Pregenerated sensors for LGALS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050335Ensembl transcript IDs: ENSMUST00000142734.8, ENSMUST00000144794.2, ENSMUST00000146468.4, ENSMUST00000150290.9, ENSMUST00000151405.9
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGTaGGCAGGCACCTGTACCCATGTGCACAGACACACAACACACAAA | + |
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Preference number: 1 (lower is better) Translates to: QPPVTPAPGGLVPLK*AGTCTHVHRHTTHK Trigger: TTTGTGTGTTGTGTGTCTGTGCACATGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| 3UTR TCA 90 bp | ATCCAGTATCATAAAAACCCCCAAAGCGATGGGTATCTCTCAGCATaGGACTTTATTAAATGGATGTCTTACAAGAAGGATAAGGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: IQYHKNPQSDGYLSA*DFIKWMSYKKDKER Trigger: TCTCTCCTTATCCTTCTTGTAAGACATCCATTTAATAAAGTCTCATGCTGAGAGATACCCATCGCTTTGGGGGTTTTTATGATACTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAAAACCCCCAAAGCGATaGGTATCTCTCAGCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLLTTTCNSSSRRPGASQKPPKR*VSLSMR Trigger: TCTCATGCTGAGAGATACCCATCGCTTTGGGGGTTT...TTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| 3UTR-3UTR CCA 90 bp | ACACAACACACAAAGTTTAAAAGGCTAGGGATGTGTAGCTCAGTGAGAGAACACAAACCCCCAAAGCGATaGGTATCTCTCAGCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: TQHTKFKRLGMCSSVREHKPPKR*VSLSMR Trigger: TCTCATGCTGAGAGATACCCATCGCTTTGGGGGTTT...GTGTTCTCTCACTGAGCTACACATCCCTAGCCTTTTAAACTTTGTGTGTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| 3UTR TCA 72 bp | GTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGTaGGCAGGCACCTGTACCCATGTGCACAGACACACA | + |
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Preference number: 3 (lower is better) Translates to: VTPAPGGLVPLK*AGTCTHVHRHT Trigger: TGTGTGTCTGTGCACATGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| 3UTR-3UTR CAA 90 bp | TCACACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCAGTGAGAGAACACTaGCCTAGCAGTCACGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SHSLLTTTCNSSSRRPGASVREH*PSSHEQ Trigger: CTGCTCGTGACTGCTAGGCAAGTGTTCTCTCACTGA...GGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTGTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| 3UTR TCA 72 bp | CATATAAAGACAGGCAGCTGGAGGCATCAGTGGACCTaGCCTGTCTCAGGAGGATCTGAGACTGGTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: HIKTGSWRHQWT*PVSGGSETGSQ Trigger: CTGGGAACCAGTCTCAGATCCTCCTGAGACAGGTCAGGTCCACTGATGCCTCCAGCTGCCTGTCTTTATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142734.8 |
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| 3UTR TCA 72 bp | CATAAAAACCCCCAAAGCGATGGGTATCTCTCAGCATaGGACTTTATTAAATGGATGTCTTACAAGAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: HKNPQSDGYLSA*DFIKWMSYKKD Trigger: ATCCTTCTTGTAAGACATCCATTTAATAAAGTCTCATGCTGAGAGATACCCATCGCTTTGGGGGTTTTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR GCA 90 bp | ATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCCAGGTGCCCCAGGTTaGCCTGGGAAGGCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: MQSFPLLRHTGPVSVPPLPGAPG*PGKAPG Trigger: CCCTGGAGCCTTCCCAGGGCAACCTGGGGCACCTGG...AAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR GCA 90 bp | GAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCCAGGTGCCCCAGGTTaGCCTGGGAAGGCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EMQSFPLLRHTGPVSVPPPGAPG*PGKAPG Trigger: CCCTGGAGCCTTCCCAGGGCAACCTGGGGCACCTGG...GGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR GCA 90 bp | ACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGTGAGCAGGCCAGGTGCCCCAGGTTaGCCTGGGAAGGCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TTTCNSSSRRPGASQVSRPGAPG*PGKAPG Trigger: CCCTGGAGCCTTCCCAGGGCAACCTGGGGCACCTGG...CCTGCTCACTTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTTGGAGGAGCCTGTCCTaGGTAGGCCCCTGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSWRSLS*VGPWRS Trigger: GCTCCTCCAGGGGCCTACCCAGGACAGGCTCCTCCA...