Pregenerated sensors for LGALS7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053522Ensembl transcript IDs: ENSMUST00000081457.5, ENSMUST00000138272.8
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAACCCTCCTCTGCGATCCTACACCCCCACCCCTACCCGCCACGCCCTTGGGTCCTTCCTCTGTGGCGATaGGGAGCACTTCAAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPSSAILHPHPYPPRPWVLPLWR*GALQRA Trigger: AGCCCTTTGAAGTGCTCCTCATCGCCACAGAGGAAG...GACCCAAGGGCGTGGCGGGTAGGGGTGGGGGTGTAGGATCGCAGAGGAGGGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR TCA 90 bp | AAACCCTCCTCTGCGATCCTACACCCCCACCCCTACCCGCCACGCCCTTGGGTCCTTGTTCTTTGGTGTTaGAGACAACCTCGGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPSSAILHPHPYPPRPWVLVLWC*RQPRKC Trigger: ACACTTCCGAGGTTGTCTTCAACACCAAAGAACAAG...GACCCAAGGGCGTGGCGGGTAGGGGTGGGGGTGTAGGATCGCAGAGGAGGGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR GCA 90 bp | CAGAACTACAGCTACACTTTATTCGCCATCCAAAACCCTCCTCTGCGATCCTACCACGCTCGAAGGGGATaGCGGTGCCTCGCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QNYSYTLFAIQNPPLRSYHARRG*RCLAPH Trigger: GTGAGGAGCGAGGCACCGGCATCCCCTTCGAGCGTG...GTAGGATCGCAGAGGAGGGTTTTGGATGGCGAATAAAGTGTAGCTGTAGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR TCA 90 bp | CAGAACTACAGCTACACTTTATTCGCCATCCAAAACCCTCCTCTGCGATCCTACCCCCGACCACAGCCTTaGAGCCTTCCTCTGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QNYSYTLFAIQNPPLRSYPRPQP*SLPLWR Trigger: TCGCCACAGAGGAAGGCTTCAAGGCTGTGGTCGGGG...GTAGGATCGCAGAGGAGGGTTTTGGATGGCGAATAAAGTGTAGCTGTAGTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR GCA 90 bp | CAGAACTACAGCTACACTTTATTCGCCATCCAAAACCCTCCTCTGCGATCCTACAGCCTCGGGTTAAAGTaGAAGGCGGCATCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNYSYTLFAIQNPPLRSYSLGLK*KAASAP Trigger: AGGAGCAGATGCCGCCTTGCACTTTAACCCGAGGCT...GTAGGATCGCAGAGGAGGGTTTTGGATGGCGAATAAAGTGTAGCTGTAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR CCA 90 bp | CAGAACTACAGCTACACTTTATTCGCCATCCAAAACCCTCCTCTGCGATCCTACCATAGCAGGTTTACATaGAACCTGCCAGCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNYSYTLFAIQNPPLRSYHSRFT*NLPAWS Trigger: TGACCAGGCTGGCAGGTTCCATGTAAACCTGCTATG...GTAGGATCGCAGAGGAGGGTTTTGGATGGCGAATAAAGTGTAGCTGTAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR CAA 90 bp | AAACCCTCCTCTGCGATCCTACACCCCCACCCCTACCCGCCACGCCCTTGGGTCACGGCCCCATTTGCCTaGTTCTTTGGTGTTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KPSSAILHPHPYPPRPWVTAPFA*FFGVED Trigger: GTCTTCAACACCAAAGAACAAGGCAAATGGGGCCGT...GACCCAAGGGCGTGGCGGGTAGGGGTGGGGGTGTAGGATCGCAGAGGAGGGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR CAA 90 bp | CAGAACTACAGCTACACTTTATTCGCCATCCAAAACCCTCCTCTGCGATCCTACTCCCCGACCACAGCCTaGAAGCCTTCCTCTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QNYSYTLFAIQNPPLRSYSPTTA*KPSSVA Trigger: CGCCACAGAGGAAGGCTTCAAGGCTGTGGTCGGGGA...GTAGGATCGCAGAGGAGGGTTTTGGATGGCGAATAAAGTGTAGCTGTAGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR CAA 90 bp | CAGAACTACAGCTACACTTTATTCGCCATCCAAAACCCTCCTCTGCGATCCTACTCCTCACGGCCCCATTaGCCTTGTTCTTTGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QNYSYTLFAIQNPPLRSYSSRPH*PCSLVL