Pregenerated sensors for LGALS3BP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033880Ensembl transcript IDs: ENSMUST00000043722.10, ENSMUST00000106290.4, ENSMUST00000144529.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATGGGGCTACTGCAGTAGGCACAGGAAATCCCACAGGACCTCATaGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: RWGYCSRHRKSHRTS*NLLVPAVRALGLSV Trigger: GACTGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTAGCCCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCCACAGGACCTGAACCTGCTTGTACCTaGAGTGAGGGCCCTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: VTVTDGATAVGTGNPTGPEPACT*SEGPGT Trigger: AGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTC...AGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| 3UTR-3UTR TCA 90 bp | GTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCCACAGGACCTCTCTCAGTCCTGGAGTaGGTGCTGGCTGAAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: VTVTDGATAVGTGNPTGPLSVLE*VLAETF Trigger: GAAGGTTTCAGCCAGCACTCACTCCAGGACTGAGAG...AGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| 3UTR TCA 72 bp | CCCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTaGGGGCCCTGGGACTCTCAGTCCTGGAGTGAGTGC | + |
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Preference number: 3 (lower is better) Translates to: PTGPHGTCLYLQ*GPWDSQSWSEC Trigger: GCACTCACTCCAGGACTGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| 3UTR GCA 72 bp | GAAATCCCACAGGACCTCATGGAACCTGCTTGTACCTaGAGTGAGGGCCCTGGGACTCTCAGTCCTGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: EIPQDLMEPACT*SEGPGTLSPGV Trigger: CACTCCAGGACTGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGGGATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| 3UTR CCA 72 bp | TACTGCAGTAGGCACAGGAAATCCCACAGGACCTCATaGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: YCSRHRKSHRTS*NLLVPAVRALG Trigger: TCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CCA 90 bp | GCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACTGAGAAGGGAGTATGGAAAGTaGGGTCTTGGGGGAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: AAGGEGGDTGMSASPPLRREYGK*GLGGGG Trigger: CCCTCCTCCCCCAAGACCCCACTTTCCATACTCCCT...TCTCAGTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | ACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACTCCAGCAGCTCTGCATaGTGGGGAGGTAGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TKQLEAKEGTQECLRPHHSSSSA*WGGRWL Trigger: CAGCCACCTACCTCCCCACCATGCAGAGCTGCTGGA...GTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR TCA 90 bp | ATCCCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTGGGGAGGTAGGTGGCTaGCCAGGAGATCTGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: IPQDLMEPACTCSEGPGTGEVGG*PGDLLV Trigger: GACAAGCAGATCTCCTGGTCAGCCACCTACCTCCCC...AGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR TCA 90 bp | ACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGTCCTGGCTGCTAAAGGCCCCTaGGGCACAGGGAAAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TSWNLLVPAVRALGLSVLAAKGP*GTGKEG Trigger: TCCCTCTTTCCCTGTGCCTCAGGGGCCTTTAGCAGC...CAGGACTGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR TCA 90 bp | ATCCCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTGCTGCTAAAGGCCCCTaGGGCACAGGGAAAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: IPQDLMEPACTCSEGPGTAAKGP*GTGKEG Trigger: TCCCTCTTTCCCTGTGCCTCAGGGGCCTTTAGCAGC...AGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR GCA 90 bp | CCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCGCTCCACTGGTCCACTaGCTTCAGCAGATCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PQDLMEPACTCSEGPGTLAPLVH*LQQIQL Trigger: GAGCTGGATCTGCTGAAGGCAGTGGACCAGTGGAGC...GAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | ACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGTCCTGCCCTGCCCTGTCACCTaGATGAATAGGTCGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TSWNLLVPAVRALGLSVLPCPVT*MNRSQP Trigger: GGGCTGCGACCTATTCATCCAGGTGACAGGGCAGGG...CAGGACTGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | ACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACCTTGGGGGAGGAGGGTaGCAAAAAGCCGTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: TKQLEAKEGTQECLRPHHLGGGG*QKAVHS Trigger: ACTGTGGACGGCTTTTTGCCACCCTCCTCCCCCAAG...GTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | CCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCCAGCCAGCTCACTCTTaGGGAGGAGAGCCTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: PQDLMEPACTCSEGPGTLQPAHS*GGEPGS Trigger: TGATCCAGGCTCTCCTCCCCAAGAGTGAGCTGGCTG...GAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | CACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCATCCAGCAGCTCTGCATaGTGGGGAGGTAGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HRTSWNLLVPAVRALGLSSSSSA*WGGRWL Trigger: CAGCCACCTACCTCCCCACCATGCAGAGCTGCTGGA...TGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR TCA 90 bp | TTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCGCGGCCCTCATTGGCTaGGGCCCCGTTAACCAAGCG | + |