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | CAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGAGGAGGAGCCTGTCCTaGGTAGGCCCCTGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QSFPLLRHTGPVSVPPLLRRSLS*VGPWRS Trigger: GCTCCTCCAGGGGCCTACCCAGGACAGGCTCCTCCT...CAGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | CAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGTGCCCCAGGTTGCCCTaGGAAGGCTCCAGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: QSFPLLRHTGPVSVPPLLCPRLP*EGSRGS Trigger: ACTGCCCCTGGAGCCTTCCCAGGGCAACCTGGGGCA...CAGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | ATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTAGCCTCCAGGAGCACTaGGGTAGGCCCCAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: MQSFPLLRHTGPVSVPPLSLQEH*GRPQVP Trigger: GGGCACCTGGGGCCTACCCCAGTGCTCCTGGAGGCT...AAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGGCTCCAGGGGCAGTTaGGCCAGGATAAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSGSRGS*ARISSR Trigger: CCTGGAGCTTATCCTGGCTCAACTGCCCCTGGAGCC...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR GCA 90 bp | GCCTGGTGCCTCTCAAGTGAGCAGGCACCTGTACCCATGTGCACAGACACACAAGGGGTAGGCCCCAGGTaGCCCAGGTTGCCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: AWCLSSEQAPVPMCTDTQGVGPR*PRLPWE Trigger: TTCCCAGGGCAACCTGGGGCACCTGGGGCCTACCCC...TTGTGTGTCTGTGCACATGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | ACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGTGAGCAGGTGGAGGAGCCTGTCCTaGGTAGGCCCCTGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TTTCNSSSRRPGASQVSRWRSLS*VGPWRS Trigger: GCTCCTCCAGGGGCCTACCCAGGACAGGCTCCTCCA...CCTGCTCACTTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | AATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCCTGGGTAGGCCCCTaGAGGAGCCTGTCCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: NAKFPTPKAHRAGFGAAPSWVGP*RSLSWV Trigger: TACCCAGGACAGGCTCCTCCAGGGGCCTACCCAGGA...AGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR GCA 90 bp | GAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGGGGGTAGGCCCCAGGTaGCCCAGGTTGCCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: EREMQSFPLLRHTGPVSVGVGPR*PRLPWE Trigger: TTCCCAGGGCAACCTGGGGCACCTGGGGCCTACCCC...CACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | TCACACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCAGGAGGAGCCTGTCCTaGGTAGGCCCCTGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SHSLLTTTCNSSSRRPGARRSLS*VGPWRS Trigger: GCTCCTCCAGGGGCCTACCCAGGACAGGCTCCTCCT...GGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | AATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTAGCTCCAGGGGCAGTTaGGCCAGGATAAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NAKFPTPKAHRAGFGAAPSSRGS*ARISSR Trigger: CCTGGAGCTTATCCTGGCCCAACTGCCCCTGGAGCT...AGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | CAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGGCACCCGGATATCCTTaGGGGTTTGGGTTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QSFPLLRHTGPVSVPPLLAPGYP*GFGFPE Trigger: CTCTGGAAACCCAAACCCTCAAGGATATCCGGGTGC...CAGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | AACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGTGAGCAGGCACCTGTACCCAGCACCCGGATATCCTTaGGGGTTTGGGTTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NSSSRRPGASQVSRHLYPAPGYP*GFGFPE Trigger: CTCTGGAAACCCAAACCCTCAAGGATATCCGGGTGC...TGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | TCACACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCGGCTCCAGGGGCAGTTaGGCCAGGATAAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SHSLLTTTCNSSSRRPGAGSRGS*ARISSR Trigger: CCTGGAGCTTATCCTGGCTCAACTGCCCCTGGAGCC...GGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR GCA 90 bp | CAGGAGGATCTGAGACTGGTTCCCAGCAACCTGGTCACACAGCTTACTTACAACGGGGTAGGCCCCAGGTaGCCCAGGTTGCCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: QEDLRLVPSNLVTQLTYNGVGPR*PRLPWE Trigger: TTCCCAGGGCAACCTGGGGCACCTGGGGCCTACCCC...GTTGTAAGTAAGCTGTGTGACCAGGTTGCTGGGAACCAGTCTCAGATCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | TCCCAGCAACCTGGTCACACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAAGCCTCCAGGAGCACTaGGGTAGGCCCCAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQQPGHTAYLQPPVTPAPSLQEH*GRPQVP Trigger: GGGCACCTGGGGCCTACCCCAGTGCTCCTGGAGGCT...TGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTGTGACCAGGTTGCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | TCACACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCAGCTCCAGGGGCAGTTaGGCCAGGATAAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SHSLLTTTCNSSSRRPGASSRGS*ARISSR Trigger: CCTGGAGCTTATCCTGGCCCAACTGCCCCTGGAGCT...GGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | TCCCAGCAACCTGGTCACACAGCTTACTTACAACCACCTGTAACTCCAGCTCCATGCCCCAGGTTGCCCTaGGAAGGCTCCAGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SQQPGHTAYLQPPVTPAPCPRLP*EGSRGS Trigger: ACTGCCCCTGGAGCCTTCCCAGGGCAACCTGGGGCA...TGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTGTGACCAGGTTGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | CCAAATCAAAGGGCATATAAAGACAGGCAGCTGGAGGCATCAGTGGACCTGACCTCCTGGGTAGGCCCCTaGAGGAGCCTGTCCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PNQRAYKDRQLEASVDLTSWVGP*RSLSWV Trigger: TACCCAGGACAGGCTCCTCCAGGGGCCTACCCAGGA...GGTCAGGTCCACTGATGCCTCCAGCTGCCTGTCTTTATATGCCCTTTGATTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142734.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGGCCTGGTGCCTCTCAAGTGAGCAGGCACCTGTACCCATGTGCACAGACACCGCAACCTTGAAGTaGTCAGCTTCAACCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: QEAWCLSSEQAPVPMCTDTATLK*SASTRT Trigger: AGTCCTGGTTGAAGCTGACCACTTCAAGGTTGCGGT...GTCTGTGCACATGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGCCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | CAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGACCGCAACCTTGAAGTaGTCAGCTTCAACCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: QSFPLLRHTGPVSVPPLLTATLK*SASTRT Trigger: AGTCCTGGTTGAAGCTGACCACTTCAAGGTTGCGGT...CAGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | CAGGAGGATCTGAGACTGGTTCCCAGCAACCTGGTCACACAGCTTACTTACAACAGCTCCAGGGGCAGTTaGGCCAGGATAAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QEDLRLVPSNLVTQLTYNSSRGS*ARISSR Trigger: CCTGGAGCTTATCCTGGCCCAACTGCCCCTGGAGCT...GTTGTAAGTAAGCTGTGTGACCAGGTTGCTGGGAACCAGTCTCAGATCCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | CAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGAAGCGGGGGTTAAAGTaGAAGGCAACATCATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QSFPLLRHTGPVSVPPLLKRGLK*KATSFP Trigger: AGGGAATGATGTTGCCTTCCACTTTAACCCCCGCTT...CAGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | AGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGCACCCGGATATCCTTaGGGGTTTGGGTTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLLTTTCNSSSRRPGASQAPGYP*GFGFPE Trigger: CTCTGGAAACCCAAACCCTCAAGGATATCCGGGTGC...TTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR GCA 90 bp | AAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGAGGCTGGTTCCCCCATaGACCCGGATATCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: KEREMQSFPLLRHTGPVSRLVPP*TRISLR Trigger: CCTCAAGGATATCCGGGTGCATGGGGGAACCAGCCT...CGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | GAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCAAGCGGGGGTTAAAGTaGAAGGCAACATCATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: EMQSFPLLRHTGPVSVPPKRGLK*KATSFP Trigger: AGGGAATGATGTTGCCTTCCACTTTAACCCCCGCTT...GGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | CAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGCATCATTCCCTCTCCTaGAATCTAGAACAATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: QSFPLLRHTGPVSVPPLLHHSLS*NLEQSC Trigger: ACAGGATTGTTCTAGATTTCAGGAGAGGGAATGATG...CAGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTCATCATTCCCTCTCCTaGAATCTAGAACAATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSHHSLS*NLEQSC Trigger: ACAGGATTGTTCTAGATTTCAGGAGAGGGAATGATG...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR GCA 90 bp | GATAAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTAGGCTGGTTCCCCCATaGACCCGGATATCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: DKEREMQSFPLLRHTGPVRLVPP*TRISLR Trigger: CCTCAAGGATATCCGGGTGCATGGGGGAACCAGCCT...AACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CCA 90 bp | GACACACAACACACAAAGTTTAAAAGGCTAGGGATGTGTAGCTCAGTGAGAGAAAGCCTCCAGGAGCACTaGGGTAGGCCCCAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DTQHTKFKRLGMCSSVRESLQEH*GRPQVP Trigger: GGGCACCTGGGGCCTACCCCAGTGCTCCTGGAGGCT...TTCTCTCACTGAGCTACACATCCCTAGCCTTTTAAACTTTGTGTGTTGTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | GAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCCAGGACTTGTATTTTaGATGGTTTGCCACTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: EMQSFPLLRHTGPVSVPPPGLVF*MVCHSQ Trigger: TTGAGAGTGGCAAACCATTCAAAATACAAGTCCTGG...GGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR TCA 90 bp | ACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGTGAGCAGGCCAGGACTTGTATTTTaGATGGTTTGCCACTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TTTCNSSSRRPGASQVSRPGLVF*MVCHSQ Trigger: TTGAGAGTGGCAAACCATTCAAAATACAAGTCCTGG...CCTGCTCACTTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CCA 90 bp | ACACAACACACAAAGTTTAAAAGGCTAGGGATGTGTAGCTCAGTGAGAGAACACAGGAGGAGCCTGTCCTaGGTAGGCCCCTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQHTKFKRLGMCSSVREHRRSLS*VGPWRS Trigger: GCTCCTCCAGGGGCCTACCCAGGACAGGCTCCTCCT...GTGTTCTCTCACTGAGCTACACATCCCTAGCCTTTTAAACTTTGTGTGTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CCA 90 bp | GACACACAACACACAAAGTTTAAAAGGCTAGGGATGTGTAGCTCAGTGAGAGAATGCCCCAGGTTGCCCTaGGAAGGCTCCAGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTQHTKFKRLGMCSSVRECPRLP*EGSRGS Trigger: ACTGCCCCTGGAGCCTTCCCAGGGCAACCTGGGGCA...TTCTCTCACTGAGCTACACATCCCTAGCCTTTTAAACTTTGTGTGTTGTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGGACTTGTATTTTGAATaGTTTGCCACTCTCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSFPLLRHTGPVSVPPLLDLYFE*FATLKG Trigger: CCCTTTGAGAGTGGCAAACCATTCAAAATACAAGTC...CAGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR TCA 90 bp | GGCATCAGTGGACCTGACCTGTCTCAGGAGGATCTGAGACTGGTTCCCAGCAACCCAGGACTTGTATTTTaGATGGTTTGCCACTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GISGPDLSQEDLRLVPSNPGLVF*MVCHSQ Trigger: TTGAGAGTGGCAAACCATTCAAAATACAAGTCCTGG...GTTGCTGGGAACCAGTCTCAGATCCTCCTGAGACAGGTCAGGTCCACTGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGATCTGAGACTGGTTCCCAGCAACCTGGTCACACAGCTTACTTACAACACCGCAACCTTGAAGTaGTCAGCTTCAACCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QEDLRLVPSNLVTQLTYNTATLK*SASTRT Trigger: AGTCCTGGTTGAAGCTGACCACTTCAAGGTTGCGGT...GTTGTAAGTAAGCTGTGTGACCAGGTTGCTGGGAACCAGTCTCAGATCCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAAACCCCCAAAGCGATGGGTATCTCTCAGCATGAGACTTTATTAAATGGATGGAGGAGCCTGTCCTaGGTAGGCCCCTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKTPKAMGISQHETLLNGWRSLS*VGPWRS