Pregenerated sensors for LGALS12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024972Ensembl transcript IDs: ENSMUST00000079902.6, ENSMUST00000099729.10, ENSMUST00000159983.8
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGTGTGCGCGCGCCCTTTGAGATGTGAGCTCGGCCTGACAAAGTaGTGCCAGGTCAGTTTCTCCCTTGAGAATAGGAGAATGGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: CVCARPLRCELGLTK*CQVSFSLENRRMGC Trigger: ACAGCCCATTCTCCTATTCTCAAGGGAGAAACTGACCTGGCATCACTTTGTCAGGCCGAGCTCACATCTCAAAGGGCGCGCGCACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR CCA 90 bp | GTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATaGGATTACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTT | + |
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Preference number: 1 (lower is better) Translates to: VSSTVCTRAQLWAGR*DYRNIPRRQSLKSL Trigger: AAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR CCA 90 bp | AATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTaGGCAGGTAGATGGGATTACAGAAACATTCCCAGGAGACAGAGT | + |
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Preference number: 1 (lower is better) Translates to: NPSSVSSTVCTRAQL*AGRWDYRNIPRRQS Trigger: ACTCTGTCTCCTGGGAATGTTTCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR CCA 90 bp | ATTTGGGGCTCATCTTGTTCACACTCTATTTGCCTTCTCAGTGGCTaGGCCTGGATTGGAATGAAGACCAAGACAGAATTTGAATGTGGA | + |
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Preference number: 1 (lower is better) Translates to: IWGSSCSHSICLLSG*AWIGMKTKTEFECG Trigger: TCCACATTCAAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAATAGAGTGTGAACAAGATGAGCCCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR CCA 90 bp | AGACAGAATTTGAATGTGGAAGATAGATGCAGAGACACATTGACCTaGGCCCTTATTTTCAGAATTGATAGATTAAAATGCAATGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: RQNLNVEDRCRDTLT*ALIFRIDRLKCNVC Trigger: ACACACATTGCATTTTAATCTATCAATTCTGAAAATAAGGGCCCAGGTCAATGTGTCTCTGCATCTATCTTCCACATTCAAATTCTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR CCA 90 bp | TCTGCTAGATACAGTCATGTATCATTTCATGACAAGGACAAATTCTaGGAAATGCATTGTTTGACCATTTGGCCATTGTATAGATATTGC | + |
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Preference number: 1 (lower is better) Translates to: SARYSHVSFHDKDKF*EMHCLTIWPLYRYC Trigger: GCAATATCTATACAATGGCCAAATGGTCAAACAATGCATTTCCCAGAATTTGTCCTTGTCATGAAATGATACATGACTGTATCTAGCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGCTGTGGAGCCCTGGTTaGAGCCGCCCCTCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KSFISIFYSVYPGTALGRLWSPG*SRPSSS Trigger: AGAAGAGGAGGGGCGGCTGCAACCAGGGCTCCACAG...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGGTAACTGTGGAGCCCTaGTTGCAGCCGCCCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: QQILHQYLLQCVPGHSSGVTVEP*LQPPLL Trigger: GAGGAGGGGCGGCTGCAACCAGGGCTCCACAGTTAC...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGGCGCCCTTTGAGATGTaGGCTCGGCCTGACAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KSFISIFYSVYPGTALGRAPFEM*ARPDKV Trigger: CACTTTGTCAGGCCGAGCTCACATCTCAAAGGGCGC...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGAGTGTGTGTGTGTGTGTaGGCGCGCCCTTTGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRVCVCV*ARPLRC Trigger: ACATCTCAAAGGGCGCGCGCACACACACACACACAC...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTGTAACTGTGGAGCCCTaGTTGCAGCCGCCCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFVTVEP*LQPPLL Trigger: GAGGAGGGGCGGCTGCAACCAGGGCTCCACAGTTAC...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGATGTTCACACTCTATTTaGCTTCTCAGTGGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRCSHSI*LLSGWA Trigger: GGCCCAGCCACTGAGAAGGCAAATAGAGTGTGAACA...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCGTAACTGTGGAGCCCTaGTTGCAGCCGCCCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KGECRWCVLITDLGLILFVTVEP*LQPPLL Trigger: GAGGAGGGGCGGCTGCAACCAGGGCTCCACAGTTAC...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTGCCTTCTCAGTGGCTaGGCCTGGATTGGAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: KSFISIFYSVYPGTALGRCLLSG*AWIGMK Trigger: CTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCA...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGAGGGCCTGGATTGGAATaGAGACCAAGACAGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRGPGLE*RPRQNL Trigger: CAAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCC...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCTGTGGAGCCCTGGTTaGAGCCGCCCCTCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRLWSPG*SRPSSS Trigger: AGAAGAGGAGGGGCGGCTGCAACCAGGGCTCCACAG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGATTGAGAATAGGAGAATaGGCTGTAACTGTGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRLRIGE*AVTVEP Trigger: GGGCTCCACAGTTACAGCCCATTCTCCTATTCTCAA...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR CAA 90 bp | GGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTaGTTCACACTCTATTTGCCTTCTCAGTGGCTGGGCCTGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: GECRWCVLITDLGLI*FTLYLPSQWLGLDW Trigger: CCAATCCAGGCCCAGCCACTGAGAAGGCAAATAGAGTGTGAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGGGGCCTGGATTGGAATaGAGACCAAGACAGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: QQILHQYLLQCVPGHSSGGPGLE*RPRQNL Trigger: CAAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCC...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGGTAGATGGTGTGTGTTaGTCACAGATTTGGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: QQILHQYLLQCVPGHSSGVDGVC*SQIWGS Trigger: TGAGCCCCAAATCTGTGATCAACACACACCATCTAC...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGAGTTTACATGGTTGGGTaGCCAAAAGGTCCCATAATC | + |
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Preference number: 2 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRVYMVG*PKGPII Trigger: GATTATGGGACCTTTTGGTCACCCAACCATGTAAAC...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGTGTTTTCCTAGGATGTaGCTGGTTCCCTTTGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: QQILHQYLLQCVPGHSSGCFPRM*LVPFGQ Trigger: TTGGCCAAAGGGAACCAGCCACATCCTAGGAAAACA...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGCTTCCTTTTTCCTaGTCTACCTGCTCTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: QQILHQYLLQCVPGHSSGQLPFS*STCSAR Trigger: TCTAGCAGAGCAGGTAGACCAGGAAAAAGGAAGCTG...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGCAGCTTCCTTTTTCCTaGTCTACCTGCTCTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: KSFISIFYSVYPGTALGRQLPFS*STCSAR Trigger: TCTAGCAGAGCAGGTAGACCAGGAAAAAGGAAGCTG...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGGCGCCCTTTGAGATGTaGGCTCGGCCTGACAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRAPFEM*ARPDKV Trigger: CACTTTGTCAGGCCGAGCTCACATCTCAAAGGGCGC...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGGTTTACATGGTTGGGTaGCCAAAAGGTCCCATAATC | + |
