Pregenerated sensors for LGALS4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053964Ensembl transcript IDs: ENSMUST00000066723.15, ENSMUST00000151547.3, ENSMUST00000208971.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTAGGTGTAAAGCTATGTCTCCGGACGATCCCACCTTGAAGTTGATGACAAAGATAGTCCACCCTTTCTaGGCTCCCAGCATTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FRCKAMSPDDPTLKLMTKIVHPF*APSILC Trigger: GCAGAGAATGCTGGGAGCCCAGAAAGGGTGGACTAT...CTTTGTCATCAACTTCAAGGTGGGATCGTCCGGAGACATAGCTTTACACCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR GCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGTCCCGGATATGGGGCTaGAGCTGGTTGGCCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEESRIWG*SWLASE Trigger: CTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGA...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| CDS-3UTR GCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGGACCGGATATGGGGCTaGAGCTGGTTGGCCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEDRIWG*SWLASE Trigger: CTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGTC...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208971.2 |
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| CDS-3UTR GCA 90 bp | TCTCCGGACGATCCCACCTTGAAGTTGATGACAAAGTTCCTGGCTGTAGGAAGTTCCCGGATATGGGGCTaGAGCTGGTTGGCCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SPDDPTLKLMTKFLAVGSSRIWG*SWLASE Trigger: CTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGA...ACTTCCTACAGCCAGGAACTTTGTCATCAACTTCAAGGTGGGATCGTCCGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGGAGTCGGATTGTAGGTaGGCTGGTAGCCCGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEESDCR*AGSPVL Trigger: CAGCACCGGGCTACCAGCCCACCTACAATCCGACTC...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGGGGGCTGCAGCTGGTTaGCCTCCGAGGAAGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEGAAAG*PPRKLM Trigger: CATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCC...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR TCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGATGGCACACGCGGATTaGAGACTGGGGGTCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEMAHAD*RLGVLS Trigger: TGACAGGACCCCCAGTCTTCAATCCGCGTGTGCCAT...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGGACACTGAGGCCACCTaGGATGGGTCTCTTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEDTEAT*DGSLVG Trigger: CCCTACAAGAGACCCATCCCAGGTGGCCTCAGTGTC...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGCATGGCTCCCGGATATaGGGCTGCAGCTGGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEHGSRI*GCSWLA Trigger: GGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATG...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGTGTCATGACCGGATATaGGGCTGCAGCTGGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEECHDRI*GCSWLA Trigger: GGCCAACCAGCTGCAGCCCCATATCCGGTCATGACA...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGGGGCTGCAGCTGGTTaGCCTCCGAGGAAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEGAAAG*PPRKLM Trigger: CATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCC...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR TCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGATGGCACACGCGGATTaGAGACTGGGGGTCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEMAHAD*RLGVLS Trigger: TGACAGGACCCCCAGTCTTCAATCCGCGTGTGCCAT...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGACACTGAGGCCACCTaGGATGGGTCTCTTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEDTEAT*DGSLVG Trigger: CCCTACAAGAGACCCATCCCAGGTGGCCTCAGTGTC...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGCCATCCACTTGCAGATaGGTGACCATCTGTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEPSTCR*VTICTG Trigger: ACCTGTACAGATGGTCACCCATCTGCAAGTGGATGG...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | GACAAAGTTCCTGGCTGTAGGAAGTACATATCCCTTGATTATGATGGTTCTTCGCATGGCTCCCGGATATaGGGCTGCAGCTGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DKVPGCRKYISLDYDGSSHGSRI*GCSWLA Trigger: GGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATG...CGAAGAACCATCATAATCAAGGGATATGTACTTCCTACAGCCAGGAACTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR TCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGCCACTTGCAGATGGGTaGCCATCTGTACAGGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEPLADG*PSVQVT Trigger: GGTTACCTGTACAGATGGTCACCCATCTGCAAGTGG...