Pregenerated sensors for LGALS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068220Ensembl transcript IDs: ENSMUST00000089377.6, ENSMUST00000229159.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGCCTGGTCAAAGGTGATGCACACCTCTGTGATGCTCCCGGGCTaGAAGGGGAAGGCAGGTTCCCGGTGTTCGGTTCCCCAGGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SAWSKVMHTSVMLPG*KGKAGSRCSVPQVP Trigger: TGGGACCTGGGGAACCGAACACCGGGAACCTGCCTTCCCCTTCCAGCCCGGGAGCATCACAGAGGTGTGCATCACCTTTGACCAGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 90 bp | GGGACACTGGCTCACCCTCTGTGGTCACTTAAGCCCTCTCTGTGCTaGGCTCTCTTTGGCCTGGAAAGCACAAGAGAGGTCACTGAGACC | + |
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Preference number: 1 (lower is better) Translates to: GTLAHPLWSLKPSLC*ALFGLESTREVTET Trigger: GGTCTCAGTGACCTCTCTTGTGCTTTCCAGGCCAAAGAGAGCCCAGCACAGAGAGGGCTTAAGTGACCACAGAGGGTGAGCCAGTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR CCA 90 bp | GGCCTCCATGTTGAGGCGGTTGGGGAACTTGAATTCATGTCCGTCTaGCAGCTTGATGGTCAGGTCAGCCTGGTCAAAGGTGATGCACAC | + |
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Preference number: 1 (lower is better) Translates to: GLHVEAVGELEFMSV*QLDGQVSLVKGDAH Trigger: GTGTGCATCACCTTTGACCAGGCTGACCTGACCATCAAGCTGCCAGACGGACATGAATTCAAGTTCCCCAACCGCCTCAACATGGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 90 bp | TTGCTGTCTTTTCCCAGGTTCAGCACAAAGTTTCTATCCCAGCTCTaGGGAGACGAGACATGTGGGTCTTCGTGGAGGCCAGCCTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LLSFPRFSTKFLSQL*GDETCGSSWRPAWS Trigger: TGACCAGGCTGGCCTCCACGAAGACCCACATGTCTCGTCTCCCCAGAGCTGGGATAGAAACTTTGTGCTGAACCTGGGAAAAGACAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 90 bp | GTTCAGCACAAAGTTTCTATCCCAGCTCTGGGGAGACGAGACATGTaGGTCTTCGTGGAGGCCAGCCTGGTCAACACAGATTCCATGCTA | + |
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Preference number: 1 (lower is better) Translates to: VQHKVSIPALGRRDM*VFVEASLVNTDSML Trigger: TAGCATGGAATCTGTGTTGACCAGGCTGGCCTCCACGAAGACCCACATGTCTCGTCTCCCCAGAGCTGGGATAGAAACTTTGTGCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 90 bp | GTCCCATCTTCCTTGGTGTTACACACAATGGTGTTGGCGTCTCCATaGGCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: VPSSLVLHTMVLASP*ALKRGLKCRHRLLL Trigger: CAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGAAGATGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR TCA 90 bp | CCCGGGCTGGAAGGGGAAGGCAGGTTCCCGGTGTTCGGTTCCCCAGGTCCCATCGGCAGCTGCCTTTATTaGGGGCTACAGGCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PGLEGEGRFPVFGSPGPIGSCLY*GLQAGW Trigger: CCAGCCAGCCTGTAGCCCTCAATAAAGGCAGCTGCC...GATGGGACCTGGGGAACCGAACACCGGGAACCTGCCTTCCCCTTCCAGCCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGGCTGGAAGGGGAAGGCAGGTTCCCGGTGTTCGGTTCCCCAGGTCCCATCTGGGAGACGAGACATGTaGGTCTTCGTGGAGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PGWKGKAGSRCSVPQVPSGRRDM*VFVEAS Trigger: GCTGGCCTCCACGAAGACCCACATGTCTCGTCTCCC...AGATGGGACCTGGGGAACCGAACACCGGGAACCTGCCTTCCCCTTCCAGCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCGGCAGCTGCCTTTATTaGGGGCTACAGGCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PPTALSLSQWDTGSPSVVGSCLY*GLQAGW Trigger: CCAGCCAGCCTGTAGCCCTCAATAAAGGCAGCTGCC...GACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCAAGCCCTCTCTGTGCTaGGCTCTCTTTGGCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PPTALSLSQWDTGSPSVVKPSLC*ALFGLE Trigger: TTCCAGGCCAAAGAGAGCCCAGCACAGAGAGGGCTT...GACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGTTCATCCATCCACCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTTAAGCCCTCTCTGTaGTGGGCTCTCTTTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: AVHPSTSHCSVPVTVGHWLKPSL*WALFGL Trigger: CAGGCCAAAGAGAGCCCAGCACAGAGAGGGCTTAAG...CCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGGTGGATGGATGAACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR CAA 90 bp | GGGAAGGCAGGTTCCCGGTGTTCGGTTCCCCAGGTCCCATCTTCCTaGGTGTTACACACAATGGTGTTGGCGTCTCCATGGGCATTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GKAGSRCSVPQVPSS*VLHTMVLASPWALK Trigger: CTTCAATGCCCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGAAGATGGGACCTGGGGAACCGAACACCGGGAACCTGCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGTGATGCACACCTCTGTGATGCTCCCGGGCTGGAAGGGGAAGGCAGGTTCGTGTTGGCGTCTCCATaGGCATTGAAGCGAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: KGDAHLCDAPGLEGEGRFVLASP*ALKRGL Trigger: CAATCCTCGCTTCAATGCCCATGGAGACGCCAACAC...GAACCTGCCTTCCCCTTCCAGCCCGGGAGCATCACAGAGGTGTGCATCACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR TCA 90 bp | CTACAGGCTGGCTGGCTTCACTCAAAGGCCACGCACTTAATCTTGAAGTCTCCAGTCCGTCTGGCAGCTTaGTGGTCAGGTCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LQAGWLHSKATHLILKSPVRLAA*WSGQPG Trigger: ACCAGGCTGACCTGACCATCAAGCTGCCAGACGGAC...TGGAGACTTCAAGATTAAGTGCGTGGCCTTTGAGTGAAGCCAGCCAGCCTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCCTCCATGTTGAGGCGGTTGGGGAACTTGAATTCATGTCCGTCTGGCAGACATGTGGGTCTTCGTaGAGGCCAGCCTGGTCAACA | + |
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Preference number: 2 (lower is better) Translates to: DGLHVEAVGELEFMSVWQTCGSS*RPAWST Trigger: TGTTGACCAGGCTGGCCTCCACGAAGACCCACATGT...CTGCCAGACGGACATGAATTCAAGTTCCCCAACCGCCTCAACATGGAGGCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 90 bp | TCGGTTCCCCAGGTCCCATCTTCCTTGGTGTTACACACAATGGTGTaGGCGTCTCCATGGGCATTGAAGCGAGGATTGAAGTGTAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SVPQVPSSLVLHTMV*ASPWALKRGLKCRH Trigger: GTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGAAGATGGGACCTGGGGAACCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 90 bp | ATGTTGAGGCGGTTGGGGAACTTGAATTCATGTCCGTCTGGCAGCTaGATGGTCAGGTCAGCCTGGTCAAAGGTGATGCACACCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: MLRRLGNLNSCPSGS*MVRSAWSKVMHTSV Trigger: CACAGAGGTGTGCATCACCTTTGACCAGGCTGACCTGACCATCAAGCTGCCAGACGGACATGAATTCAAGTTCCCCAACCGCCTCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCACTTAAGGAACACATGGAGGCATaGATGGAAGTGAAGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLCPCHSGTLAHPLWSLKEHMEA*MEVKMD Trigger: GTCCATCTTCACTTCCATTCATGCCTCCATGTGTTC...CTTAAGTGACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCACGCACTTAATCTTGAAGTCTCCATCCGCCGCCATGTAGTTGATGGCATGGTCAGGTCAGCCTaGTCAAAGGTGATGCACACC | + |
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Preference number: 2 (lower is better) Translates to: KGHALNLEVSIRRHVVDGMVRSA*SKVMHT Trigger: GGTGTGCATCACCTTTGACCAGGCTGACCTGACCAT...GCCATCAACTACATGGCGGCGGATGGAGACTTCAAGATTAAGTGCGTGGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGGGCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTTGCTGTCTTTTTCGTGGAGGCCAGCCTaGTCAACACAGATTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: PWALKRGLKCRHRLLLSFSWRPA*STQIPC Trigger: GCATGGAATCTGTGTTGACCAGGCTGGCCTCCACGA...AAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 90 bp | GCGTCTCCATGGGCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTaGTTGCTGTCTTTTCCCAGGTTCAGCACAAAGTTTCTATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ASPWALKRGLKCRHR*LLSFPRFSTKFLSQ Trigger: CTGGGATAGAAACTTTGTGCTGAACCTGGGAAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 90 bp | TTACACACAATGGTGTTGGCGTCTCCATGGGCATTGAAGCGAGGATaGAAGTGTAGGCACAGGTTGTTGCTGTCTTTTCCCAGGTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LHTMVLASPWALKRG*KCRHRLLLSFPRFS Trigger: GCTGAACCTGGGAAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGCCAACACCATTGTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR GCA 90 bp | CTACAGGCTGGCTGGCTTCACTCAAAGGCCACGCACTTAATCTTGAAGTCTCCAGTAGGCACAGGTTGTTaGTGTCTTTTCCCAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LQAGWLHSKATHLILKSPVGTGC*CLFPGS