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Preference number: 4 (lower is better) Translates to: LCLQSSWRRRRGHRNVCVAALIG*GPVNQA Trigger: CGCTTGGTTAACGGGGCCTCAGCCAATGAGGGCCGC...GACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR GCA 90 bp | TTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCGCCCGAAGGCAGCTCTaGCCAGTGCTTGGGTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LCLQSSWRRRRGHRNVCVARRQL*PVLGWR Trigger: ACGCCACCCAAGCACTGGGCAGAGCTGCCTTCGGGC...GACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | ACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACCCAAGCTACTCCAGGTaGAAGAGGTGTAAAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TKQLEAKEGTQECLRPHHPSYSR*KRCKGG Trigger: CCCGCCTTTACACCTCTTCCACCTGGAGTAGCTTGG...GTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR TCA 90 bp | CCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCCCATCTTCTGTACCTTaGGTCCCTGGAACCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PQDLMEPACTCSEGPGTLPSSVP*VPGTSK Trigger: CTTGCTGGTTCCAGGGACTCAAGGTACAGAAGATGG...GAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR TCA 90 bp | CCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGCCTTCAAAGCTGGTaGCATCCACCACACTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PQDLMEPACTCSEGPGTLSLQSW*HPPHCS Trigger: GCTACAGTGTGGTGGATGTCACCAGCTTTGAAGGCT...GAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR GCA 90 bp | ACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGTCCTGTCCAACCCAGGGATCTaGAACTGGCCAGTGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: TSWNLLVPAVRALGLSVLSNPGI*NWPVRT Trigger: AGTCCTCACTGGCCAGTTGCAGATCCCTGGGTTGGA...CAGGACTGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | CACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAAGTCCTGAAGCTCTGTaGCCCCATAGGCAGAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: HRTSWNLLVPAVRALGLSSPEAL*PHRQRL Trigger: TAGCCTCTGCCTATGGGGCCACAGAGCTTCAGGACT...TGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | GTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCCACAGGACCTCCTGGGGCAGCATCATaGGGAAGCGGACCTGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VTVTDGATAVGTGNPTGPPGAAS*GSGPVP Trigger: TGGAACAGGTCCGCTTCCCCATGATGCTGCCCCAGG...AGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | ACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACACTCCAAGGCCTGCATaGTCTTCCTCTGGAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: TKQLEAKEGTQECLRPHHTPRPA*SSSGTV Trigger: CACTGTTCCAGAGGAAGACCATGCAGGCCTTGGAGT...GTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | GCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACTGAGAGAGTCTTGGAACTATTaGTGTCCAGGGCAGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: AAGGEGGDTGMSASPPLRESWNY*CPGQWE Trigger: TTCCCACTGCCCTGGACACCAATAGTTCCAAGACTC...TCTCAGTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR TCA 90 bp | ACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACAGATCTGCTTGTCCTTaGAGAGGAAGCTGGGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: TKQLEAKEGTQECLRPHHRSACP*RGSWGV Trigger: AACACCCCAGCTTCCTCTTCAAGGACAAGCAGATCT...GTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR TCA 90 bp | TTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCGGGGAGGTAGGTGGCTaGCCAGGAGATCTGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LCLQSSWRRRRGHRNVCVGEVGG*PGDLLV Trigger: GACAAGCAGATCTCCTGGTCAGCCACCTACCTCCCC...GACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR GCA 90 bp | ACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCCACAGGACCTCATGGAACCGGCAGCTCTGCCCAGTaGTTGGGTGGCGTTCTCATA | + |
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Preference number: 4 (lower is better) Translates to: TDGATAVGTGNPTGPHGTGSSAQ*LGGVLI Trigger: TATGAGAACGCCACCCAAGCACTGGGCAGAGCTGCC...GGTTCCATGAGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR GCA 90 bp | CACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAAAGGACAGGTTGAACTaGAGCTCGAACAGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HRTSWNLLVPAVRALGLSKDRLN*SSNSSW Trigger: CCAGGAGCTGTTCGAGCTGCAGTTCAACCTGTCCTT...TGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR GCA 90 bp | ACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGTCCTGTGGAACTCCAAGGCCTaGATGGTCTTCCTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TSWNLLVPAVRALGLSVLWNSKA*MVFLWN Trigger: GTTCCAGAGGAAGACCATGCAGGCCTTGGAGTTCCA...CAGGACTGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | GCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACTGAGATGTACCTTGAGTCCCTaGAACCAGCAAGAACACAGA | + |
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Preference number: 4 (lower is better) Translates to: AAGGEGGDTGMSASPPLRCTLSP*NQQEHR Trigger: TCTGTGTTCTTGCTGGTTCCAGGGACTCAAGGTACA...TCTCAGTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | TTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCAGGTCGCAGCCCTGCTaGCTGTCAAAGATCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LCLQSSWRRRRGHRNVCVRSQPC*LSKIWP Trigger: GGGCCAGATCTTTGACAGCCAGCAGGGCTGCGACCT...GACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | TACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCATCAGGCCTTTGTACTTaGCCAGCACTTCGACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: YKAAGGEGGDTGMSASPPSGLCT*PALRQA Trigger: TGCCTGTCGAAGTGCTGGCCAAGTACAAAGGCCTGA...TGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | CACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGAAGCTGGGGTGTTGTaGGGTTTGGAAGGACTGGTA | + |