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR TCA 90 bp | TGTAGGAAGTACATATCCCTTGATTATGATGGTTCTTCGGACTGTAAGGCCCCCCTGGGGGTCCTGTCATaGCAGGCAAGGTGTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: CRKYISLDYDGSSDCKAPLGVLS*QARCSS Trigger: AGATGAACACCTTGCCTGTCATGACAGGACCCCCAG...GGGGGCCTTACAGTCCGAAGAACCATCATAATCAAGGGATATGTACTTCCTACA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR CCA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCGAGTCGGATTGTAGGTaGGCTGGTAGCCCGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCESDCR*AGSPVL Trigger: CAGCACCGGGCTACCAGCCCACCTACAATCCGACTC...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| CDS-3UTR CCA 90 bp | TCCGGACGATCCCACCTTGAAGTTGATGACAAAGTTCCTGGCTGTAGGAAGTACCCATCCACTTGCAGATaGGTGACCATCTGTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: SGRSHLEVDDKVPGCRKYPSTCR*VTICTG Trigger: ACCTGTACAGATGGTCACCCATCTGCAAGTGGATGG...GTACTTCCTACAGCCAGGAACTTTGTCATCAACTTCAAGGTGGGATCGTCCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR GCA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGTCTTCTTCTCTTCCTTaGCCCATTGTCCACTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: IRSLDGTRGSFCFLPQEESSSLP*PIVHFA Trigger: TGCAAAGTGGACAATGGGGCAAGGAAGAGAAGAAGA...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR GCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGACAGATCAAAGAACTaGCCAGGGCCAAATGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEDRSKN*PGPNGL Trigger: CAACCCATTTGGCCCTGGGCAGTTCTTTGATCTGTC...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGCCATCCACTTGCAGATaGGTGACCATCTGTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEPSTCR*VTICTG Trigger: ACCTGTACAGATGGTCACCCATCTGCAAGTGGATGG...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR CCA 90 bp | ACCTTGAAGTTGATGACAAAGTTCCTGGCTGTAGGAAGTACATATCCCTTGATTGGGGCTGCAGCTGGTTaGCCTCCGAGGAAGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLKLMTKFLAVGSTYPLIGAAAG*PPRKLM Trigger: CATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCC...AATCAAGGGATATGTACTTCCTACAGCCAGGAACTTTGTCATCAACTTCAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR TCA 90 bp | TTTAGGTGTAAAGCTATGTCTCCGGACGATCCCACCTTGAAGTTGATGACAAAGAGGAAGTTGATGGACTaGAGTTCCAGGTCCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: FRCKAMSPDDPTLKLMTKRKLMD*SSRSPS Trigger: GGATGGGGACCTGGAACTTCAGTCCATCAACTTCCT...CTTTGTCATCAACTTCAAGGTGGGATCGTCCGGAGACATAGCTTTACACCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR TCA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCCTGGGGGTCCTGTCATaGCAGGCAAGGTGTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCLGVLS*QARCSS Trigger: AGATGAACACCTTGCCTGTCATGACAGGACCCCCAG...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| CDS-3UTR TCA 90 bp | GACAAAGTTCCTGGCTGTAGGAAGTACATATCCCTTGATTATGATGGTTCTTCGGACACCATACCGGATTaGAGACTGGGGGTCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: DKVPGCRKYISLDYDGSSDTIPD*RLGVLS Trigger: TGACAGGACCCCCAGTCTTCAATCCGGTATGGTGTC...CGAAGAACCATCATAATCAAGGGATATGTACTTCCTACAGCCAGGAACTTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR CCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGAAGTCGAAAAGGTGCTaGCCATTGGCAAACACCTTG | + |
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Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEKSKRC*PLANTL Trigger: CAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTT...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR TCA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCCCACTTGCAGATGGGTaGCCATCTGTACAGGTAACC | + |
