Pregenerated sensors for LGALS8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057554Ensembl transcript IDs: ENSMUST00000099820.10, ENSMUST00000099821.10, ENSMUST00000124888.8, ENSMUST00000135166.8, ENSMUST00000143693.8, ENSMUST00000144283.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGATTGGCTGAATACTCCTAAACCCCAGCAGAATTCTGTCCTGTaGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTT | + |
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Preference number: 1 (lower is better) Translates to: ADWLNTPKPQQNSVL*FNVPDLAAAADRHL Trigger: AAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGAATTCTGCTGGGGTTTAGGAGTATTCAGCCAATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR GCA 90 bp | CAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTTTaGCACAGGTACCCACACACCCTGGACTTGAGCGCCAATCAACCA | + |
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Preference number: 1 (lower is better) Translates to: QEGFTHTVYPTSALL*HRYPHTLDLSANQP Trigger: TGGTTGATTGGCGCTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR CCA 90 bp | CGAGGGCTAGTCTCCACACCAACTAAGCCTTTCACACTACGCCCCTaGGTTTGCTTTGATAGTGCTTGTTTTATATATACGTCCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: RGLVSTPTKPFTLRP*VCFDSACFIYTSKR Trigger: CCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCAGGGGCGTAGTGTGAAAGGCTTAGTTGGTGTGGAGACTAGCCCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR CCA 90 bp | CTCATTCTTTATGAAGACATAACTCTGGAGAATTCTAGAGCCTCCTaGCCTCCGTACAAATTACCCAGTTCCACCCACCACCCCATATTG | + |
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Preference number: 1 (lower is better) Translates to: LILYEDITLENSRAS*PPYKLPSSTHHPIL Trigger: CAATATGGGGTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTCTTCATAAAGAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR GCA 90 bp | CCCTGCCATGTCTGTGCCCGGCTCAGAGAATATACAAAGGAAGTATaGTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCACT | + |
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Preference number: 1 (lower is better) Translates to: PCHVCARLREYTKEV*LPSLLASICSILGT Trigger: AGTGCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGTATATTCTCTGAGCCGGGCACAGACATGGCAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR TCA 90 bp | CCTGGCCTCCGTACAAATTACCCAGTTCCACCCACCACCCCATATTaGAGAGTGAACATAATAAATTTGCATGAAAATGAAGGACTAGCA | + |
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Preference number: 1 (lower is better) Translates to: PGLRTNYPVPPTTPY*RVNIINLHENEGLA Trigger: TGCTAGTCCTTCATTTTCATGCAAATTTATTATGTTCACTCTTCAATATGGGGTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR TCA 90 bp | GCTCAACTTAGCAATATAAACAATATGGTGAAAGCGAGATGCATTTaGCATGGCCAGTACCGGATAAGCCATTTTGTATTTCGGGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: AQLSNINNMVKARCI*HGQYRISHFVFRGF Trigger: AAACCCCCGAAATACAAAATGGCTTATCCGGTACTGGCCATGTCAAATGCATCTCGCTTTCACCATATTGTTTATATTGCTAAGTTGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTAAGAGGGACCCAGTGTaGAGAGCCTCTCTGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SVLWFNVPDLAAAADRHLKRDPV*RASLAV Trigger: CACTGCCAGAGAGGCTCTGCACACTGGGTCCCTCTT...AAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTGGACCACACAAGTTCTaGGCCCTGCCATGTCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SVLWFNVPDLAAAADRHLGPHKF*ALPCLC Trigger: GCACAGACATGGCAGGGCCCAGAACTTGTGTGGTCC...AAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCTGGGCCCTGCCATGTCTGTGCCCGGCTCAGAGAATATACAAAGGAAGTGCAGTGAGCTGTGATTaGCCCGGCTCTGTTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KFWALPCLCPAQRIYKGSAVSCD*PGSVPL Trigger: CAGAGGAACAGAGCCGGGGCAATCACAGCTCACTGC...ACTTCCTTTGTATATTCTCTGAGCCGGGCACAGACATGGCAGGGCCCAGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGGCAGTGAGCTGTGATTaGCCCGGCTCTGTTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSNFCLTLPQVPTHPGLEAVSCD*PGSVPL Trigger: CAGAGGAACAGAGCCGGGGCAATCACAGCTCACTGC...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR CCA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGGGACCACACAAGTTCTaGGCCCTGCCATGTCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LSNFCLTLPQVPTHPGLEGPHKF*ALPCLC Trigger: GCACAGACATGGCAGGGCCCAGAACTTGTGTGGTCC...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR CCA 90 bp | GACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTGGACCACACAAGTTCTaGGCCCTGCCATGTCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: DITLENSRASWPPYKLPSGPHKF*ALPCLC Trigger: GCACAGACATGGCAGGGCCCAGAACTTGTGTGGTCC...ACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR CAA 90 bp | CCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTTaGCCACAGGTACCCACACACCCTGGACTTGAGCGCCAATCAACC | + |
|
Preference number: 2 (lower is better) Translates to: PRGFYTHGLSNFCLT*PQVPTHPGLERQST Trigger: GGTTGATTGGCGCTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR TCA 90 bp | CGCTGCTGCTGCAGACCGACATCTTCAGACCCAAAGGCACGAGGGCTAGTCTCCCACTTAAATATTTGCTaGGTGTGGTTTATAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RCCCRPTSSDPKARGLVSHLNIC*VWFIRG Trigger: CCCTCTTATAAACCACACTCAGCAAATATTTAAGTG...GGAGACTAGCCCTCGTGCCTTTGGGTCTGAAGATGTCGGTCTGCAGCAGCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGGACTTGAGCGCCAATCAACCAGCAGAAATCTGCTTGGAGCAGAACACTGTGGGGTTAATGCAATaGCAGCAAGAAGACCCTACA | + |
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Preference number: 2 (lower is better) Translates to: TLDLSANQPAEICLEQNTVGLMQ*QQEDPT Trigger: TGTAGGGTCTTCTTGCTGGCATTGCATTAACCCCAC...AGTGTTCTGCTCCAAGCAGATTTCTGCTGGTTGATTGGCGCTCAAGTCCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAGAATTCTGTCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGTGGCCTCAGTTTTTCTaGTGTGTTCAGCATCATACA | + |
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Preference number: 2 (lower is better) Translates to: PSRILSCGLMCLTSLLLQWPQFF*CVQHHT Trigger: TGTATGATGCTGAACACAGCAGAAAAACTGAGGCCA...CTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGAATTCTGCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCAGACAACCAGCAGAAATCTaGTTGGAGCAGAACACTTGT | + |
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Preference number: 2 (lower is better) Translates to: SCGLMCLTSLLLQTDIFRQPAEI*LEQNTC Trigger: ACAAGTGTTCTGCTCCAAGCAGATTTCTGCTGGTTG...TCTGAAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGAAAACATGGACCACACAAGTTCTGGGCCCTGCCATGTCTGTGCCCGGCTCCACTTAAATATTTGCTaGGTGTGGTTTATAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LENMDHTSSGPCHVCARLHLNIC*VWFIRG Trigger: CCCTCTTATAAACCACACTCAGCAAATATTTAAGTG...GAGCCGGGCACAGACATGGCAGGGCCCAGAACTTGTGTGGTCCATGTTTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGGTGGGGTTAATGCAATaGCAGCAAGAAGACCCTACA | + |
