GGGAAGAAACCAGCGAAGCCAAAATGCCCTGCCGTG...ATTCACACCATCGCTGCAGCTCTTGAGTCTTGCAAACAACAATCTCCAGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197123.2 |
||
| CDS-3UTR CCA 90 bp | CCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTCTTCCACAGTTGCATTaGTATGGCCGAGCCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLDRTVKDGDTGSIGFLPQLH*YGRAIP Trigger: TGGAATGGCTCGGCCATACCAATGCAACTGTGGAAG...AAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | ACGCACTGTAGAAAGTTTCCGATGGCAGCCGTGGAGTTTGGTGTCTCATGCGCTAAGGTCTTCTCTACGTaGTCCCATTCCAGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: THCRKFPMAAVEFGVSCAKVFST*SHSRKM Trigger: CATTTTCCTGGAATGGGACCACGTAGAGAAGACCTT...AGCGCATGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198045.5 |
||
| CDS-3UTR CCA 90 bp | GCATCTCACTTCTGCTTCTTTTCTATTTCAACCGGGATCCTGGTACATACACGGCGAGATGGCATCCTCTaGATGTCCTGGAAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASHFCFFSISTGILVHTRRDGIL*MSWKEE Trigger: CTCCTCCTTCCAGGACATCCAGAGGATGCCATCTCG...CCGTGTATGTACCAGGATCCCGGTTGAAATAGAAAAGAAGCAGAAGTGAGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | GGGTCACAAATTTGGGCAGGGATATTGTGGATGGCTTGCTGCTCTTTAATGGCTGAGGTTGGAACACCATaGATCCTCGAGATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GSQIWAGILWMACCSLMAEVGTP*ILEMAS Trigger: GGATGCCATCTCGAGGATCCATGGTGTTCCAACCTC...AGCCATTAAAGAGCAGCAAGCCATCCACAATATCCCTGCCCAAATTTGTGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | GGAGTTCTTATGTGGGAGTCGGCAGAGTTAATCATGTaGTGTGTGGTTCCACGGTGCAGAGACTGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVLMWESAELIM*CVVPRCRDCSP Trigger: TGGAGAACAGTCTCTGCACCGTGGAACCACACACAACATGATTAACTCTGCCGACTCCCACATAAGAACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | CCCCATGGGACGAGTCCCCACTGGGATGAGGCTGAGACCAGGCATCTATCTTTAAGTTGTCTTCAATCTTaGATGTTTCGATGTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHGTSPHWDEAETRHLSLSCLQS*MFRCHW Trigger: CCAATGACATCGAAACATTCAAGATTGAAGACAACT...TAAAGATAGATGCCTGGTCTCAGCCTCATCCCAGTGGGGACTCGTCCCATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | CACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCATTAAATGAGGTGTTCTaGGGGCCAATGGTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHWTGQLRMVILVVLALALNEVF*GPMVVW Trigger: CCAGACCACCATTGGCCCTCAGAACACCTCATTTAA...TGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGGATACGTGTGTGAATaGTCTGGGTGCCTGAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGNFPHHWTGQLRMVILVGYVCE*SGCLNV Trigger: AACGTTCAGGCACCCAGATCATTCACACACGTATCC...TACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | TTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGCCGTGGAGTAGTGAATCAAAGACTTaGGTCCCCGGAAAGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSRSRTVESFRWQPWSSESKT*VPGKYV Trigger: GACATACTTTCCGGGGACTCAAGTCTTTGATTCACT...ACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | GGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGCACGGCAGGGCATTTTaGCTTCGCTGGTTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQLRMVILVVLALAVSVLHGRAF*LRWFLP Trigger: GGGAAGAAACCAGCGAAGCCAAAATGCCCTGCCGTG...CAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTTTCATTATGCTGTACCATCCTCCTTCAGTGGATGCTCCTGTACATGGACAGTTGCATTGGTATaGCCGAGCCATTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFFHYAVPSSFSGCSCTWTVALV*PSHSTS Trigger: GCTGGTGGAATGGCTCGGCCATACCAATGCAACTGT...CCATGTACAGGAGCATCCACTGAAGGAGGATGGTACAGCATAATGAAAGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | TCAACAAAGAAGAATGGCCTCTGGTTAGAAAGACTTCTTATGCAGATGTTCTGGATCCTCTGGATGTCCTaGAAGGAGGAGCCGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: STKKNGLWLERLLMQMFWILWMS*KEEPPH Trigger: GTGGGGCGGCTCCTCCTTCCAGGACATCCAGAGGAT...CCAGAACATCTGCATAAGAAGTCTTTCTAACCAGAGGCCATTCTTCTTTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | CGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTCGAGATGGCATCCTCTaGATGTCCTGGAAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTVKDGDTGSIGFSSLSVRDGIL*MSWKEE Trigger: CTCCTCCTTCCAGGACATCCAGAGGATGCCATCTCG...AACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | AGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCATGGATCCTCGAGATaGCATCCTCTGGATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHHALSSSRSRTVESFRWHGSSR*HPLDVL Trigger: CAGGACATCCAGAGGATGCCATCTCGAGGATCCATG...CCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | GAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGCATGGATCCTCGAGATaGCATCCTCTGGATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESSCIEFIQVTHCRKFPMHGSSR*HPLDVL Trigger: CAGGACATCCAGAGGATGCCATCTCGAGGATCCATG...CATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CAA 72 bp | CGCACTGTAGAAAGTTTCCGATGGCAGCCGTGGAGTTaGGTGTCTCATGCGCTTAAGTCAACTATGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: RTVESFRWQPWS*VSHALKSTMTC Trigger: ACATGTCATAGTTGACTTAAGCGCATGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CAA 72 bp | GGTCCTAGTTCCAAATATTCAAGGGAGATAACTGACTaGGAGTGCACCCAGACCCAGTTATCTGTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPSSKYSREITD*ECTQTQLSVAR