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Preference number: 4 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCPLADG*PSVQVT Trigger: GGTTACCTGTACAGATGGTCACCCATCTGCAAGTGG...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| CDS-3UTR TCA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCAGGAAGTTGATGGACTaGAGTTCCAGGTCCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCRKLMD*SSRSPS Trigger: GGATGGGGACCTGGAACTTCAGTCCATCAACTTCCT...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| CDS-3UTR GCA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGCCTTCTGGAAAGGCATaGTCTTCTTCTTCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEPSGKA*SSSSLP Trigger: AGGAAGAGAAGAAGAAGAGCATGCCTTTCCAGAAGG...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS-3UTR GCA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCAGGTCCCCATCCACTTaGAGATGGGTGACCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCRSPST*RWVTIC Trigger: ACAGATGGTCACCCATCTGCAAGTGGATGGGGACCT...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| CDS-3UTR TCA 90 bp | ACCTTGAAGTTGATGACAAAGTTCCTGGCTGTAGGAAGTACATATCCCTTGATTCCACTTGCAGATGGGTaGCCATCTGTACAGGTAACC | + |
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Preference number: 4 (lower is better) Translates to: TLKLMTKFLAVGSTYPLIPLADG*PSVQVT Trigger: GGTTACCTGTACAGATGGTCACCCATCTGCAAGTGG...AATCAAGGGATATGTACTTCCTACAGCCAGGAACTTTGTCATCAACTTCAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR GCA 90 bp | TGTAGGAAGTACATATCCCTTGATTATGATGGTTCTTCGGACTGTAAGGCCCCCTCTTCTTCTCTTCCTTaGCCCATTGTCCACTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: CRKYISLDYDGSSDCKAPSSSLP*PIVHFA Trigger: TGCAAAGTGGACAATGGGGCAAGGAAGAGAAGAAGA...GGGGGCCTTACAGTCCGAAGAACCATCATAATCAAGGGATATGTACTTCCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR GCA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCGACAGATCAAAGAACTaGCCAGGGCCAAATGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCDRSKN*PGPNGL Trigger: CAACCCATTTGGCCCTGGGCAGTTCTTTGATCTGTC...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| 3UTR CAA 72 bp | TTTAGGTGTAAAGCTATGTCTCCGGACGATCCCACCTaGAAGTTGATGACAAAGTTCCTGGCTGTAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: FRCKAMSPDDPT*KLMTKFLAVGS Trigger: ACTTCCTACAGCCAGGAACTTTGTCATCAACTTCAAGGTGGGATCGTCCGGAGACATAGCTTTACACCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS-3UTR CCA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCAAGTGCTTGCCCTTCTaGAAAGGCATGCTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCKCLPF*KGMLFF Trigger: GAAGAAGAGCATGCCTTTCCAGAAGGGCAAGCACTT...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
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| CDS-3UTR GCA 90 bp | GACAAAGTTCCTGGCTGTAGGAAGTACATATCCCTTGATTATGATGGTTCTTCGCCTTCTGGAAAGGCATaGTCTTCTTCTTCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: DKVPGCRKYISLDYDGSSPSGKA*SSSSLP Trigger: AGGAAGAGAAGAAGAAGAGCATGCCTTTCCAGAAGG...CGAAGAACCATCATAATCAAGGGATATGTACTTCCTACAGCCAGGAACTTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
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| CDS CCA 90 bp | GTTCATCTGTGGAGGGTTGTACCCAGGACTCCCAGCAGGGTAAGCTaGAATAGTCATGGCTCCCGGATATGGGGCTGCAGCTGGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: VHLWRVVPRTPSRVS*NSHGSRIWGCSWLA Trigger: GGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATGACTATTCCAGCTTACCCTGCTGGGAGTCCTGGGTACAACCCTCCACAGATGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
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| CDS CCA 90 bp | TGGCACACGCGGATTGAAGACTGGGGGTCCTGTCATGACCGGATATaGGGCTGCAGCTGGTTGGCCTCCGAGGAAGTTGATGGACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: WHTRIEDWGSCHDRI*GCSWLASEEVDGLK Trigger: CTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGTCATGACAGGACCCCCAGTCTTCAATCCGCGTGTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208971.2 |
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| CDS GCA 90 bp | CCCAGCAGGGTAAGCTGGAATAGTCATGGCTCCCGGATATGGGGCTaGAGCTGGTTGGCCTCCGAGGAAGTTGATGGACTGAAGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PSRVSWNSHGSRIWG*SWLASEEVDGLKFQ Trigger: CTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATGACTATTCCAGCTTACCCTGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
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| CDS GCA 90 bp | ACGCGGATTGAAGACTGGGGGTCCTGTCATGACCGGATATGGGGCTaGAGCTGGTTGGCCTCCGAGGAAGTTGATGGACTGAAGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: TRIEDWGSCHDRIWG*SWLASEEVDGLKFQ Trigger: CTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGTCATGACAGGACCCCCAGTCTTCAATCCGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208971.2 |