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Preference number: 2 (lower is better) Translates to: KSFISIFYSVYPGTALGRVYMVG*PKGPII Trigger: GATTATGGGACCTTTTGGTCACCCAACCATGTAAAC...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCGTGTGTGTGTGTGTGTaGGCGCGCCCTTTGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: KGECRWCVLITDLGLILFVCVCV*ARPLRC Trigger: ACATCTCAAAGGGCGCGCGCACACACACACACACAC...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGAGGGAAATGCATTGTTTaGCCATTTGGCCATTGTATA | + |
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Preference number: 2 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRGKCIV*PFGHCI Trigger: TATACAATGGCCAAATGGTCAAACAATGCATTTCCC...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGAATGTGGAAGATAGATaGAGAGACACATTGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: QQILHQYLLQCVPGHSSGNVEDR*RDTLTW Trigger: CCAGGTCAATGTGTCTCTGCATCTATCTTCCACATT...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCCTCAGTGGCTGGGCCTaGATTGGAATGAAGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: KGECRWCVLITDLGLILFLSGWA*IGMKTK Trigger: CTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAG...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTGTTGTTTACATGGTTaGGTGACCAAAAGGTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: KSFISIFYSVYPGTALGRCCLHG*VTKRSH Trigger: ATGGGACCTTTTGGTCACCCAACCATGTAAACAACA...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGTGTTGTTTACATGGTTaGGTGACCAAAAGGTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: QQILHQYLLQCVPGHSSGCCLHG*VTKRSH Trigger: ATGGGACCTTTTGGTCACCCAACCATGTAAACAACA...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCGCGCCCTTTGAGATGTaGGCTCGGCCTGACAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TETFPGDRVLSHFRFKVSAPFEM*ARPDKV Trigger: CACTTTGTCAGGCCGAGCTCACATCTCAAAGGGCGC...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGGTGTGTGTGTGTGTGTaGGCGCGCCCTTTGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: NSSNQTLYSFLFPGLPALVCVCV*ARPLRC Trigger: ACATCTCAAAGGGCGCGCGCACACACACACACACAC...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCTCAGTGGCTGGGCCTaGATTGGAATGAAGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRLSGWA*IGMKTK Trigger: CTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGTGCCTTCTCAGTGGCTaGGCCTGGATTGGAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRCLLSG*AWIGMK Trigger: CTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCA...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGATTATTGTTGTTTACATaGTTGGGTGACCAAAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRLLLFT*LGDQKV Trigger: GACCTTTTGGTCACCCAACCATGTAAACAACAATAA...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGCCATTGTATAGATATTaGAGGGTATGCTGTAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: KSFISIFYSVYPGTALGRPLYRY*RVCCRN Trigger: GTTTCTACAGCATACCCTGCAATATCTATACAATGG...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCTTGAGAATAGGAGAATaGGCTGTAACTGTGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KGECRWCVLITDLGLILFLRIGE*AVTVEP Trigger: GGGCTCCACAGTTACAGCCCATTCTCCTATTCTCAA...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCTATTTGCCTTCTCAGTaGCTGGGCCTGGATTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: KGECRWCVLITDLGLILFYLPSQ*LGLDWN Trigger: ATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAATA...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| 3UTR-3UTR GCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGTGTTCACACTCTATTTaGCTTCTCAGTGGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: NSSNQTLYSFLFPGLPALCSHSI*LLSGWA Trigger: GGCCCAGCCACTGAGAAGGCAAATAGAGTGTGAACA...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTTGCCTTCTCAGTGGCTaGGCCTGGATTGGAATGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCCLLSG*AWIGMK Trigger: CTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCA...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGTATTTGCCTTCTCAGTaGCTGGGCCTGGATTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRYLPSQ*LGLDWN Trigger: ATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAATA...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGGGGCCTGGATTGGAATaGAGACCAAGACAGAATTTG | + |
|
Preference number: 2 (lower is better) Translates to: NSSNQTLYSFLFPGLPALGPGLE*RPRQNL Trigger: CAAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCC...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGGTAGATGGTGTGTGTTaGTCACAGATTTGGGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: NSSNQTLYSFLFPGLPALVDGVC*SQIWGS Trigger: TGAGCCCCAAATCTGTGATCAACACACACCATCTAC...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGGTTTACATGGTTGGGTaGCCAAAAGGTCCCATAATC | + |
|
Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRVYMVG*PKGPII Trigger: GATTATGGGACCTTTTGGTCACCCAACCATGTAAAC...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCGTAGATGGTGTGTGTTaGTCACAGATTTGGGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TETFPGDRVLSHFRFKVSVDGVC*SQIWGS Trigger: TGAGCCCCAAATCTGTGATCAACACACACCATCTAC...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGTGTTGTTTACATGGTTaGGTGACCAAAAGGTCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRCCLHG*VTKRSH Trigger: ATGGGACCTTTTGGTCACCCAACCATGTAAACAACA...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGGACCAAGACAGAATTTaGATGTGGAAGATAGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRDQDRI*MWKIDA Trigger: TGCATCTATCTTCCACATTCAAATTCTGTCTTGGTC...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGGGGAAATGCATTGTTTaGCCATTTGGCCATTGTATA | + |
|
Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRGKCIV*PFGHCI Trigger: TATACAATGGCCAAATGGTCAAACAATGCATTTCCC...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR GCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGAATGTGGAAGATAGATaGAGAGACACATTGACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: NSSNQTLYSFLFPGLPALNVEDR*RDTLTW Trigger: CCAGGTCAATGTGTCTCTGCATCTATCTTCCACATT...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTAATGTGGAAGATAGATaGAGAGACACATTGACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCNVEDR*RDTLTW Trigger: CCAGGTCAATGTGTCTCTGCATCTATCTTCCACATT...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCCATTGTATAGATATTaGAGGGTATGCTGTAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRPLYRY*RVCCRN Trigger: GTTTCTACAGCATACCCTGCAATATCTATACAATGG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCAGACTGAATAATCCCTaGCCCACCCAGACTATATTA | + |
|
Preference number: 2 (lower is better) Translates to: TETFPGDRVLSHFRFKVSRLNNP*PTQTIL Trigger: TAATATAGTCTGGGTGGGCCAGGGATTATTCAGTCT...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTGACCAAGACAGAATTTaGATGTGGAAGATAGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCDQDRI*MWKIDA Trigger: TGCATCTATCTTCCACATTCAAATTCTGTCTTGGTC...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGATATTTTGTTCACTTTaGGCAAAGGCTTCACAAACT | + |
|
Preference number: 2 (lower is better) Translates to: FPGLPALLDTVMYHFMTRIFCSL*AKASQT Trigger: AGTTTGTGAAGCCTTTGCCCAAAGTGAACAAAATAT...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGATATTTTGTTCACTTTaGGCAAAGGCTTCACAAACT | + |
|
Preference number: 2 (lower is better) Translates to: NSSNQTLYSFLFPGLPALIFCSL*AKASQT Trigger: AGTTTGTGAAGCCTTTGCCCAAAGTGAACAAAATAT...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCTTATTGTTGTTTACATaGTTGGGTGACCAAAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: TETFPGDRVLSHFRFKVSLLLFT*LGDQKV Trigger: GACCTTTTGGTCACCCAACCATGTAAACAACAATAA...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CAA 90 bp | AGACCAAGACAGAATTTGAATGTGGAAGATAGATGCAGAGACACATaGACCTGGGCCCTTATTTTCAGAATTGATAGATTAAAATGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: RPRQNLNVEDRCRDT*TWALIFRIDRLKCN Trigger: ATTGCATTTTAATCTATCAATTCTGAAAATAAGGGCCCAGGTCAATGTGTCTCTGCATCTATCTTCCACATTCAAATTCTGTCTTGGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | TTGAGAATAGGAGAATGGGCTGTAACTGTGGAGCCCTaGTTGCAGCCGCCCCTCCTCTTCTCTGGCGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LRIGEWAVTVEP*LQPPLLFSGGG Trigger: ACCCCCGCCAGAGAAGAGGAGGGGCGGCTGCAACCAGGGCTCCACAGTTACAGCCCATTCTCCTATTCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGGTGTGCGCGCGCCCTTaGAGATGTGAGCTCGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSFISIFYSVYPGTALGRVCARP*RCELGL Trigger: CAGGCCGAGCTCACATCTCAAAGGGCGCGCGCACAC...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGGCGCGCCCTTTGAGATGTGAGCTCGGCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCV*ARPLRCELGLT Trigger: TGTCAGGCCGAGCTCACATCTCAAAGGGCGCGCGCACACACACACACACACACACACACACACACACACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | GATGCCAGGTCAGTTTCTCCCTTGAGAATAGGAGAATaGGCTGTAACTGTGGAGCCCTGGTTGCAGCCGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DARSVSPLRIGE*AVTVEPWLQPP Trigger: GGGCGGCTGCAACCAGGGCTCCACAGTTACAGCCCATTCTCCTATTCTCAAGGGAGAAACTGACCTGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR TCA 72 bp | GCGCGCCCTTTGAGATGTGAGCTCGGCCTGACAAAGTaGTGCCAGGTCAGTTTCTCCCTTGAGAATAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARPLRCELGLTK*CQVSFSLENRR Trigger: TCTCCTATTCTCAAGGGAGAAACTGACCTGGCATCACTTTGTCAGGCCGAGCTCACATCTCAAAGGGCGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | ACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATaGGATTACAGAAACATTCCCAGGAGACAGAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TVCTRAQLWAGR*DYRNIPRRQSL Trigger: AAGACTCTGTCTCCTGGGAATGTTTCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGGTGTGCGCGCGCCCTTaGAGATGTGAGCTCGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FPGLPALLDTVMYHFMTRVCARP*RCELGL Trigger: CAGGCCGAGCTCACATCTCAAAGGGCGCGCGCACAC...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGATGTAGATGGTGTGTGTaGATCACAGATTTGGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRCRWCV*ITDLGL Trigger: GAGCCCCAAATCTGTGATCAACACACACCATCTACA...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | TCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTaGGCAGGTAGATGGGATTACAGAAACATTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SVSSTVCTRAQL*AGRWDYRNIPR Trigger: CCTGGGAATGTTTCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGAGATGCAGAGACACATaGACCTGGGCCCTTATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QQILHQYLLQCVPGHSSGRCRDT*TWALIF Trigger: GAAAATAAGGGCCCAGGTCAATGTGTCTCTGCATCT...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGAGATGCAGAGACACATaGACCTGGGCCCTTATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KSFISIFYSVYPGTALGRRCRDT*TWALIF Trigger: GAAAATAAGGGCCCAGGTCAATGTGTCTCTGCATCT...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGTGTAGATGGTGTGTGTaGATCACAGATTTGGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QQILHQYLLQCVPGHSSGCRWCV*ITDLGL Trigger: GAGCCCCAAATCTGTGATCAACACACACCATCTACA...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGATTGTTGTTTACATGGTaGGGTGACCAAAAGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRLLFTW*GDQKVP Trigger: TGGGACCTTTTGGTCACCCAACCATGTAAACAACAA...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGGATTTGGGGCTCATCTaGTTCACACTCTATTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QQILHQYLLQCVPGHSSGDLGLI*FTLYLP Trigger: AGGCAAATAGAGTGTGAACAAGATGAGCCCCAAATC...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGTTGTTGTTTACATGGTaGGGTGACCAAAAGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QQILHQYLLQCVPGHSSGLLFTW*GDQKVP Trigger: TGGGACCTTTTGGTCACCCAACCATGTAAACAACAA...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGAAGACCAAGACAGAATTaGAATGTGGAAGATAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRRPRQN*NVEDRC Trigger: GCATCTATCTTCCACATTCAAATTCTGTCTTGGTCT...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTAGGTCAGTTTCTCCCTaGAGAATAGGAGAATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFRSVSP*RIGEWA Trigger: AGCCCATTCTCCTATTCTCAAGGGAGAAACTGACCT...