Trigger: TCTGGCCACAGATAACTGGGTCTGGGTGCACTCCAAGTCAGTTATCTCCCTTGAATATTTGGAACTAGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | ATCCTGCTCCCATTCCCTCCTTCCCAGATGTCGACTTaGAGAATATTCTCCAACAAATGCTCCAGCAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLPFPPSQMST*RIFSNKCSSNR Trigger: ACGGTTGCTGGAGCATTTGTTGGAGAATATTCTCAAAGTCGACATCTGGGAAGGAGGGAATGGGAGCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | CAGTTGTGGACACTATCCTATACTCAGAAACTGAACTaGTGCCCTCAACTGCTAAGGCCTCAGACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLWTLSYTQKLN*CPQLLRPQTLG Trigger: ACCCAGAGTCTGAGGCCTTAGCAGTTGAGGGCACAAGTTCAGTTTCTGAGTATAGGATAGTGTCCACAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | TCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAACAGCTGGGCCACAATaGCATAGAGCTGAGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSCIEFIQVTHCRKFPMATAGPQ*HRAECQ Trigger: TTGACACTCAGCTCTATGTCATTGTGGCCCAGCTGT...TGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGGAACGGTGCGTGGAATaGATCTCGCATTCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: HHALSSSRSRTVESFRWQERCVE*ISHSHI Trigger: TATGTGAGAATGCGAGATCCATTCCACGCACCGTTC...CTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTACAGTTGCATTGGTATaGCCGAGCCATTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTVKDGDTGSIGFSSLSVTVALV*PSHSTS Trigger: GCTGGTGGAATGGCTCGGCCATACCAATGCAACTGT...AACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | TTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGCCGTGGAGTTTTCTTATATTCCGGTaGGCCTTCACAGTAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSRSRTVESFRWQPWSFLIFR*AFTVDV Trigger: GACATCTACTGTGAAGGCCCACCGGAATATAAGAAA...ACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGAGCTGCAGCGATGGTGTaGATAAGAAACTCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSHHALSSSRSRTVESFRAAAMV*IRNSLL Trigger: CAGAAGGGAGTTTCTTATTCACACCATCGCTGCAGC...TCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGAACAGCTGGGCCACAATaGCATAGAGCTGAGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSHHALSSSRSRTVESFRTAGPQ*HRAECQ Trigger: TTGACACTCAGCTCTATGTCATTGTGGCCCAGCTGT...TCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | TGCTCCTTACTTCCTCAGCAAACCTCTCTGCTTCTAGAAACCCCAATTTATCACGGATACGTGTGTGAATaGTCTGGGTGCCTGAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLLPQQTSLLLETPIYHGYVCE*SGCLNV Trigger: AACGTTCAGGCACCCAGATCATTCACACACGTATCC...GTGATAAATTGGGGTTTCTAGAAGCAGAGAGGTTTGCTGAGGAAGTAAGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | CACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAAGTGAATCAAAGACTTaGGTCCCCGGAAAGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHWTGQLRMVILVVLALASESKT*VPGKYV Trigger: GACATACTTTCCGGGGACTCAAGTCTTTGATTCACT...TGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAAGTGAATCAAAGACTTaGGTCCCCGGAAAGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGNFPHHWTGQLRMVILVSESKT*VPGKYV Trigger: GACATACTTTCCGGGGACTCAAGTCTTTGATTCACT...TACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR GCA 90 bp | GGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGTGTGCATCAGGAGGAACGGTaGGTGGAATGGATCTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSIGFSSLSVERYSSASVHQEER*VEWISH Trigger: ATGCGAGATCCATTCCACGCACCGTTCCTCCTGATG...CACACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CTACCTCTTAGTGAATTTTGGACAAGGTCTCACAGGCGTGGGGGTTCAAGGTGCTCTTTTGGGAGTGTCTaGAGATTGTTGTTTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSEFWTRSHRRGGSRCSFGSV*RLLFAR Trigger: TCTTGCAAACAACAATCTCCAGACACTCCCAAAAGA...GCACCTTGAACCCCCACGCCTGTGAGACCTTGTCCAAAATTCACTAAGAGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | AGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGGGCGCTGAGAACTACTaGACAGGATTAAATGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHHALSSSRSRTVESFRWGAENY*TGLNEV Trigger: CACCTCATTTAATCCTGTCCAGTAGTTCTCAGCGCC...CCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGGAGTAACAGATGCCATTAAACGCTTATTTACACATCTTCACTGCAAAATCCTCTGGATGTCCTaGAAGGAGGAGCCGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFGVTDAIKRLFTHLHCKILWMS*KEEPPH Trigger: GTGGGGCGGCTCCTCCTTCCAGGACATCCAGAGGAT...TTTGCAGTGAAGATGTGTAAATAAGCGTTTAATGGCATCTGTTACTCCGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | GGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGTGTGGAGGTTGGAACACCATaGATCCTCGAGATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GSIGFSSLSVERYSSASVEVGTP*ILEMAS Trigger: GGATGCCATCTCGAGGATCCATGGTGTTCCAACCTC...CACACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CAA 72 bp | GTTTGTGCCCGCAATGTCTTCCCTACACACTTTCTTTaGCCTCTTCCCTTTAAGTCAGACGAAGAGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCARNVFPTHFL*PLPFKSDEEHS Trigger: GCTATGCTCTTCGTCTGACTTAAAGGGAAGAGGCAAAAGAAAGTGTGTAGGGAAGACATTGCGGGCACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | CTGTCTTCAGATGCACCAGAAGAGGGTATCGGATTTTaGTTACAGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSDAPEEGIGF*LQMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCTGTAACAAAAATCCGATACCCTCTTCTGGTGCATCTGAAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | CATCTTTCAGGTGATAAATCGTTAACGTCTCTGCTCTaGGTGCTGAGGGGCACAATGGGAGTTCTTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLSGDKSLTSLL*VLRGTMGVLMW