Trigger: GCTCCTCCAGGGGCCTACCCAGGACAGGCTCCTCCA...TCCATTTAATAAAGTCTCATGCTGAGAGATACCCATCGCTTTGGGGGTTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAATCGTGTTACACACAATaGCTCTCCTGTTGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTTTCNSSSRRPGASQSCYTQ*LSCCSH Trigger: ATGAGAACAACAGGAGAGTCATTGTGTGTAACACGA...TTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CCA 90 bp | GATAAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTAAGCGGGGGTTAAAGTaGAAGGCAACATCATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DKEREMQSFPLLRHTGPVKRGLK*KATSFP Trigger: AGGGAATGATGTTGCCTTCCACTTTAACCCCCGCTT...AACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR TCA 90 bp | CCAAATCAAAGGGCATATAAAGACAGGCAGCTGGAGGCATCAGTGGACCTGACCCATCATTCCCTCTCCTaGAATCTAGAACAATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNQRAYKDRQLEASVDLTHHSLS*NLEQSC Trigger: ACAGGATTGTTCTAGATTTCAGGAGAGGGAATGATG...GGTCAGGTCCACTGATGCCTCCAGCTGCCTGTCTTTATATGCCCTTTGATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142734.8 |
||
| CDS-3UTR TCA 90 bp | GATAAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGTGTTACACACAATaGCTCTCCTGTTGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DKEREMQSFPLLRHTGPVSCYTQ*LSCCSH Trigger: ATGAGAACAACAGGAGAGTCATTGTGTGTAACACGA...AACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGATCTGAGACTGGTTCCCAGCAACCTGGTCACACAGCTTACTTACAACGACTTGTATTTTGAATaGTTTGCCACTCTCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QEDLRLVPSNLVTQLTYNDLYFE*FATLKG Trigger: CCCTTTGAGAGTGGCAAACCATTCAAAATACAAGTC...GTTGTAAGTAAGCTGTGTGACCAGGTTGCTGGGAACCAGTCTCAGATCCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGACTTGTATTTTGAATaGTTTGCCACTCTCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEREMQSFPLLRHTGPVSDLYFE*FATLKG Trigger: CCCTTTGAGAGTGGCAAACCATTCAAAATACAAGTC...CGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR TCA 90 bp | ATAAAAACCCCCAAAGCGATGGGTATCTCTCAGCATGAGACTTTATTAAATGGATCGTGTTACACACAATaGCTCTCCTGTTGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKTPKAMGISQHETLLNGSCYTQ*LSCCSH Trigger: ATGAGAACAACAGGAGAGTCATTGTGTGTAACACGA...TCCATTTAATAAAGTCTCATGCTGAGAGATACCCATCGCTTTGGGGGTTTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGGCCCCTGGAGGAGCTaGTCCTGGGTAGGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSGPWRS*SWVGPR Trigger: CCTGGGGCCTACCCAGGACAAGCTCCTCCAGGGGCC...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTGGCCCCTGGAGGAGCTaGTCCTGGGTAGGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLLTTTCNSSSRRPGASGPWRS*SWVGPR Trigger: CCTGGGGCCTACCCAGGACAAGCTCCTCCAGGGGCC...AGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCATATAAAGACAGGCAGCTGGAGGCATCAGTGGACCTGACCTGTCTCAGGCCCAGGTGCCCCAGGTaGCCCTGGGAAGGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAYKDRQLEASVDLTCLRPRCPR*PWEGSR Trigger: CCTGGAGCCTTCCCAGGGCAACCTGGGGCACCTGGG...CCTGAGACAGGTCAGGTCCACTGATGCCTCCAGCTGCCTGTCTTTATATGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142734.8 |
||
| CDS-3UTR CAA 90 bp | TCACACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCCCCAGGTGCCCCAGGTaGCCCTGGGAAGGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SHSLLTTTCNSSSRRPGAPRCPR*PWEGSR Trigger: CCTGGAGCCTTCCCAGGGCAACCTGGGGCACCTGGG...GGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGCCTGGTGCCTCTCAAGTGAGCAGGCACCTGTACCCATGTGCACAGACAAGCTCCAGGGGCAGTaGGGCCAGGATAAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEAWCLSSEQAPVPMCTDKLQGQ*GQDKLQ Trigger: CTGGAGCTTATCCTGGCCCAACTGCCCCTGGAGCTT...GTCTGTGCACATGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGCCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTAGGCTCCAGGGGCAGTaGAGCCAGGATAAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSRLQGQ*SQDKLQ Trigger: CTGGAGCTTATCCTGGCTCAACTGCCCCTGGAGCCT...