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGTGTGGCTGGTTCCCTTaGGCCAAAACCATGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FPGLPALLDTVMYHFMTRCGWFP*AKTMKA Trigger: TGCTTTCATGGTTTTGGCCAAAGGGAACCAGCCACA...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGTATGAGAGATTATTGTaGTTTACATGGTTGGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QQILHQYLLQCVPGHSSGYERLL*FTWLGD Trigger: GTCACCCAACCATGTAAACAACAATAATCTCTCATA...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | TGTTCACACTCTATTTGCCTTCTCAGTGGCTGGGCCTaGATTGGAATGAAGACCAAGACAGAATTTGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: CSHSICLLSGWA*IGMKTKTEFEC Trigger: ACATTCAAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAATAGAGTGTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | TCATCTTGTTCACACTCTATTTGCCTTCTCAGTGGCTaGGCCTGGATTGGAATGAAGACCAAGACAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: SSCSHSICLLSG*AWIGMKTKTEF Trigger: AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAATAGAGTGTGAACAAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGAGGTCAGTTTCTCCCTaGAGAATAGGAGAATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NSSNQTLYSFLFPGLPALRSVSP*RIGEWA Trigger: AGCCCATTCTCCTATTCTCAAGGGAGAAACTGACCT...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGAGCAGCTGTGATATTTaGTTCACTTTGGGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FPGLPALLDTVMYHFMTRSSCDI*FTLGKG Trigger: GCCTTTGCCCAAAGTGAACAAAATATCACAGCTGCT...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCTGTGGCTGGTTCCCTTaGGCCAAAACCATGAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TETFPGDRVLSHFRFKVSCGWFP*AKTMKA Trigger: TGCTTTCATGGTTTTGGCCAAAGGGAACCAGCCACA...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCAGGTCAGTTTCTCCCTaGAGAATAGGAGAATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TETFPGDRVLSHFRFKVSRSVSP*RIGEWA Trigger: AGCCCATTCTCCTATTCTCAAGGGAGAAACTGACCT...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGAGCAGCTGTGATATTTaGTTCACTTTGGGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NSSNQTLYSFLFPGLPALSSCDI*FTLGKG Trigger: GCCTTTGCCCAAAGTGAACAAAATATCACAGCTGCT...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCGATTTGGGGCTCATCTaGTTCACACTCTATTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TETFPGDRVLSHFRFKVSDLGLI*FTLYLP Trigger: AGGCAAATAGAGTGTGAACAAGATGAGCCCCAAATC...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCAGCAGCTGTGATATTTaGTTCACTTTGGGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TETFPGDRVLSHFRFKVSSSCDI*FTLGKG Trigger: GCCTTTGCCCAAAGTGAACAAAATATCACAGCTGCT...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGGATATTTTGTTCACTTaGGGCAAAGGCTTCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NSSNQTLYSFLFPGLPALDILFT*GKGFTN Trigger: GTTTGTGAAGCCTTTGCCCAAAGTGAACAAAATATC...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTAGACCAAGACAGAATTaGAATGTGGAAGATAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCRPRQN*NVEDRC Trigger: GCATCTATCTTCCACATTCAAATTCTGTCTTGGTCT...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCGATATTTTGTTCACTTaGGGCAAAGGCTTCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TETFPGDRVLSHFRFKVSDILFT*GKGFTN Trigger: GTTTGTGAAGCCTTTGCCCAAAGTGAACAAAATATC...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCTTGACCATTTGGCCATaGTATAGATATTGCAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TETFPGDRVLSHFRFKVSLTIWP*YRYCRV Trigger: TACCCTGCAATATCTATACAATGGCCAAATGGTCAA...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | AAGGACAAATTCTGGGAAATGCATTGTTTGACCATTTaGCCATTGTATAGATATTGCAGGGTATGCTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KDKFWEMHCLTI*PLYRYCRVCCR Trigger: TCTACAGCATACCCTGCAATATCTATACAATGGCCAAATGGTCAAACAATGCATTTCCCAGAATTTGTCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR TCA 72 bp | TTCATGACAAGGACAAATTCTGGGAAATGCATTGTTTaGCCATTTGGCCATTGTATAGATATTGCAGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FMTRTNSGKCIV*PFGHCIDIAGY Trigger: ATACCCTGCAATATCTATACAATGGCCAAATGGTCAAACAATGCATTTCCCAGAATTTGTCCTTGTCATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | TTGAATGTGGAAGATAGATGCAGAGACACATTGACCTaGGCCCTTATTTTCAGAATTGATAGATTAAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LNVEDRCRDTLT*ALIFRIDRLKC Trigger: GCATTTTAATCTATCAATTCTGAAAATAAGGGCCCAGGTCAATGTGTCTCTGCATCTATCTTCCACATTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | TTCCTTTATGAAAGGTACATGATCAATCTTGGTAAATaGACAAGGGAAGAAAACGGCTCTTTGCTTAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLYERYMINLGK*TREENGSLLRV Trigger: TACTCTAAGCAAAGAGCCGTTTTCTTCCCTTGTCCATTTACCAAGATTGATCATGTACCTTTCATAAAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CCA 72 bp | TACAGTCATGTATCATTTCATGACAAGGACAAATTCTaGGAAATGCATTGTTTGACCATTTGGCCATTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YSHVSFHDKDKF*EMHCLTIWPLY Trigger: ATACAATGGCCAAATGGTCAAACAATGCATTTCCCAGAATTTGTCCTTGTCATGAAATGATACATGACTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGAAAGGGTATCTACCCGTaGCAGTGGGAGCCGGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRKGIYP*QWEPVA Trigger: CGCTACCGGCTCCCACTGTCACGGGTAGATACCCTT...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGCTGAGCTCCCGCAGCTaGTCCAGGGCTTTCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSFISIFYSVYPGTALGRLSSRS*SRAFWS Trigger: GGACCAGAAAGCCCTGGAGCAGCTGCGGGAGCTCAG...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGAGCGGAAGGCAACATCTaGCTGAGGATGCAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRAEGNI*LRMQAA Trigger: TGCTGCCTGCATCCTCAGCCAGATGTTGCCTTCCGC...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGAGTCCTCGAACTACAATaGCTTGCCCAGGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRVLELQ*LAQARD Trigger: GTCTCTGGCCTGGGCAAGTCATTGTAGTTCGAGGAC...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGCACCTGAAACCTCCTTaGATGCAGAGGGACCACACC | + |
|