Trigger: CCACATAAGAACTCCCATTGTGCCCCTCAGCACCAAGAGCAGAGACGTTAACGATTTATCACCTGAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | TACATGGCAGAGGGGGAATCAAGCCAGTCTAACTTCTaGACAGACTCTGCTCCTCATAGGGATACCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YMAEGESSQSNF*TDSAPHRDTIH Trigger: ATGAATGGTATCCCTATGAGGAGCAGAGTCTGTCAAGAAGTTAGACTGGCTTGATTCCCCCTCTGCCATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCTTAAATGAGGTGTTCTaGGGGCCAATGGTGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKSHHALSSSRSRTVESFLNEVF*GPMVVW Trigger: CCAGACCACCATTGGCCCTCAGAACACCTCATTTAA...GAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | TTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGCCGTGGAGTCCGGAAAGTATGTCTTaGAATGGACTTGATATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSSRSRTVESFRWQPWSPESMS*NGLDIV Trigger: AACAATATCAAGTCCATTTCAAGACATACTTTCCGG...ACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCTCCATAGAGGCAGCACACATAACCAGTTTGTGCCCGCAATGTCTTCCATAAAGCGTTATCTTTaGTACAAGTACACACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KALHRGSTHNQFVPAMSSIKRYL*YKYTRQ Trigger: CTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTAT...GGAAGACATTGCGGGCACAAACTGGTTATGTGTGCTGCCTCTATGGAGAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
||
| CDS-3UTR GCA 90 bp | GTAGAAAGTTTCCGATGGCAGCCGTGGAGTTTGGTGTCTCATGCGCTTAAGTCAATAAAGCGTTATCTTTaGTACAAGTACACACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VESFRWQPWSLVSHALKSIKRYL*YKYTRQ Trigger: CTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTAT...TGACTTAAGCGCATGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 |
||
| CDS-3UTR CCA 90 bp | CAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAAGGAGGAACGGTGCGTaGAATGGATCTCGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLRMVILVVLALAVSVLKRRNGA*NGSRIL Trigger: GAGAATGCGAGATCCATTCCACGCACCGTTCCTCCT...TTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | GGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTAGGAGGAACGGTGCGTaGAATGGATCTCGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDTGSIGFSSLSVERYSSRRNGA*NGSRIL Trigger: GAGAATGCGAGATCCATTCCACGCACCGTTCCTCCT...AGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGTAGGAGGAACGGTGCGTaGAATGGATCTCGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGSIGFSSLSVERYSSASRRNGA*NGSRIL Trigger: GAGAATGCGAGATCCATTCCACGCACCGTTCCTCCT...ACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CCA 90 bp | GGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTACAGTTGCATTGGTATaGCCGAGCCATTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDTGSIGFSSLSVERYSSTVALV*PSHSTS Trigger: GCTGGTGGAATGGCTCGGCCATACCAATGCAACTGT...AGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGTTTCTTATATTCCGGTaGGCCTTCACAGTAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHALSSSRSRTVESFRWQFLIFR*AFTVDV Trigger: GACATCTACTGTGAAGGCCCACCGGAATATAAGAAA...CTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | ATTCTCTCCCCAGAGGGAAGCTCCTGGTATCTTACTCTTCTTTCATTATGCTGTGGCGCTGAGAACTACTaGACAGGATTAAATGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILSPEGSSWYLTLLSLCCGAENY*TGLNEV Trigger: CACCTCATTTAATCCTGTCCAGTAGTTCTCAGCGCC...ACAGCATAATGAAAGAAGAGTAAGATACCAGGAGCTTCCCTCTGGGGAGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CCA 90 bp | CCCTTTAAGTCAGACGAAGAGCATAGCTTCCCCAAAGTTGCTCTGGTTGTTCCCGAAACTTCACAAATTTaGCTTTCTCTGCATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFKSDEEHSFPKVALVVPETSQI*LSLHPS Trigger: ACTGGGATGCAGAGAAAGCCAAATTTGTGAAGTTTC...GGGAACAACCAGAGCAACTTTGGGGAAGCTATGCTCTTCGTCTGACTTAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| 3UTR CAA 72 bp | GCAGATGTTCTGGGCTCTGCAGGCAAGTGTTCCAATTaGCAAGGCAAGAAGGAGTTCATGGTTTTTATGACT | + |
|
Preference number: 4 (lower is better) Translates to: ADVLGSAGKCSN*QGKKEFMVFMT Trigger: AGTCATAAAAACCATGAACTCCTTCTTGCCTTGCAAATTGGAACACTTGCCTGCAGAGCCCAGAACATCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CAA 72 bp | CCTTTGAAAATGTCTTTTGGGAGTGTCTGGAGATTGTaGTTTGCAAGACTCAAGAGCTGCAGCGATGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLKMSFGSVWRL*FARLKSCSDGV Trigger: CACACCATCGCTGCAGCTCTTGAGTCTTGCAAACAACAATCTCCAGACACTCCCAAAAGACATTTTCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197123.2 |
||
| 3UTR CAA 72 bp | AGGCCTTTGAAAATGTCTTTTGGGAGTGTCTGGAGATaGTTGTTTGCAAGACTCAAGAGCTGCAGCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPLKMSFGSVWR*LFARLKSCSDG Trigger: ACCATCGCTGCAGCTCTTGAGTCTTGCAAACAACAATCTCCAGACACTCCCAAAAGACATTTTCAAAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197123.2 |
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| CDS-3UTR TCA 90 bp | GGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCTGCAGCGATGGTGTaGATAAGAAACTCCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDTGSIGFSSLSVERYSSAAAMV*IRNSLL Trigger: CAGAAGGGAGTTTCTTATTCACACCATCGCTGCAGC...AGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 |
