RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LGALS2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000043501

Ensembl transcript IDs: ENSMUST00000044584.6

Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TATTTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGCTTGCTGGAGGGCTaGCTGAAGCTGGTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: YLTLTLGKSTDPKGCGSGGLLEG*LKLVLG
Trigger: CCCCAGAACCAGCTTCAGCCAGCCCTCCAGCAAGCC...ACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
3UTR TCA 72 bp GCTGTGGTTCTGGTGGGGGCTTGCTGGAGGGCTGGCTaGAGCTGGTTCTGGGGGCTAAGGTCTTCTGAGGTG +
Preference number: 3 (lower is better)
Translates to: AVVLVGACWRAG*SWFWGLRSSEV
Trigger: CACCTCAGAAGACCTTAGCCCCCAGAACCAGCTTCAGCCAGCCCTCCAGCAAGCCCCCACCAGAACCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CCA 90 bp AAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGGGCTTGCTGGAGGGCTGGCAGGGTTTCTTTCCCCTaGCCCAGGTTAATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KAQTLKAVVLVGACWRAGRVSFP*PRLMRK
Trigger: CTTCCTCATTAACCTGGGCCAGGGGAAAGAAACCCT...GCCAGCCCTCCAGCAAGCCCCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CCA 90 bp TTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGTGTGGCCCAGCCTGTTaGGGAAGGTCAGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LTLTLGKSTDPKGCGSGGCGPAC*GRSAGV
Trigger: GACACCAGCTGACCTTCCCCAACAGGCTGGGCCACA...CCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR TCA 90 bp GACCCTAAAGGCTGTGGTTCTGGTGGGGGCTTGCTGGAGGGCTGGCTGAAGCTGTCATGTTCAGGTCTTTaGCCTCAAATTTCTCCGACA +
Preference number: 4 (lower is better)
Translates to: DPKGCGSGGGLLEGWLKLSCSGL*PQISPT
Trigger: TGTCGGAGAAATTTGAGGTCAAAGACCTGAACATGA...CAGCTTCAGCCAGCCCTCCAGCAAGCCCCCACCAGAACCACAGCCTTTAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CCA 90 bp AAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGGGCTTGCTGGAGGGCTGGCTGGTGTTACAGACAATaGTGGATTCATCGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: KAQTLKAVVLVGACWRAGWCYRQ*WIHRSE
Trigger: CTCGCTTCGATGAATCCACCATTGTCTGTAACACCA...GCCAGCCCTCCAGCAAGCCCCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CCA 90 bp AAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGGGCTTGCTGGAGGGCTGGCCGGTCCACATCATTGTaGATCTTGCCTTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: KAQTLKAVVLVGACWRAGRSTSL*ILPLIF
Trigger: GAAGATTAAAGGCAAGATCCACAATGATGTGGACCG...GCCAGCCCTCCAGCAAGCCCCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CCA 90 bp GACCCTAAAGGCTGTGGTTCTGGTGGGGGCTTGCTGGAGGGCTGGCTGAAGCTGTTGAAGTCTTTATCTTaGAAGGTGATGGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: DPKGCGSGGGLLEGWLKLLKSLS*KVMVIL
Trigger: CAAGATCACCATCACCTTCCAAGATAAAGACTTCAA...CAGCTTCAGCCAGCCCTCCAGCAAGCCCCCACCAGAACCACAGCCTTTAGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR TCA 90 bp TATTTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTCCTCTGACCCTGGACTaGAGCACATGTGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: YLTLTLGKSTDPKGCGSGPLTLD*STCDFL
Trigger: GAGAAAATCACATGTGCTTCAGTCCAGGGTCAGAGG...ACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CCA 90 bp TATTTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTCTTCAGGGACATCCCTaGTTTCATGTTCAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: YLTLTLGKSTDPKGCGSGLQGHP*FHVQVF