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| CDS CCA 90 bp | GGCCATTCCTTGGATGTAAACGGACATCCCGACACTGAGGCCACCTaGGATGGGTCTCTTGTAGGGCAGAGTCGGATTGTAGGTGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GHSLDVNGHPDTEAT*DGSLVGQSRIVGGL Trigger: CAGCCCACCTACAATCCGACTCTGCCCTACAAGAGACCCATCCCAGGTGGCCTCAGTGTCGGGATGTCCGTTTACATCCAAGGAATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CCA 90 bp | AGGGTAAGCTGGAATAGTCATGGCTCCCGGATATGGGGCTGCAGCTaGTTGGCCTCCGAGGAAGTTGATGGACTGAAGTTCCAGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: RVSWNSHGSRIWGCS*LASEEVDGLKFQVP Trigger: GGGGACCTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATGACTATTCCAGCTTACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
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| CDS CCA 90 bp | AGGACTCCCAGCAGGGTAAGCTGGAATAGTCATGGCTCCCGGATATaGGGCTGCAGCTGGTTGGCCTCCGAGGAAGTTGATGGACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: RTPSRVSWNSHGSRI*GCSWLASEEVDGLK Trigger: CTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATGACTATTCCAGCTTACCCTGCTGGGAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
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| CDS CCA 90 bp | ATTGAAGACTGGGGGTCCTGTCATGACCGGATATGGGGCTGCAGCTaGTTGGCCTCCGAGGAAGTTGATGGACTGAAGTTCCAGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: IEDWGSCHDRIWGCS*LASEEVDGLKFQVP Trigger: GGGGACCTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGTCATGACAGGACCCCCAGTCTTCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208971.2 |
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| CDS TCA 90 bp | GGATATGGGGCTGCAGCTGGTTGGCCTCCGAGGAAGTTGATGGACTaGAGTTCCAGGTCCCCATCCACTTGCAGATGGGTGACCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GYGAAAGWPPRKLMD*SSRSPSTCRWVTIC Trigger: ACAGATGGTCACCCATCTGCAAGTGGATGGGGACCTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 ENSMUST00000208971.2 |
||
| CDS TCA 90 bp | TGTTCTCTTTGGCCATTCCTTGGATGTAAACGGACATCCCGACACTaGGGCCACCTGGGATGGGTCTCTTGTAGGGCAGAGTCGGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CSLWPFLGCKRTSRH*GHLGWVSCRAESDC Trigger: ACAATCCGACTCTGCCCTACAAGAGACCCATCCCAGGTGGCCTCAGTGTCGGGATGTCCGTTTACATCCAAGGAATGGCCAAAGAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS GCA 90 bp | TCAAAGCGGGGATTGAAGTGGAAAGCAACATCCGCCCCATCATCCTaGCCCACAGCGAAGTTCACGTGGAACCGTCTCATGTTCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKRGLKWKATSAPSS*PTAKFTWNRLMFSL Trigger: CAAAGAGAACATGAGACGGTTCCACGTGAACTTCGCTGTGGGGCAGGATGATGGGGCGGATGTTGCTTTCCACTTCAATCCCCGCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGGTGTTGAAGACCACCTaGTCCCAGCCATCAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEVLKTT*SQPSKR Trigger: CCGCTTTGATGGCTGGGACAAGGTGGTCTTCAACAC...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGCCATGCCGCAGCGGATaGACAGATCAAAGAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEPCRSG*TDQRTA Trigger: GGCAGTTCTTTGATCTGTCAATCCGCTGCGGCATGG...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS TCA 90 bp | ACCGATGGGAGAAGTCGAAAAGGTGCTGGCCATTGGCAAACACCTTaGATCGATCCATGCCGCAGCGGATTGACAGATCAAAGAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TDGRSRKGAGHWQTP*IDPCRSGLTDQRTA Trigger: GGCAGTTCTTTGATCTGTCAATCCGCTGCGGCATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS GCA 90 bp | TCTACCATTTGGAATGCTTGGAACCGATGGGAGAAGTCGAAAAGGTaGTGGCCATTGGCAAACACCTTGAATCGATCCATGCCGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: STIWNAWNRWEKSKR*WPLANTLNRSMPQR Trigger: CCGCTGCGGCATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | ACATATGGCACACGATATAGTCCACCCTTTCTGGGCTCCCAGCATTCTCTGCCTCCACTTTGCATCGTGTaGAAGACCACCTTGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TYGTRYSPPFLGSQHSLPPLCIV*KTTLSQ Trigger: CTGGGACAAGGTGGTCTTCAACACGATGCAAAGTGG...AGGCAGAGAATGCTGGGAGCCCAGAAAGGGTGGACTATATCGTGTGCCATATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGCCACTTTGCATCGTGTaGAAGACCACCTTGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEPLCIV*KTTLSQ Trigger: CTGGGACAAGGTGGTCTTCAACACGATGCAAAGTGG...