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| CDS-3UTR GCA 90 bp | CCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTCTGGAGATTGTTGTTTaGAAGACTCAAGTGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLDRTVKDGDTGSIGFLEIVV*KTQVNQ Trigger: TTGATTCACTTGAGTCTTGCAAACAACAATCTCCAG...AAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CCA 90 bp | GATGGTGTGAATAAGAAACTCCCTTCTGAGATTTCAGTAAAACCAGATCTCACAAGGAGGAACGGTGCGTaGAATGGATCTCGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DGVNKKLPSEISVKPDLTRRNGA*NGSRIL Trigger: GAGAATGCGAGATCCATTCCACGCACCGTTCCTCCT...TGTGAGATCTGGTTTTACTGAAATCTCAGAAGGGAGTTTCTTATTCACACCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000197123.2 |
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| CDS-3UTR CCA 90 bp | GAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGTTTCTTATATTCCGGTaGGCCTTCACAGTAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESSCIEFIQVTHCRKFPMFLIFR*AFTVDV Trigger: GACATCTACTGTGAAGGCCCACCGGAATATAAGAAA...CATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| 3UTR CAA 72 bp | CCACTTTATTATTCTCATAGAGTCCGGGTCACAAATTaGGGCAGGGATATTGTGGATGGCTTGCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYYSHRVRVTN*GRDIVDGLLLF Trigger: AAAGAGCAGCAAGCCATCCACAATATCCCTGCCCAAATTTGTGACCCGGACTCTATGAGAATAATAAAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| 3UTR CAA 72 bp | CCAGACCCAGTTATCTGTGGCCAGAAGGGGCTAGAGTaGAAACTCAGTTGGATCTTAAATGATTTTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PDPVICGQKGLE*KLSWILNDFLF Trigger: GAAGAGAAAATCATTTAAGATCCAACTGAGTTTCAACTCTAGCCCCTTCTGGCCACAGATAACTGGGTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| CDS-3UTR TCA 90 bp | AAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTATTTCCAGTAAAAGGCTaGGCAATGACTACATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGNFPHHWTGQLRMVILVFPVKG*AMTTYS Trigger: TGAATATGTAGTCATTGCTCAGCCTTTTACTGGAAA...TACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR TCA 90 bp | GGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTCTGGACAGGATTAAATaGGGTGTTCTGAGGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GDTGSIGFSSLSVERYSSLDRIK*GVLRAN Trigger: ATTGGCCCTCAGAACACCTCATTTAATCCTGTCCAG...AGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR TCA 90 bp | CAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAACTGGACAGGATTAAATaGGGTGTTCTGAGGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLRMVILVVLALAVSVLKLDRIK*GVLRAN Trigger: ATTGGCCCTCAGAACACCTCATTTAATCCTGTCCAG...TTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | TCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCACGCTTAAGTCAACTATaGCATGTTTGTAAATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSCIEFIQVTHCRKFPMARLSQL*HVCKSA Trigger: CGCAGATTTACAAACATGTCATAGTTGACTTAAGCG...TGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTACCGGAAAGTATGTCTTaGAATGGACTTGATATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGNFPHHWTGQLRMVILVPESMS*NGLDIV Trigger: AACAATATCAAGTCCATTTCAAGACATACTTTCCGG...TACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTTCATTATGCTGTACCATCCTCCTTCAGTGGATGCTCCTGTACATGGATAAAGCGTTATCTTTaGTACAAGTACACACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFFHYAVPSSFSGCSCTWIKRYL*YKYTRQ Trigger: CTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTAT...CCATGTACAGGAGCATCCACTGAAGGAGGATGGTACAGCATAATGAAAGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR GCA 90 bp | CTTTTCGGAGTAACAGATGCCATTAAACGCTTATTTACACATCTTCACTGCAAACATCAGGAGGAACGGTaGGTGGAATGGATCTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFGVTDAIKRLFTHLHCKHQEER*VEWISH Trigger: ATGCGAGATCCATTCCACGCACCGTTCCTCCTGATG...TTTGCAGTGAAGATGTGTAAATAAGCGTTTAATGGCATCTGTTACTCCGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | GATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAGAACGGTGCGTGGAATaGATCTCGCATTCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: DTGSIGFSSLSVERYSSAERCVE*ISHSHI Trigger: TATGTGAGAATGCGAGATCCATTCCACGCACCGTTC...TGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | ATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAACTTCCACAGTTGCATTaGTATGGCCGAGCCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILVVLALAVSVLKGIHLQLPQLH*YGRAIP Trigger: TGGAATGGCTCGGCCATACCAATGCAACTGTGGAAG...TTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CAA 72 bp | TGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATaGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WTGQLRMVILVV*ALAVSVLKGIH Trigger: ATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CAA 72 bp | AGGCCTCAGACTCTGGGTCTTGATGATTTTTCTCAATaGTGTGTTTTCATCTTTGGGAGTAGGTGTAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPQTLGLDDFSQ*CVFIFGSRCKC Trigger: GCACTTACACCTACTCCCAAAGATGAAAACACACAATTGAGAAAAATCATCAAGACCCAGAGTCTGAGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGTTTCCAGTAAAAGGCTaGGCAATGACTACATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKGNFPHHWTGQLRMVILFPVKG*AMTTYS Trigger: TGAATATGTAGTCATTGCTCAGCCTTTTACTGGAAA...CAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR GCA 90 bp | CTCAAGAGCTGCAGCGATGGTGTGAATAAGAAACTCCCTTCTGAGATTTCAGTAATAAAGCGTTATCTTTaGTACAAGTACACACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKSCSDGVNKKLPSEISVIKRYL*YKYTRQ Trigger: CTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTAT...TACTGAAATCTCAGAAGGGAGTTTCTTATTCACACCATCGCTGCAGCTCTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197123.2 |