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Preference number: 2 (lower is better) Translates to: LSNFCLTLPQVPTHPGLEVGLMQ*QQEDPT Trigger: TGTAGGGTCTTCTTGCTGGCATTGCATTAACCCCAC...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCCACCCACCACGATTATGAAAAGGGTTaGTGGGGAAGTAGTGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: ENSRASWPPYKLPSSTHHDYEKG*WGSSVC Trigger: GCAAACACTACTTCCCCAGCAACCCTTTTCATAATC...GTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTAAGAGGGACCCAGTGTaGAGAGCCTCTCTGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTKRDPV*RASLAV Trigger: CACTGCCAGAGAGGCTCTGCACACTGGGTCCCTCTT...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR CCA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTGGACCACACAAGTTCTaGGCCCTGCCATGTCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTGPHKF*ALPCLC Trigger: GCACAGACATGGCAGGGCCCAGAACTTGTGTGGTCC...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCCACCCACCACCACTTAAATATTTGCTaGGTGTGGTTTATAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ENSRASWPPYKLPSSTHHHLNIC*VWFIRG Trigger: CCCTCTTATAAACCACACTCAGCAAATATTTAAGTG...GTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCACTTAAATATTTGCTaGGTGTGGTTTATAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: SVLWFNVPDLAAAADRHLHLNIC*VWFIRG Trigger: CCCTCTTATAAACCACACTCAGCAAATATTTAAGTG...AAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGGATTATGAAAAGGGTTaGTGGGGAAGTAGTGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: LSNFCLTLPQVPTHPGLEDYEKG*WGSSVC Trigger: GCAAACACTACTTCCCCAGCAACCCTTTTCATAATC...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR CCA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGCAGCAGAAATCTGCTTaGAGCAGAACACTTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LSNFCLTLPQVPTHPGLEQQKSA*SRTLVL Trigger: CAAAACAAGTGTTCTGCTCCAAGCAGATTTCTGCTG...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGGACTTGAGCGCCAATCAACCAGCAGAAATCTGCTTGGAGCAGAACACTCACTTAAATATTTGCTaGGTGTGGTTTATAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TLDLSANQPAEICLEQNTHLNIC*VWFIRG Trigger: CCCTCTTATAAACCACACTCAGCAAATATTTAAGTG...AGTGTTCTGCTCCAAGCAGATTTCTGCTGGTTGATTGGCGCTCAAGTCCAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | GATTATGAAAAGGGTTGCTGGGGAAGTAGTGTTTGCCATCCATTAGTATATTTTGCAGTGAGCTGTGATTaGCCCGGCTCTGTTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: DYEKGCWGSSVCHPLVYFAVSCD*PGSVPL Trigger: CAGAGGAACAGAGCCGGGGCAATCACAGCTCACTGC...AAAATATACTAATGGATGGCAAACACTACTTCCCCAGCAACCCTTTTCATAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TTACACACACGGTTTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACAACCAGCAGAAATCTaGTTGGAGCAGAACACTTGT | + |
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Preference number: 2 (lower is better) Translates to: LHTRFIQLLPYFATGTHTQPAEI*LEQNTC Trigger: ACAAGTGTTCTGCTCCAAGCAGATTTCTGCTGGTTG...TGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTGTGGGGTTAATGCAATaGCAGCAAGAAGACCCTACA | + |
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Preference number: 2 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTVGLMQ*QQEDPT Trigger: TGTAGGGTCTTCTTGCTGGCATTGCATTAACCCCAC...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR CCA 90 bp | TTACACACACGGTTTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACATAATTCAGGGTTTTaGCCTCAGTTTTTCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LHTRFIQLLPYFATGTHTHNSGF*PQFFCC Trigger: ACAGCAGAAAAACTGAGGCCAAAACCCTGAATTATG...TGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TATGAAGACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTATGGCCTCAGTTTTTCTaGTGTGTTCAGCATCATACA | + |
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Preference number: 2 (lower is better) Translates to: YEDITLENSRASWPPYKLWPQFF*CVQHHT Trigger: TGTATGATGCTGAACACAGCAGAAAAACTGAGGCCA...TAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTCTTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTCAACCAGCAGAAATCTaGTTGGAGCAGAACACTTGT | + |
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Preference number: 2 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTQPAEI*LEQNTC Trigger: ACAAGTGTTCTGCTCCAAGCAGATTTCTGCTGGTTG...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTTGCTTTGATAGTGCTTGTTTTATATATACGTCCAAGAGGGTTTTACACTGGCCTCAGTTTTTCTaGTGTGTTCAGCATCATACA | + |
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Preference number: 2 (lower is better) Translates to: WVCFDSACFIYTSKRVLHWPQFF*CVQHHT Trigger: TGTATGATGCTGAACACAGCAGAAAAACTGAGGCCA...GTGTAAAACCCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCATTTTGCAGTTTAGAGATAGAATTTCGGAATATACAACAGAAGGTCTCTGGCCTCAGTTTTTCTaGTGTGTTCAGCATCATACA | + |
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Preference number: 2 (lower is better) Translates to: KGILQFRDRISEYTTEGLWPQFF*CVQHHT Trigger: TGTATGATGCTGAACACAGCAGAAAAACTGAGGCCA...GAGACCTTCTGTTGTATATTCCGAAATTCTATCTCTAAACTGCAAAATGCCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCATTTTGCAGTTTAGAGATAGAATTTCGGAATATACAACAGAAGGTCTCCAGCAGAAATCTGCTTaGAGCAGAACACTTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: KGILQFRDRISEYTTEGLQQKSA*SRTLVL Trigger: CAAAACAAGTGTTCTGCTCCAAGCAGATTTCTGCTG...GAGACCTTCTGTTGTATATTCCGAAATTCTATCTCTAAACTGCAAAATGCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR CAA 90 bp | AACATAATAAATTTGCATGAAAATGAAGGACTAGCAGTTGCTGCCTaGAGTAAGACTGCTGATGGTATTATTTCATATGCACAAGTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: NIINLHENEGLAVAA*SKTADGIISYAQVH Trigger: ATGCACTTGTGCATATGAAATAATACCATCAGCAGTCTTACTCAAGGCAGCAACTGCTAGTCCTTCATTTTCATGCAAATTTATTATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR TCA 72 bp | GGACCCAGTGTGCAGAGCCTCTCTGGCAGTGAGCTGTaGTTGCCCCGGCTCTGTTCCTCTGAATGTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GPSVQSLSGSEL*LPRLCSSECTA Trigger: TGCAGTACATTCAGAGGAACAGAGCCGGGGCAATCACAGCTCACTGCCAGAGAGGCTCTGCACACTGGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR GCA 72 bp | TATTTGCTGAGTGTGGTTTATAAGAGGGACCCAGTGTaGAGAGCCTCTCTGGCAGTGAGCTGTGATTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: YLLSVVYKRDPV*RASLAVSCDCP Trigger: GGGGCAATCACAGCTCACTGCCAGAGAGGCTCTGCACACTGGGTCCCTCTTATAAACCACACTCAGCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR CCA 72 bp | GTACGAAGTGCTAGAAAACATGGACCACACAAGTTCTaGGCCCTGCCATGTCTGTGCCCGGCTCAGAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: VRSARKHGPHKF*ALPCLCPAQRI Trigger: TATTCTCTGAGCCGGGCACAGACATGGCAGGGCCCAGAACTTGTGTGGTCCATGTTTTCTAGCACTTCGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCCACCCACCACCTAGCAGTTGCTGCCTaGAGTAAGACTGCTGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: ENSRASWPPYKLPSSTHHLAVAA*SKTADG Trigger: ACCATCAGCAGTCTTACTCAAGGCAGCAACTGCTAG...GTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR GCA 72 bp | CATGGACCACACAAGTTCTGGGCCCTGCCATGTCTGTaGCCGGCTCAGAGAATATACAAAGGAAGTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HGPHKFWALPCL*PAQRIYKGSML Trigger: AAGCATACTTCCTTTGTATATTCTCTGAGCCGGGCACAGACATGGCAGGGCCCAGAACTTGTGTGGTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR GCA 72 bp | TTTACACACACGGTTTATCCAACTTCTGCCTTACTTTaGCACAGGTACCCACACACCCTGGACTTGAGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: FTHTVYPTSALL*HRYPHTLDLSA Trigger: GGCGCTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR CCA 72 bp | CTGAATACTCCTAAACCCCAGCAGAATTCTGTCCTGTaGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LNTPKPQQNSVL*FNVPDLAAAAD Trigger: GTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGAATTCTGCTGGGGTTTAGGAGTATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR CCA 72 bp | TATGAAGACATAACTCTGGAGAATTCTAGAGCCTCCTaGCCTCCGTACAAATTACCCAGTTCCACCCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: YEDITLENSRAS*PPYKLPSSTHH Trigger: GTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTCTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR CCA 72 bp | GTCTCCACACCAACTAAGCCTTTCACACTACGCCCCTaGGTTTGCTTTGATAGTGCTTGTTTTATATATACG | + |
|
Preference number: 3 (lower is better) Translates to: VSTPTKPFTLRP*VCFDSACFIYT Trigger: CGTATATATAAAACAAGCACTATCAAAGCAAACCCAGGGGCGTAGTGTGAAAGGCTTAGTTGGTGTGGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR GCA 72 bp | ACACCAACTAAGCCTTTCACACTACGCCCCTGGGTTTaGTTTGATAGTGCTTGTTTTATATATACGTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPTKPFTLRPWV*FDSACFIYTSK Trigger: CTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCAGGGGCGTAGTGTGAAAGGCTTAGTTGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGAAGACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTAACAAAGGAAGTATGCTaGCCATCCCTATTAGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: YEDITLENSRASWPPYKLTKEVC*PSLLAS Trigger: ACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT...TAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTCTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR TCA 72 bp | TCATATGCACAAGTGCATATATCTAAGCAGATTGGCTaGATACTCCTAAACCCCAGCAGAATTCTGTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SYAQVHISKQIG*ILLNPSRILSC Trigger: ACAGGACAGAATTCTGCTGGGGTTTAGGAGTATTCAGCCAATCTGCTTAGATATATGCACTTGTGCATATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR GCA 72 bp | GTCTGTGCCCGGCTCAGAGAATATACAAAGGAAGTATaGTTGCCATCCCTATTAGCTAGTATATGTAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: VCARLREYTKEV*LPSLLASICSI Trigger: TATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGTATATTCTCTGAGCCGGGCACAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR CCA 72 bp | TATAAACAATATGGTGAAAGCGAGATGCATTTGACATaGCCAGTACCGGATAAGCCATTTTGTATTTCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: YKQYGESEMHLT*PVPDKPFCISG Trigger: CCCCGAAATACAAAATGGCTTATCCGGTACTGGCCATGTCAAATGCATCTCGCTTTCACCATATTGTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGAAGACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTAACCCACCACCCCATATaGAAGAGTGAACATAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: YEDITLENSRASWPPYKLTHHPI*KSEHNK Trigger: TTTATTATGTTCACTCTTCAATATGGGGTGGTGGGT...TAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTCTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCCTTGAGTAAGACTGCTGATGGTATTATTTCATATGCACAAGTGCATATAGCCCCTGGGTTTGCTTaGATAGTGCTTGTTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: AALSKTADGIISYAQVHIAPGFA*IVLVLY Trigger: ATATAAAACAAGCACTATCAAAGCAAACCCAGGGGC...TATATGCACTTGTGCATATGAAATAATACCATCAGCAGTCTTACTCAAGGCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTTTGCTTTGATAGTGCTTGTTTTATATATACGTCCAAGAGGGTTTTACACACAAAGGAAGTATGCTaGCCATCCCTATTAGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: WVCFDSACFIYTSKRVLHTKEVC*PSLLAS Trigger: ACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT...GTGTAAAACCCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTATGAAAAGGGTTGCTGGGGAAGTAGTGTTTGCCATCCATTAGTATATTTTACAAAGGAAGTATGCTaGCCATCCCTATTAGCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: DYEKGCWGSSVCHPLVYFTKEVC*PSLLAS Trigger: ACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT...AAAATATACTAATGGATGGCAAACACTACTTCCCCAGCAACCCTTTTCATAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCATTTTGCAGTTTAGAGATAGAATTTCGGAATATACAACAGAAGGTCTCGCCCCTGGGTTTGCTTaGATAGTGCTTGTTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: KGILQFRDRISEYTTEGLAPGFA*IVLVLY Trigger: ATATAAAACAAGCACTATCAAAGCAAACCCAGGGGC...GAGACCTTCTGTTGTATATTCCGAAATTCTATCTCTAAACTGCAAAATGCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGCAGAGCCTCTCTGGCAGTGAGCTGTGATTGCCCCGGCTCTGTTCCTCAACCTTGCTTCAAATaGCAGGCTCAGCTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVCRASLAVSCDCPGSVPQPCFK*QAQLEL Trigger: AAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTG...AGGAACAGAGCCGGGGCAATCACAGCTCACTGCCAGAGAGGCTCTGCACACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGTGCAGAGCCTCTCTGGCAGTGAGCTGTGATTGCCCCGGCTCTGTTCCTAACCTGGAATCTTTCTaGATCTTTAGGGACATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVCRASLAVSCDCPGSVPNLESF*IFRDMP Trigger: GGGCATGTCCCTAAAGATTCAGAAAGATTCCAGGTT...AGGAACAGAGCCGGGGCAATCACAGCTCACTGCCAGAGAGGCTCTGCACACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR TCA 90 bp | CGCTGCTGCTGCAGACCGACATCTTCAGACCCAAAGGCACGAGGGCTAGTCTCCTCTCCCCAGGCATCCTaGAGAAAGGAATTTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: RCCCRPTSSDPKARGLVSSPQAS*RKEFLT Trigger: TGTAAGAAATTCCTTTCTTCAGGATGCCTGGGGAGA...GGAGACTAGCCCTCGTGCCTTTGGGTCTGAAGATGTCGGTCTGCAGCAGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGTGCAGAGCCTCTCTGGCAGTGAGCTGTGATTGCCCCGGCTCTGTTCCTTCTCCCCAGGCATCCTaGAGAAAGGAATTTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PVCRASLAVSCDCPGSVPSPQAS*RKEFLT Trigger: TGTAAGAAATTCCTTTCTTCAGGATGCCTGGGGAGA...AGGAACAGAGCCGGGGCAATCACAGCTCACTGCCAGAGAGGCTCTGCACACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | GACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTGGCCACGTCTGCTCTTaGCTTCAGGCTGTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DITLENSRASWPPYKLPSGHVCS*LQAVAQ Trigger: CTGGGCAACAGCCTGAAGCCAAGAGCAGACGTGGCC...ACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR CCA 90 bp | GAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCCACCCACCACAATGGCAGGCTCAGCTaGAGCTTGCCTGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENSRASWPPYKLPSSTHHNGRLS*SLPGFC Trigger: ACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATT...GTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCTGGGCCCTGCCATGTCTGTGCCCGGCTCAGAGAATATACAAAGGAAGTAATGGCAGGCTCAGCTaGAGCTTGCCTGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KFWALPCLCPAQRIYKGSNGRLS*SLPGFC Trigger: ACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATT...ACTTCCTTTGTATATTCTCTGAGCCGGGCACAGACATGGCAGGGCCCAGAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCAGAGAGCCAGGCTTCAATTaGTCAGTAATGGTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: SCGLMCLTSLLLQTDIFREPGFN*SVMVPT Trigger: TGTTGGCACCATTACTGAGCAATTGAAGCCTGGCTC...TCTGAAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCTGGGCCCTGCCATGTCTGTGCCCGGCTCAGAGAATATACAAAGGAAGTCCGTTCACAGCCACCTaGAATTTGTTCTTGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KFWALPCLCPAQRIYKGSPFTAT*NLFLST Trigger: GGTGCTCAAGAACAAATTCCAGGTGGCTGTGAACGG...ACTTCCTTTGTATATTCTCTGAGCCGGGCACAGACATGGCAGGGCCCAGAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAGAATTCTGTCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGCAGCTGGAGCTTGCCTaGCTTTTGTATATTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRILSCGLMCLTSLLLQQLELA*LLYILS Trigger: AGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTG...CTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGAATTCTGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCTGGGCCCTGCCATGTCTGTGCCCGGCTCAGAGAATATACAAAGGAAGTTTCGTCCAGGACCCATaGAGGCATTCAACCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KFWALPCLCPAQRIYKGSFVQDP*RHSTLL Trigger: AAGCAAGGTTGAATGCCTCCATGGGTCCTGGACGAA...ACTTCCTTTGTATATTCTCTGAGCCGGGCACAGACATGGCAGGGCCCAGAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTAACCTGGAATCTTTCTaGATCTTTAGGGACATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVLWFNVPDLAAAADRHLNLESF*IFRDMP Trigger: GGGCATGTCCCTAAAGATTCAGAAAGATTCCAGGTT...AAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCAGAAACCTGGAATCTTTCTaGATCTTTAGGGACATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCGLMCLTSLLLQTDIFRNLESF*IFRDMP Trigger: GGGCATGTCCCTAAAGATTCAGAAAGATTCCAGGTT...TCTGAAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCAGACAGCTGGAGCTTGCCTaGCTTTTGTATATTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCGLMCLTSLLLQTDIFRQLELA*LLYILS Trigger: AGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTG...TCTGAAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | GAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCCACCCACCACCAGCTGGAGCTTGCCTaGCTTTTGTATATTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ENSRASWPPYKLPSSTHHQLELA*LLYILS Trigger: AGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTG...GTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGTTCGTCCAGGACCCATaGAGGCATTCAACCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSNFCLTLPQVPTHPGLEFVQDP*RHSTLL Trigger: AAGCAAGGTTGAATGCCTCCATGGGTCCTGGACGAA...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR CAA 72 bp | TTTTACACACACGGTTTATCCAACTTCTGCCTTACTTaGCCACAGGTACCCACACACCCTGGACTTGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FYTHGLSNFCLT*PQVPTHPGLER Trigger: GCGCTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTGGACTTGAGCGCCAATCAACCAGCAGAAATCTGCTTGGAGCAGAACACTTCTCCCCAGGCATCCTaGAGAAAGGAATTTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: TLDLSANQPAEICLEQNTSPQAS*RKEFLT Trigger: TGTAAGAAATTCCTTTCTTCAGGATGCCTGGGGAGA...AGTGTTCTGCTCCAAGCAGATTTCTGCTGGTTGATTGGCGCTCAAGTCCAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR GCA 90 bp | GACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTAGGCGTGGGTTCAAGTaGAGAGCGATATCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DITLENSRASWPPYKLPSRRGFK*RAISLV Trigger: AACAAGGGATATCGCTCTGCACTTGAACCCACGCCT...ACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCTGGGCCCTGCCATGTCTGTGCCCGGCTCAGAGAATATACAAAGGAAGTCAGCTGGAGCTTGCCTaGCTTTTGTATATTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFWALPCLCPAQRIYKGSQLELA*LLYILS Trigger: AGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTG...ACTTCCTTTGTATATTCTCTGAGCCGGGCACAGACATGGCAGGGCCCAGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTACACACACGGTTTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACTTCGTCCAGGACCCATaGAGGCATTCAACCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLHTRFIQLLPYFATGTHFVQDP*RHSTLL Trigger: AAGCAAGGTTGAATGCCTCCATGGGTCCTGGACGAA...GTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR TCA 90 bp | TTACACACACGGTTTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACAAATGCTTTCACATTaGGGCGTGGGTTCAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTRFIQLLPYFATGTHTQMLSH*GVGSSA Trigger: TGCACTTGAACCCACGCCTCAATGTGAAAGCATTTG...TGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR TCA 90 bp | GACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCTCCCCAGGCATCCTaGAGAAAGGAATTTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: DITLENSRASWPPYKLPSSPQAS*RKEFLT Trigger: TGTAAGAAATTCCTTTCTTCAGGATGCCTGGGGAGA...ACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTACACACACGGTTTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACGAGCCAGGCTTCAATTaGTCAGTAATGGTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLHTRFIQLLPYFATGTHEPGFN*SVMVPT Trigger: TGTTGGCACCATTACTGAGCAATTGAAGCCTGGCTC...GTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCGGCCACGTCTGCTCTTaGCTTCAGGCTGTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKEVCLPSLLASICSILGGHVCS*LQAVAQ Trigger: CTGGGCAACAGCCTGAAGCCAAGAGCAGACGTGGCC...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTGCTTTGATAGTGCTTGTTTTATATATACGTCCAAGAGGGTTTTACACGGCCACGTCTGCTCTTaGCTTCAGGCTGTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WVCFDSACFIYTSKRVLHGHVCS*LQAVAQ Trigger: CTGGGCAACAGCCTGAAGCCAAGAGCAGACGTGGCC...GTGTAAAACCCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR GCA 90 bp | AAACAATATGGTGAAAGCGAGATGCATTTGACATGGCCAGTACCGGATAAGCCAGGCTCAGCTGGAGCTTaGCTGGCTTTTGTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQYGESEMHLTWPVPDKPGSAGA*LAFVYS Trigger: AGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCC...TGGCTTATCCGGTACTGGCCATGTCAAATGCATCTCGCTTTCACCATATTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTAATGGCAGGCTCAGCTaGAGCTTGCCTGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTNGRLS*SLPGFC Trigger: ACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATT...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | AAACAATATGGTGAAAGCGAGATGCATTTGACATGGCCAGTACCGGATAAGCCACAGCTGGAGCTTGCCTaGCTTTTGTATATTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQYGESEMHLTWPVPDKPQLELA*LLYILS Trigger: AGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTG...TGGCTTATCCGGTACTGGCCATGTCAAATGCATCTCGCTTTCACCATATTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTCAACCTTGCTTCAAATaGCAGGCTCAGCTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTQPCFK*QAQLEL Trigger: AAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTG...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR CAA 72 bp | CAACTAAGCCTTTCACACTACGCCCCTGGGTTTGCTTaGATAGTGCTTGTTTTATATATACGTCCAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLSLSHYAPGFA*IVLVLYIRPRG Trigger: CCCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCAGGGGCGTAGTGTGAAAGGCTTAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR GCA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTGAGCCAGGCTTCAATTaGTCAGTAATGGTGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTEPGFN*SVMVPT Trigger: TGTTGGCACCATTACTGAGCAATTGAAGCCTGGCTC...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCTTGAGTAAGACTGCTGATGGTATTATTTCATATGCACAAGTGCATATAAGGCGTGGGTTCAAGTaGAGAGCGATATCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AALSKTADGIISYAQVHIRRGFK*RAISLV Trigger: AACAAGGGATATCGCTCTGCACTTGAACCCACGCCT...TATATGCACTTGTGCATATGAAATAATACCATCAGCAGTCTTACTCAAGGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCAATGGCAGGCTCAGCTaGAGCTTGCCTGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKEVCLPSLLASICSILGNGRLS*SLPGFC Trigger: ACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATT...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCTTGAGTAAGACTGCTGATGGTATTATTTCATATGCACAAGTGCATATAGGCTCAGCTGGAGCTTaGCTGGCTTTTGTATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AALSKTADGIISYAQVHIGSAGA*LAFVYS Trigger: AGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCC...TATATGCACTTGTGCATATGAAATAATACCATCAGCAGTCTTACTCAAGGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCAGGCGTGGGTTCAAGTaGAGAGCGATATCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKEVCLPSLLASICSILGRRGFK*RAISLV Trigger: AACAAGGGATATCGCTCTGCACTTGAACCCACGCCT...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR GCA 90 bp | GATTATGAAAAGGGTTGCTGGGGAAGTAGTGTTTGCCATCCATTAGTATATTTTAGGCGTGGGTTCAAGTaGAGAGCGATATCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DYEKGCWGSSVCHPLVYFRRGFK*RAISLV Trigger: AACAAGGGATATCGCTCTGCACTTGAACCCACGCCT...AAAATATACTAATGGATGGCAAACACTACTTCCCCAGCAACCCTTTTCATAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | GATTATGAAAAGGGTTGCTGGGGAAGTAGTGTTTGCCATCCATTAGTATATTTTCCGTTCACAGCCACCTaGAATTTGTTCTTGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DYEKGCWGSSVCHPLVYFPFTAT*NLFLST Trigger: GGTGCTCAAGAACAAATTCCAGGTGGCTGTGAACGG...AAAATATACTAATGGATGGCAAACACTACTTCCCCAGCAACCCTTTTCATAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCATTTTGCAGTTTAGAGATAGAATTTCGGAATATACAACAGAAGGTCTCAATGGCAGGCTCAGCTaGAGCTTGCCTGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGILQFRDRISEYTTEGLNGRLS*SLPGFC Trigger: ACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATT...GAGACCTTCTGTTGTATATTCCGAAATTCTATCTCTAAACTGCAAAATGCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTGCTTTGATAGTGCTTGTTTTATATATACGTCCAAGAGGGTTTTACACCAACCTTGCTTCAAATaGCAGGCTCAGCTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WVCFDSACFIYTSKRVLHQPCFK*QAQLEL Trigger: AAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTG...GTGTAAAACCCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCCAACCTTGCTTCAAATaGCAGGCTCAGCTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKEVCLPSLLASICSILGQPCFK*QAQLEL Trigger: AAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTG...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCTTCGTCCAGGACCCATaGAGGCATTCAACCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKEVCLPSLLASICSILGFVQDP*RHSTLL Trigger: AAGCAAGGTTGAATGCCTCCATGGGTCCTGGACGAA...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS-3UTR CCA 90 bp | TGGGTTTGCTTTGATAGTGCTTGTTTTATATATACGTCCAAGAGGGTTTTACACTTCGTCCAGGACCCATaGAGGCATTCAACCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WVCFDSACFIYTSKRVLHFVQDP*RHSTLL Trigger: AAGCAAGGTTGAATGCCTCCATGGGTCCTGGACGAA...GTGTAAAACCCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| 3UTR CAA 72 bp | CAATCAACCAGCAGAAATCTGCTTGGAGCAGAACACTaGTTTTGTCATAATTCAGGGTTTTGGCCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSTSRNLLGAEH*FCHNSGFWPQF Trigger: AAACTGAGGCCAAAACCCTGAATTATGACAAAACAAGTGTTCTGCTCCAAGCAGATTTCTGCTGGTTGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCCAAATGCTTTCACATTaGGGCGTGGGTTCAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKEVCLPSLLASICSILGQMLSH*GVGSSA Trigger: TGCACTTGAACCCACGCCTCAATGTGAAAGCATTTG...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCTCTCCCCAGGCATCCTaGAGAAAGGAATTTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: TKEVCLPSLLASICSILGSPQAS*RKEFLT Trigger: TGTAAGAAATTCCTTTCTTCAGGATGCCTGGGGAGA...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| 3UTR CAA 72 bp | AATTTGCATGAAAATGAAGGACTAGCAGTTGCTGCCTaGAGTAAGACTGCTGATGGTATTATTTCATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLHENEGLAVAA*SKTADGIISYA Trigger: TGCATATGAAATAATACCATCAGCAGTCTTACTCAAGGCAGCAACTGCTAGTCCTTCATTTTCATGCAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS TCA 90 bp | TGTTCACTTTGCCGTAGATGCCCACTGTGTCGATCTGCTCCGGGCTaGTCCTGTGGGCGTACAGCAGAACATGCCTTCCGTTCACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSLCRRCPLCRSAPG*SCGRTAEHAFRSQP Trigger: TGGCTGTGAACGGAAGGCATGTTCTGCTGTACGCCCACAGGATCAGCCCGGAGCAGATCGACACAGTGGGCATCTACGGCAAAGTGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS-3UTR CAA 90 bp | CGCTGCTGCTGCAGACCGACATCTTCAGACCCAAAGGCACGAGGGCTAGTCTCCAGGCTCAGCTGGAGCTaGCCTGGCTTTTGTATATTC | + |
|
Preference number: 5 (lower is better) Translates to: RCCCRPTSSDPKARGLVSRLSWS*PGFCIF Trigger: GAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCT...GGAGACTAGCCCTCGTGCCTTTGGGTCTGAAGATGTCGGTCTGCAGCAGCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS GCA 90 bp | GTGTCGATCTGCTCCGGGCTGATCCTGTGGGCGTACAGCAGAACATaGCTTCCGTTCACAGCCACCTGGAATTTGTTCTTGAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: VSICSGLILWAYSRT*LPFTATWNLFLSTM Trigger: CATGGTGCTCAAGAACAAATTCCAGGTGGCTGTGAACGGAAGGCATGTTCTGCTGTACGCCCACAGGATCAGCCCGGAGCAGATCGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS-3UTR CAA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGAGGCCACGTCTGCTCTaGGCTTCAGGCTGTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSNFCLTLPQVPTHPGLERPRLL*ASGCCP Trigger: TGGGCAACAGCCTGAAGCCAAGAGCAGACGTGGCCT...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR CAA 90 bp | CGCTGCTGCTGCAGACCGACATCTTCAGACCCAAAGGCACGAGGGCTAGTCTCCACCTGGAATTTGTTCTaGAGCACCATGAACACGATC | + |
|