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Preference number: 4 (lower is better) Translates to: HRTSWNLLVPAVRALGLSEAGVL*GLEGLV Trigger: TACCAGTCCTTCCAAACCCCACAACACCCCAGCTTC...TGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCCACAGGACCTCATGGAACCTGGTGGGGAGGTAGGTaGCTGACCAGGAGATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TDGATAVGTGNPTGPHGTWWGGR*LTRRSA Trigger: AGCAGATCTCCTGGTCAGCCACCTACCTCCCCACCA...GGTTCCATGAGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CCA 90 bp | TACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCAAGAGGGAGGGAGTCTTaGAACTATTGGTGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: YKAAGGEGGDTGMSASPPRGRES*NYWCPG Trigger: CCCTGGACACCAATAGTTCCAAGACTCCCTCCCTCT...TGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR GCA 90 bp | ATCCCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTGCTGACCAGGAGATCTaGTTGTCCTTGAAGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IPQDLMEPACTCSEGPGTADQEI*LSLKRK Trigger: CTTCCTCTTCAAGGACAAGCAGATCTCCTGGTCAGC...AGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CCA 90 bp | TTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCTGGATCAAGGTGGTaGGAACAGCCGACCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: LCLQSSWRRRRGHRNVCVPGSRW*EQPTRT Trigger: AGTCCTGGTCGGCTGTTCCCACCACCTTGATCCAGG...GACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR TCA 90 bp | TATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCAGCCTTCAAAGCTGGTaGCATCCACCACACTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: YAYKAAGGEGGDTGMSASSLQSW*HPPHCS Trigger: GCTACAGTGTGGTGGATGTCACCAGCTTTGAAGGCT...GGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR GCA 90 bp | GAATACAATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGGAGCAGACCACGCCTaGGTCCTTCTCGTGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: EYNQFMLTKQLEAKEGTQGADHA*VLLVPT Trigger: TGTGGGCACGAGAAGGACGCAGGCGTGGTCTGCTCC...CTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGATTGTATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR GCA 90 bp | ACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCCACAGGACCTCATGGAACCAATAGGTCGCAGCCCTaGTGGCTGTCAAAGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: TDGATAVGTGNPTGPHGTNRSQP*WLSKIW Trigger: CCAGATCTTTGACAGCCAGCAGGGCTGCGACCTATT...GGTTCCATGAGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCGATCGGTCCCTTTCCTaGCCCGAAGGCAGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSDRSLS*PEGSSA Trigger: GGCAGAGCTGCCTTCGGGCCAGGAAAGGGACCGATC...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | TATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCTGGCTGTCAAAGATCTaGCCCAGTGCATCTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YAYKAAGGEGGDTGMSASWLSKI*PSASES Trigger: GCTCTCAGATGCACTGGGCCAGATCTTTGACAGCCA...GGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | ACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCCACAGGACCTCATGGAACCGAAGCTGGGGTGTTGTaGGGTTTGGAAGGACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TDGATAVGTGNPTGPHGTEAGVL*GLEGLV Trigger: TACCAGTCCTTCCAAACCCCACAACACCCCAGCTTC...GGTTCCATGAGGTCCTGTGGGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CCA 90 bp | ATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCAGCTCGAACAGCTCCTaGGGCAGCATCATGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLCLQSSWRRRRGHRNVSSNSS*GSIMGK Trigger: CTTCCCCATGATGCTGCCCCAGGAGCTGTTCGAGCT...GACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | TATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCGAGTCTTGGAACTATTaGTGTCCAGGGCAGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YAYKAAGGEGGDTGMSASESWNY*CPGQWE Trigger: TTCCCACTGCCCTGGACACCAATAGTTCCAAGACTC...GGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CCA 90 bp | ATACAATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGATGGTGGGGAGGTAGGTaGCTGACCAGGAGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVYAYKAAGGEGGDTGWWGGR*LTRRSA Trigger: AGCAGATCTCCTGGTCAGCCACCTACCTCCCCACCA...TCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGATTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CCA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCTGGAAAGTGGGGTCTTaGGGGAGGAGGGTGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSWKVGS*GRRVAK Trigger: TTTTGCCACCCTCCTCCCCCAAGACCCCACTTTCCA...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCAGGTCCAAGGGAGTATaGAAAGTGGGGTCTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSRSKGV*KVGSWG Trigger: CCCCCAAGACCCCACTTTCCATACTCCCTTGGACCT...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCTTTGTGCCCTCCAGGTaGAGGCCATCACCAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSFVPSR*RPSPSY Trigger: GTAGCTTGGTGATGGCCTCCACCTGGAGGGCACAAA...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR TCA 90 bp | ATACAATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGATGTAGGTGTCCTCCGTaGGGTTCAGGCCTTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IQSVYAYKAAGGEGGDTGCRCPP*GSGLCT Trigger: AGTACAAAGGCCTGAACCTCACGGAGGACACCTACA...TCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGATTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CCA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCCCTCGTGTGAGGCAATaGTTTCTGTGCTCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSPRVRQ*FLCSTG Trigger: ACCAGTGGAGCACAGAAACCATTGCCTCACACGAGG...