||
| CDS-3UTR GCA 90 bp | CTTATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATAATAAAGCGTTATCTTTaGTACAAGTACACACGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIKGNFPHHWTGQLRMVIIKRYL*YKYTRQ Trigger: CTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTAT...TATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGAAATTTGGCTTTCTCTaGATCCCAGTTATACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKGNFPHHWTGQLRMVILKFGFL*IPVIHL Trigger: CAAGTGTATAACTGGGATGCAGAGAAAGCCAAATTT...CAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | GATGGTGTGAATAAGAAACTCCCTTCTGAGATTTCAGTAAAACCAGATCTCACAGAACGGTGCGTGGAATaGATCTCGCATTCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: DGVNKKLPSEISVKPDLTERCVE*ISHSHI Trigger: TATGTGAGAATGCGAGATCCATTCCACGCACCGTTC...TGTGAGATCTGGTTTTACTGAAATCTCAGAAGGGAGTTTCTTATTCACACCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000197123.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGAACGGTGCGTGGAATaGATCTCGCATTCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: ILVVLALAVSVLKGIHLQERCVE*ISHSHI Trigger: TATGTGAGAATGCGAGATCCATTCCACGCACCGTTC...TTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | GAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGAAGAAAAAGTGTCTATaGACAGCGACTGATAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESSCIEFIQVTHCRKFPMKKKCL*TATDKV Trigger: TACCTTATCAGTCGCTGTCCATAGACACTTTTTCTT...CATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | TTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTAAGGTCTTCTCTACGTaGTCCCATTCCAGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LRMVILVVLALAVSVLKGKVFST*SHSRKM Trigger: CATTTTCCTGGAATGGGACCACGTAGAGAAGACCTT...ACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTTTCATTATGCTGTACCATCCTCCTTCAGTGGATGCTCCTGTACATGGTTAGGAATGTCGGTTTaGTTAGTGAATAGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFFHYAVPSSFSGCSCTWLGMSV*LVNSCV Trigger: AACACAGCTATTCACTAACCAAACCGACATTCCTAA...CCATGTACAGGAGCATCCACTGAAGGAGGATGGTACAGCATAATGAAAGAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| 3UTR CAA 72 bp | TGTGGTTCCACGGTGCAGAGACTGTTCTCCAAAGAATaGTTTAGAGAGATTGCCATTGTACACATTTATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGSTVQRLFSKE*FREIAIVHIYA Trigger: TGCATAAATGTGTACAATGGCAATCTCTCTAAACAATTCTTTGGAGAACAGTCTCTGCACCGTGGAACCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | CTTATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATAAGTTGTCTTCAATCTTaGATGTTTCGATGTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIKGNFPHHWTGQLRMVISCLQS*MFRCHW Trigger: CCAATGACATCGAAACATTCAAGATTGAAGACAACT...TATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR GCA 90 bp | CGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTAAATTTGGCTTTCTCTaGATCCCAGTTATACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTVKDGDTGSIGFSSLSVKFGFL*IPVIHL Trigger: CAAGTGTATAACTGGGATGCAGAGAAAGCCAAATTT...AACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGGAGTAACAGATGCCATTAAACGCTTATTTACACATCTTCACTGCAAAGAACGGTGCGTGGAATaGATCTCGCATTCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: LFGVTDAIKRLFTHLHCKERCVE*ISHSHI Trigger: TATGTGAGAATGCGAGATCCATTCCACGCACCGTTC...TTTGCAGTGAAGATGTGTAAATAAGCGTTTAATGGCATCTGTTACTCCGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | AAGAAGAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCGAAACTTCACAAATTTaGCTTTCTCTGCATCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKSHHALSSSRSRTVESFETSQI*LSLHPS Trigger: ACTGGGATGCAGAGAAAGCCAAATTTGTGAAGTTTC...GAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTCTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR TCA 90 bp | GGAGTTCATGGTTTTTATGACTTAGCGTGGAAGCCAAACTATCACTTTCACCAACGCTTAAGTCAACTATaGCATGTTTGTAAATCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GVHGFYDLAWKPNYHFHQRLSQL*HVCKSA Trigger: CGCAGATTTACAAACATGTCATAGTTGACTTAAGCG...TTGGTGAAAGTGATAGTTTGGCTTCCACGCTAAGTCATAAAAACCATGAACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR GCA 90 bp | AAGAAGAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCTGGAGATTGTTGTTTaGAAGACTCAAGTGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KKSHHALSSSRSRTVESFLEIVV*KTQVNQ Trigger: TTGATTCACTTGAGTCTTGCAAACAACAATCTCCAG...GAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTCTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGTTCTTTTGGGAGTGTCTaGAGATTGTTGTTTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGSIGFSSLSVERYSSASSFGSV*RLLFAR Trigger: TCTTGCAAACAACAATCTCCAGACACTCCCAAAAGA...ACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CAA 72 bp | CTGTCAGCGACAACGAAGTACCAGTTGTCTTCAATCTaGAATGTTTCGATGTCATTGGGTTTTCGAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSATTKYQLSSI*NVSMSLGFRIL Trigger: CAAAATTCGAAAACCCAATGACATCGAAACATTCAAGATTGAAGACAACTGGTACTTCGTTGTCGCTGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| 3UTR CAA 72 bp | CAGTGCTCGGTACAAGGTAAGAACACCGAAATGGCGTaGAGTAGAAGTAGTTATCCTTTAAAAGGTATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QCSVQGKNTEMA*SRSSYPLKGIV Trigger: TACTATACCTTTTAAAGGATAACTACTTCTACTCAACGCCATTTCGGTGTTCTTACCTTGTACCGAGCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | GGAGTTCATGGTTTTTATGACTTAGCGTGGAAGCCAAACTATCACTTTCACCAATTTCCAGTAAAAGGCTaGGCAATGACTACATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVHGFYDLAWKPNYHFHQFPVKG*AMTTYS Trigger: TGAATATGTAGTCATTGCTCAGCCTTTTACTGGAAA...TTGGTGAAAGTGATAGTTTGGCTTCCACGCTAAGTCATAAAAACCATGAACTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR TCA 90 bp | GGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTCCGGAAAGTATGTCTTaGAATGGACTTGATATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GDTGSIGFSSLSVERYSSPESMS*NGLDIV Trigger: AACAATATCAAGTCCATTTCAAGACATACTTTCCGG...AGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR GCA 90 bp | GATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCACTGGAGATTGTTGTTTaGAAGACTCAAGTGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: DTGSIGFSSLSVERYSSALEIVV*KTQVNQ Trigger: TTGATTCACTTGAGTCTTGCAAACAACAATCTCCAG...TGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | TTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGTGTGATAAGAAGAGTCTCTTTTGGGAGTGTCTaGAGATTGTTGTTTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSSLSVERYSSASVIRRVSFGSV*RLLFAR Trigger: TCTTGCAAACAACAATCTCCAGACACTCCCAAAAGA...GACTCTTCTTATCACACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | TTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTTTAGGAATGTCGGTTTaGTTAGTGAATAGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRMVILVVLALAVSVLKGLGMSV*LVNSCV Trigger: AACACAGCTATTCACTAACCAAACCGACATTCCTAA...ACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGGAGTAACAGATGCCATTAAACGCTTATTTACACATCTTCACTGCAAAAAGAAAAAGTGTCTATaGACAGCGACTGATAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFGVTDAIKRLFTHLHCKKKKCL*TATDKV Trigger: TACCTTATCAGTCGCTGTCCATAGACACTTTTTCTT...TTTGCAGTGAAGATGTGTAAATAAGCGTTTAATGGCATCTGTTACTCCGAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| 3UTR CAA 72 bp | TACCAGTTGTCTTCAATCTTGAATGTTTCGATGTCATaGGGTTTTCGAATTTTGAGAACTTCAATATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YQLSSILNVSMS*GFRILRTSISW Trigger: CCAAGATATTGAAGTTCTCAAAATTCGAAAACCCAATGACATCGAAACATTCAAGATTGAAGACAACTGGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087252.12 |
||
| CDS-3UTR CAA 90 bp | CCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGATGTCTTCCACAGTaGCATTGGTATGGCCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTPLDRTVKDGDTGSIGFRCLPQ*HWYGRA Trigger: GGCTCGGCCATACCAATGCAACTGTGGAAGACATCT...AAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | TTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGCCGTGGAGTGGGAGTGTCTGGAGATaGTTGTTTGCAAGACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSRSRTVESFRWQPWSGSVWR*LFARLK Trigger: CTTGAGTCTTGCAAACAACAATCTCCAGACACTCCC...ACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | CCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTGTAGTAAACCCAGCTTaGGAACTGTCAGCGACAACG | + |
|
Preference number: 5 (lower is better) Translates to: PTPLDRTVKDGDTGSIGFVVNPA*ELSATT Trigger: CGTTGTCGCTGACAGTTCCAAAGCTGGGTTTACTAC...AAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | AGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGAGATGTCTTCCACAGTaGCATTGGTATGGCCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SHHALSSSRSRTVESFRWRCLPQ*HWYGRA Trigger: GGCTCGGCCATACCAATGCAACTGTGGAAGACATCT...CCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | CACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTAGTAAACCCAGCTTaGGAACTGTCAGCGACAACG | + |
|
Preference number: 5 (lower is better) Translates to: HHWTGQLRMVILVVLALAVVNPA*ELSATT Trigger: CGTTGTCGCTGACAGTTCCAAAGCTGGGTTTACTAC...TGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | CTACCTCTTAGTGAATTTTGGACAAGGTCTCACAGGCGTGGGGGTTCAAGGTGCCATAAAGCGTTATCTTaGCTACAAGTACACACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPLSEFWTRSHRRGGSRCHKALS*LQVHTA Trigger: TGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATG...GCACCTTGAACCCCCACGCCTGTGAGACCTTGTCCAAAATTCACTAAGAGGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087252.12 ENSMUST00000198518.5 |