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCACACGATATAGTCCACCCTTTCTGGGCTCCCAGCATTCTCTGCCTCCTCTCTTCCTTGCCCCATaGTCCACTTTGCATCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YGTRYSPPFLGSQHSLPPLFLAP*STLHRV Trigger: AACACGATGCAAAGTGGACAATGGGGCAAGGAAGAG...AGGAGGCAGAGAATGCTGGGAGCCCAGAAAGGGTGGACTATATCGTGTGCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGCAGGTCCCCATCCACTaGCAGATGGGTGACCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEQVPIH*QMGDHL Trigger: CAGATGGTCACCCATCTGCAAGTGGATGGGGACCTG...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS GCA 90 bp | CAAGGTGATGTCACCATTGATCTCCAGCGTGTCTACCATTTGGAATaGTTGGAACCGATGGGAGAAGTCGAAAAGGTGCTGGCCATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGDVTIDLQRVYHLE*LEPMGEVEKVLAIG Trigger: GCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGGTGACATCACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGCTCTTTGGCCATTCCTaGGATGTAAACGGACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEELFGHS*DVNGHP Trigger: GGGATGTCCGTTTACATCCAAGGAATGGCCAAAGAG...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGCTCTTCCTTGCCCCATaGTCCACTTTGCATCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEELFLAP*STLHRV Trigger: AACACGATGCAAAGTGGACAATGGGGCAAGGAAGAG...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGTTCATCTGTGGAGGGTaGTACCCAGGACTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEFICGG*YPGLPA Trigger: TGCTGGGAGTCCTGGGTACAACCCTCCACAGATGAA...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGCCGGACGATCCCACCTaGAAGTTGATGACAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEPDDPT*KLMTKF Trigger: GAACTTTGTCATCAACTTCAAGGTGGGATCGTCCGG...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGCAGCGTGTCTACCATTaGGAATGCTTGGAACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEQRVYH*ECLEPM Trigger: CATCGGTTCCAAGCATTCCAAATGGTAGACACGCTG...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS CCA 90 bp | GTGATGTCACCATTGATCTCCAGCGTGTCTACCATTTGGAATGCTTaGAACCGATGGGAGAAGTCGAAAAGGTGCTGGCCATTGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VMSPLISSVSTIWNA*NRWEKSKRCWPLAN Trigger: GTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGGTGACATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGAAAAGGTGCTGGCCATaGGCAAACACCTTGAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEKRCWP*ANTLNR Trigger: TCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTT...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS CCA 90 bp | CCATTGATCTCCAGCGTGTCTACCATTTGGAATGCTTGGAACCGATaGGAGAAGTCGAAAAGGTGCTGGCCATTGGCAAACACCTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLISSVSTIWNAWNR*EKSKRCWPLANTLN Trigger: ATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGGTGTAAAGCTATGTCTCCGGACGATCCCACCTTGAAGTTGATGACAAAGGTGTTGAAGACCACCTaGTCCCAGCCATCAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FRCKAMSPDDPTLKLMTKVLKTT*SQPSKR Trigger: CCGCTTTGATGGCTGGGACAAGGTGGTCTTCAACAC...CTTTGTCATCAACTTCAAGGTGGGATCGTCCGGAGACATAGCTTTACACCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGCTCTTCCTTGCCCCATaGTCCACTTTGCATCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FIRSLDGTRGSFCFLPQELFLAP*STLHRV Trigger: AACACGATGCAAAGTGGACAATGGGGCAAGGAAGAG...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCCAGGTCCCCATCCACTaGCAGATGGGTGACCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCQVPIH*QMGDHL Trigger: CAGATGGTCACCCATCTGCAAGTGGATGGGGACCTG...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGCCGGACGATCCCACCTaGAAGTTGATGACAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEPDDPT*KLMTKF Trigger: GAACTTTGTCATCAACTTCAAGGTGGGATCGTCCGG...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCGTGTTGAAGACCACCTaGTCCCAGCCATCAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCVLKTT*SQPSKR Trigger: CCGCTTTGATGGCTGGGACAAGGTGGTCTTCAACAC...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
||
| CDS-3UTR CAA 90 bp | ACCTTGAAGTTGATGACAAAGTTCCTGGCTGTAGGAAGTACATATCCCTTGATTCAGGTCCCCATCCACTaGCAGATGGGTGACCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLKLMTKFLAVGSTYPLIQVPIH*QMGDHL Trigger: CAGATGGTCACCCATCTGCAAGTGGATGGGGACCTG...AATCAAGGGATATGTACTTCCTACAGCCAGGAACTTTGTCATCAACTTCAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
||