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCCAGGTGCCCCAGGTaGCCCTGGGAAGGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EREMQSFPLLRHTGPVSVPRCPR*PWEGSR Trigger: CCTGGAGCCTTCCCAGGGCAACCTGGGGCACCTGGG...CACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTAGGCTCCAGGGGCAGTaGAGCCAGGATAAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSLLTTTCNSSSRRPGASRLQGQ*SQDKLQ Trigger: CTGGAGCTTATCCTGGCTCAACTGCCCCTGGAGCCT...AGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGATATCCTTGAGGGTTaGGGTTTCCAGAGCCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSDILEG*GFQSQL Trigger: TAGCTGGCTCTGGAAACCCAAACCCTCAAGGATATC...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCTGCACCCGGATATCCTaGAGGGTTTGGGTTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EMQSFPLLRHTGPVSVPPCTRIS*RVWVSR Trigger: TCTGGAAACCCAAACCCTCAAGGATATCCGGGTGCA...GGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | AGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAAAGCTCCAGGGGCAGTaGGGCCAGGATAAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLTTTCNSSSRRPGASQKLQGQ*GQDKLQ Trigger: CTGGAGCTTATCCTGGCCCAACTGCCCCTGGAGCTT...TTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTGCTCCTGTTGTTCTCATaGAAGCGGGGGTTAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSFPLLRHTGPVSVPPLLLLLFS*KRGLKW Trigger: CCACTTTAACCCCCGCTTCAATGAGAACAACAGGAG...CAGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTACAATGACTCTCCTGTaGTTCTCATTGAAGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSTMTLL*FSLKRG Trigger: CCCCCGCTTCAATGAGAACAACAGGAGAGTCATTGT...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | ACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGTGAGCAGGTCGTTGACCGCAACCTaGAAGTGGTCAGCTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TTTCNSSSRRPGASQVSRSLTAT*KWSAST Trigger: GGTTGAAGCTGACCACTTCAAGGTTGCGGTCAACGA...CCTGCTCACTTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | AATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCGTTGACCGCAACCTaGAAGTGGTCAGCTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: NAKFPTPKAHRAGFGAAPSLTAT*KWSAST Trigger: GGTTGAAGCTGACCACTTCAAGGTTGCGGTCAACGA...AGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCGATATCCTTGAGGGTTaGGGTTTCCAGAGCCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EMQSFPLLRHTGPVSVPPDILEG*GFQSQL Trigger: TAGCTGGCTCTGGAAACCCAAACCCTCAAGGATATC...GGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | AAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGAAGCTCCAGGGGCAGTaGGGCCAGGATAAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KEREMQSFPLLRHTGPVSKLQGQ*GQDKLQ Trigger: CTGGAGCTTATCCTGGCCCAACTGCCCCTGGAGCTT...CGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GCCTGGTGCCTCTCAAGTGAGCAGGCACCTGTACCCATGTGCACAGACACACAAACAATGACTCTCCTGTaGTTCTCATTGAAGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AWCLSSEQAPVPMCTDTQTMTLL*FSLKRG Trigger: CCCCCGCTTCAATGAGAACAACAGGAGAGTCATTGT...TTGTGTGTCTGTGCACATGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCTCCTTTCCCCAGTTATaGTCCTGCTTCGTGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: EMQSFPLLRHTGPVSVPPSFPQL*SCFVLH Trigger: GTGTAACACGAAGCAGGACAATAACTGGGGAAAGGA...GGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTGATATCCTTGAGGGTTaGGGTTTCCAGAGCCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: HSLLTTTCNSSSRRPGASDILEG*GFQSQL Trigger: TAGCTGGCTCTGGAAACCCAAACCCTCAAGGATATC...AGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGTGCACCCGGATATCCTaGAGGGTTTGGGTTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EREMQSFPLLRHTGPVSVCTRIS*RVWVSR