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR TCA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCAGATCTGCTTGTCCTTaGAGAGGAAGCTGGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSRSACP*RGSWGV Trigger: AACACCCCAGCTTCCTCTTCAAGGACAAGCAGATCT...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR GCA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCGCTGACCAGGAGATCTaGTTGTCCTTGAAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSADQEI*LSLKRK Trigger: CTTCCTCTTCAAGGACAAGCAGATCTCCTGGTCAGC...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CCA 90 bp | TCATTTGAATACAATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGAGAGGGAGGGAGTCTTaGAACTATTGGTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFEYNQFMLTKQLEAKEGRGRES*NYWCPG Trigger: CCCTGGACACCAATAGTTCCAAGACTCCCTCCCTCT...CCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGATTGTATTCAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS CCA 90 bp | TCCACTCTCATGATGACGCTGCTGCCCACCACTTGCCACAGGGCCTaGGCCTCGGGGTTGGTGCGCAGGATCAGCGTGTGGGCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: STLMMTLLPTTCHRA*ASGLVRRISVWAQR Trigger: CCTCTGTGCCCACACGCTGATCCTGCGCACCAACCCCGAGGCCCAGGCCCTGTGGCAAGTGGTGGGCAGCAGCGTCATCATGAGAGTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS-3UTR CAA 90 bp | ACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGTCCTGGCCTGGGCCTCGGGGTaGGTGCGCAGGATCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSWNLLVPAVRALGLSVLAWASG*VRRISV Trigger: CACGCTGATCCTGCGCACCAACCCCGAGGCCCAGGC...CAGGACTGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CAA 90 bp | ATCCCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTGCTGCTGCCCACCACTaGCCACAGGGCCTGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IPQDLMEPACTCSEGPGTAAAHH*PQGLGL Trigger: GAGGCCCAGGCCCTGTGGCAAGTGGTGGGCAGCAGC...AGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS TCA 90 bp | GGGCACAGAGGCTCAGGTCCTCATACCCCTGCCCTGTCACCTGGATaGATAGGTCGCAGCCCTGCTGGCTGTCAAAGATCTGGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHRGSGPHTPALSPG*IGRSPAGCQRSGPV Trigger: CACTGGGCCAGATCTTTGACAGCCAGCAGGGCTGCGACCTATTCATCCAGGTGACAGGGCAGGGGTATGAGGACCTGAGCCTCTGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 90 bp | CCCCCACCGGCCTCTGTAGAAGATCTCCACGCGGCCCTCATTGGCTaGGGCCCCGTTAACCAAGCGCATGTCTCCATCTTCTGTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPPASVEDLHAALIG*GPVNQAHVSIFCTL Trigger: CAAGGTACAGAAGATGGAGACATGCGCTTGGTTAACGGGGCCTCAGCCAATGAGGGCCGCGTGGAGATCTTCTACAGAGGCCGGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 90 bp | CCCACAGCGGCTCACCATCCAACCCAGGGATCTGCAACTGGCCAGTaGGGACTCGGTCCCTGTACATTCCACCTCATCCAGCATGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: PTAAHHPTQGSATGQ*GLGPCTFHLIQHDR Trigger: CCGATCATGCTGGATGAGGTGGAATGTACAGGGACCGAGTCCTCACTGGCCAGTTGCAGATCCCTGGGTTGGATGGTGAGCCGCTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 90 bp | ATCTGGCCCAGTGCATCTGAGAGCTCTCCAGAGAGGTCCAGGATGTaGAGCCCCGTGGTATCGTTGGAGCAGACCACGCCTGCGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IWPSASESSPERSRM*SPVVSLEQTTPASF Trigger: GAAGGACGCAGGCGTGGTCTGCTCCAACGATACCACGGGGCTTCACATCCTGGACCTCTCTGGAGAGCTCTCAGATGCACTGGGCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS GCA 90 bp | CGTCCTTCTCGTGCCCACAGCGGCTCACCATCCAACCCAGGGATCTaGAACTGGCCAGTGAGGACTCGGTCCCTGTACATTCCACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RPSRAHSGSPSNPGI*NWPVRTRSLYIPPH Trigger: ATGAGGTGGAATGTACAGGGACCGAGTCCTCACTGGCCAGTTGCAGATCCCTGGGTTGGATGGTGAGCCGCTGTGGGCACGAGAAGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CCA 90 bp | TCTCGTGCCCACAGCGGCTCACCATCCAACCCAGGGATCTGCAACTaGCCAGTGAGGACTCGGTCCCTGTACATTCCACCTCATCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRAHSGSPSNPGICN*PVRTRSLYIPPHPA Trigger: TGCTGGATGAGGTGGAATGTACAGGGACCGAGTCCTCACTGGCCAGTTGCAGATCCCTGGGTTGGATGGTGAGCCGCTGTGGGCACGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS-3UTR CAA 90 bp | CCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCGAGGAAGCTGGGGTGTaGTGGGGTTTGGAAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PQDLMEPACTCSEGPGTLEEAGV*WGLEGL Trigger: CAGTCCTTCCAAACCCCACAACACCCCAGCTTCCTC...GAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CAA 90 bp | CCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCGTGGGAATAGGGGCCTaGGAGCCTTCAAAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQDLMEPACTCSEGPGTLVGIGA*EPSKLV Trigger: CACCAGCTTTGAAGGCTCCAAGGCCCCTATTCCCAC...GAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CAA 90 bp | ACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACGTGGGAATAGGGGCCTaGGAGCCTTCAAAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TKQLEAKEGTQECLRPHHVGIGA*EPSKLV Trigger: CACCAGCTTTGAAGGCTCCAAGGCCCCTATTCCCAC...GTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS CCA 90 bp | ACACAGCCAGCTCACTCTTGGGGAGGAGAGCCTGGATCAAGGTGGTaGGAACAGCCGACCAGGACTCAGACTGTGTCAGAGGCTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TQPAHSWGGEPGSRW*EQPTRTQTVSEARS Trigger: ACTTCGAGCCTCTGACACAGTCTGAGTCCTGGTCGGCTGTTCCCACCACCTTGATCCAGGCTCTCCTCCCCAAGAGTGAGCTGGCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 90 bp | TCCAGCTCACTAGACACAGCCAGCTCACTCTTGGGGAGGAGAGCCTaGATCAAGGTGGTGGGAACAGCCGACCAGGACTCAGACTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLDTASSLLGRRA*IKVVGTADQDSDCV Trigger: GACACAGTCTGAGTCCTGGTCGGCTGTTCCCACCACCTTGATCCAGGCTCTCCTCCCCAAGAGTGAGCTGGCTGTGTCTAGTGAGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CAA 90 bp | GCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACTGAGAGGGGTGTTGTGGGGTTaGGAAGGACTGGTAGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: AAGGEGGDTGMSASPPLRGVLWG*EGLVAI Trigger: AATAGCTACCAGTCCTTCCAAACCCCACAACACCCC...TCTCAGTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS TCA 90 bp | CATGGGGAAGCGGACCTGTTCCACCAGGCGCTCTATATCCTCGTGTaGGGCAATGGTTTCTGTGCTCCACTGGTCCACTGCCTTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HGEADLFHQALYILV*GNGFCAPLVHCLQQ Trigger: CTGCTGAAGGCAGTGGACCAGTGGAGCACAGAAACCATTGCCTCACACGAGGATATAGAGCGCCTGGTGGAACAGGTCCGCTTCCCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS TCA 90 bp | TCCAGGTGGAAGAGGTGTAAAGGCGGGGCTTGTAGGTGTCCTCCGTaGGGTTCAGGCCTTTGTACTTGGCCAGCACTTCGACAGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SRWKRCKGGACRCPP*GSGLCTWPALRQAL Trigger: CAGTGCCTGTCGAAGTGCTGGCCAAGTACAAAGGCCTGAACCTCACGGAGGACACCTACAAGCCCCGCCTTTACACCTCTTCCACCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 90 bp | TCATACCCCTGCCCTGTCACCTGGATGAATAGGTCGCAGCCCTGCTaGCTGTCAAAGATCTGGCCCAGTGCATCTGAGAGCTCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SYPCPVTWMNRSQPC*LSKIWPSASESSPE Trigger: CTCTGGAGAGCTCTCAGATGCACTGGGCCAGATCTTTGACAGCCAGCAGGGCTGCGACCTATTCATCCAGGTGACAGGGCAGGGGTATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS-3UTR CAA 90 bp | CACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCAGTGAGGTTCAGGCCTTaGTACTTGGCCAGCACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: HRTSWNLLVPAVRALGLSVRFRP*YLASTS Trigger: CGAAGTGCTGGCCAAGTACAAAGGCCTGAACCTCAC...TGAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CAA 90 bp | ACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCCCACCACGAGATCTGCTTGTCCTaGAAGAGGAAGCTGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TKQLEAKEGTQECLRPHHEICLS*KRKLGC Trigger: ACACCCCAGCTTCCTCTTCAAGGACAAGCAGATCTC...GTGGTGGGGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CAA 90 bp | CCACAGGACCTCATGGAACCTGCTTGTACCTGCAGTGAGGGCCCTGGGACTCTCGAGATCTGCTTGTCCTaGAAGAGGAAGCTGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PQDLMEPACTCSEGPGTLEICLS*KRKLGC Trigger: ACACCCCAGCTTCCTCTTCAAGGACAAGCAGATCTC...GAGAGTCCCAGGGCCCTCACTGCAGGTACAAGCAGGTTCCATGAGGTCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS CCA 90 bp | AGCGGACCTGTTCCACCAGGCGCTCTATATCCTCGTGTGAGGCAATaGTTTCTGTGCTCCACTGGTCCACTGCCTTCAGCAGATCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGPVPPGALYPRVRQ*FLCSTGPLPSADPA Trigger: AGCTGGATCTGCTGAAGGCAGTGGACCAGTGGAGCACAGAAACCATTGCCTCACACGAGGATATAGAGCGCCTGGTGGAACAGGTCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS TCA 90 bp | GCTGAGGCCCCGTTAACCAAGCGCATGTCTCCATCTTCTGTACCTTaGGTCCCTGGAACCAGCAAGAACACAGAGAGGAGCCACAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AEAPLTKRMSPSSVP*VPGTSKNTERSHRR Trigger: TCTCCTGTGGCTCCTCTCTGTGTTCTTGCTGGTTCCAGGGACTCAAGGTACAGAAGATGGAGACATGCGCTTGGTTAACGGGGCCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 90 bp | TCTTCCTCTGGAACAGTGCCTGGTGATCTTGGTACAAGGACAGGTTaGACTGCAGCTCGAACAGCTCCTGGGGCAGCATCATGGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSGTVPGDLGTRTG*TAARTAPGAASWGS Trigger: GCTTCCCCATGATGCTGCCCCAGGAGCTGTTCGAGCTGCAGTTCAACCTGTCCTTGTACCAAGATCACCAGGCACTGTTCCAGAGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 90 bp | AGGCGCTCTATATCCTCGTGTGAGGCAATGGTTTCTGTGCTCCACTaGTCCACTGCCTTCAGCAGATCCAGCTCACTAGACACAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRSISSCEAMVSVLH*STAFSRSSSLDTAS Trigger: GCTGGCTGTGTCTAGTGAGCTGGATCTGCTGAAGGCAGTGGACCAGTGGAGCACAGAAACCATTGCCTCACACGAGGATATAGAGCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CAA 90 bp | TATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCCGGAGTCTTGGAACTATaGGTGTCCAGGGCAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: YAYKAAGGEGGDTGMSASGVLEL*VSRAVG Trigger: TCCCACTGCCCTGGACACCAATAGTTCCAAGACTCC...GGACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CAA 90 bp | TTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCTGCGTCGGAGTCTTGGAACTATaGGTGTCCAGGGCAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCLQSSWRRRRGHRNVCVGVLEL*VSRAVG Trigger: TCCCACTGCCCTGGACACCAATAGTTCCAAGACTCC...GACGCAGACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CAA 90 bp | ATACAATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAAGCTCTGCCCAGTGCTaGGGTGGCGTTCTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IQSVYAYKAAGGEGGDTGSSAQC*GGVLIA Trigger: GGCTATGAGAACGCCACCCAAGCACTGGGCAGAGCT...TCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGATTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CAA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCGGGGTGTTGTGGGGTTaGGAAGGACTGGTAGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSGVLWG*EGLVAL Trigger: CAACGCTACCAGTCCTTCCAAACCCCACAACACCCC...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000144529.2 |