| CDS-3UTR CAA 90 bp | ATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGAGGGAAGTACATATCCCTaGATTATGATGGTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: IRSLDGTRGSFCFLPQEEGSTYP*IMMVLR Trigger: CCGAAGAACCATCATAATCAAGGGATATGTACTTCC...CTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCTTCCTTCCCCAGGAGGATCCCACCTTGAAGTaGATGACAAAGTTCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FIRSLDGTRGSFCFLPQEDPTLK*MTKFLA Trigger: AGCCAGGAACTTTGTCATCAACTTCAAGGTGGGATC...CTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS-3UTR CAA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCCCACTTTGCATCGTGTaGAAGACCACCTTGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCPLCIV*KTTLSQ Trigger: CTGGGACAAGGTGGTCTTCAACACGATGCAAAGTGG...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
||
| CDS-3UTR CAA 90 bp | GATGACAAAGTTCCTGGCTGTAGGAAGTACATATCCCTTGATTATGATGGTTCTTTCATCTGTGGAGGGTaGTACCCAGGACTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DDKVPGCRKYISLDYDGSFICGG*YPGLPA Trigger: TGCTGGGAGTCCTGGGTACAACCCTCCACAGATGAA...AGAACCATCATAATCAAGGGATATGTACTTCCTACAGCCAGGAACTTTGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151547.3 |
||
| CDS-3UTR CAA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCCTCTTTGGCCATTCCTaGGATGTAAACGGACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCLFGHS*DVNGHP Trigger: GGGATGTCCGTTTACATCCAAGGAATGGCCAAAGAG...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
||
| CDS-3UTR CAA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCCAGCGTGTCTACCATTaGGAATGCTTGGAACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCQRVYH*ECLEPM Trigger: CATCGGTTCCAAGCATTCCAAATGGTAGACACGCTG...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
||
| CDS-3UTR CAA 90 bp | AGACTCCTTCAACATTTTATTAGGAGCTTAGATGGAACTCGGGGATCTTTCTGCGGAAGTACATATCCCTaGATTATGATGGTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLQHFIRSLDGTRGSFCGSTYP*IMMVLR Trigger: CCGAAGAACCATCATAATCAAGGGATATGTACTTCC...GCAGAAAGATCCCCGAGTTCCATCTAAGCTCCTAATAAAATGTTGAAGGAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
||
| CDS GCA 72 bp | GAAGACTGGGGGTCCTGTCATGACCGGATATGGGGCTaGAGCTGGTTGGCCTCCGAGGAAGTTGATGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: EDWGSCHDRIWG*SWLASEEVDGL Trigger: CAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGTCATGACAGGACCCCCAGTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208971.2 |
||
| CDS CCA 72 bp | TGGAGGGTTGTACCCAGGACTCCCAGCAGGGTAAGCTaGAATAGTCATGGCTCCCGGATATGGGGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WRVVPRTPSRVS*NSHGSRIWGCS Trigger: GCTGCAGCCCCATATCCGGGAGCCATGACTATTCCAGCTTACCCTGCTGGGAGTCCTGGGTACAACCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
||
| CDS TCA 72 bp | GCTGCAGCTGGTTGGCCTCCGAGGAAGTTGATGGACTaGAGTTCCAGGTCCCCATCCACTTGCAGATGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AAAGWPPRKLMD*SSRSPSTCRWV Trigger: CACCCATCTGCAAGTGGATGGGGACCTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 ENSMUST00000208971.2 |
||
| CDS CCA 72 bp | TGGGGGTCCTGTCATGACAGGCAAGGTGTTCATCTGTaGAGGGTTGTACCCAGGACTCCCAGCAGGGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: WGSCHDRQGVHL*RVVPRTPSRVS Trigger: GCTTACCCTGCTGGGAGTCCTGGGTACAACCCTCCACAGATGAACACCTTGCCTGTCATGACAGGACCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
||
| CDS CCA 72 bp | TGGGGGTCCTGTCATGACCGGATATGGGGCTGCAGCTaGTTGGCCTCCGAGGAAGTTGATGGACTGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WGSCHDRIWGCS*LASEEVDGLKF Trigger: GAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGTCATGACAGGACCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208971.2 |
||
| CDS CAA 72 bp | GGGTCCTGTCATGACCGGATATGGGGCTGCAGCTGGTaGGCCTCCGAGGAAGTTGATGGACTGAAGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSCHDRIWGCSW*ASEEVDGLKFQ Trigger: CTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGTCATGACAGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208971.2 |
||
| CDS CAA 90 bp | GTAAGCTGGAATAGTCATGGCTCCCGGATATGGGGCTGCAGCTGGTaGGCCTCCGAGGAAGTTGATGGACTGAAGTTCCAGGTCCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: VSWNSHGSRIWGCSW*ASEEVDGLKFQVPI Trigger: GATGGGGACCTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATGACTATTCCAGCTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
