Pregenerated sensors for LGALSL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042363Ensembl transcript IDs: ENSMUST00000047028.9
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCCACCCAGGATCCCTTTCTTCTCCCACTACCTGCCCAAAGCAATaGCAAAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACAC | + |
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Preference number: 1 (lower is better) Translates to: PHPGSLSSPTTCPKQ*QRPFSLGPTQGMKH Trigger: GTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTTTGGCATTGCTTTGGGCAGGTAGTGGGAGAAGAAAGGGATCCTGGGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 90 bp | TATATAAATACACCCCACCCAGGATCCCTTTCTTCTCCCACTACCTaGCCAAAGCAATGCCAAAGGCCCTTCTCTCTAGGACCAACGCAG | + |
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Preference number: 1 (lower is better) Translates to: YINTPHPGSLSSPTT*PKQCQRPFSLGPTQ Trigger: CTGCGTTGGTCCTAGAGAGAAGGGCCTTTGGCATTGCTTTGGGCAGGTAGTGGGAGAAGAAAGGGATCCTGGGTGGGGTGTATTTATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 90 bp | TCCACCAGGGAGGCAGCACTGTCTACTCAGAAGCTCCAAAGGCATTaGTTAGGGATACTGGGCAGGGTCTCAGAAGACAAAGTATACAAT | + |
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Preference number: 1 (lower is better) Translates to: STREAALSTQKLQRH*LGILGRVSEDKVYN Trigger: ATTGTATACTTTGTCTTCTGAGACCCTGCCCAGTATCCCTAAGCAATGCCTTTGGAGCTTCTGAGTAGACAGTGCTGCCTCCCTGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 90 bp | GGTTATTGCAAGACTAGGGCCCTGGGTGGACAGAACTCCTGTGTATaGAGTGCTTTCCCCATGAAGCTTGAAATTGCACTTTCCATCCTG | + |
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Preference number: 1 (lower is better) Translates to: GYCKTRALGGQNSCV*SAFPMKLEIALSIL Trigger: CAGGATGGAAAGTGCAATTTCAAGCTTCATGGGGAAAGCACTGCATACACAGGAGTTCTGTCCACCCAGGGCCCTAGTCTTGCAATAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CCA 90 bp | CTACTGGTGGTTCTGCAAGTGCAGGAAGCAGTTTCCCTGGAAGCATaGTCACTGTTGGCTGAGATCCTGGGACTTAATCTTTCAGATGAC | + |
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Preference number: 1 (lower is better) Translates to: LLVVLQVQEAVSLEA*SLLAEILGLNLSDD Trigger: GTCATCTGAAAGATTAAGTCCCAGGATCTCAGCCAACAGTGACCATGCTTCCAGGGAAACTGCTTCCTGCACTTGCAGAACCACCAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR TCA 90 bp | GGGTGGACAGAACTCCTGTGTATGCAGTGCTTTCCCCATGAAGCTTaGAATTGCACTTTCCATCCTGAATTCCCCACATTTGACCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: GWTELLCMQCFPHEA*NCTFHPEFPTFDLS Trigger: TGAGAGGTCAAATGTGGGGAATTCAGGATGGAAAGTGCAATTTCAAGCTTCATGGGGAAAGCACTGCATACACAGGAGTTCTGTCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR TCA 90 bp | ACCTTTGCTGCAGATTGTCTAAAGCCTGCTTATTGCCCCAGAGCCTaGTTGTTATCCCTTGGTTTTGGTTATTGCAAGACTAGGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: TFAADCLKPAYCPRA*LLSLGFGYCKTRAL Trigger: CAGGGCCCTAGTCTTGCAATAACCAAAACCAAGGGATAACAATCAGGCTCTGGGGCAATAAGCAGGCTTTAGACAATCTGCAGCAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTAAGCTCCAAAGGCATTaGTTAGGGATACTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PKALLSRTNAGYETPSISKLQRH*LGILGR Trigger: CCTGCCCAGTATCCCTAAGCAATGCCTTTGGAGCTT...AGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTGTTTCCCTGGAAGCATaGTCACTGTTGGCTGAGATC | + |
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Preference number: 2 (lower is better) Translates to: PKALLSRTNAGYETPSISVSLEA*SLLAEI Trigger: GATCTCAGCCAACAGTGACCATGCTTCCAGGGAAAC...AGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 90 bp | ATCCACCAGGGAGGCAGCACTGTCTACTCAGAAGCTCCAAAGGCATaGCTTAGGGATACTGGGCAGGGTCTCAGAAGACAAAGTATACAA | + |