Preference number: 4 (lower is better) Translates to: KSFISIFYSVYPGTALGRHLKPP*MQRDHT Trigger: GGTGTGGTCCCTCTGCATGCAAGGAGGTTTCAGGTG...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGCGAACTACAATGACTTaGCCAGGCCAGAGACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSFISIFYSVYPGTALGRRTTMT*PGQRPR Trigger: TCGGGGTCTCTGGCCTGGGCAAGTCATTGTAGTTCG...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTCTGAGCTCCCGCAGCTaGTCCAGGGCTTTCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFLSSRS*SRAFWS Trigger: GGACCAGAAAGCCCTGGAGCAGCTGCGGGAGCTCAG...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGATCACAGGAACATGGGTaGTCCCATCCTTCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRSQEHG*SHPSGS Trigger: TGAGCCTGAAGGATGGGACCACCCATGTTCCTGTGA...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTAAGAATCGCTGGGGGTaGAAGAGGAAGGGGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFKNRWG*KRKGAE Trigger: CTCCGCCCCCTTCCTCTTTCACCCCCAGCGATTCTT...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCGTGGCCCCCAGCCCCTaGCCATTGAGTGCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGECRWCVLITDLGLILFVAPSP*PLSANF Trigger: GAAGTTGGCACTCAATGGGCAGGGGCTGGGGGCCAC...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGTGCCAGAGTCCACCTTaGTGGGTGTTGCAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: QQILHQYLLQCVPGHSSGCQSPP*WVLQMT Trigger: TGTCATCTGCAACACCCACCAAGGTGGACTCTGGCA...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGTCACAGGAACATGGGTaGTCCCATCCTTCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQILHQYLLQCVPGHSSGSQEHG*SHPSGS Trigger: TGAGCCTGAAGGATGGGACCACCCATGTTCCTGTGA...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGAGTGTCACAGGAACATaGGTGGTCCCATCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFISIFYSVYPGTALGRSVTGT*VVPSFR Trigger: CCTGAAGGATGGGACCACCCATGTTCCTGTGACACT...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGAGTGTCACAGGAACATaGGTGGTCCCATCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQILHQYLLQCVPGHSSGSVTGT*VVPSFR Trigger: CCTGAAGGATGGGACCACCCATGTTCCTGTGACACT...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGCCGAGGAAGAGCACGTaGGCAGGGCACCTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSSNQTLYSFLFPGLPALPRKST*AGHLQP Trigger: AGGCTGGAGGTGCCCTGCTCACGTGCTCTTCCTCGG...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGGTGGCCCCCAGCCCCTaGCCATTGAGTGCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPGLPALLDTVMYHFMTRVAPSP*PLSANF Trigger: GAAGTTGGCACTCAATGGGCAGGGGCTGGGGGCCAC...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCTGGCGGCTGCAGGATaGAGCTGTCAGGAATCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPGLPALLDTVMYHFMTRLAAAG*SCQESG Trigger: ACCCGATTCCTGACAGCTTCATCCTGCAGCCGCCAG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGACAGCAGGAAGGGATTaGTGTTCAGGAATCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KSFISIFYSVYPGTALGRTAGRD*CSGIQQ Trigger: CTGTTGGATTCCTGAACATCAATCCCTTCCTGCTGT...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079902.6 |
||
| CDS-3UTR TCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCCCGAGGAAGAGCACGTaGGCAGGGCACCTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TETFPGDRVLSHFRFKVSPRKST*AGHLQP Trigger: AGGCTGGAGGTGCCCTGCTCACGTGCTCTTCCTCGG...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGCGTGACCATCTTGCCTaGATACAGGCCACCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSFISIFYSVYPGTALGRRDHLA*IQATKN Trigger: ATTTTTGGTGGCCTGTATGCAGGCAAGATGGTCACG...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGGTGGCCCCCAGCCCCTaGCCATTGAGTGCCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSSNQTLYSFLFPGLPALVAPSP*PLSANF Trigger: GAAGTTGGCACTCAATGGGCAGGGGCTGGGGGCCAC...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAAAGAGAAAGAGAATaGGGAAGCTATCCCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQILHQYLLQCVPGHSSGQRERE*GSYPLS Trigger: AGAGAGGGGATAGCTTCCTCATTCTCTTTCTCTTTG...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTAGATGGGATTACAGACACCAAAAATTGTTGTaGCATAAGGAATCACCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVCTRAQLWAGRWDYRHQKLL*HKESPG Trigger: ACCCGGTGATTCCTTATGGCACAACAATTTTTGGTG...TCTGTAATCCCATCTACCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTCACCGGATCTCTTTTTaGCAGAGTCCACCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFHRISF*QSPPWW Trigger: CCACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTG...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTCTGAGCTCCCGCAGCTaGTCCAGGGCTTTCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCLSSRS*SRAFWS Trigger: GGACCAGAAAGCCCTGGAGCAGCTGCGGGAGCTCAG...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTCAGAGTCCACCTTGGTaGGTGTTGCAGATGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFQSPPW*VLQMTW Trigger: CCATGTCATCTGCAACACCCACCAAGGTGGACTCTG...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGGCTACCCTCCACAAATaGATTGATGTTCAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QQILHQYLLQCVPGHSSGATLHK*IDVQES Trigger: GGATTCCTGAACATCAATCCATTTGTGGAGGGTAGC...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CAA 72 bp | AGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTaGTTCACACTCTATTTGCCTTCTCAGTGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWCVLITDLGLI*FTLYLPSQWLG Trigger: GCCCAGCCACTGAGAAGGCAAATAGAGTGTGAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCCTGGCGGCTGCAGGATaGAGCTGTCAGGAATCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TETFPGDRVLSHFRFKVSLAAAG*SCQESG Trigger: ACCCGATTCCTGACAGCTTCATCCTGCAGCCGCCAG...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGGTCCTCGAACTACAATaGCTTGCCCAGGCCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPGLPALLDTVMYHFMTRVLELQ*LAQARD Trigger: GTCTCTGGCCTGGGCAAGTCATTGTAGTTCGAGGAC...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCAAGAATCGCTGGGGGTaGAAGAGGAAGGGGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TETFPGDRVLSHFRFKVSKNRWG*KRKGAE Trigger: CTCCGCCCCCTTCCTCTTTCACCCCCAGCGATTCTT...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCACCAAAAATTGTTGTaGCATAAGGAATCACCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQILHQYLLQCVPGHSSGHQKLL*HKESPG Trigger: ACCCGGTGATTCCTTATGGCACAACAATTTTTGGTG...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCACCTGAAACCTCCTTaGATGCAGAGGGACCACACC | + |
|