Trigger: CAACACCAAAGAACAAGGCAAATGGGGCCGTGAGGA...GTAGGATCGCAGAGGAGGGTTTTGGATGGCGAATAAAGTGTAGCTGTAGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS-3UTR CAA 90 bp | CAGAACTACAGCTACACTTTATTCGCCATCCAAAACCCTCCTCTGCGATCCTACCATTTGCCTTGTTCTTaGGTGTTGAAGACAACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QNYSYTLFAIQNPPLRSYHLPCS*VLKTTS Trigger: CGAGGTTGTCTTCAACACCAAAGAACAAGGCAAATG...GTAGGATCGCAGAGGAGGGTTTTGGATGGCGAATAAAGTGTAGCTGTAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081457.5 |
||
| CDS CAA 90 bp | GGGATGCCGGTGCCTCGCTCCTCACGGCCCCATTTGCCTTGTTCTTaGGTGTTGAAGACAACCTCGGAAGTGTCCAGCCTCGGGTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GMPVPRSSRPHLPCS*VLKTTSEVSSLGLK Trigger: CTTTAACCCGAGGCTGGACACTTCCGAGGTTGTCTTCAACACCAAAGAACAAGGCAAATGGGGCCGTGAGGAGCGAGGCACCGGCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081457.5 ENSMUST00000138272.8 |
||
| CDS CAA 90 bp | CCGGTGCCTCGCTCCTCACGGCCCCATTTGCCTTGTTCTTTGGTGTaGAAGACAACCTCGGAAGTGTCCAGCCTCGGGTTAAAGTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PVPRSSRPHLPCSLV*KTTSEVSSLGLKCK Trigger: CTTGCACTTTAACCCGAGGCTGGACACTTCCGAGGTTGTCTTCAACACCAAAGAACAAGGCAAATGGGGCCGTGAGGAGCGAGGCACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081457.5 ENSMUST00000138272.8 |
||
| CDS GCA 72 bp | AAGACAACCTCGGAAGTGTCCAGCCTCGGGTTAAAGTaGAAGGCGGCATCTGCTCCTTGCTCCTCACCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KTTSEVSSLGLK*KAASAPCSSPH Trigger: ATGCGGTGAGGAGCAAGGAGCAGATGCCGCCTTGCACTTTAACCCGAGGCTGGACACTTCCGAGGTTGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081457.5 ENSMUST00000138272.8 |
||
| CDS CAA 72 bp | GTGCCTCGCTCCTCACGGCCCCATTTGCCTTGTTCTTaGGTGTTGAAGACAACCTCGGAAGTGTCCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPRSSRPHLPCS*VLKTTSEVSSL Trigger: GAGGCTGGACACTTCCGAGGTTGTCTTCAACACCAAAGAACAAGGCAAATGGGGCCGTGAGGAGCGAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081457.5 ENSMUST00000138272.8 |
||
| CDS CAA 72 bp | GATGCCGGTGCCTCGCTCCTCACGGCCCCATTTGCCTaGTTCTTTGGTGTTGAAGACAACCTCGGAAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DAGASLLTAPFA*FFGVEDNLGSV Trigger: GACACTTCCGAGGTTGTCTTCAACACCAAAGAACAAGGCAAATGGGGCCGTGAGGAGCGAGGCACCGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081457.5 ENSMUST00000138272.8 |
||
| CDS CAA 72 bp | AAGGGGATGCCGGTGCCTCGCTCCTCACGGCCCCATTaGCCTTGTTCTTTGGTGTTGAAGACAACCTCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KGMPVPRSSRPH*PCSLVLKTTSE Trigger: TTCCGAGGTTGTCTTCAACACCAAAGAACAAGGCAAATGGGGCCGTGAGGAGCGAGGCACCGGCATCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081457.5 ENSMUST00000138272.8 |
||
| CDS CAA 72 bp | CGCTCCTCACGGCCCCATTTGCCTTGTTCTTTGGTGTaGAAGACAACCTCGGAAGTGTCCAGCCTCGGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RSSRPHLPCSLV*KTTSEVSSLGL Trigger: TAACCCGAGGCTGGACACTTCCGAGGTTGTCTTCAACACCAAAGAACAAGGCAAATGGGGCCGTGAGGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081457.5 ENSMUST00000138272.8 |
||