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| CDS-3UTR CAA 90 bp | TTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGGCAGCCGTGGAGTCATAAAGCGTTATCTTaGCTACAAGTACACACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSSRSRTVESFRWQPWSHKALS*LQVHTA Trigger: TGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATG...ACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | CACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGGGAGTGTCTGGAGATaGTTGTTTGCAAGACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HHWTGQLRMVILVVLALAGSVWR*LFARLK Trigger: CTTGAGTCTTGCAAACAACAATCTCCAGACACTCCC...TGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | TTGGGAGTGTCTGGAGATTGTTGTTTGCAAGACTCAAGAGCTGCAGCGATGGTGCATAAAGCGTTATCTTaGCTACAAGTACACACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGVSGDCCLQDSRAAAMVHKALS*LQVHTA Trigger: TGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATG...CACCATCGCTGCAGCTCTTGAGTCTTGCAAACAACAATCTCCAGACACTCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197123.2 |
||
| CDS-3UTR CAA 90 bp | CCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTCATAAAGCGTTATCTTaGCTACAAGTACACACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTPLDRTVKDGDTGSIGFHKALS*LQVHTA Trigger: TGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATG...AAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | AAAGCTCTCCATAGAGGCAGCACACATAACCAGTTTGTGCCCGCAATGTCTTCCTCTGGAGATTGTTGTTaGCAAGACTCAAGTGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: KALHRGSTHNQFVPAMSSSGDCC*QDSSES Trigger: TGATTCACTTGAGTCTTGCAAACAACAATCTCCAGA...GGAAGACATTGCGGGCACAAACTGGTTATGTGTGCTGCCTCTATGGAGAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CAA 90 bp | ATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTGAAGGAATCCAGGCCTTaGAAAATGTCTTTTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IKGNFPHHWTGQLRMVILKESRP*KMSFGS Trigger: ACTCCCAAAAGACATTTTCAAAGGCCTGGATTCCTT...CAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | CTTATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGGTGATACTCTTAGGTCCACATTaGTTAAGGAATCCAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIKGNFPHHWTGQLRMVILLGPH*LRNPGL Trigger: AAGGCCTGGATTCCTTAACAAATGTGGACCTAAGAG...TATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | ATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAAGATGTCTTCCACAGTaGCATTGGTATGGCCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILVVLALAVSVLKGIHLQRCLPQ*HWYGRA Trigger: GGCTCGGCCATACCAATGCAACTGTGGAAGACATCT...TTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | ATCGTTAACGTCTCTGCTCTTGGTGCTGAGGGGCACAATGGGAGTTCTTATGTGACAACGAAGTACCAGTaGTCTTCAATCTTGAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: IVNVSALGAEGHNGSSYVTTKYQ*SSILNV Trigger: AACATTCAAGATTGAAGACAACTGGTACTTCGTTGT...CACATAAGAACTCCCATTGTGCCCCTCAGCACCAAGAGCAGAGACGTTAACGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
||
| CDS-3UTR CAA 90 bp | TTTTGTCTTATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGCTCTTAGGTCCACATTaGTTAAGGAATCCAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FCLIKGNFPHHWTGQLRMLLGPH*LRNPGL Trigger: AAGGCCTGGATTCCTTAACAAATGTGGACCTAAGAG...CATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTATAAGACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCATTTATCTGAAGAGGTaGGAACACCATGGATCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KKSHHALSSSRSRTVESFIYLKR*EHHGSS Trigger: CGAGGATCCATGGTGTTCCAACCTCTTCAGATAAAT...GAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | GAGTCATCATGCATTGAGTTCATCCAGGTCACGCACTGTAGAAAGTTTCCGATGATCCCAGTTATACACTaGAGTAAAGGAGTAATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESSCIEFIQVTHCRKFPMIPVIH*SKGVIA Trigger: AGCGATTACTCCTTTACTCAAGTGTATAACTGGGAT...CATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | ATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGGGAGTGTCTGGAGATaGTTGTTTGCAAGACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILVVLALAVSVLKGIHLQGSVWR*LFARLK Trigger: CTTGAGTCTTGCAAACAACAATCTCCAGACACTCCC...TTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | TTTTGTCTTATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGAAGGAATCCAGGCCTTaGAAAATGTCTTTTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FCLIKGNFPHHWTGQLRMKESRP*KMSFGS Trigger: ACTCCCAAAAGACATTTTCAAAGGCCTGGATTCCTT...CATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTATAAGACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | ACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGTCTCTTAGGTCCACATTaGTTAAGGAATCCAGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGSIGFSSLSVERYSSASLLGPH*LRNPGL Trigger: AAGGCCTGGATTCCTTAACAAATGTGGACCTAAGAG...ACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
||
| CDS-3UTR CAA 90 bp | GCATCTCACTTCTGCTTCTTTTCTATTTCAACCGGGATCCTGGTACATACACGGCAGTTGTCTTCAATCTaGAATGTTTCGATGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: ASHFCFFSISTGILVHTRQLSSI*NVSMSL Trigger: CAATGACATCGAAACATTCAAGATTGAAGACAACTG...CCGTGTATGTACCAGGATCCCGGTTGAAATAGAAAAGAAGCAGAAGTGAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198518.5 |
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| CDS-3UTR CAA 90 bp | GATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAATTTATCTGAAGAGGTaGGAACACCATGGATCCTCG | + |