Trigger: AAAGACCTGAACATGAAACCAGGGATGTCCCTGAAG...ACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CCA 90 bp TATTTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTTGTTACAGACAATGGTaGATTCATCGAAGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: YLTLTLGKSTDPKGCGSGCYRQW*IHRSEG
Trigger: ACCCTCGCTTCGATGAATCCACCATTGTCTGTAACA...ACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR GCA 90 bp TATTTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTAAGCGAGGGTTAAAATaGAGGTTGAGGGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: YLTLTLGKSTDPKGCGSGKRGLK*RLRVSF
Trigger: GAAAGAAACCCTCAACCTGCATTTTAACCCTCGCTT...ACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CAA 90 bp AAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGGGCTTGCTGGAGGGCTGGCGGGTTAAAATGCAGGTaGAGGGTTTCTTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: KAQTLKAVVLVGACWRAGGLKCR*RVSFPW
Trigger: CCAGGGGAAAGAAACCCTCAACCTGCATTTTAACCC...GCCAGCCCTCCAGCAAGCCCCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CAA 90 bp TTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGTTGTGGCCCAGCCTGTaGGGGAAGGTCAGCTGGTGT +
Preference number: 5 (lower is better)
Translates to: LTLTLGKSTDPKGCGSGGLWPSL*GKVSWC
Trigger: ACACCAGCTGACCTTCCCCAACAGGCTGGGCCACAA...CCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CAA 90 bp AAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGGGCTTGCTGGAGGGCTGGCTCAGGCAACGTCACCTaGAAGTCTTTATCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: KAQTLKAVVLVGACWRAGSGNVT*KSLSWK
Trigger: CTTCCAAGATAAAGACTTCAAGGTGACGTTGCCTGA...GCCAGCCCTCCAGCAAGCCCCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CAA 90 bp TTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGAAGGTGATGGTGATCTaGACCTCTGACCCTGGACTG +
Preference number: 5 (lower is better)
Translates to: LTLTLGKSTDPKGCGSGGKVMVI*TSDPGL
Trigger: CAGTCCAGGGTCAGAGGTCAAGATCACCATCACCTT...CCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS GCA 90 bp CTGGTGTTACAGACAATGGTGGATTCATCGAAGCGAGGGTTAAAATaGAGGTTGAGGGTTTCTTTCCCCTGGCCCAGGTTAATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LVLQTMVDSSKRGLK*RLRVSFPWPRLMRK
Trigger: CTTCCTCATTAACCTGGGCCAGGGGAAAGAAACCCTCAACCTGCATTTTAACCCTCGCTTCGATGAATCCACCATTGTCTGTAACACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CCA 90 bp TCTTTCCCCTGGCCCAGGTTAATGAGGAAGCGGTCCACATCATTGTaGATCTTGCCTTTAATCTTCAGGGACATCCCTGGTTTCATGTTC +
Preference number: 5 (lower is better)
Translates to: SFPWPRLMRKRSTSL*ILPLIFRDIPGFMF
Trigger: GAACATGAAACCAGGGATGTCCCTGAAGATTAAAGGCAAGATCCACAATGATGTGGACCGCTTCCTCATTAACCTGGGCCAGGGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS-3UTR CAA 90 bp TTGACCTTGACCTTGGGGAAAAGCACAGACCCTAAAGGCTGTGGTTCTGGTGGGTTCATGTTCAGGTCTTaGACCTCAAATTTCTCCGAC +
Preference number: 5 (lower is better)
Translates to: LTLTLGKSTDPKGCGSGGFMFRS*TSNFSD
Trigger: GTCGGAGAAATTTGAGGTCAAAGACCTGAACATGAA...CCCACCAGAACCACAGCCTTTAGGGTCTGTGCTTTTCCCCAAGGTCAAGGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CAA 90 bp TTTGAAGGAGGAGATCTGGAGCCCACCCATGCTCAAGTAGTGCAGTaGGTTGTGGCCCAGCCTGTTGGGGAAGGTCAGCTGGTGTCCGTC +