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| CDS-3UTR CAA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCTTCAGGCCTTTGTACTaGGCCAGCACTTCGACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSFRPLY*ASTSTG Trigger: GCCTGTCGAAGTGCTGGCCAAGTACAAAGGCCTGAA...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CAA 90 bp | TTTTTGATGAGTGACTGTGACAGATGGGGCTACTGCAGTAGGCACAGGAAATCCAAAAGGTTCCAGAGGTaGTCACACACTGTCCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FLMSDCDRWGYCSRHRKSKRFQR*SHTVPH Trigger: GTGGGGGACAGTGTGTGACAACCTCTGGAACCTTTT...GGATTTCCTGTGCCTACTGCAGTAGCCCCATCTGTCACAGTCACTCATCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
||
| CDS-3UTR CAA 90 bp | ATACAATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGATGGTACAAGGACAGGTaGAACTGCAGCTCGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQSVYAYKAAGGEGGDTGWYKDR*NCSSNS Trigger: GCTGTTCGAGCTGCAGTTCAACCTGTCCTTGTACCA...TCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGATTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CAA 90 bp | TCATTTGAATACAATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGGAGGAAGCTGGGGTGTaGTGGGGTTTGGAAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: SFEYNQFMLTKQLEAKEGEEAGV*WGLEGL Trigger: CAGTCCTTCCAAACCCCACAACACCCCAGCTTCCTC...CCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGATTGTATTCAAATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS-3UTR CAA 90 bp | GAATACAATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGAAGAGGGAGGGAGTCTaGGAACTATTGGTGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: EYNQFMLTKQLEAKEGTQKREGV*ELLVSR Trigger: CCTGGACACCAATAGTTCCAAGACTCCCTCCCTCTT...CTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGATTGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS CCA 90 bp | AGAGCTGATTGTATCGATTGTATTCATATCTTTGTGCCCTCCAGGTaGAGGCCATCACCAAGCTACTCCAGGTGGAAGAGGTGTAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: RADCIDCIHIFVPSR*RPSPSYSRWKRCKG Trigger: GCCTTTACACCTCTTCCACCTGGAGTAGCTTGGTGATGGCCTCCACCTGGAGGGCACAAAGATATGAATACAATCGATACAATCAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS-3UTR CAA 90 bp | ATCAGTTTATGCTTACAAAGCAGCTGGAGGCGAAGGAGGGGACACAGGAATGTCATTGTATTCATATCTTaGTGCCCTCCAGGTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: ISLCLQSSWRRRRGHRNVIVFIS*CPPGGG Trigger: GCCTCCACCTGGAGGGCACAAAGATATGAATACAAT...GACATTCCTGTGTCCCCTCCTTCGCCTCCAGCTGCTTTGTAAGCATAAACTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS TCA 90 bp | GTGTTGTGGGGTTTGGAAGGACTGGTAGCTATTGTACCGGGCTACTaGGCCATAGCCATATGTATAGAGCTGATTGTATCGATTGTATTC | + |
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Preference number: 5 (lower is better) Translates to: VLWGLEGLVAIVPGY*AIAICIELIVSIVF Trigger: GAATACAATCGATACAATCAGCTCTATACATATGGCTATGGCTCAGTAGCCCGGTACAATAGCTACCAGTCCTTCCAAACCCCACAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CAA 72 bp | CTGCCCACCACTTGCCACAGGGCCTGGGCCTCGGGGTaGGTGCGCAGGATCAGCGTGTGGGCACAGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LPTTCHRAWASG*VRRISVWAQRL Trigger: GAGCCTCTGTGCCCACACGCTGATCCTGCGCACCAACCCCGAGGCCCAGGCCCTGTGGCAAGTGGTGGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS GCA 72 bp | CGGTCCCTTTCCTGGCCCGAAGGCAGCTCTGCCCAGTaGTTGGGTGGCGTTCTCATAGCCCAGGGCCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RSLSWPEGSSAQ*LGGVLIAQGPA Trigger: TGCCGGGCCCTGGGCTATGAGAACGCCACCCAAGCACTGGGCAGAGCTGCCTTCGGGCCAGGAAAGGGACCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CCA 72 bp | TGCCCACCACTTGCCACAGGGCCTGGGCCTCGGGGTTaGTGCGCAGGATCAGCGTGTGGGCACAGAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CPPLATGPGPRG*CAGSACGHRGS Trigger: TGAGCCTCTGTGCCCACACGCTGATCCTGCGCACCAACCCCGAGGCCCAGGCCCTGTGGCAAGTGGTGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CCA 72 bp | TTCCTGGCCCGAAGGCAGCTCTGCCCAGTGCTTGGGTaGCGTTCTCATAGCCCAGGGCCCGGCAGACGACGT | + |
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Preference number: 6 (lower is better) Translates to: FLARRQLCPVLG*RSHSPGPGRRR Trigger: ACGTCGTCTGCCGGGCCCTGGGCTATGAGAACGCCACCCAAGCACTGGGCAGAGCTGCCTTCGGGCCAGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CCA 72 bp | ATGATGACGCTGCTGCCCACCACTTGCCACAGGGCCTaGGCCTCGGGGTTGGTGCGCAGGATCAGCGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: MMTLLPTTCHRA*ASGLVRRISVW Trigger: CCACACGCTGATCCTGCGCACCAACCCCGAGGCCCAGGCCCTGTGGCAAGTGGTGGGCAGCAGCGTCATCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CAA 72 bp | TCCCTTTCCTGGCCCGAAGGCAGCTCTGCCCAGTGCTaGGGTGGCGTTCTCATAGCCCAGGGCCCGGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SLSWPEGSSAQC*GGVLIAQGPAD Trigger: GTCTGCCGGGCCCTGGGCTATGAGAACGCCACCCAAGCACTGGGCAGAGCTGCCTTCGGGCCAGGAAAGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CAA 90 bp | CATGCACTCAGCATCCACTCTCATGATGACGCTGCTGCCCACCACTaGCCACAGGGCCTGGGCCTCGGGGTTGGTGCGCAGGATCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: HALSIHSHDDAAAHH*PQGLGLGVGAQDQR Trigger: ACGCTGATCCTGCGCACCAACCCCGAGGCCCAGGCCCTGTGGCAAGTGGTGGGCAGCAGCGTCATCATGAGAGTGGATGCTGAGTGCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS GCA 72 bp | AGCGTGTGGGCACAGAGGCTCAGGTCCTCATACCCCTaGCCTGTCACCTGGATGAATAGGTCGCAGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SVWAQRLRSSYP*PVTWMNRSQPC Trigger: GCAGGGCTGCGACCTATTCATCCAGGTGACAGGGCAGGGGTATGAGGACCTGAGCCTCTGTGCCCACACGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS GCA 72 bp | CGTGCCCACAGCGGCTCACCATCCAACCCAGGGATCTaGAACTGGCCAGTGAGGACTCGGTCCCTGTACATT | + |