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Preference number: 5 (lower is better) Translates to: DTGSIGFSSLSVERYSSAIYLKR*EHHGSS Trigger: CGAGGATCCATGGTGTTCCAACCTCTTCAGATAAAT...TGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | CAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAACATAAAGCGTTATCTTaGCTACAAGTACACACGGCA | + |
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Preference number: 5 (lower is better) Translates to: QLRMVILVVLALAVSVLKHKALS*LQVHTA Trigger: TGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATG...TTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087252.12 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | TTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTAAGGAATCCAGGCCTTaGAAAATGTCTTTTGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LRMVILVVLALAVSVLKGKESRP*KMSFGS Trigger: ACTCCCAAAAGACATTTTCAAAGGCCTGGATTCCTT...ACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | GGACAGTTAAGGATGGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGACAACGAAGTACCAGTaGTCTTCAATCTTGAATGTT | + |
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Preference number: 5 (lower is better) Translates to: GQLRMVILVVLALAVSVLTTKYQ*SSILNV Trigger: AACATTCAAGATTGAAGACAACTGGTACTTCGTTGT...CAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | TTTTGTCTTATAAAAGGTAACTTCCCACACCACTGGACCGGACAGTTAAGGATGATCCCAGTTATACACTaGAGTAAAGGAGTAATCGCT | + |
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Preference number: 5 (lower is better) Translates to: FCLIKGNFPHHWTGQLRMIPVIH*SKGVIA Trigger: AGCGATTACTCCTTTACTCAAGTGTATAACTGGGAT...CATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTATAAGACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | GGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTGCAAGTGTGCAGTTGTCTTCAATCTaGAATGTTTCGATGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: GSIGFSSLSVERYSSASVQLSSI*NVSMSL Trigger: CAATGACATCGAAACATTCAAGATTGAAGACAACTG...CACACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | GGTGATACTGGTAGTATTGGCTTTAGCAGTCTCAGTGTTGAAAGGTATTCATCTTCTGGAGATTGTTGTTaGCAAGACTCAAGTGAATCA | + |
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Preference number: 5 (lower is better) Translates to: GDTGSIGFSSLSVERYSSSGDCC*QDSSES Trigger: TGATTCACTTGAGTCTTGCAAACAACAATCTCCAGA...AGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS-3UTR CAA 90 bp | CTTTTCGGAGTAACAGATGCCATTAAACGCTTATTTACACATCTTCACTGCAAATCTGGAGATTGTTGTTaGCAAGACTCAAGTGAATCA | + |
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Preference number: 5 (lower is better) Translates to: LFGVTDAIKRLFTHLHCKSGDCC*QDSSES Trigger: TGATTCACTTGAGTCTTGCAAACAACAATCTCCAGA...TTTGCAGTGAAGATGTGTAAATAAGCGTTTAATGGCATCTGTTACTCCGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS CAA 90 bp | ACGGTGCGTGGAATGGATCTCGCATTCTCACATAAAGCGTTATCTTaGCTACAAGTACACACGGCAGGGCATTTTGGCTTCGCTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TVRGMDLAFSHKALS*LQVHTAGHFGFAGF Trigger: GAAACCAGCGAAGCCAAAATGCCCTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATGTGAGAATGCGAGATCCATTCCACGCACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087252.12 ENSMUST00000196090.2 ENSMUST00000197123.2 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS CAA 90 bp | CACATAAAGCGTTATCTTTGCTACAAGTACACACGGCAGGGCATTTaGGCTTCGCTGGTTTCTTCCCCTCAGTCAGCAAAACCACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: HIKRYLCYKYTRQGI*ASLVSSPQSAKPQK Trigger: TTTCTGTGGTTTTGCTGACTGAGGGGAAGAAACCAGCGAAGCCAAAATGCCCTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000087252.12 ENSMUST00000196090.2 ENSMUST00000197123.2 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS GCA 72 bp | GAATGGATCTCGCATTCTCACATAAAGCGTTATCTTTaGTACAAGTACACACGGCAGGGCATTTTGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: EWISHSHIKRYL*YKYTRQGILAS Trigger: CGAAGCCAAAATGCCCTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATGTGAGAATGCGAGATCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087252.12 ENSMUST00000196090.2 ENSMUST00000197123.2 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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| CDS CCA 72 bp | GAATCCAGGCCTTTGAAAATGTCTTTTGGGAGTGTCTaGAGATTGTTGTTTGCAAGACTCAAGAGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ESRPLKMSFGSV*RLLFARLKSCS Trigger: GCTGCAGCTCTTGAGTCTTGCAAACAACAATCTCCAGACACTCCCAAAAGACATTTTCAAAGGCCTGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196090.2 |
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| CDS CAA 72 bp | GGAATGGATCTCGCATTCTCACATAAAGCGTTATCTTaGCTACAAGTACACACGGCAGGGCATTTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GMDLAFSHKALS*LQVHTAGHFGF Trigger: GAAGCCAAAATGCCCTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATGTGAGAATGCGAGATCCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000087252.12 ENSMUST00000196090.2 ENSMUST00000197123.2 ENSMUST00000198045.5 ENSMUST00000198518.5 ENSMUST00000199812.5 |
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