Preference number: 5 (lower is better) Translates to: RCCCRPTSSDPKARGLVSTWNLF*STMNTI Trigger: GATCGTGTTCATGGTGCTCAAGAACAAATTCCAGGT...GGAGACTAGCCCTCGTGCCTTTGGGTCTGAAGATGTCGGTCTGCAGCAGCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGCAGAATTCTGTCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACAAATGCTTTCACATaGAGGCGTGGGTTCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSRILSCGLMCLTSLLLQTNAFT*RRGFKC Trigger: GCACTTGAACCCACGCCTCAATGTGAAAGCATTTGT...CTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGACAGAATTCTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS CCA 90 bp | AACGGTTCGTCCAGGACCCATGGAGGCATTCAACCTTGCTTCAAATaGCAGGCTCAGCTGGAGCTTGCCTGGCTTTTGTATATTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NGSSRTHGGIQPCFK*QAQLELAWLLYILS Trigger: AGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCATGGGTCCTGGACGAACCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCAGAACAGCCACCTGGAATTaGTTCTTGAGCACCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCGLMCLTSLLLQTDIFRTATWN*FLSTMN Trigger: GTTCATGGTGCTCAAGAACAAATTCCAGGTGGCTGT...TCTGAAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | GAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCCACCCACCACACAAATGCTTTCACATaGAGGCGTGGGTTCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ENSRASWPPYKLPSSTHHTNAFT*RRGFKC Trigger: GCACTTGAACCCACGCCTCAATGTGAAAGCATTTGT...GTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCAGAACAAATGCTTTCACATaGAGGCGTGGGTTCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCGLMCLTSLLLQTDIFRTNAFT*RRGFKC Trigger: GCACTTGAACCCACGCCTCAATGTGAAAGCATTTGT...TCTGAAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS GCA 90 bp | TTTAATGACAACGGTTCGTCCAGGACCCATGGAGGCATTCAACCTTaGTTCAAATGGCAGGCTCAGCTGGAGCTTGCCTGGCTTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FNDNGSSRTHGGIQP*FKWQAQLELAWLLY Trigger: ATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCATGGGTCCTGGACGAACCGTTGTCATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAAAACATGGACCACACAAGTTCTGGGCCCTGCCATGTCTGTGCCCGGCTCGAGCTTGCCTGGCTTTaGTATATTCTCTCTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LENMDHTSSGPCHVCARLELAWL*YILSVY Trigger: ATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTC...GAGCCGGGCACAGACATGGCAGGGCCCAGAACTTGTGTGGTCCATGTTTTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGAGGCTCAGCTGGAGCTaGCCTGGCTTTTGTATATTC | + |
|
Preference number: 5 (lower is better) Translates to: LSNFCLTLPQVPTHPGLERLSWS*PGFCIF Trigger: GAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCT...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCAGATTAAAGCTTCGGGCATaGGTGTTCACTTCCCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SCGLMCLTSLLLQTDIFRLKLRA*VFTSPL Trigger: TAAAGGGGAAGTGAACACCAATGCCCGAAGCTTTAA...TCTGAAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS CCA 90 bp | GGCATTCAACCTTGCTTCAAATGGCAGGCTCAGCTGGAGCTTGCCTaGCTTTTGTATATTCTCTCTGTTTATCTGTGTCAGTCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GIQPCFKWQAQLELA*LLYILSVYLCQSQS Trigger: GCTCTGGGACTGACACAGATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTGAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
||
| CDS-3UTR CAA 90 bp | GACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTAGGCTCAGCTGGAGCTaGCCTGGCTTTTGTATATTC | + |
|
Preference number: 5 (lower is better) Translates to: DITLENSRASWPPYKLPSRLSWS*PGFCIF Trigger: GAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCT...ACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTGGACTTGAGCGCCAATCAACCAGCAGAAATCTGCTTGGAGCAGAACACTTTAAAGCTTCGGGCATaGGTGTTCACTTCCCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TLDLSANQPAEICLEQNTLKLRA*VFTSPL Trigger: TAAAGGGGAAGTGAACACCAATGCCCGAAGCTTTAA...AGTGTTCTGCTCCAAGCAGATTTCTGCTGGTTGATTGGCGCTCAAGTCCAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGGTTTAATGTGCCTGACCTCGCTGCTGCTGCAGACCGACATCTTCAGATCTTTAAATCTGTGTTaGTACTCCAGGCTGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SCGLMCLTSLLLQTDIFRSLNLC*YSRLCT Trigger: TGTGCACAGCCTGGAGTACAAACACAGATTTAAAGA...TCTGAAGATGTCGGTCTGCAGCAGCAGCGAGGTCAGGCACATTAAACCACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS GCA 90 bp | TGGAGGCATTCAACCTTGCTTCAAATGGCAGGCTCAGCTGGAGCTTaGCTGGCTTTTGTATATTCTCTCTGTTTATCTGTGTCAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WRHSTLLQMAGSAGA*LAFVYSLCLSVSVP Trigger: TGGGACTGACACAGATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
||
| CDS GCA 90 bp | CTCCTCTTCTCCCCAGGCATCCTGAAGAAAGGAATTTCTTACAAATaGTTTCACATTGAGGCGTGGGTTCAAGTGCAGAGCGATATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLFSPGILKKGISYK*FHIEAWVQVQSDIP Trigger: AGGGATATCGCTCTGCACTTGAACCCACGCCTCAATGTGAAAGCATTTGTAAGAAATTCCTTTCTTCAGGATGCCTGGGGAGAAGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
||
| CDS-3UTR CAA 90 bp | GAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCCACCCACCACGAGCTTGCCTGGCTTTaGTATATTCTCTCTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: ENSRASWPPYKLPSSTHHELAWL*YILSVY Trigger: ATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTC...GTGGTGGGTGGAACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCAGGCCACGTCTGCTCTaGGCTTCAGGCTGTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKEVCLPSLLASICSILGRPRLL*ASGCCP Trigger: TGGGCAACAGCCTGAAGCCAAGAGCAGACGTGGCCT...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTACACACACGGTTTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACAGCCACCTGGAATTaGTTCTTGAGCACCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VLHTRFIQLLPYFATGTHTATWN*FLSTMN Trigger: GTTCATGGTGCTCAAGAACAAATTCCAGGTGGCTGT...GTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TTACACACACGGTTTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACAACAGCCACCTGGAATTaGTTCTTGAGCACCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHTRFIQLLPYFATGTHTTATWN*FLSTMN Trigger: GTTCATGGTGCTCAAGAACAAATTCCAGGTGGCTGT...TGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS TCA 90 bp | CCCAGGCATCCTGAAGAAAGGAATTTCTTACAAATGCTTTCACATTaGGGCGTGGGTTCAAGTGCAGAGCGATATCCCTTGTTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRHPEERNFLQMLSH*GVGSSAERYPLFFL Trigger: CAGGAAAAACAAGGGATATCGCTCTGCACTTGAACCCACGCCTCAATGTGAAAGCATTTGTAAGAAATTCCTTTCTTCAGGATGCCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCATTTTGCAGTTTAGAGATAGAATTTCGGAATATACAACAGAAGGTCTCAGGCCACGTCTGCTCTaGGCTTCAGGCTGTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGILQFRDRISEYTTEGLRPRLL*ASGCCP Trigger: TGGGCAACAGCCTGAAGCCAAGAGCAGACGTGGCCT...GAGACCTTCTGTTGTATATTCCGAAATTCTATCTCTAAACTGCAAAATGCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 |
||