Preference number: 6 (lower is better)
Translates to: FEGGDLEPTHAQVVQ*VVAQPVGEGQLVSV
Trigger: GACGGACACCAGCTGACCTTCCCCAACAGGCTGGGCCACAACCAACTGCACTACTTGAGCATGGGTGGGCTCCAGATCTCCTCCTTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CCA 72 bp TTTCTCGTTGCTCTTGTCCCCAGCGGCCACCTTCACTaGTGTTACAGACAATGGTGGATTCATCGAAGCGAG +
Preference number: 6 (lower is better)
Translates to: FLVALVPSGHLH*CYRQWWIHRSE
Trigger: CTCGCTTCGATGAATCCACCATTGTCTGTAACACCAGTGAAGGTGGCCGCTGGGGACAAGAGCAACGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CAA 72 bp CCCTGGCCCAGGTTAATGAGGAAGCGGTCCACATCATaGTGGATCTTGCCTTTAATCTTCAGGGACATCCCT +
Preference number: 6 (lower is better)
Translates to: PWPRLMRKRSTS*WILPLIFRDIP
Trigger: AGGGATGTCCCTGAAGATTAAAGGCAAGATCCACAATGATGTGGACCGCTTCCTCATTAACCTGGGCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CAA 72 bp GGGAAGGTCAGCTGGTGTCCGTCAGGCAACGTCACCTaGAAGTCTTTATCTTGGAAGGTGATGGTGATCTTG +
Preference number: 6 (lower is better)
Translates to: GKVSWCPSGNVT*KSLSWKVMVIL
Trigger: CAAGATCACCATCACCTTCCAAGATAAAGACTTCAAGGTGACGTTGCCTGACGGACACCAGCTGACCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CAA 90 bp CCCTGGCCCAGGTTAATGAGGAAGCGGTCCACATCATTGTGGATCTaGCCTTTAATCTTCAGGGACATCCCTGGTTTCATGTTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: PWPRLMRKRSTSLWI*PLIFRDIPGFMFRS
Trigger: AGACCTGAACATGAAACCAGGGATGTCCCTGAAGATTAAAGGCAAGATCCACAATGATGTGGACCGCTTCCTCATTAACCTGGGCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS GCA 72 bp CAGACAATGGTGGATTCATCGAAGCGAGGGTTAAAATaGAGGTTGAGGGTTTCTTTCCCCTGGCCCAGGTTA +
Preference number: 6 (lower is better)
Translates to: QTMVDSSKRGLK*RLRVSFPWPRL
Trigger: TAACCTGGGCCAGGGGAAAGAAACCCTCAACCTGCATTTTAACCCTCGCTTCGATGAATCCACCATTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CCA 72 bp TGGCCCAGGTTAATGAGGAAGCGGTCCACATCATTGTaGATCTTGCCTTTAATCTTCAGGGACATCCCTGGT +
Preference number: 6 (lower is better)
Translates to: WPRLMRKRSTSL*ILPLIFRDIPG
Trigger: ACCAGGGATGTCCCTGAAGATTAAAGGCAAGATCCACAATGATGTGGACCGCTTCCTCATTAACCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CCA 72 bp TGTCCGTCAGGCAACGTCACCTTGAAGTCTTTATCTTaGAAGGTGATGGTGATCTTGACCTCTGACCCTGGA +
Preference number: 6 (lower is better)
Translates to: CPSGNVTLKSLS*KVMVILTSDPG
Trigger: TCCAGGGTCAGAGGTCAAGATCACCATCACCTTCCAAGATAAAGACTTCAAGGTGACGTTGCCTGACGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CAA 90 bp GTTTCTTTCCCCTGGCCCAGGTTAATGAGGAAGCGGTCCACATCATaGTGGATCTTGCCTTTAATCTTCAGGGACATCCCTGGTTTCATG +
Preference number: 6 (lower is better)
Translates to: VSFPWPRLMRKRSTS*WILPLIFRDIPGFM
Trigger: CATGAAACCAGGGATGTCCCTGAAGATTAAAGGCAAGATCCACAATGATGTGGACCGCTTCCTCATTAACCTGGGCCAGGGGAAAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6
CDS CCA 72 bp ATTGTGGATCTTGCCTTTAATCTTCAGGGACATCCCTaGTTTCATGTTCAGGTCTTTGACCTCAAATTTCTC +
Preference number: 6 (lower is better)
Translates to: IVDLAFNLQGHP*FHVQVFDLKFL
Trigger: GAGAAATTTGAGGTCAAAGACCTGAACATGAAACCAGGGATGTCCCTGAAGATTAAAGGCAAGATCCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044584.6