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Preference number: 2 (lower is better) Translates to: IHQGGSTVYSEAPKA*LRDTGQGLRRQSIQ Trigger: TTGTATACTTTGTCTTCTGAGACCCTGCCCAGTATCCCTAAGCAATGCCTTTGGAGCTTCTGAGTAGACAGTGCTGCCTCCCTGGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 90 bp | GTTCTGCAAGTGCAGGAAGCAGTTTCCCTGGAAGCATGGTCACTGTaGGCTGAGATCCTGGGACTTAATCTTTCAGATGACCTAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLQVQEAVSLEAWSL*AEILGLNLSDDLAG Trigger: TCCAGCTAGGTCATCTGAAAGATTAAGTCCCAGGATCTCAGCCAACAGTGACCATGCTTCCAGGGAAACTGCTTCCTGCACTTGCAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCACCTTTGCTGCAGATTGTCTAAAGCCTGCTTATTGCCCCAGAGCCTGGCTCAGTGTCTTTCTTaGGAGTTTTCTTCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: FLHLCCRLSKACLLPQSLAQCLS*EFSSSG Trigger: CCCAGAAGAAGAAAACTCGCAAGAAAGACACTGAGC...CAGGCTCTGGGGCAATAAGCAGGCTTTAGACAATCTGCAGCAAAGGTGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTCACAGAAAGAGACAGTaGAGTCTGTCTTTGTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PKALLSRTNAGYETPSISHRKRQ*SLSLFL Trigger: CAAAAACAAAGACAGACTTCACTGTCTCTTTCTGTG...AGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR GCA 90 bp | AACATGGTAGATAGACACATTTCCTCCACCTTTGCTGCAGATTGTCTAAAGCCTAACAGCTCTCCTGGCTaGCTGAGAAGCCATGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: NMVDRHISSTFAADCLKPNSSPG*LRSHEN Trigger: GTTCTCATGGCTTCTCAGGCAGCCAGGAGAGCTGTT...AGGCTTTAGACAATCTGCAGCAAAGGTGGAGGAAATGTGTCTATCTACCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCCACCTTTGCTGCAGATTGTCTAAAGCCTGCTTATTGCCCCAGAGCCTGTTAAGTCTCCAGATCTaGTTAGGACACTTCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLHLCCRLSKACLLPQSLLSLQI*LGHFFQ Trigger: CTGAAAGAAGTGTCCTAACCAGATCTGGAGACTTAA...CAGGCTCTGGGGCAATAAGCAGGCTTTAGACAATCTGCAGCAAAGGTGGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR GCA 90 bp | AACATGGTAGATAGACACATTTCCTCCACCTTTGCTGCAGATTGTCTAAAGCCTGCCTACTGGTGGTTCTaGAAGTGCAGGAAGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: NMVDRHISSTFAADCLKPAYWWF*KCRKQF Trigger: AAACTGCTTCCTGCACTTGCAGAACCACCAGTAGGC...AGGCTTTAGACAATCTGCAGCAAAGGTGGAGGAAATGTGTCTATCTACCATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGTCTTGGTGGACAAGGCTTTGAATATAACACCATGGAACTGTGCTAAAAAGCATGGTCACTGTTaGCTGAGATCCTGGGACTTA | + |
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Preference number: 2 (lower is better) Translates to: QQVLVDKALNITPWNCAKKHGHC*LRSWDL Trigger: TAAGTCCCAGGATCTCAGCCAACAGTGACCATGCTT...TTTAGCACAGTTCCATGGTGTTATATTCAAAGCCTTGTCCACCAAGACCTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 90 bp | ACACATTTCCTCCACCTTTGCTGCAGATTGTCTAAAGCCTGCTTATaGCCCCAGAGCCTGATTGTTATCCCTTGGTTTTGGTTATTGCAA | + |
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Preference number: 2 (lower is better) Translates to: THFLHLCCRLSKACL*PQSLIVIPWFWLLQ Trigger: TTGCAATAACCAAAACCAAGGGATAACAATCAGGCTCTGGGGCAATAAGCAGGCTTTAGACAATCTGCAGCAAAGGTGGAGGAAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGGCTGAGATCCTGGGACTTAATCTTTCAGATGACCTAGCTGGATCCCACGCTAACAGCCTAGGTTaGTATAAATTACTTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LLAEILGLNLSDDLAGSHANSLG*YKLLLS Trigger: ACTGAGAAGTAATTTATATCAACCTAGGCTGTTAGC...GTGGGATCCAGCTAGGTCATCTGAAAGATTAAGTCCCAGGATCTCAGCCAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR TCA 90 bp | GAACATTATCTTTACATTAATGCTGGAAAATGCCAAAGCTGTTTTCTCAAGGCAACCCCAAGCTTCTGCTaGGTTACACATGCTTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: EHYLYINAGKCQSCFLKATPSFC*VTHACP Trigger: TGGGCAAGCATGTGTAACTCAGCAGAAGCTTGGGGT...TGCCTTGAGAAAACAGCTTTGGCATTTTCCAGCATTAATGTAAAGATAATGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 90 bp | GCTTTGTTTATCTTAGACTTTGGTTCTGAAACACTGTCTACATTCTaGACACATGAAGATGACATGGTCACTTCAGTGCCTCTGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: ALFILDFGSETLSTF*THEDDMVTSVPLHV Trigger: AACATGCAGAGGCACTGAAGTGACCATGTCATCTTCATGTGTCAAGAATGTAGACAGTGTTTCAGAACCAAAGTCTAAGATAAACAAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR GCA 90 bp | GAACATTATCTTTACATTAATGCTGGAAAATGCCAAAGCTGTTTTCTCAAGGCAAGACAATTCTGGGATTaGCCAGGAAGTAGAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: EHYLYINAGKCQSCFLKARQFWD*PGSRSH Trigger: ATGACTTCTACTTCCTGGGCAATCCCAGAATTGTCT...TGCCTTGAGAAAACAGCTTTGGCATTTTCCAGCATTAATGTAAAGATAATGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR GCA 90 bp | GAACATTATCTTTACATTAATGCTGGAAAATGCCAAAGCTGTTTTCTCAAGGCAACTCTGGACTTAAACTaGACAGAAAGAGACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: EHYLYINAGKCQSCFLKATLDLN*TERDSE Trigger: TTCACTGTCTCTTTCTGTGCAGTTTAAGTCCAGAGT...TGCCTTGAGAAAACAGCTTTGGCATTTTCCAGCATTAATGTAAAGATAATGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 72 bp | GGATCCCTTTCTTCTCCCACTACCTGCCCAAAGCAATaGCAAAGGCCCTTCTCTCTAGGACCAACGCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: GSLSSPTTCPKQ*QRPFSLGPTQG Trigger: ACCCTGCGTTGGTCCTAGAGAGAAGGGCCTTTGGCATTGCTTTGGGCAGGTAGTGGGAGAAGAAAGGGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 72 bp | ACACCCCACCCAGGATCCCTTTCTTCTCCCACTACCTaGCCAAAGCAATGCCAAAGGCCCTTCTCTCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: TPHPGSLSSPTT*PKQCQRPFSLG Trigger: TCCTAGAGAGAAGGGCCTTTGGCATTGCTTTGGGCAGGTAGTGGGAGAAGAAAGGGATCCTGGGTGGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CCA 72 bp | TACTGGTGGTTCTGCAAGTGCAGGAAGCAGTTTCCCTaGAAGCATGGTCACTGTTGGCTGAGATCCTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: YWWFCKCRKQFP*KHGHCWLRSWD Trigger: GTCCCAGGATCTCAGCCAACAGTGACCATGCTTCCAGGGAAACTGCTTCCTGCACTTGCAGAACCACCAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 72 bp | CCGAGCATCTCTAACCTTGCAGATACGTTAGTCACCTaGAGCCTACTGGTGGTTCTGCAAGTGCAGGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: PSISNLADTLVT*SLLVVLQVQEA Trigger: TGCTTCCTGCACTTGCAGAACCACCAGTAGGCTGCAGGTGACTAACGTATCTGCAAGGTTAGAGATGCTCGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 72 bp | GAGGCAGCACTGTCTACTCAGAAGCTCCAAAGGCATTaGTTAGGGATACTGGGCAGGGTCTCAGAAGACAAA | + |
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Preference number: 3 (lower is better) Translates to: EAALSTQKLQRH*LGILGRVSEDK Trigger: TTTGTCTTCTGAGACCCTGCCCAGTATCCCTAAGCAATGCCTTTGGAGCTTCTGAGTAGACAGTGCTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 72 bp | AAGACTAGGGCCCTGGGTGGACAGAACTCCTGTGTATaGAGTGCTTTCCCCATGAAGCTTGAAATTGCACTT | + |
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Preference number: 3 (lower is better) Translates to: KTRALGGQNSCV*SAFPMKLEIAL Trigger: AAGTGCAATTTCAAGCTTCATGGGGAAAGCACTGCATACACAGGAGTTCTGTCCACCCAGGGCCCTAGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CCA 72 bp | TGCAGGAAGCAGTTTCCCTGGAAGCATGGTCACTGTTaGCTGAGATCCTGGGACTTAATCTTTCAGATGACC | + |
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Preference number: 3 (lower is better) Translates to: CRKQFPWKHGHC*LRSWDLIFQMT Trigger: GGTCATCTGAAAGATTAAGTCCCAGGATCTCAGCCAACAGTGACCATGCTTCCAGGGAAACTGCTTCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CCA 72 bp | GTTCTGCAAGTGCAGGAAGCAGTTTCCCTGGAAGCATaGTCACTGTTGGCTGAGATCCTGGGACTTAATCTT | + |