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Preference number: 6 (lower is better) Translates to: RAHSGSPSNPGI*NWPVRTRSLYI Trigger: AATGTACAGGGACCGAGTCCTCACTGGCCAGTTGCAGATCCCTGGGTTGGATGGTGAGCCGCTGTGGGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 72 bp | AGGACTCGGTCCCTGTACATTCCACCTCATCCAGCATaGTCGGTCCCTTTCCTGGCCCGAAGGCAGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RTRSLYIPPHPA*SVPFLARRQLC Trigger: GCAGAGCTGCCTTCGGGCCAGGAAAGGGACCGATCATGCTGGATGAGGTGGAATGTACAGGGACCGAGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CCA 72 bp | GCTCACTCTTGGGGAGGAGAGCCTGGATCAAGGTGGTaGGAACAGCCGACCAGGACTCAGACTGTGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: AHSWGGEPGSRW*EQPTRTQTVSE Trigger: CTCTGACACAGTCTGAGTCCTGGTCGGCTGTTCCCACCACCTTGATCCAGGCTCTCCTCCCCAAGAGTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 72 bp | CCCTCCAGGTGGAGGCCATCACCAAGCTACTCCAGGTaGAAGAGGTGTAAAGGCGGGGCTTGTAGGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PSRWRPSPSYSR*KRCKGGACRCP Trigger: AGGACACCTACAAGCCCCGCCTTTACACCTCTTCCACCTGGAGTAGCTTGGTGATGGCCTCCACCTGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CAA 90 bp | ACTGCCTTCAGCAGATCCAGCTCACTAGACACAGCCAGCTCACTCTaGGGGAGGAGAGCCTGGATCAAGGTGGTGGGAACAGCCGACCAG | + |
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Preference number: 6 (lower is better) Translates to: TAFSRSSSLDTASSL*GRRAWIKVVGTADQ Trigger: CTGGTCGGCTGTTCCCACCACCTTGATCCAGGCTCTCCTCCCCAAGAGTGAGCTGGCTGTGTCTAGTGAGCTGGATCTGCTGAAGGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CAA 90 bp | AAGGCCCCTGAGGCACAGGGAAAGAGGGAGGGAGTCTTGGAACTATaGGTGTCCAGGGCAGTGGGAATAGGGGCCTTGGAGCCTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KAPEAQGKREGVLEL*VSRAVGIGALEPSK Trigger: CTTTGAAGGCTCCAAGGCCCCTATTCCCACTGCCCTGGACACCAATAGTTCCAAGACTCCCTCCCTCTTTCCCTGTGCCTCAGGGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS CAA 90 bp | AAGCTGCTAAAGGCCCCTGAGGCACAGGGAAAGAGGGAGGGAGTCTaGGAACTATTGGTGTCCAGGGCAGTGGGAATAGGGGCCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: KLLKAPEAQGKREGV*ELLVSRAVGIGALE Trigger: CTCCAAGGCCCCTATTCCCACTGCCCTGGACACCAATAGTTCCAAGACTCCCTCCCTCTTTCCCTGTGCCTCAGGGGCCTTTAGCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS TCA 72 bp | GCCTCTGTAGAAGATCTCCACGCGGCCCTCATTGGCTaGGGCCCCGTTAACCAAGCGCATGTCTCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASVEDLHAALIG*GPVNQAHVSIF Trigger: GAAGATGGAGACATGCGCTTGGTTAACGGGGCCTCAGCCAATGAGGGCCGCGTGGAGATCTTCTACAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 72 bp | GCTCACCATCCAACCCAGGGATCTGCAACTGGCCAGTaGGGACTCGGTCCCTGTACATTCCACCTCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: AHHPTQGSATGQ*GLGPCTFHLIQ Trigger: CTGGATGAGGTGGAATGTACAGGGACCGAGTCCTCACTGGCCAGTTGCAGATCCCTGGGTTGGATGGTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 72 bp | GGCTCAGGTCCTCATACCCCTGCCCTGTCACCTGGATaGATAGGTCGCAGCCCTGCTGGCTGTCAAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: GSGPHTPALSPG*IGRSPAGCQRS Trigger: AGATCTTTGACAGCCAGCAGGGCTGCGACCTATTCATCCAGGTGACAGGGCAGGGGTATGAGGACCTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 72 bp | GCGGACCTGTTCCACCAGGCGCTCTATATCCTCGTGTaGGGCAATGGTTTCTGTGCTCCACTGGTCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: ADLFHQALYILV*GNGFCAPLVHC Trigger: GCAGTGGACCAGTGGAGCACAGAAACCATTGCCTCACACGAGGATATAGAGCGCCTGGTGGAACAGGTCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CAA 90 bp | CTCCAAGGCCTGCATGGTCTTCCTCTGGAACAGTGCCTGGTGATCTaGGTACAAGGACAGGTTGAACTGCAGCTCGAACAGCTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LQGLHGLPLEQCLVI*VQGQVELQLEQLLG Trigger: CCCCAGGAGCTGTTCGAGCTGCAGTTCAACCTGTCCTTGTACCAAGATCACCAGGCACTGTTCCAGAGGAAGACCATGCAGGCCTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 72 bp | ATGAATAGGTCGCAGCCCTGCTGGCTGTCAAAGATCTaGCCCAGTGCATCTGAGAGCTCTCCAGAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: MNRSQPCWLSKI*PSASESSPERS Trigger: GGACCTCTCTGGAGAGCTCTCAGATGCACTGGGCCAGATCTTTGACAGCCAGCAGGGCTGCGACCTATTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CCA 72 bp | AGGTACACGAGAAGCCATAGTTCCAGCAGCTCTGCATaGTGGGGAGGTAGGTGGCTGACCAGGAGATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RYTRSHSSSSSA*WGGRWLTRRSA Trigger: AGCAGATCTCCTGGTCAGCCACCTACCTCCCCACCATGCAGAGCTGCTGGAACTATGGCTTCTCGTGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS TCA 72 bp | AAGAGGTGTAAAGGCGGGGCTTGTAGGTGTCCTCCGTaGGGTTCAGGCCTTTGTACTTGGCCAGCACTTCGA | + |