Preference number: 4 (lower is better) Translates to: FPGLPALLDTVMYHFMTRHLKPP*MQRDHT Trigger: GGTGTGGTCCCTCTGCATGCAAGGAGGTTTCAGGTG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCTCACAGGAACATGGGTaGTCCCATCCTTCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGECRWCVLITDLGLILFSQEHG*SHPSGS Trigger: TGAGCCTGAAGGATGGGACCACCCATGTTCCTGTGA...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCAGTGTCACAGGAACATaGGTGGTCCCATCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGECRWCVLITDLGLILFSVTGT*VVPSFR Trigger: CCTGAAGGATGGGACCACCCATGTTCCTGTGACACT...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCACCGGATCTCTTTTTaGCAGAGTCCACCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPGLPALLDTVMYHFMTRHRISF*QSPPWW Trigger: CCACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGCGAACTACAATGACTTaGCCAGGCCAGAGACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSSNQTLYSFLFPGLPALRTTMT*PGQRPR Trigger: TCGGGGTCTCTGGCCTGGGCAAGTCATTGTAGTTCG...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTGCGGAAGGCAACATCTaGCTGAGGATGCAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCAEGNI*LRMQAA Trigger: TGCTGCCTGCATCCTCAGCCAGATGTTGCCTTCCGC...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCGCGGAAGGCAACATCTaGCTGAGGATGCAGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TETFPGDRVLSHFRFKVSAEGNI*LRMQAA Trigger: TGCTGCCTGCATCCTCAGCCAGATGTTGCCTTCCGC...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CAA 72 bp | ATCACAGATTTGGGGCTCATCTTGTTCACACTCTATTaGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITDLGLILFTLY*PSQWLGLDWNE Trigger: TTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAATAGAGTGTGAACAAGATGAGCCCCAAATCTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTCCTCCACAAATGGATTaGTGTTCAGGAATCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFPPQMD*CSGIQQ Trigger: CTGTTGGATTCCTGAACATCAATCCATTTGTGGAGG...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTCGAACTACAATGACTTaGCCAGGCCAGAGACCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCRTTMT*PGQRPR Trigger: TCGGGGTCTCTGGCCTGGGCAAGTCATTGTAGTTCG...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTCAACTGGATACTCTCTaGTACCCTCCACAAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFQLDTL*YPPQMD Trigger: ATCCATTTGTGGAGGGTAGCAGAGAGTATCCAGTTG...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGCAGAGTCCACCTTGGTaGGTGTTGCAGATGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: NSSNQTLYSFLFPGLPALQSPPW*VLQMTW Trigger: CCATGTCATCTGCAACACCCACCAAGGTGGACTCTG...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTGCTACCCTCCACAAATaGATTGATGTTCAGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFATLHK*IDVQES Trigger: GGATTCCTGAACATCAATCCATTTGTGGAGGGTAGC...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCGTGACCATCTTGCCTaGATACAGGCCACCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPGLPALLDTVMYHFMTRRDHLA*IQATKN Trigger: ATTTTTGGTGGCCTGTATGCAGGCAAGATGGTCACG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCCACCGGATCTCTTTTTaGCAGAGTCCACCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TETFPGDRVLSHFRFKVSHRISF*QSPPWW Trigger: CCACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTG...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTTGCCAGAGTCCACCTTaGTGGGTGTTGCAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCCQSPP*WVLQMT Trigger: TGTCATCTGCAACACCCACCAAGGTGGACTCTGGCA...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCTGCCAGAGTCCACCTTaGTGGGTGTTGCAGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: TETFPGDRVLSHFRFKVSCQSPP*WVLQMT Trigger: TGTCATCTGCAACACCCACCAAGGTGGACTCTGGCA...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCAACTGGATACTCTCTaGTACCCTCCACAAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPGLPALLDTVMYHFMTRQLDTL*YPPQMD Trigger: ATCCATTTGTGGAGGGTAGCAGAGAGTATCCAGTTG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CAA 72 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTaGGGGCTCATCTTGTTCACACTCTATTTGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGECRWCVLITD*GLILFTLYLPS Trigger: AGAAGGCAAATAGAGTGTGAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR TCA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTCAAAGAGAAAGAGAATaGGGAAGCTATCCCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCQRERE*GSYPLS Trigger: AGAGAGGGGATAGCTTCCTCATTCTCTTTCTCTTTG...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR GCA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGCACCAAAAATTGTTGTaGCATAAGGAATCACCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSNQTLYSFLFPGLPALHQKLL*HKESPG Trigger: ACCCGGTGATTCCTTATGGCACAACAATTTTTGGTG...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| 3UTR CAA 72 bp | TTTCATGACAAGGACAAATTCTGGGAAATGCATTGTTaGACCATTTGGCCATTGTATAGATATTGCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FHDKDKFWEMHC*TIWPLYRYCRV Trigger: TACCCTGCAATATCTATACAATGGCCAAATGGTCAAACAATGCATTTCCCAGAATTTGTCCTTGTCATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS CCA 90 bp | GCCAGAGACCCCGAGGAAGAGCACGTGAGCAGGGCACCTCCAGCCTaGGGCTATACAGCAGGAAGGGATATCCAACTGGATACTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARDPEEEHVSRAPPA*GYTAGRDIQLDTLC Trigger: GCAGAGAGTATCCAGTTGGATATCCCTTCCTGCTGTATAGCCCCAGGCTGGAGGTGCCCTGCTCACGTGCTCTTCCTCGGGGTCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS CCA 90 bp | GGGCTTGACAGTGTAGAATCGAGGGCTGAAGCGGAAGGCAACATCTaGCTGAGGATGCAGGCAGCACCCACACTGGAAGTCCACCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLDSVESRAEAEGNI*LRMQAAPTLEVHLK Trigger: TTTCAGGTGGACTTCCAGTGTGGGTGCTGCCTGCATCCTCAGCCAGATGTTGCCTTCCGCTTCAGCCCTCGATTCTACACTGTCAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCCCAGCCCCTGCCCATaGAGTGCCAACTTCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QQILHQYLLQCVPGHSSGPSPCP*SANFSP Trigger: AGGGCTGAAGTTGGCACTCAATGGGCAGGGGCTGGG...CCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS GCA 90 bp | AAATCTTTCGGCTCTTTCAAGACCAGTCCTCGAACTACAATGACTTaGCCAGGCCAGAGACCCCGAGGAAGAGCACGTGAGCAGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: KSFGSFKTSPRTTMT*PGQRPRGRAREQGT Trigger: GGTGCCCTGCTCACGTGCTCTTCCTCGGGGTCTCTGGCCTGGGCAAGTCATTGTAGTTCGAGGACTGGTCTTGAAAGAGCCGAAAGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS GCA 90 bp | CCTTGCATGCAGAGGGACCACACCCTGCAGCGTGACCATCTTGCCTaGATACAGGCCACCAAAAATTGTTGTGCCATAAGGAATCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: PCMQRDHTLQRDHLA*IQATKNCCAIRNHR Trigger: CCGGTGATTCCTTATGGCACAACAATTTTTGGTGGCCTGTATGCAGGCAAGATGGTCACGCTGCAGGGTGTGGTCCCTCTGCATGCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS CCA 90 bp | GCCACCAAAAATTGTTGTGCCATAAGGAATCACCGGGTGGAAGACTaGCGGCTGCAGGATGAAGCTGTCAGGAATCGGGTCCAGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATKNCCAIRNHRVED*RLQDEAVRNRVQVF Trigger: GAACACCTGGACCCGATTCCTGACAGCTTCATCCTGCAGCCGCCAGTCTTCCACCCGGTGATTCCTTATGGCACAACAATTTTTGGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGCCACCTTGGTGGGTGTaGCAGATGACATGGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSFISIFYSVYPGTALGRPPWWV*QMTWGL Trigger: CAAGCCCCATGTCATCTGCAACACCCACCAAGGTGG...