||
| CDS TCA 72 bp | TGGCCATTCCTTGGATGTAAACGGACATCCCGACACTaGGGCCACCTGGGATGGGTCTCTTGTAGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WPFLGCKRTSRH*GHLGWVSCRAE Trigger: CTCTGCCCTACAAGAGACCCATCCCAGGTGGCCTCAGTGTCGGGATGTCCGTTTACATCCAAGGAATGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
||
| CDS GCA 72 bp | GTAAGCTGGAATAGTCATGGCTCCCGGATATGGGGCTaGAGCTGGTTGGCCTCCGAGGAAGTTGATGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: VSWNSHGSRIWG*SWLASEEVDGL Trigger: CAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATGACTATTCCAGCTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
||
| CDS CCA 72 bp | CAGAGCCCCCACATATGGCACACGCGGATTGAAGACTaGGGGTCCTGTCATGACAGGCAAGGTGTTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: QSPHIWHTRIED*GSCHDRQGVHL Trigger: CAGATGAACACCTTGCCTGTCATGACAGGACCCCCAGTCTTCAATCCGCGTGTGCCATATGTGGGGGCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066723.15 |
||
| CDS GCA 72 bp | GGATTGAAGTGGAAAGCAACATCCGCCCCATCATCCTaGCCCACAGCGAAGTTCACGTGGAACCGTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GLKWKATSAPSS*PTAKFTWNRLM Trigger: CATGAGACGGTTCCACGTGAACTTCGCTGTGGGGCAGGATGATGGGGCGGATGTTGCTTTCCACTTCAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 ENSMUST00000208971.2 |
||
| CDS CCA 72 bp | TGGAATAGTCATGGCTCCCGGATATGGGGCTGCAGCTaGTTGGCCTCCGAGGAAGTTGATGGACTGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WNSHGSRIWGCS*LASEEVDGLKF Trigger: GAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATGACTATTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
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| CDS CAA 72 bp | AATAGTCATGGCTCCCGGATATGGGGCTGCAGCTGGTaGGCCTCCGAGGAAGTTGATGGACTGAAGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: NSHGSRIWGCSW*ASEEVDGLKFQ Trigger: CTGGAACTTCAGTCCATCAACTTCCTCGGAGGCCAACCAGCTGCAGCCCCATATCCGGGAGCCATGACTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 |
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| CDS CAA 72 bp | TGGAACCGATGGGAGAAGTCGAAAAGGTGCTGGCCATaGGCAAACACCTTGAATCGATCCATGCCGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: WNRWEKSKRCWP*ANTLNRSMPQR Trigger: CCGCTGCGGCATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CCA 72 bp | TTGGATGTAAACGGACATCCCGACACTGAGGCCACCTaGGATGGGTCTCTTGTAGGGCAGAGTCGGATTGTA | + |
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Preference number: 6 (lower is better) Translates to: LDVNGHPDTEAT*DGSLVGQSRIV Trigger: TACAATCCGACTCTGCCCTACAAGAGACCCATCCCAGGTGGCCTCAGTGTCGGGATGTCCGTTTACATCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CAA 90 bp | GCCACCTTCCTCTCTTCAGCGCCCCAAGAGCCATTCATAAAGCTGTaGCGAACCACACTGTCACCTATGCGGGGGTTTAGGTGTAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: ATFLSSAPQEPFIKL*RTTLSPMRGFRCKA Trigger: AGCTTTACACCTAAACCCCCGCATAGGTGACAGTGTGGTTCGCAACAGCTTTATGAATGGCTCTTGGGGCGCTGAAGAGAGGAAGGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS TCA 72 bp | TCTCTTCCTTGCCCCATTGTCCACTTTGCATCGTGTTaGAGACCACCTTGTCCCAGCCATCAAAGCGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SLPCPIVHFASC*RPPCPSHQSGD Trigger: ATCCCCGCTTTGATGGCTGGGACAAGGTGGTCTTCAACACGATGCAAAGTGGACAATGGGGCAAGGAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 ENSMUST00000208971.2 |
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| CDS TCA 72 bp | GGCAAACACCTTGAATCGATCCATGCCGCAGCGGATTaGCAGATCAAAGAACTGCCCAGGGCCAAATGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GKHLESIHAAAD*QIKELPRAKWV Trigger: AACCCATTTGGCCCTGGGCAGTTCTTTGATCTGTCAATCCGCTGCGGCATGGATCGATTCAAGGTGTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CAA 72 bp | TTCTCTTCCTTGCCCCATTGTCCACTTTGCATCGTGTaGAAGACCACCTTGTCCCAGCCATCAAAGCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: FSSLPHCPLCIV*KTTLSQPSKRG Trigger: TCCCCGCTTTGATGGCTGGGACAAGGTGGTCTTCAACACGATGCAAAGTGGACAATGGGGCAAGGAAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 ENSMUST00000208971.2 |