Trigger: TCTGGAAACCCAAACCCTCAAGGATATCCGGGTGCA...CACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | CACAGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTACAATGACTCTCCTGTaGTTCTCATTGAAGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLLTTTCNSSSRRPGASTMTLL*FSLKRG Trigger: CCCCCGCTTCAATGAGAACAACAGGAGAGTCATTGT...AGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GCCTGGTGCCTCTCAAGTGAGCAGGCACCTGTACCCATGTGCACAGACACACAATCCTTTCCCCAGTTATaGTCCTGCTTCGTGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: AWCLSSEQAPVPMCTDTQSFPQL*SCFVLH Trigger: GTGTAACACGAAGCAGGACAATAACTGGGGAAAGGA...TTGTGTGTCTGTGCACATGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTACCAGGACTTGTATTTaGAATGGTTTGCCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSTRTCI*NGLPLS Trigger: TGAGAGTGGCAAACCATTCAAAATACAAGTCCTGGT...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTTCTAGCTTCAACCAGGACTaGTATTTTGAATGGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKFPTPKAHRAGFGAAPSSFNQD*YFEWFA Trigger: GGCAAACCATTCAAAATACAAGTCCTGGTTGAAGCT...AGAAGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS TCA 90 bp | CTGATTTCCCGGAGGTTCTTCATCCGATGGTTGTACTGCAGTAGGTaGGCATCGTTGACCGCAACCTTGAAGTGGTCAGCTTCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LISRRFFIRWLYCSR*ASLTATLKWSASTR Trigger: CCTGGTTGAAGCTGACCACTTCAAGGTTGCGGTCAACGATGCTCACCTACTGCAGTACAACCATCGGATGAAGAACCTCCGGGAAATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | GAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCTCCTGTTGTTCTCATaGAAGCGGGGGTTAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EREMQSFPLLRHTGPVSVLLLFS*KRGLKW Trigger: CCACTTTAACCCCCGCTTCAATGAGAACAACAGGAG...CACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
||
| CDS-3UTR CAA 90 bp | AGCTTACTTACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAACTCCTGTTGTTCTCATaGAAGCGGGGGTTAAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SLLTTTCNSSSRRPGASQLLLFS*KRGLKW Trigger: CCACTTTAACCCCCGCTTCAATGAGAACAACAGGAG...TTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGTAAGTAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CAA 90 bp | AATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGGTGCCGCCCCTAGCTTCAACCAGGACTaGTATTTTGAATGGTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: NAKFPTPKAHRAGFGAAPSFNQD*YFEWFA Trigger: GGCAAACCATTCAAAATACAAGTCCTGGTTGAAGCT...AGGGGCGGCACCGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CAA 90 bp | ACAACCACCTGTAACTCCAGCTCCAGGAGGCCTGGTGCCTCTCAAGTGAGCAGGAGCTTCAACCAGGACTaGTATTTTGAATGGTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: TTTCNSSSRRPGASQVSRSFNQD*YFEWFA Trigger: GGCAAACCATTCAAAATACAAGTCCTGGTTGAAGCT...CCTGCTCACTTGAGAGGCACCAGGCCTCCTGGAGCTGGAGTTACAGGTGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CAA 90 bp | GCCTGGTGCCTCTCAAGTGAGCAGGCACCTGTACCCATGTGCACAGACACACAAACCAGGACTTGTATTTaGAATGGTTTGCCACTCTCA | + |
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Preference number: 5 (lower is better) Translates to: AWCLSSEQAPVPMCTDTQTRTCI*NGLPLS Trigger: TGAGAGTGGCAAACCATTCAAAATACAAGTCCTGGT...TTGTGTGTCTGTGCACATGGGTACAGGTGCCTGCTCACTTGAGAGGCACCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142734.8 ENSMUST00000150290.9 |
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| CDS-3UTR CAA 90 bp | GATAAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGTTGACCGCAACCTaGAAGTGGTCAGCTTCAACC | + |
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Preference number: 5 (lower is better) Translates to: DKEREMQSFPLLRHTGPVSLTAT*KWSAST Trigger: GGTTGAAGCTGACCACTTCAAGGTTGCGGTCAACGA...AACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CAA 90 bp | AAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGTCCTTTCCCCAGTTATaGTCCTGCTTCGTGTTACAC | + |