| CDS-3UTR CAA 90 bp | TTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACACCCTGGACTTGAGGAGCTTGCCTGGCTTTaGTATATTCTCTCTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LSNFCLTLPQVPTHPGLEELAWL*YILSVY Trigger: ATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTC...CTCAAGTCCAGGGTGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TTACACACACGGTTTATCCAACTTCTGCCTTACTTTGCCACAGGTACCCACACATTAAAGCTTCGGGCATaGGTGTTCACTTCCCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LHTRFIQLLPYFATGTHTLKLRA*VFTSPL Trigger: TAAAGGGGAAGTGAACACCAATGCCCGAAGCTTTAA...TGTGTGGGTACCTGTGGCAAAGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | AAACAATATGGTGAAAGCGAGATGCATTTGACATGGCCAGTACCGGATAAGCCAACAAATGCTTTCACATaGAGGCGTGGGTTCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQYGESEMHLTWPVPDKPTNAFT*RRGFKC Trigger: GCACTTGAACCCACGCCTCAATGTGAAAGCATTTGT...TGGCTTATCCGGTACTGGCCATGTCAAATGCATCTCGCTTTCACCATATTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS-3UTR CAA 90 bp | GACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTACCCAGTTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: DITLENSRASWPPYKLPSSLNLC*YSRLCT Trigger: TGTGCACAGCCTGGAGTACAAACACAGATTTAAAGA...ACTGGGTAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTTGGAGGCATTCAACCTaGCTTCAAATGGCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTWRHST*LQMAGS Trigger: TGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCA...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCTTGAGTAAGACTGCTGATGGTATTATTTCATATGCACAAGTGCATATATGGAGGCATTCAACCTaGCTTCAAATGGCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AALSKTADGIISYAQVHIWRHST*LQMAGS Trigger: TGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCA...TATATGCACTTGTGCATATGAAATAATACCATCAGCAGTCTTACTCAAGGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS-3UTR CAA 90 bp | TATGAAGACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTATTAAAGCTTCGGGCATaGGTGTTCACTTCCCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: YEDITLENSRASWPPYKLLKLRA*VFTSPL Trigger: TAAAGGGGAAGTGAACACCAATGCCCGAAGCTTTAA...TAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTCTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | AAACAATATGGTGAAAGCGAGATGCATTTGACATGGCCAGTACCGGATAAGCCATCTTTAAATCTGTGTTaGTACTCCAGGCTGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KQYGESEMHLTWPVPDKPSLNLC*YSRLCT Trigger: TGTGCACAGCCTGGAGTACAAACACAGATTTAAAGA...TGGCTTATCCGGTACTGGCCATGTCAAATGCATCTCGCTTTCACCATATTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
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| CDS GCA 90 bp | AAGGAATTTCTTACAAATGCTTTCACATTGAGGCGTGGGTTCAAGTaGAGAGCGATATCCCTTGTTTTTCCTGCCACTAGGTCAACATTA | + |
|
Preference number: 5 (lower is better) Translates to: KEFLTNAFTLRRGFK*RAISLVFPATRSTL Trigger: TAATGTTGACCTAGTGGCAGGAAAAACAAGGGATATCGCTCTGCACTTGAACCCACGCCTCAATGTGAAAGCATTTGTAAGAAATTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCAGGCTCAGCTGGAGCTaGCCTGGCTTTTGTATATTC | + |
|
Preference number: 5 (lower is better) Translates to: TKEVCLPSLLASICSILGRLSWS*PGFCIF Trigger: GAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCT...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | GATTATGAAAAGGGTTGCTGGGGAAGTAGTGTTTGCCATCCATTAGTATATTTTTGGAGGCATTCAACCTaGCTTCAAATGGCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DYEKGCWGSSVCHPLVYFWRHST*LQMAGS Trigger: TGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCA...AAAATATACTAATGGATGGCAAACACTACTTCCCCAGCAACCCTTTTCATAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCTGGAGGCATTCAACCTaGCTTCAAATGGCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TKEVCLPSLLASICSILGWRHST*LQMAGS Trigger: TGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCA...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TATATACGTCCAAGAGGGTTTTACACACACGGTTTATCCAACTTCTGCCTTACTTTAAAGCTTCGGGCATaGGTGTTCACTTCCCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: YIRPRGFYTHGLSNFCLTLKLRA*VFTSPL Trigger: TAAAGGGGAAGTGAACACCAATGCCCGAAGCTTTAA...AGTAAGGCAGAAGTTGGATAAACCGTGTGTGTAAAACCCTCTTGGACGTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGGAAGTATGCTTGCCATCCCTATTAGCTAGTATATGTAGTATATTAGGCACAGCCACCTGGAATTaGTTCTTGAGCACCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TKEVCLPSLLASICSILGTATWN*FLSTMN Trigger: GTTCATGGTGCTCAAGAACAAATTCCAGGTGGCTGT...GCCTAATATACTACATATACTAGCTAATAGGGATGGCAAGCATACTTCCTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TATGAAGACATAACTCTGGAGAATTCTAGAGCCTCCTGGCCTCCGTACAAATTAGAGCTTGCCTGGCTTTaGTATATTCTCTCTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: YEDITLENSRASWPPYKLELAWL*YILSVY Trigger: ATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTC...TAATTTGTACGGAGGCCAGGAGGCTCTAGAATTCTCCAGAGTTATGTCTTCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTTGCTTTGATAGTGCTTGTTTTATATATACGTCCAAGAGGGTTTTACACACCTGGAATTTGTTCTaGAGCACCATGAACACGATC | + |
|
Preference number: 5 (lower is better) Translates to: WVCFDSACFIYTSKRVLHTWNLF*STMNTI Trigger: GATCGTGTTCATGGTGCTCAAGAACAAATTCCAGGT...GTGTAAAACCCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTTGAGTAAGACTGCTGATGGTATTATTTCATATGCACAAGTGCATATATCTTTAAATCTGTGTTaGTACTCCAGGCTGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AALSKTADGIISYAQVHISLNLC*YSRLCT Trigger: TGTGCACAGCCTGGAGTACAAACACAGATTTAAAGA...TATATGCACTTGTGCATATGAAATAATACCATCAGCAGTCTTACTCAAGGCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTTTGCTTTGATAGTGCTTGTTTTATATATACGTCCAAGAGGGTTTTACACGAGCTTGCCTGGCTTTaGTATATTCTCTCTGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WVCFDSACFIYTSKRVLHELAWL*YILSVY Trigger: ATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTC...GTGTAAAACCCTCTTGGACGTATATATAAAACAAGCACTATCAAAGCAAACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 |
||
| CDS GCA 72 bp | AACGGTTCGTCCAGGACCCATGGAGGCATTCAACCTTaGTTCAAATGGCAGGCTCAGCTGGAGCTTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NGSSRTHGGIQP*FKWQAQLELAW Trigger: CCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCATGGGTCCTGGACGAACCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
||
| CDS GCA 72 bp | TGCTCCGGGCTGATCCTGTGGGCGTACAGCAGAACATaGCTTCCGTTCACAGCCACCTGGAATTTGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSGLILWAYSRT*LPFTATWNLFL Trigger: CAAGAACAAATTCCAGGTGGCTGTGAACGGAAGGCATGTTCTGCTGTACGCCCACAGGATCAGCCCGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
||
| CDS TCA 72 bp | GCCACGTCTGCTCTTGGCTTCAGGCTGTTGCCCAGCTaGAAGTCAACCTGGAATCTTTCTGAATCTTTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ATSALGFRLLPS*KSTWNLSESLG Trigger: CCCTAAAGATTCAGAAAGATTCCAGGTTGACTTTCAGCTGGGCAACAGCCTGAAGCCAAGAGCAGACGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000144283.2 |
||
| CDS GCA 72 bp | AGTGGAAGGCCACGTCTGCTCTTGGCTTCAGGCTGTTaGCCAGCTGAAAGTCAACCTGGAATCTTTCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SGRPRLLLASGC*PAESQPGIFLN Trigger: ATTCAGAAAGATTCCAGGTTGACTTTCAGCTGGGCAACAGCCTGAAGCCAAGAGCAGACGTGGCCTTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000144283.2 |