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CAA 90 bp | AAATCCTTCATCAGTATCTTCTACAGTGTGTACCCGGGCACAGCTCTGGGCAGGTTGCCAGAGTCCACCTaGGTGGGTGTTGCAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: KSFISIFYSVYPGTALGRLPEST*VGVADD Trigger: GTCATCTGCAACACCCACCAAGGTGGACTCTGGCAA...CCTGCCCAGAGCTGTGCCCGGGTACACACTGTAGAAGATACTGATGAAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS TCA 90 bp | GTGAGCAGGGCACCTCCAGCCTGGGGCTATACAGCAGGAAGGGATTaGTGTTCAGGAATCCAACAGCCTTTACCAAGATGTCACCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: VSRAPPAWGYTAGRD*CSGIQQPLPRCHQI Trigger: TATCTGGTGACATCTTGGTAAAGGCTGTTGGATTCCTGAACATCAATCCCTTCCTGCTGTATAGCCCCAGGCTGGAGGTGCCCTGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079902.6 |
||
| CDS CCA 90 bp | GGGCACCTCCAGCCTGGGGCTATACAGCAGGAAGGGATATCCAACTaGATACTCTCTGCTACCCTCCACAAATGGATTGATGTTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GHLQPGAIQQEGISN*ILSATLHKWIDVQE Trigger: TTCCTGAACATCAATCCATTTGTGGAGGGTAGCAGAGAGTATCCAGTTGGATATCCCTTCCTGCTGTATAGCCCCAGGCTGGAGGTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS TCA 90 bp | AGCCTTTACCAAGATGTCACCAGATATGTCAAGGGTATCTACCCGTaGCAGTGGGAGCCGGTAGCGGTAGTGAAGAAAGTGCTGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SLYQDVTRYVKGIYP*QWEPVAVVKKVLAI Trigger: AATGGCCAGCACTTTCTTCACTACCGCTACCGGCTCCCACTGTCACGGGTAGATACCCTTGACATATCTGGTGACATCTTGGTAAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGTCGAACTACAATGACTaGCCCAGGCCAGAGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: FPGLPALLDTVMYHFMTRSNYND*PRPETP Trigger: CGGGGTCTCTGGCCTGGGCAAGTCATTGTAGTTCGA...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCCACCGGATCTCTTTTaGCCAGAGTCCACCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPGLPALLDTVMYHFMTRPPDLF*PESTLV Trigger: CACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTGG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGCCTTCTCAGTGGCTGGGCCTGGATTGGAATGAAGACCAAGACAGAATTTGGCCACCAAAAATTGTaGTGCCATAAGGAATCACCG | + |
|
Preference number: 5 (lower is better) Translates to: ICLLSGWAWIGMKTKTEFGHQKL*CHKESP Trigger: CGGTGATTCCTTATGGCACAACAATTTTTGGTGGCC...AAATTCTGTCTTGGTCTTCATTCCAATCCAGGCCCAGCCACTGAGAAGGCAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CAA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGTTGCCAGAGTCCACCTaGGTGGGTGTTGCAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSSNQTLYSFLFPGLPALLPEST*VGVADD Trigger: GTCATCTGCAACACCCACCAAGGTGGACTCTGGCAA...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCTCGAACTACAATGACTaGCCCAGGCCAGAGACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TETFPGDRVLSHFRFKVSSNYND*PRPETP Trigger: CGGGGTCTCTGGCCTGGGCAAGTCATTGTAGTTCGA...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS-3UTR CAA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCGGCCACCAAAAATTGTaGTGCCATAAGGAATCACCG | + |
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Preference number: 5 (lower is better) Translates to: KGECRWCVLITDLGLILFGHQKL*CHKESP Trigger: CGGTGATTCCTTATGGCACAACAATTTTTGGTGGCC...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS-3UTR CAA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTTTGCCAGAGTCCACCTaGGTGGGTGTTGCAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCLPEST*VGVADD Trigger: GTCATCTGCAACACCCACCAAGGTGGACTCTGGCAA...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS-3UTR CAA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTCCACCGGATCTCTTTTaGCCAGAGTCCACCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCPPDLF*PESTLV Trigger: CACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTGG...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS-3UTR CAA 90 bp | AAAGGTGAGTGTAGATGGTGTGTGTTGATCACAGATTTGGGGCTCATCTTGTTCACAGGCCACCAAAAATaGTTGTGCCATAAGGAATCA | + |
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Preference number: 5 (lower is better) Translates to: KGECRWCVLITDLGLILFTGHQK*LCHKES Trigger: TGATTCCTTATGGCACAACAATTTTTGGTGGCCTGT...GAACAAGATGAGCCCCAAATCTGTGATCAACACACACCATCTACACTCACCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS-3UTR CAA 90 bp | TTTCCTGGTCTACCTGCTCTGCTAGATACAGTCATGTATCATTTCATGACAAGGCCCTCCACAAATGGATaGATGTTCAGGAATCCAACA | + |
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Preference number: 5 (lower is better) Translates to: FPGLPALLDTVMYHFMTRPSTNG*MFRNPT Trigger: TGTTGGATTCCTGAACATCAATCCATTTGTGGAGGG...CCTTGTCATGAAATGATACATGACTGTATCTAGCAGAGCAGGTAGACCAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS-3UTR CAA 90 bp | AGAGATTATTGTTGTTTACATGGTTGGGTGACCAAAAGGTCCCATAATCAGTGTGGCCACCAAAAATTGTaGTGCCATAAGGAATCACCG | + |
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Preference number: 5 (lower is better) Translates to: RDYCCLHGWVTKRSHNQCGHQKL*CHKESP Trigger: CGGTGATTCCTTATGGCACAACAATTTTTGGTGGCC...ACACTGATTATGGGACCTTTTGGTCACCCAACCATGTAAACAACAATAATCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS-3UTR CAA 90 bp | AATAGTTCAAATCAAACACTCTACAGCTTCCTTTTTCCTGGTCTACCTGCTCTGTACAGCAGGAAGGGATaGATGTTCAGGAATCCAACA | + |
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Preference number: 5 (lower is better) Translates to: NSSNQTLYSFLFPGLPALYSRKG*MFRNPT Trigger: TGTTGGATTCCTGAACATCAATCCCTTCCTGCTGTA...CAGAGCAGGTAGACCAGGAAAAAGGAAGCTGTAGAGTGTTTGATTTGAACTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079902.6 |
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| CDS-3UTR CAA 90 bp | ACAGAAACATTCCCAGGAGACAGAGTCTTAAGTCACTTTAGATTTAAAGTGAGCCCCTCCACAAATGGATaGATGTTCAGGAATCCAACA | + |
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Preference number: 5 (lower is better) Translates to: TETFPGDRVLSHFRFKVSPSTNG*MFRNPT Trigger: TGTTGGATTCCTGAACATCAATCCATTTGTGGAGGG...GCTCACTTTAAATCTAAAGTGACTTAAGACTCTGTCTCCTGGGAATGTTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS GCA 72 bp | CTCTGCAGGGCGACCCCTGGCCACCGGATCTCTTTTTaGCAGAGTCCACCTTGGTGGGTGTTGCAGATGACA | + |