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Preference number: 3 (lower is better) Translates to: VLQVQEAVSLEA*SLLAEILGLNL Trigger: AAGATTAAGTCCCAGGATCTCAGCCAACAGTGACCATGCTTCCAGGGAAACTGCTTCCTGCACTTGCAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CCA 72 bp | TATCCCTTGGTTTTGGTTATTGCAAGACTAGGGCCCTaGGTGGACAGAACTCCTGTGTATGCAGTGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: YPLVLVIARLGP*VDRTPVYAVLS Trigger: GGAAAGCACTGCATACACAGGAGTTCTGTCCACCCAGGGCCCTAGTCTTGCAATAACCAAAACCAAGGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR TCA 72 bp | TCCAATCTTTTATACTCCCGTACCCCAAGCTTCTGCTaGGTTACACATGCTTGCCCACTCAGAAGATCCCTC | + |
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Preference number: 3 (lower is better) Translates to: SNLLYSRTPSFC*VTHACPLRRSL Trigger: GAGGGATCTTCTGAGTGGGCAAGCATGTGTAACTCAGCAGAAGCTTGGGGTACGGGAGTATAAAAGATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 72 bp | CATTTCCTCCACCTTTGCTGCAGATTGTCTAAAGCCTaGTTATTGCCCCAGAGCCTGATTGTTATCCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: HFLHLCCRLSKA*LLPQSLIVIPW Trigger: CCAAGGGATAACAATCAGGCTCTGGGGCAATAAGCAGGCTTTAGACAATCTGCAGCAAAGGTGGAGGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR CAA 90 bp | TTCCTCCACCTTTGCTGCAGATTGTCTAAAGCCTGCTTATTGCCCCAGAGCCTGTGTTATCCCTTGGTTTaGGTTATTGCAAGACTAGGG | + |
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Preference number: 3 (lower is better) Translates to: FLHLCCRLSKACLLPQSLCYPLV*VIARLG Trigger: CCCTAGTCTTGCAATAACCAAAACCAAGGGATAACA...CAGGCTCTGGGGCAATAAGCAGGCTTTAGACAATCTGCAGCAAAGGTGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTTGGCTGAGATCCTGGGACTTAATCTTTCAGATGACCTAGCTGGATCCCACTTCTCAGTAAGTAATTaGGGGCAACTTGCTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: LLAEILGLNLSDDLAGSHFSVSN*GQLASA Trigger: AGCAGAAGCAAGTTGCCCCAAATTACTTACTGAGAA...GTGGGATCCAGCTAGGTCATCTGAAAGATTAAGTCCCAGGATCTCAGCCAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR TCA 72 bp | TTCTTGCGAGTTTTCTTCTTCTGGGCAAACCACAGATaGGGTTGTCACTCTGGACTTAAACTGCACAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: FLRVFFFWANHR*GCHSGLKLHRK Trigger: CTTTCTGTGCAGTTTAAGTCCAGAGTGACAACCTCATCTGTGGTTTGCCCAGAAGAAGAAAACTCGCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR TCA 72 bp | GAACTCCTGTGTATGCAGTGCTTTCCCCATGAAGCTTaGAATTGCACTTTCCATCCTGAATTCCCCACATTT | + |
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Preference number: 3 (lower is better) Translates to: ELLCMQCFPHEA*NCTFHPEFPTF Trigger: AAATGTGGGGAATTCAGGATGGAAAGTGCAATTTCAAGCTTCATGGGGAAAGCACTGCATACACAGGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 72 bp | CTAAAATGTCGGTTGTGCTACGCAATTCCACGTCAGTaGAGATTTGATGTACCGCTGTTGTTTTTAAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LKCRLCYAIPRQ*RFDVPLLFLRS Trigger: AGACCTTAAAAACAACAGCGGTACATCAAATCTGCACTGACGTGGAATTGCGTAGCACAACCGACATTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR GCA 72 bp | CAAACCACAGATGAGGTTGTCACTCTGGACTTAAACTaGACAGAAAGAGACAGTGAAGTCTGTCTTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: QTTDEVVTLDLN*TERDSEVCLCF Trigger: AAAACAAAGACAGACTTCACTGTCTCTTTCTGTGCAGTTTAAGTCCAGAGTGACAACCTCATCTGTGGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR CAA 90 bp | AACATGGTAGATAGACACATTTCCTCCACCTTTGCTGCAGATTGTCTAAAGCCTCCTGATTGTTATCCCTaGGTTTTGGTTATTGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: NMVDRHISSTFAADCLKPPDCYP*VLVIAR Trigger: TCTTGCAATAACCAAAACCAAGGGATAACAATCAGG...AGGCTTTAGACAATCTGCAGCAAAGGTGGAGGAAATGTGTCTATCTACCATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR-3UTR CAA 90 bp | GAACATTATCTTTACATTAATGCTGGAAAATGCCAAAGCTGTTTTCTCAAGGCAGGCTCAGTGTCTTTCTaGCGAGTTTTCTTCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: EHYLYINAGKCQSCFLKAGSVSF*RVFFFW Trigger: CCAGAAGAAGAAAACTCGCAAGAAAGACACTGAGCC...TGCCTTGAGAAAACAGCTTTGGCATTTTCCAGCATTAATGTAAAGATAATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 72 bp | GGAGGCAGCACTGTCTACTCAGAAGCTCCAAAGGCATaGCTTAGGGATACTGGGCAGGGTCTCAGAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: GGSTVYSEAPKA*LRDTGQGLRRQ Trigger: TTGTCTTCTGAGACCCTGCCCAGTATCCCTAAGCAATGCCTTTGGAGCTTCTGAGTAGACAGTGCTGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR TCA 90 bp | TGCAAGACTAGGGCCCTGGGTGGACAGAACTCCTGTGTATGCAGTGCTTTCCCCTCTGGAGGTCCCCATTaGTCTTTATGGTGTCAATTG | + |
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Preference number: 4 (lower is better) Translates to: CKTRALGGQNSCVCSAFPSGGPH*SLWCQL Trigger: CAATTGACACCATAAAGATCAATGGGGACCTCCAGA...GGGGAAAGCACTGCATACACAGGAGTTCTGTCCACCCAGGGCCCTAGTCTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CCA 90 bp | TGCAGATACGTTAGTCACCTGCAGCCTACTGGTGGTTCTGCAAGTGCAGGAAGCCCTGAACGGCTGGTCTaGGATGAATGGAAAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: CRYVSHLQPTGGSASAGSPERLV*DEWKVR Trigger: CCTTACTTTCCATTCATCCCAGACCAGCCGTTCAGG...GCTTCCTGCACTTGCAGAACCACCAGTAGGCTGCAGGTGACTAACGTATCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CCA 90 bp | AAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTAACTCCACCCTGAACGGCTaGTCTGGGATGAATGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KALLSRTNAGYETPSISNSTLNG*SGMNGK Trigger: CTTTCCATTCATCCCAGACCAGCCGTTCAGGGTGGA...GTTAGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CCA 90 bp | AAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTAACCACGTCGGCTTGAACTaGAGAACCCAAGGAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: KALLSRTNAGYETPSISNHVGLN*RTQGVV Trigger: AACAACTCCTTGGGTTCTCCAGTTCAAGCCGACGTG...GTTAGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 72 bp | AGCCTGCTTATTGCCCCAGAGCCTGATTGTTATCCCTaGGTTTTGGTTATTGCAAGACTAGGGCCCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLLIAPEPDCYP*VLVIARLGPWV Trigger: CACCCAGGGCCCTAGTCTTGCAATAACCAAAACCAAGGGATAACAATCAGGCTCTGGGGCAATAAGCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR TCA 90 bp | AAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTAACCTCGCCTCTTTCTCCTaGGATACAAGAGTTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KALLSRTNAGYETPSISNLASFS*DTRVSE Trigger: CTCAGAAACTCTTGTATCTCAGGAGAAAGAGGCGAG...GTTAGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CCA 90 bp | TGCAGATACGTTAGTCACCTGCAGCCTACTGGTGGTTCTGCAAGTGCAGGAAGCAAACACTCTGAAACGTaGGTGCTCGCAAAGAATCTC | + |
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Preference number: 4 (lower is better) Translates to: CRYVSHLQPTGGSASAGSKHSET*VLAKNL Trigger: GAGATTCTTTGCGAGCACCCACGTTTCAGAGTGTTT...GCTTCCTGCACTTGCAGAACCACCAGTAGGCTGCAGGTGACTAACGTATCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTCCAAGTTTGGTGATCTaGAGGTCCCCATTGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: PKALLSRTNAGYETPSISPSLVI*RSPLIF Trigger: AAAGATCAATGGGGACCTCCAGATCACCAAACTTGG...AGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 72 bp | GTGCAGGAAGCAGTTTCCCTGGAAGCATGGTCACTGTaGGCTGAGATCCTGGGACTTAATCTTTCAGATGAC | + |