||
| CDS CCA 72 bp | GCGTACAGCAGAACATGCCTTCCGTTCACAGCCACCTaGAATTTGTTCTTGAGCACCATGAACACGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: AYSRTCLPFTAT*NLFLSTMNTIS Trigger: TGAGATCGTGTTCATGGTGCTCAAGAACAAATTCCAGGTGGCTGTGAACGGAAGGCATGTTCTGCTGTACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CAA 72 bp | ATGCCCACGGATTACAATCAGAGAGCCAGGCTTCAATaGCTCAGTAATGGTGCCAACATAGGGGATTATCGG | + |
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Preference number: 6 (lower is better) Translates to: MPTDYNQRARLQ*LSNGANIGDYR Trigger: CCGATAATCCCCTATGTTGGCACCATTACTGAGCAATTGAAGCCTGGCTCTCTGATTGTAATCCGTGGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000144283.2 |
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| CDS CAA 72 bp | AGCAGAACATGCCTTCCGTTCACAGCCACCTGGAATTaGTTCTTGAGCACCATGAACACGATCTCAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SRTCLPFTATWN*FLSTMNTISKD Trigger: GTCCTTTGAGATCGTGTTCATGGTGCTCAAGAACAAATTCCAGGTGGCTGTGAACGGAAGGCATGTTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CAA 90 bp | CAACCTTGCTTCAAATGGCAGGCTCAGCTGGAGCTTGCCTGGCTTTaGTATATTCTCTCTGTTTATCTGTGTCAGTCCCAGAGCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: QPCFKWQAQLELAWL*YILSVYLCQSQSRC Trigger: ACATCTGCTCTGGGACTGACACAGATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CAA 90 bp | ATGGAGGCATTCAACCTTGCTTCAAATGGCAGGCTCAGCTGGAGCTaGCCTGGCTTTTGTATATTCTCTCTGTTTATCTGTGTCAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: MEAFNLASNGRLSWS*PGFCIFSLFICVSP Trigger: GGGACTGACACAGATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CAA 90 bp | TGGGCGTACAGCAGAACATGCCTTCCGTTCACAGCCACCTGGAATTaGTTCTTGAGCACCATGAACACGATCTCAAAGGACTTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: WAYSRTCLPFTATWN*FLSTMNTISKDFSF Trigger: AAAAGAAAAGTCCTTTGAGATCGTGTTCATGGTGCTCAAGAACAAATTCCAGGTGGCTGTGAACGGAAGGCATGTTCTGCTGTACGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS TCA 72 bp | GCTGTTGCCCAGCTGAAAGTCAACCTGGAATCTTTCTaGATCTTTAGGGACATGCCCACGGATTACAATCAG | + |
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Preference number: 6 (lower is better) Translates to: AVAQLKVNLESF*IFRDMPTDYNQ Trigger: CTGATTGTAATCCGTGGGCATGTCCCTAAAGATTCAGAAAGATTCCAGGTTGACTTTCAGCTGGGCAACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000144283.2 |
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| CDS GCA 72 bp | CTTACAAATGCTTTCACATTGAGGCGTGGGTTCAAGTaGAGAGCGATATCCCTTGTTTTTCCTGCCACTAGG | + |
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Preference number: 6 (lower is better) Translates to: LTNAFTLRRGFK*RAISLVFPATR Trigger: CCTAGTGGCAGGAAAAACAAGGGATATCGCTCTGCACTTGAACCCACGCCTCAATGTGAAAGCATTTGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS GCA 72 bp | TCCCCAGGCATCCTGAAGAAAGGAATTTCTTACAAATaGTTTCACATTGAGGCGTGGGTTCAAGTGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPGILKKGISYK*FHIEAWVQVQS Trigger: GCTCTGCACTTGAACCCACGCCTCAATGTGAAAGCATTTGTAAGAAATTCCTTTCTTCAGGATGCCTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CCA 72 bp | CCTTGCTTCAAATGGCAGGCTCAGCTGGAGCTTGCCTaGCTTTTGTATATTCTCTCTGTTTATCTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PCFKWQAQLELA*LLYILSVYLCQ Trigger: CTGACACAGATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CCA 72 bp | GAGGCATTCAACCTTGCTTCAAATGGCAGGCTCAGCTaGAGCTTGCCTGGCTTTTGTATATTCTCTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: EAFNLASNGRLS*SLPGFCIFSLF Trigger: AAACAGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTGAATGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CAA 72 bp | TTCAAATGGCAGGCTCAGCTGGAGCTTGCCTGGCTTTaGTATATTCTCTCTGTTTATCTGTGTCAGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: FKWQAQLELAWL*YILSVYLCQSQ Trigger: CTGGGACTGACACAGATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CAA 90 bp | TTTAGGGACATGCCCACGGATTACAATCAGAGAGCCAGGCTTCAATaGCTCAGTAATGGTGCCAACATAGGGGATTATCGGGTTATAGAT | + |
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Preference number: 6 (lower is better) Translates to: FRDMPTDYNQRARLQ*LSNGANIGDYRVID Trigger: ATCTATAACCCGATAATCCCCTATGTTGGCACCATTACTGAGCAATTGAAGCCTGGCTCTCTGATTGTAATCCGTGGGCATGTCCCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000144283.2 |
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| CDS GCA 72 bp | AAGTCAACCTGGAATCTTTCTGAATCTTTAGGGACATaGCCACGGATTACAATCAGAGAGCCAGGCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: KSTWNLSESLGT*PRITIREPGFN Trigger: ATTGAAGCCTGGCTCTCTGATTGTAATCCGTGGGCATGTCCCTAAAGATTCAGAAAGATTCCAGGTTGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000144283.2 |
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| CDS CAA 72 bp | TTCAACCTTGCTTCAAATGGCAGGCTCAGCTGGAGCTaGCCTGGCTTTTGTATATTCTCTCTGTTTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: FNLASNGRLSWS*PGFCIFSLFIC Trigger: ACAGATAAACAGAGAGAATATACAAAAGCCAGGCAAGCTCCAGCTGAGCCTGCCATTTGAAGCAAGGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS GCA 72 bp | CTTAGGTCTTTAAATCTGTGTTTGTACTCCAGGCTGTaGACACCATTTATAGCAACCTTGAATTCCCGGACA | + |
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Preference number: 6 (lower is better) Translates to: LRSLNLCLYSRL*TPFIATLNSRT Trigger: TGTCCGGGAATTCAAGGTTGCTATAAATGGTGTGCACAGCCTGGAGTACAAACACAGATTTAAAGACCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CCA 72 bp | AAAGGAATTTCTTACAAATGCTTTCACATTGAGGCGTaGGTTCAAGTGCAGAGCGATATCCCTTGTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: KGISYKCFHIEA*VQVQSDIPCFS Trigger: GGAAAAACAAGGGATATCGCTCTGCACTTGAACCCACGCCTCAATGTGAAAGCATTTGTAAGAAATTCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CAA 90 bp | TCGACTGATAGTGTATCAATACTGCTTAGGTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGCACACCATTTATAGCAACCTTGAATTCC | + |
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Preference number: 6 (lower is better) Translates to: STDSVSILLRSLNLC*YSRLCTPFIATLNS Trigger: GGAATTCAAGGTTGCTATAAATGGTGTGCACAGCCTGGAGTACAAACACAGATTTAAAGACCTAAGCAGTATTGATACACTATCAGTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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| CDS CAA 72 bp | AGTGTATCAATACTGCTTAGGTCTTTAAATCTGTGTTaGTACTCCAGGCTGTGCACACCATTTATAGCAACC | + |
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Preference number: 6 (lower is better) Translates to: SVSILLRSLNLC*YSRLCTPFIAT Trigger: GGTTGCTATAAATGGTGTGCACAGCCTGGAGTACAAACACAGATTTAAAGACCTAAGCAGTATTGATACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000099820.10 ENSMUST00000099821.10 ENSMUST00000124888.8 ENSMUST00000135166.8 ENSMUST00000143693.8 ENSMUST00000144283.2 |
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