Trigger: TGAACCTGGGAAAAGACAGCAACAACCTGTGCCTAC...TGGAGACTTCAAGATTAAGTGCGTGGCCTTTGAGTGAAGCCAGCCAGCCTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 90 bp | TCTCCATGGGCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTaGCTGTCTTTTCCCAGGTTCAGCACAAAGTTTCTATCCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SPWALKRGLKCRHRL*LSFPRFSTKFLSQL Trigger: GAGCTGGGATAGAAACTTTGTGCTGAACCTGGGAAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 90 bp | TCTTCCTTGGTGTTACACACAATGGTGTTGGCGTCTCCATGGGCATaGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTTGCTGTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SSLVLHTMVLASPWA*KRGLKCRHRLLLSF Trigger: AAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 72 bp | TCAAAGGTGATGCACACCTCTGTGATGCTCCCGGGCTaGAAGGGGAAGGCAGGTTCCCGGTGTTCGGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: SKVMHTSVMLPG*KGKAGSRCSVP Trigger: GGGAACCGAACACCGGGAACCTGCCTTCCCCTTCCAGCCCGGGAGCATCACAGAGGTGTGCATCACCTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 72 bp | ACCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTaGCTCACCCTCTGTGGTCACTTAAGCCCTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TSHCSVPVTVGH*LTLCGHLSPLC Trigger: ACAGAGAGGGCTTAAGTGACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR CCA 72 bp | GCTCACCCTCTGTGGTCACTTAAGCCCTCTCTGTGCTaGGCTCTCTTTGGCCTGGAAAGCACAAGAGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: AHPLWSLKPSLC*ALFGLESTREV Trigger: GACCTCTCTTGTGCTTTCCAGGCCAAAGAGAGCCCAGCACAGAGAGGGCTTAAGTGACCACAGAGGGTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR CCA 72 bp | GTTCCCGGTGTTCGGTTCCCCAGGTCCCATCTTCCTTaGTGTTACACACAATGGTGTTGGCGTCTCCATGGG | + |
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Preference number: 3 (lower is better) Translates to: VPGVRFPRSHLP*CYTQWCWRLHG Trigger: CCCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGAAGATGGGACCTGGGGAACCGAACACCGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 72 bp | TCATGTCCGTCTGGCAGCTTGATGGTCAGGTCAGCCTaGTCAAAGGTGATGCACACCTCTGTGATGCTCCCG | + |
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Preference number: 3 (lower is better) Translates to: SCPSGSLMVRSA*SKVMHTSVMLP Trigger: CGGGAGCATCACAGAGGTGTGCATCACCTTTGACCAGGCTGACCTGACCATCAAGCTGCCAGACGGACATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 72 bp | AAAGTTTCTATCCCAGCTCTGGGGAGACGAGACATGTaGGTCTTCGTGGAGGCCAGCCTGGTCAACACAGAT | + |
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Preference number: 3 (lower is better) Translates to: KVSIPALGRRDM*VFVEASLVNTD Trigger: ATCTGTGTTGACCAGGCTGGCCTCCACGAAGACCCACATGTCTCGTCTCCCCAGAGCTGGGATAGAAACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 72 bp | GTTGAGGCGGTTGGGGAACTTGAATTCATGTCCGTCTaGCAGCTTGATGGTCAGGTCAGCCTGGTCAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: VEAVGELEFMSV*QLDGQVSLVKG Trigger: ACCTTTGACCAGGCTGACCTGACCATCAAGCTGCCAGACGGACATGAATTCAAGTTCCCCAACCGCCTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 72 bp | GAGCAGAGGCAGCTGCCTTTATTGAGGGCTACAGGCTaGCTGGCTTCACTCAAAGGCCACGCACTTAATCTT | + |
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Preference number: 3 (lower is better) Translates to: EQRQLPLLRATG*LASLKGHALNL Trigger: AAGATTAAGTGCGTGGCCTTTGAGTGAAGCCAGCCAGCCTGTAGCCCTCAATAAAGGCAGCTGCCTCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 72 bp | CACTTAAGCCCTCTCTGTGCTGGGCTCTCTTTGGCCTaGAAAGCACAAGAGAGGTCACTGAGACCAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: HLSPLCAGLSLA*KAQERSLRPRT Trigger: TGTTCTTGGTCTCAGTGACCTCTCTTGTGCTTTCCAGGCCAAAGAGAGCCCAGCACAGAGAGGGCTTAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR-3UTR CAA 90 bp | GGGAACTTGAATTCATGTCCGTCTGGCAGCTTGATGGTCAGGTCAGCCTGGTCATGTAGGCACAGGTTGTaGCTGTCTTTTCCCAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: GNLNSCPSGSLMVRSAWSCRHRL*LSFPRF