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Preference number: 5 (lower is better) Translates to: KEREMQSFPLLRHTGPVSSFPQL*SCFVLH Trigger: GTGTAACACGAAGCAGGACAATAACTGGGGAAAGGA...CGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS-3UTR CAA 90 bp | AAGGAGAGAGAAATGCAAAGTTTCCCACTCCTAAGGCACACAGGGCCGGTTTCGACCAGGACTTGTATTTaGAATGGTTTGCCACTCTCA | + |
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Preference number: 5 (lower is better) Translates to: KEREMQSFPLLRHTGPVSTRTCI*NGLPLS Trigger: TGAGAGTGGCAAACCATTCAAAATACAAGTCCTGGT...CGAAACCGGCCCTGTGTGCCTTAGGAGTGGGAAACTTTGCATTTCTCTCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS CCA 90 bp | CACACAATGACTCTCCTGTTGTTCTCATTGAAGCGGGGGTTAAAGTaGAAGGCAACATCATTCCCTCTCCTGAAATCTAGAACAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: HTMTLLLFSLKRGLK*KATSFPLLKSRTIL Trigger: CAGGATTGTTCTAGATTTCAGGAGAGGGAATGATGTTGCCTTCCACTTTAACCCCCGCTTCAATGAGAACAACAGGAGAGTCATTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS CCA 72 bp | AGTTGGGCCGGGGTAGGCACTAGGAGGAGCCTGTCCTaGGTAGGCCCCTGGAGGAGCCTGTCCTGGGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: SWAGVGTRRSLS*VGPWRSLSWVG Trigger: GCCTACCCAGGACAGGCTCCTCCAGGGGCCTACCCAGGACAGGCTCCTCCTAGTGCCTACCCCGGCCCAACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000142734.8 ENSMUST00000144794.2 ENSMUST00000146468.4 ENSMUST00000150290.9 ENSMUST00000151405.9 |
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| CDS CCA 72 bp | TCCTCCAGGCAAGGGCAGGTCATAGGGCACCGTCAGTaGTCCAGCGGGGACACCATAAGGGCCAGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSRQGQVIGHRQ*SSGDTIRASSR Trigger: CCTGCTGCTGGCCCTTATGGTGTCCCCGCTGGACCACTGACGGTGCCCTATGACCTGCCCTTGCCTGGAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 ENSMUST00000151405.9 |
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| CDS TCA 72 bp | CGGAGGTTCTTCATCCGATGGTTGTACTGCAGTAGGTaGGCATCGTTGACCGCAACCTTGAAGTGGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RRFFIRWLYCSR*ASLTATLKWSA Trigger: AGCTGACCACTTCAAGGTTGCGGTCAACGATGCTCACCTACTGCAGTACAACCATCGGATGAAGAACCTCCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS CAA 72 bp | TTGTCCTGCTTCGTGTTACACACAATGACTCTCCTGTaGTTCTCATTGAAGCGGGGGTTAAAGTGGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSCFVLHTMTLL*FSLKRGLKWKA Trigger: TGCCTTCCACTTTAACCCCCGCTTCAATGAGAACAACAGGAGAGTCATTGTGTGTAACACGAAGCAGGACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS CAA 72 bp | ACCTTGAAGTGGTCAGCTTCAACCAGGACTTGTATTTaGAATGGTTTGCCACTCTCAAAGGGGAAGGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: TLKWSASTRTCI*NGLPLSKGKAD Trigger: GTCAGCCTTCCCCTTTGAGAGTGGCAAACCATTCAAAATACAAGTCCTGGTTGAAGCTGACCACTTCAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS CCA 72 bp | ACTCTCCTGTTGTTCTCATTGAAGCGGGGGTTAAAGTaGAAGGCAACATCATTCCCTCTCCTGAAATCTAGA | + |
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Preference number: 6 (lower is better) Translates to: TLLLFSLKRGLK*KATSFPLLKSR Trigger: TCTAGATTTCAGGAGAGGGAATGATGTTGCCTTCCACTTTAACCCCCGCTTCAATGAGAACAACAGGAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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| CDS CAA 72 bp | TTCCCTCTCCTGAAATCTAGAACAATCCTGTTTGCGTaGGGTTTCACTGTGCCCATGATTGTGATCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: FPLLKSRTILFA*GFTVPMIVISM Trigger: CATGCTGATCACAATCATGGGCACAGTGAAACCCAACGCAAACAGGATTGTTCTAGATTTCAGGAGAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000142734.8 ENSMUST00000146468.4 ENSMUST00000150290.9 |
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