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Preference number: 4 (lower is better) Translates to: VQEAVSLEAWSL*AEILGLNLSDD Trigger: GTCATCTGAAAGATTAAGTCCCAGGATCTCAGCCAACAGTGACCATGCTTCCAGGGAAACTGCTTCCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 72 bp | CTTATTGCCCCAGAGCCTGATTGTTATCCCTTGGTTTaGGTTATTGCAAGACTAGGGCCCTGGGTGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: LIAPEPDCYPLV*VIARLGPWVDR Trigger: TCTGTCCACCCAGGGCCCTAGTCTTGCAATAACCAAAACCAAGGGATAACAATCAGGCTCTGGGGCAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR TCA 90 bp | TCCCTGGAAGCATGGTCACTGTTGGCTGAGATCCTGGGACTTAATCTTTCAGATCATCCACAAACACTCTaGAACGTGGGTGCTCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SLEAWSLLAEILGLNLSDHPQTL*NVGARK Trigger: TTTGCGAGCACCCACGTTTCAGAGTGTTTGTGGATG...ATCTGAAAGATTAAGTCCCAGGATCTCAGCCAACAGTGACCATGCTTCCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CCA 90 bp | TGCAGATACGTTAGTCACCTGCAGCCTACTGGTGGTTCTGCAAGTGCAGGAAGCAATGTGCCCACAAAATaGAACTATCAGTCGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CRYVSHLQPTGGSASAGSNVPTK*NYQSWE Trigger: TTCCCACGACTGATAGTTCCATTTTGTGGGCACATT...GCTTCCTGCACTTGCAGAACCACCAGTAGGCTGCAGGTGACTAACGTATCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR TCA 90 bp | TCTTCTTCTGGGCAAACCACAGATGAGGTTGTCACTCTGGACTTAAACTGCACAACGGCTGGTCTGGGATaGATGGAAAGTAAGGGATTG | + |
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Preference number: 4 (lower is better) Translates to: SSSGQTTDEVVTLDLNCTTAGLG*MESKGL Trigger: CAATCCCTTACTTTCCATTCATCCCAGACCAGCCGT...TGTGCAGTTTAAGTCCAGAGTGACAACCTCATCTGTGGTTTGCCCAGAAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR GCA 90 bp | AAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTAACAAGGAGTTGTTTAAGTaGCCATCATCAAGTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KALLSRTNAGYETPSISNKELFK*PSSSFT Trigger: GGTGAAACTTGATGATGGGCACTTAAACAACTCCTT...GTTAGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR GCA 90 bp | CAGCAGGTCTTGGTGGACAAGGCTTTGAATATAACACCATGGAACTGTGCTAAAACTCTGAAACGTGGGTaGTCGCAAAGAATCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QQVLVDKALNITPWNCAKTLKRG*SQRIST Trigger: GGTGGAGATTCTTTGCGAGCACCCACGTTTCAGAGT...TTTAGCACAGTTCCATGGTGTTATATTCAAAGCCTTGTCCACCAAGACCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 72 bp | CTTGAAATTGCACTTTCCATCCTGAATTCCCCACATTaGACCTCTCAGGCTGAGGAGACTGTGAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEIALSILNSPH*TSQAEETVNLS Trigger: GGACAAGTTCACAGTCTCCTCAGCCTGAGAGGTCAAATGTGGGGAATTCAGGATGGAAAGTGCAATTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CCA 90 bp | TCACAGGAAGGAGAAAAAGCAATGCAAACAAAAGTTCCCATCATCGACAAGAACTGGAACTATCAGTCGTaGGAAGTACACGTCGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQEGEKAMQTKVPIIDKNWNYQS*EVHVGL Trigger: CAAGCCGACGTGTACTTCCCACGACTGATAGTTCCA...GTTCTTGTCGATGATGGGAACTTTTGTTTGCATTGCTTTTTCTCCTTCCTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR TCA 90 bp | GAAGGAGAAAAAGCAATGCAAACAAAAGTTCCCATCATCGACAAGAACTTTAGAAAGTACACGTCGGCTTaGACTGGAGAACCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGEKAMQTKVPIIDKNFRKYTSA*TGEPKE Trigger: CTCCTTGGGTTCTCCAGTTCAAGCCGACGTGTACTT...TCTAAAGTTCTTGTCGATGATGGGAACTTTTGTTTGCATTGCTTTTTCTCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR GCA 90 bp | GAAGGAGAAAAAGCAATGCAAACAAAAGTTCCCATCATCGACAAGAACTTTAGATCACTAATACCTTCTTaGCTGGTCTCATGCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGEKAMQTKVPIIDKNFRSLIPS*LVSCHL Trigger: AAGGTGGCATGAGACCAGGCAAGAAGGTATTAGTGA...TCTAAAGTTCTTGTCGATGATGGGAACTTTTGTTTGCATTGCTTTTTCTCCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 72 bp | TCTCATAAATGTTTTTCAGGGTGTGTTCTAAGTCTCTaGACAGACACTCCTCTAAAGTGGCTTTTCAACCCA | + |