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Preference number: 6 (lower is better) Translates to: KRCKGGACRCPP*GSGLCTWPALR Trigger: TCGAAGTGCTGGCCAAGTACAAAGGCCTGAACCTCACGGAGGACACCTACAAGCCCCGCCTTTACACCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS GCA 72 bp | GGCGCTCTATATCCTCGTGTGAGGCAATGGTTTCTGTaGTCCACTGGTCCACTGCCTTCAGCAGATCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GALYPRVRQWFL*STGPLPSADPA Trigger: AGCTGGATCTGCTGAAGGCAGTGGACCAGTGGAGCACAGAAACCATTGCCTCACACGAGGATATAGAGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 72 bp | CTTCGACAGGCACTGTGTGGAACTCCAAGGCCTGCATaGTCTTCCTCTGGAACAGTGCCTGGTGATCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LRQALCGTPRPA*SSSGTVPGDLG Trigger: ACCAAGATCACCAGGCACTGTTCCAGAGGAAGACCATGCAGGCCTTGGAGTTCCACACAGTGCCTGTCGAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 72 bp | CCTTTGTACTTGGCCAGCACTTCGACAGGCACTGTGTaGAACTCCAAGGCCTGCATGGTCTTCCTCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PLYLASTSTGTV*NSKACMVFLWN Trigger: GTTCCAGAGGAAGACCATGCAGGCCTTGGAGTTCCACACAGTGCCTGTCGAAGTGCTGGCCAAGTACAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 72 bp | TACACGAGAAGCCATAGTTCCAGCAGCTCTGCATGGTaGGGAGGTAGGTGGCTGACCAGGAGATCTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: YTRSHSSSSSAW*GGRWLTRRSAC Trigger: ACAAGCAGATCTCCTGGTCAGCCACCTACCTCCCCACCATGCAGAGCTGCTGGAACTATGGCTTCTCGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS CAA 72 bp | GAACTATTGGTGTCCAGGGCAGTGGGAATAGGGGCCTaGGAGCCTTCAAAGCTGGTGACATCCACCACACTG | + |
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Preference number: 6 (lower is better) Translates to: ELLVSRAVGIGA*EPSKLVTSTTL Trigger: CAGTGTGGTGGATGTCACCAGCTTTGAAGGCTCCAAGGCCCCTATTCCCACTGCCCTGGACACCAATAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000144529.2 |
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| CDS CAA 72 bp | GGAGATCTGCTTGTCCTTGAAGAGGAAGCTGGGGTGTaGTGGGGTTTGGAAGGACTGGTAGCGTTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GDLLVLEEEAGV*WGLEGLVALEQ Trigger: CTGCTCCAACGCTACCAGTCCTTCCAAACCCCACAACACCCCAGCTTCCTCTTCAAGGACAAGCAGATCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144529.2 |
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| CDS TCA 72 bp | AAGGCCTGCATGGTCTTCCTCTGGAACAGTGCCTGGTaGTCTTGGTACAAGGACAGGTTGAACTGCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: KACMVFLWNSAW*SWYKDRLNCSS Trigger: CGAGCTGCAGTTCAACCTGTCCTTGTACCAAGATCACCAGGCACTGTTCCAGAGGAAGACCATGCAGGCCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 72 bp | CAAGCGCATGTCTCCATCTTCTGTACCTTGAGTCCCTaGAACCAGCAAGAACACAGAGAGGAGCCACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: QAHVSIFCTLSP*NQQEHREEPQE Trigger: CTCCTGTGGCTCCTCTCTGTGTTCTTGCTGGTTCCAGGGACTCAAGGTACAGAAGATGGAGACATGCGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS TCA 72 bp | CCGTTAACCAAGCGCATGTCTCCATCTTCTGTACCTTaGGTCCCTGGAACCAGCAAGAACACAGAGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PLTKRMSPSSVP*VPGTSKNTERS Trigger: GCTCCTCTCTGTGTTCTTGCTGGTTCCAGGGACTCAAGGTACAGAAGATGGAGACATGCGCTTGGTTAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CCA 72 bp | ATATCCTCGTGTGAGGCAATGGTTTCTGTGCTCCACTaGTCCACTGCCTTCAGCAGATCCAGCTCACTAGAC | + |
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Preference number: 6 (lower is better) Translates to: ISSCEAMVSVLH*STAFSRSSSLD Trigger: GTCTAGTGAGCTGGATCTGCTGAAGGCAGTGGACCAGTGGAGCACAGAAACCATTGCCTCACACGAGGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CAA 72 bp | CCCGTTAACCAAGCGCATGTCTCCATCTTCTGTACCTaGAGTCCCTGGAACCAGCAAGAACACAGAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PVNQAHVSIFCT*SPWNQQEHREE Trigger: CTCCTCTCTGTGTTCTTGCTGGTTCCAGGGACTCAAGGTACAGAAGATGGAGACATGCGCTTGGTTAACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043722.10 ENSMUST00000106290.4 |
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| CDS CAA 72 bp | CTGCATGGTCTTCCTCTGGAACAGTGCCTGGTGATCTaGGTACAAGGACAGGTTGAACTGCAGCTCGAACAG | + |
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Preference number: 6 (lower is better) Translates to: LHGLPLEQCLVI*VQGQVELQLEQ Trigger: CTGTTCGAGCTGCAGTTCAACCTGTCCTTGTACCAAGATCACCAGGCACTGTTCCAGAGGAAGACCATGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CAA 72 bp | GGAGATCTGCTTGTCCTTGAAGAGGAAGCTGGGGTGTaGTGGGGTTTGGAAGGACTGGTAGCTATTGTACCG | + |
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Preference number: 6 (lower is better) Translates to: GDLLVLEEEAGV*WGLEGLVAIVP Trigger: CGGTACAATAGCTACCAGTCCTTCCAAACCCCACAACACCCCAGCTTCCTCTTCAAGGACAAGCAGATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CCA 72 bp | TGTATCGATTGTATTCATATCTTTGTGCCCTCCAGGTaGAGGCCATCACCAAGCTACTCCAGGTGGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CIDCIHIFVPSR*RPSPSYSRWKR Trigger: CCTCTTCCACCTGGAGTAGCTTGGTGATGGCCTCCACCTGGAGGGCACAAAGATATGAATACAATCGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CAA 90 bp | ATAGCCATATGTATAGAGCTGATTGTATCGATTGTATTCATATCTTaGTGCCCTCCAGGTGGAGGCCATCACCAAGCTACTCCAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: IAICIELIVSIVFIS*CPPGGGHHQATPGG Trigger: TCCACCTGGAGTAGCTTGGTGATGGCCTCCACCTGGAGGGCACAAAGATATGAATACAATCGATACAATCAGCTCTATACATATGGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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| CDS CAA 72 bp | TGTATAGAGCTGATTGTATCGATTGTATTCATATCTTaGTGCCCTCCAGGTGGAGGCCATCACCAAGCTACT | + |
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Preference number: 6 (lower is better) Translates to: CIELIVSIVFIS*CPPGGGHHQAT Trigger: AGTAGCTTGGTGATGGCCTCCACCTGGAGGGCACAAAGATATGAATACAATCGATACAATCAGCTCTATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043722.10 |
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