Trigger: GAACCTGGGAAAAGACAGCAACAACCTGTGCCTACA...TGACCAGGCTGACCTGACCATCAAGCTGCCAGACGGACATGAATTCAAGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAATTCATGTCCGTCTGGCAGCTTGATGGTCAGGTCAGCCTGGTCAAAGGTGAAGTGTAGGCACAGGTaGTTGCTGTCTTTTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LNSCPSGSLMVRSAWSKVKCRHR*LLSFPR Trigger: CCTGGGAAAAGACAGCAACAACCTGTGCCTACACTT...CACCTTTGACCAGGCTGACCTGACCATCAAGCTGCCAGACGGACATGAATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CCA 72 bp | TCCTTGGTGTTACACACAATGGTGTTGGCGTCTCCATaGGCATTGAAGCGAGGATTGAAGTGTAGGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: SLVLHTMVLASP*ALKRGLKCRHR Trigger: CCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| CDS-3UTR CCA 90 bp | GTCTCCATCCGCCGCCATGTAGTTGATGGCCTCCATGTTGAGGCGGTTGGGGAAGGAGACCCTGTCTCTTaGCGTCCGAGGCCACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VSIRRHVVDGLHVEAVGEGDPVS*RPRPPL Trigger: GAGAGGTGGCCTCGGACGCCAAGAGACAGGGTCTCC...TTCCCCAACCGCCTCAACATGGAGGCCATCAACTACATGGCGGCGGATGGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| CDS-3UTR TCA 90 bp | GTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCACTTAAGCCCTCTCGTCCGTCTGGCAGCTTaGTGGTCAGGTCAGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VPVTVGHWLTLCGHLSPLVRLAA*WSGQPG Trigger: ACCAGGCTGACCTGACCATCAAGCTGCCAGACGGAC...GAGAGGGCTTAAGTGACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CCA 90 bp | GGATTATGGGGAGCAGAGGCAGCTGCCTTTATTGAGGGCTACAGGCTGGCTGGCTCAGCACAAAGCTCTTaGCGTCCGAGGCCACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLWGAEAAAFIEGYRLAGSAQSS*RPRPPL Trigger: GAGAGGTGGCCTCGGACGCCAAGAGCTTTGTGCTGA...GCCAGCCAGCCTGTAGCCCTCAATAAAGGCAGCTGCCTCTGCTCCCCATAATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR TCA 90 bp | GCTGTTCATCCATCCACCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGGGCGGTTGGGGAACTTaGATTCATGTCCGTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: AVHPSTSHCSVPVTVGHWGGWGT*IHVRLA Trigger: TGCCAGACGGACATGAATTCAAGTTCCCCAACCGCC...CCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGGTGGATGGATGAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CCA 90 bp | CACCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTGGTGTTACACACAATaGTGTTGGCGTCTCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: HLPLLCPCHSGTLAHPLWWCYTQ*CWRLHG Trigger: CCCATGGAGACGCCAACACCATTGTGTGTAACACCA...CCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CCA 90 bp | TCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCACATGGTCAGGTCAGCCTaGTCAAAGGTGATGCACACC | + |
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Preference number: 4 (lower is better) Translates to: SHCSVPVTVGHWLTLCGHMVRSA*SKVMHT Trigger: GGTGTGCATCACCTTTGACCAGGCTGACCTGACCAT...GTGACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR TCA 90 bp | GTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCACTTAAGCCCTCTCGACATTCCCCAGGTTTaGGATTCAGGTTGCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: VPVTVGHWLTLCGHLSPLDIPQV*DSGCWR Trigger: TCGCCAGCAACCTGAATCTCAAACCTGGGGAATGTC...GAGAGGGCTTAAGTGACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR CAA 72 bp | GGTTCCCGGTGTTCGGTTCCCCAGGTCCCATCTTCCTaGGTGTTACACACAATGGTGTTGGCGTCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: GSRCSVPQVPSS*VLHTMVLASPW Trigger: CCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGAAGATGGGACCTGGGGAACCGAACACCGGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| CDS-3UTR CCA 90 bp | TGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCACTTAAGCCCTCTGTGTTGGCGTCTCCATaGGCATTGAAGCGAGGATTG | + |