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Preference number: 4 (lower is better) Translates to: SHKCFSGCVLSL*TDTPLKWLFNP Trigger: TGGGTTGAAAAGCCACTTTAGAGGAGTGTCTGTCAAGAGACTTAGAACACACCCTGAAAAACATTTATGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| 3UTR CAA 72 bp | AAAGCACTTATAGCAATTTATGTCAAGAAGCCAAAGTaGAGGGGTAAGGGGAATATGTTCAAATTCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KALIAIYVKKPK*RGKGNMFKFFK Trigger: CTTAAAGAATTTGAACATATTCCCCTTACCCCTCAACTTTGGCTTCTTGACATAAATTGCTATAAGTGCTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS TCA 90 bp | GAATGGAAAGTAAGGGATTGCCGACTGCTCCTCGCCTCTTTCTCCTaGGATACAAGAGTTTCTGAGCAGCTGCCGGTCTGTGAACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: EWKVRDCRLLLASFS*DTRVSEQLPVCEHS Trigger: GCTGTGTTCACAGACCGGCAGCTGCTCAGAAACTCTTGTATCTCAGGAGAAAGAGGCGAGGAGCAGTCGGCAATCCCTTACTTTCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS GCA 90 bp | GTTTCTGAGCAGCTGCCGGTCTGTGAACACAGCTTTGAGTTCAATTaGCACATCGGCAGGAGGATCTTCAGAGTCTCCACAGGTCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSEQLPVCEHSFEFN*HIGRRIFRVSTGQA Trigger: AGCTTGACCTGTGGAGACTCTGAAGATCCTCCTGCCGATGTGGCAATTGAACTCAAAGCTGTGTTCACAGACCGGCAGCTGCTCAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CAA 90 bp | AAGGCCCTTCTCTCTAGGACCAACGCAGGGTATGAAACACCGAGCATCTCTAACGCAAAGCTTTCGGGGTaGAGATCTACGATGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: KALLSRTNAGYETPSISNAKLSG*RSTMPI Trigger: GATGGGCATCGTAGATCTCAACCCCGAAAGCTTTGC...GTTAGAGATGCTCGGTGTTTCATACCCTGCGTTGGTCCTAGAGAGAAGGGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CAA 90 bp | CTGTTGGCTGAGATCCTGGGACTTAATCTTTCAGATGACCTAGCTGGATCCCACATGGAAAGTAAGGGATaGCCGACTGCTCCTCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLAEILGLNLSDDLAGSHMESKG*PTAPRL Trigger: GAGGCGAGGAGCAGTCGGCAATCCCTTACTTTCCAT...GTGGGATCCAGCTAGGTCATCTGAAAGATTAAGTCCCAGGATCTCAGCCAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS TCA 90 bp | TGCCCACAAAATGGAACTATCAGTCGTGGGAAGTACACGTCGGCTTaGACTGGAGAACCCAAGGAGTTGTTTAAGTGCCCATCATCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CPQNGTISRGKYTSA*TGEPKELFKCPSSS Trigger: ACTTGATGATGGGCACTTAAACAACTCCTTGGGTTCTCCAGTTCAAGCCGACGTGTACTTCCCACGACTGATAGTTCCATTTTGTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS CCA 90 bp | ATAAAAATCAAAAAGTTGGTGTCCATCCACAAACACTCTGAAACGTaGGTGCTCGCAAAGAATCTCCACCCTGAACGGCTGGTCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IKIKKLVSIHKHSET*VLAKNLHPERLVWD Trigger: ATCCCAGACCAGCCGTTCAGGGTGGAGATTCTTTGCGAGCACCCACGTTTCAGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CAA 90 bp | TATAATGGCTCAGTGTCTTTCTTGCGAGTTTTCTTCTTCTGGGCAAACCACAGAGGAGAACCCAAGGAGTaGTTTAAGTGCCCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: YNGSVSFLRVFFFWANHRGEPKE*FKCPSS Trigger: TGATGATGGGCACTTAAACAACTCCTTGGGTTCTCC...TCTGTGGTTTGCCCAGAAGAAGAAAACTCGCAAGAAAGACACTGAGCCATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTCTTGGTGGACAAGGCTTTGAATATAACACCATGGAACTGTGCTAAATCTGTGAACACAGCTTaGAGTTCAATTGCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: QQVLVDKALNITPWNCAKSVNTA*SSIATS Trigger: CGATGTGGCAATTGAACTCAAAGCTGTGTTCACAGA...TTTAGCACAGTTCCATGGTGTTATATTCAAAGCCTTGTCCACCAAGACCTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CAA 90 bp | AACATTATCTTTACATTAATGCTGGAAAATGCCAAAGCTGTTTTCTCAAGGCAGGAAGTACACGTCGGCTaGAACTGGAGAACCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NIIFTLMLENAKAVFSRQEVHVG*NWRTQG Trigger: TCCTTGGGTTCTCCAGTTCAAGCCGACGTGTACTTC...CTGCCTTGAGAAAACAGCTTTGGCATTTTCCAGCATTAATGTAAAGATAATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CAA 90 bp | TCACAGGAAGGAGAAAAAGCAATGCAAACAAAAGTTCCCATCATCGACAAGAACATCTGGAGGTCCCCATaGATCTTTATGGTGTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SQEGEKAMQTKVPIIDKNIWRSP*IFMVSI Trigger: AATTGACACCATAAAGATCAATGGGGACCTCCAGAT...GTTCTTGTCGATGATGGGAACTTTTGTTTGCATTGCTTTTTCTCCTTCCTGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS-3UTR CAA 90 bp | GAACATTATCTTTACATTAATGCTGGAAAATGCCAAAGCTGTTTTCTCAAGGCAATCACTAATACCTTCTaGCCTGGTCTCATGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: EHYLYINAGKCQSCFLKAITNTF*PGLMPP Trigger: AGGTGGCATGAGACCAGGCAAGAAGGTATTAGTGAT...TGCCTTGAGAAAACAGCTTTGGCATTTTCCAGCATTAATGTAAAGATAATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS CCA 72 bp | GTGCTCGCAAAGAATCTCCACCCTGAACGGCTGGTCTaGGATGAATGGAAAGTAAGGGATTGCCGACTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLAKNLHPERLV*DEWKVRDCRLL Trigger: GAGCAGTCGGCAATCCCTTACTTTCCATTCATCCCAGACCAGCCGTTCAGGGTGGAGATTCTTTGCGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS GCA 72 bp | CAGCTGCCGGTCTGTGAACACAGCTTTGAGTTCAATTaGCACATCGGCAGGAGGATCTTCAGAGTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: QLPVCEHSFEFN*HIGRRIFRVST Trigger: TGTGGAGACTCTGAAGATCCTCCTGCCGATGTGGCAATTGAACTCAAAGCTGTGTTCACAGACCGGCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS GCA 72 bp | AGTTGGTGTCCATCCACAAACACTCTGAAACGTGGGTaGTCGCAAAGAATCTCCACCCTGAACGGCTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SWCPSTNTLKRG*SQRISTLNGWS Trigger: AGACCAGCCGTTCAGGGTGGAGATTCTTTGCGAGCACCCACGTTTCAGAGTGTTTGTGGATGGACACCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS CAA 72 bp | GAGTTTCTGAGCAGCTGCCGGTCTGTGAACACAGCTTaGAGTTCAATTGCCACATCGGCAGGAGGATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EFLSSCRSVNTA*SSIATSAGGSS Trigger: TGAAGATCCTCCTGCCGATGTGGCAATTGAACTCAAAGCTGTGTTCACAGACCGGCAGCTGCTCAGAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS CAA 90 bp | GAGATACAAGAGTTTCTGAGCAGCTGCCGGTCTGTGAACACAGCTTaGAGTTCAATTGCCACATCGGCAGGAGGATCTTCAGAGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EIQEFLSSCRSVNTA*SSIATSAGGSSESP Trigger: TGGAGACTCTGAAGATCCTCCTGCCGATGTGGCAATTGAACTCAAAGCTGTGTTCACAGACCGGCAGCTGCTCAGAAACTCTTGTATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS CCA 72 bp | AAAAAGTTGGTGTCCATCCACAAACACTCTGAAACGTaGGTGCTCGCAAAGAATCTCCACCCTGAACGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KKLVSIHKHSET*VLAKNLHPERL Trigger: CAGCCGTTCAGGGTGGAGATTCTTTGCGAGCACCCACGTTTCAGAGTGTTTGTGGATGGACACCAACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS TCA 72 bp | AATGGAACTATCAGTCGTGGGAAGTACACGTCGGCTTaGACTGGAGAACCCAAGGAGTTGTTTAAGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: NGTISRGKYTSA*TGEPKELFKCP Trigger: TGGGCACTTAAACAACTCCTTGGGTTCTCCAGTTCAAGCCGACGTGTACTTCCCACGACTGATAGTTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS CAA 72 bp | GGGTTGAGATCTACGATGCCCATCACTAATACCTTCTaGCCTGGTCTCATGCCACCTTTAATGTGCCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: GLRSTMPITNTF*PGLMPPLMCPQ Trigger: TTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGGTATTAGTGATGGGCATCGTAGATCTCAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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| CDS CAA 90 bp | AAGCTTTCGGGGTTGAGATCTACGATGCCCATCACTAATACCTTCTaGCCTGGTCTCATGCCACCTTTAATGTGCCCACAAAATGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: KLSGLRSTMPITNTF*PGLMPPLMCPQNGT Trigger: AGTTCCATTTTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGGTATTAGTGATGGGCATCGTAGATCTCAACCCCGAAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047028.9 |
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