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| CDS CAA 90 bp | TGGAATGCTTGGAACCGATGGGAGAAGTCGAAAAGGTGCTGGCCATaGGCAAACACCTTGAATCGATCCATGCCGCAGCGGATTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: WNAWNRWEKSKRCWP*ANTLNRSMPQRIDR Trigger: TCTGTCAATCCGCTGCGGCATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CAA 90 bp | AACCGATGGGAGAAGTCGAAAAGGTGCTGGCCATTGGCAAACACCTaGAATCGATCCATGCCGCAGCGGATTGACAGATCAAAGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: NRWEKSKRCWPLANT*NRSMPQRIDRSKNC Trigger: GCAGTTCTTTGATCTGTCAATCCGCTGCGGCATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CAA 90 bp | GTAGGACAAGGTGATGTCACCATTGATCTCCAGCGTGTCTACCATTaGGAATGCTTGGAACCGATGGGAGAAGTCGAAAAGGTGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VGQGDVTIDLQRVYH*ECLEPMGEVEKVLA Trigger: GGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGGTGACATCACCTTGTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CCA 72 bp | CAGCGAAGTTCACGTGGAACCGTCTCATGTTCTCTTTaGCCATTCCTTGGATGTAAACGGACATCCCGACAC | + |
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Preference number: 6 (lower is better) Translates to: QRSSRGTVSCSL*PFLGCKRTSRH Trigger: GTGTCGGGATGTCCGTTTACATCCAAGGAATGGCCAAAGAGAACATGAGACGGTTCCACGTGAACTTCGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CCA 72 bp | AATGCTTGGAACCGATGGGAGAAGTCGAAAAGGTGCTaGCCATTGGCAAACACCTTGAATCGATCCATGCCG | + |
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Preference number: 6 (lower is better) Translates to: NAWNRWEKSKRC*PLANTLNRSMP Trigger: CGGCATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CCA 72 bp | TCCAGCGTGTCTACCATTTGGAATGCTTGGAACCGATaGGAGAAGTCGAAAAGGTGCTGGCCATTGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SSVSTIWNAWNR*EKSKRCWPLAN Trigger: GTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CCA 72 bp | CCATTGATCTCCAGCGTGTCTACCATTTGGAATGCTTaGAACCGATGGGAGAAGTCGAAAAGGTGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PLISSVSTIWNA*NRWEKSKRCWP Trigger: TGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CAA 72 bp | TGCTCAGGCATGACCATGAACACCAGCTCGAAGTGCTaGCCCTTCTGGAAAGGCATGCTCTTCTTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CSGMTMNTSSKC*PFWKGMLFFFS Trigger: AGAGAAGAAGAAGAGCATGCCTTTCCAGAAGGGCAAGCACTTCGAGCTGGTGTTCATGGTCATGCCTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066723.15 ENSMUST00000151547.3 ENSMUST00000208971.2 |
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| CDS CAA 72 bp | GAGAAGTCGAAAAGGTGCTGGCCATTGGCAAACACCTaGAATCGATCCATGCCGCAGCGGATTGACAGATCA | + |
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Preference number: 6 (lower is better) Translates to: EKSKRCWPLANT*NRSMPQRIDRS Trigger: TGATCTGTCAATCCGCTGCGGCATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CAA 72 bp | ACCATTGATCTCCAGCGTGTCTACCATTTGGAATGCTaGGAACCGATGGGAGAAGTCGAAAAGGTGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TIDLQRVYHLEC*EPMGEVEKVLA Trigger: GGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CAA 90 bp | GGTGATGTCACCATTGATCTCCAGCGTGTCTACCATTTGGAATGCTaGGAACCGATGGGAGAAGTCGAAAAGGTGCTGGCCATTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GDVTIDLQRVYHLEC*EPMGEVEKVLAIGK Trigger: TTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGGTGACATCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS TCA 72 bp | AGAAGTCGAAAAGGTGCTGGCCATTGGCAAACACCTTaGATCGATCCATGCCGCAGCGGATTGACAGATCAA | + |
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Preference number: 6 (lower is better) Translates to: RSRKGAGHWQTP*IDPCRSGLTDQ Trigger: TTGATCTGTCAATCCGCTGCGGCATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS GCA 72 bp | TGGAATGCTTGGAACCGATGGGAGAAGTCGAAAAGGTaGTGGCCATTGGCAAACACCTTGAATCGATCCATG | + |
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Preference number: 6 (lower is better) Translates to: WNAWNRWEKSKR*WPLANTLNRSM Trigger: CATGGATCGATTCAAGGTGTTTGCCAATGGCCAGCACCTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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| CDS CAA 72 bp | GGTGATGTCACCATTGATCTCCAGCGTGTCTACCATTaGGAATGCTTGGAACCGATGGGAGAAGTCGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: GDVTIDLQRVYH*ECLEPMGEVEK Trigger: CTTTTCGACTTCTCCCATCGGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGGTGACATCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066723.15 ENSMUST00000208971.2 |
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