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Preference number: 6 (lower is better) Translates to: LCRATPGHRISF*QSPPWWVLQMT Trigger: TGTCATCTGCAACACCCACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTGGCCAGGGGTCGCCCTGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CCA 72 bp | CCCGAGGAAGAGCACGTGAGCAGGGCACCTCCAGCCTaGGGCTATACAGCAGGAAGGGATATCCAACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PEEEHVSRAPPA*GYTAGRDIQLD Trigger: ATCCAGTTGGATATCCCTTCCTGCTGTATAGCCCCAGGCTGGAGGTGCCCTGCTCACGTGCTCTTCCTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CAA 72 bp | TCTCTGCAGGGCGACCCCTGGCCACCGGATCTCTTTTaGCCAGAGTCCACCTTGGTGGGTGTTGCAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: SLQGDPWPPDLF*PESTLVGVADD Trigger: GTCATCTGCAACACCCACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTGGCCAGGGGTCGCCCTGCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS TCA 72 bp | AAGGAATCACCGGGTGGAAGACTGGCGGCTGCAGGATaGAGCTGTCAGGAATCGGGTCCAGGTGTTCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: KESPGGRLAAAG*SCQESGPGVRQ Trigger: CTGACGAACACCTGGACCCGATTCCTGACAGCTTCATCCTGCAGCCGCCAGTCTTCCACCCGGTGATTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS GCA 72 bp | GGCTCTTTCAAGACCAGTCCTCGAACTACAATGACTTaGCCAGGCCAGAGACCCCGAGGAAGAGCACGTGAG | + |
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Preference number: 6 (lower is better) Translates to: GSFKTSPRTTMT*PGQRPRGRARE Trigger: CTCACGTGCTCTTCCTCGGGGTCTCTGGCCTGGGCAAGTCATTGTAGTTCGAGGACTGGTCTTGAAAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CCA 72 bp | AGTGTAGAATCGAGGGCTGAAGCGGAAGGCAACATCTaGCTGAGGATGCAGGCAGCACCCACACTGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SVESRAEAEGNI*LRMQAAPTLEV Trigger: GACTTCCAGTGTGGGTGCTGCCTGCATCCTCAGCCAGATGTTGCCTTCCGCTTCAGCCCTCGATTCTACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CCA 72 bp | CCTGGCCACCGGATCTCTTTTTGCCAGAGTCCACCTTaGTGGGTGTTGCAGATGACATGGGGCTTGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: PGHRISFCQSPP*WVLQMTWGLTV Trigger: CACTGTCAAGCCCCATGTCATCTGCAACACCCACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTGGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CAA 72 bp | CCCTGGCCACCGGATCTCTTTTTGCCAGAGTCCACCTaGGTGGGTGTTGCAGATGACATGGGGCTTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: PWPPDLFLPEST*VGVADDMGLDS Trigger: ACTGTCAAGCCCCATGTCATCTGCAACACCCACCAAGGTGGACTCTGGCAAAAAGAGATCCGGTGGCCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS TCA 72 bp | CTTTCGGCTCTTTCAAGACCAGTCCTCGAACTACAATaGCTTGCCCAGGCCAGAGACCCCGAGGAAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LSALSRPVLELQ*LAQARDPEEEH Trigger: GTGCTCTTCCTCGGGGTCTCTGGCCTGGGCAAGTCATTGTAGTTCGAGGACTGGTCTTGAAAGAGCCGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CAA 72 bp | GCATGCAGAGGGACCACACCCTGCAGCGTGACCATCTaGCCTGCATACAGGCCACCAAAAATTGTTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: ACRGTTPCSVTI*PAYRPPKIVVP Trigger: TGGCACAACAATTTTTGGTGGCCTGTATGCAGGCAAGATGGTCACGCTGCAGGGTGTGGTCCCTCTGCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS GCA 72 bp | CAGAGGGACCACACCCTGCAGCGTGACCATCTTGCCTaGATACAGGCCACCAAAAATTGTTGTGCCATAAGG | + |
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Preference number: 6 (lower is better) Translates to: QRDHTLQRDHLA*IQATKNCCAIR Trigger: CCTTATGGCACAACAATTTTTGGTGGCCTGTATGCAGGCAAGATGGTCACGCTGCAGGGTGTGGTCCCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CCA 72 bp | AATTGTTGTGCCATAAGGAATCACCGGGTGGAAGACTaGCGGCTGCAGGATGAAGCTGTCAGGAATCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: NCCAIRNHRVED*RLQDEAVRNRV Trigger: GACCCGATTCCTGACAGCTTCATCCTGCAGCCGCCAGTCTTCCACCCGGTGATTCCTTATGGCACAACAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CAA 90 bp | CGTGAGCAGGGCACCTCCAGCCTGGGGCTATACAGCAGGAAGGGATaGATGTTCAGGAATCCAACAGCCTTTACCAAGATGTCACCAGAT | + |
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Preference number: 6 (lower is better) Translates to: REQGTSSLGLYSRKG*MFRNPTAFTKMSPD Trigger: ATCTGGTGACATCTTGGTAAAGGCTGTTGGATTCCTGAACATCAATCCCTTCCTGCTGTATAGCCCCAGGCTGGAGGTGCCCTGCTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079902.6 |
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| CDS GCA 72 bp | CCATCTTGCCTGCATACAGGCCACCAAAAATTGTTGTaGCATAAGGAATCACCGGGTGGAAGACTGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: PSCLHTGHQKLL*HKESPGGRLAA Trigger: AGCCGCCAGTCTTCCACCCGGTGATTCCTTATGGCACAACAATTTTTGGTGGCCTGTATGCAGGCAAGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS CAA 72 bp | GGCACCTCCAGCCTGGGGCTATACAGCAGGAAGGGATaGATGTTCAGGAATCCAACAGCCTTTACCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: GTSSLGLYSRKG*MFRNPTAFTKM Trigger: CATCTTGGTAAAGGCTGTTGGATTCCTGAACATCAATCCCTTCCTGCTGTATAGCCCCAGGCTGGAGGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079902.6 |
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| CDS TCA 72 bp | CAAGATGTCACCAGATATGTCAAGGGTATCTACCCGTaGCAGTGGGAGCCGGTAGCGGTAGTGAAGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: QDVTRYVKGIYP*QWEPVAVVKKV Trigger: CACTTTCTTCACTACCGCTACCGGCTCCCACTGTCACGGGTAGATACCCTTGACATATCTGGTGACATCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079902.6 ENSMUST00000099729.10 ENSMUST00000159983.8 |
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| CDS TCA 72 bp | GCACCTCCAGCCTGGGGCTATACAGCAGGAAGGGATTaGTGTTCAGGAATCCAACAGCCTTTACCAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: APPAWGYTAGRD*CSGIQQPLPRC Trigger: ACATCTTGGTAAAGGCTGTTGGATTCCTGAACATCAATCCCTTCCTGCTGTATAGCCCCAGGCTGGAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079902.6 |
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| CDS CCA 72 bp | CAGCCTGGGGCTATACAGCAGGAAGGGATATCCAACTaGATACTCTCTGCTACCCTCCACAAATGGATTGAT | + |
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Preference number: 6 (lower is better) Translates to: QPGAIQQEGISN*ILSATLHKWID Trigger: ATCAATCCATTTGTGGAGGGTAGCAGAGAGTATCCAGTTGGATATCCCTTCCTGCTGTATAGCCCCAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099729.10 ENSMUST00000159983.8 |
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