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Preference number: 4 (lower is better) Translates to: CPCHSGTLAHPLWSLKPSVLASP*ALKRGL Trigger: CAATCCTCGCTTCAATGCCCATGGAGACGCCAACAC...AGAGGGCTTAAGTGACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR TCA 90 bp | CCCAGGTCCCATCTTCCTTGGTGTTACACACAATGGTGTTGGCGTCTCCATGGGGACATTCCCCAGGTTTaGGATTCAGGTTGCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PRSHLPWCYTQWCWRLHGDIPQV*DSGCWR Trigger: TCGCCAGCAACCTGAATCTCAAACCTGGGGAATGTC...CCCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGAAGATGGGACCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| CDS-3UTR GCA 90 bp | AATGCGGTCCGGCTGTTCATCCATCCACCTCCCACTGCTCTGTCCCTGTCACAGGTAGGCACAGGTTGTTaGTGTCTTTTCCCAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: NAVRLFIHPPPTALSLSQVGTGC*CLFPGS Trigger: TGAACCTGGGAAAAGACAGCAACAACCTGTGCCTAC...CTGTGACAGGGACAGAGCAGTGGGAGGTGGATGGATGAACAGCCGGACCGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR CAA 72 bp | TGTGGTCACTTAAGCCCTCTCTGTGCTGGGCTCTCTTaGGCCTGGAAAGCACAAGAGAGGTCACTGAGACCA | + |
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Preference number: 4 (lower is better) Translates to: CGHLSPLCAGLS*AWKAQERSLRP Trigger: TGGTCTCAGTGACCTCTCTTGTGCTTTCCAGGCCAAAGAGAGCCCAGCACAGAGAGGGCTTAAGTGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| 3UTR CAA 72 bp | CGGTTGGGGAACTTGAATTCATGTCCGTCTGGCAGCTaGATGGTCAGGTCAGCCTGGTCAAAGGTGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: RLGNLNSCPSGS*MVRSAWSKVMH Trigger: GTGCATCACCTTTGACCAGGCTGACCTGACCATCAAGCTGCCAGACGGACATGAATTCAAGTTCCCCAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 72 bp | ATGGTGTTGGCGTCTCCATGGGCATTGAAGCGAGGATaGAAGTGTAGGCACAGGTTGTTGCTGTCTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: MVLASPWALKRG*KCRHRLLLSFP Trigger: GGGAAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGCCAACACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 72 bp | CAGGTCCCATCTTCCTTGGTGTTACACACAATGGTGTaGGCGTCTCCATGGGCATTGAAGCGAGGATTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QVPSSLVLHTMV*ASPWALKRGLK Trigger: CTTCAATCCTCGCTTCAATGCCCATGGAGACGCCAACACCATTGTGTGTAACACCAAGGAAGATGGGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 72 bp | GTGTTACACACAATGGTGTTGGCGTCTCCATGGGCATaGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: VLHTMVLASPWA*KRGLKCRHRLL Trigger: CAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGCCAACACCATTGTGTGTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| 3UTR CAA 72 bp | GCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTaGCTGTCTTTTCCCAGGTTCAGCACAAAGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: ALKRGLKCRHRL*LSFPRFSTKFL Trigger: TAGAAACTTTGTGCTGAACCTGGGAAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| CDS-3UTR CAA 90 bp | CCACCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGGTTTGAGATTCAGGTaGCTGGCGACCAGACCACAG | + |
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Preference number: 5 (lower is better) Translates to: PPPTALSLSQWDTGSPSVGLRFR*LATRPQ Trigger: CTGTGGTCTGGTCGCCAGCAACCTGAATCTCAAACC...CACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | CACCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGAGGCGGTTGGGGAACTaGAATTCATGTCCGTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: HLPLLCPCHSGTLAHPLWRRLGN*NSCPSG Trigger: GCCAGACGGACATGAATTCAAGTTCCCCAACCGCCT...CCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | CCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCTTGATGGCCTCCATGTaGAGGCGGTTGGGGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: PPTALSLSQWDTGSPSVVLMASM*RRLGNL Trigger: CAAGTTCCCCAACCGCCTCAACATGGAGGCCATCAA...GACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | CCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCACCTCTCCCCGAACTTaGAGACATTCCCCAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: PPTALSLSQWDTGSPSVVTSPRT*RHSPGL Trigger: CAAACCTGGGGAATGTCTCAAAGTTCGGGGAGAGGT...GACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | TGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCACTTAAGCCCTCTTTCAGCACAAAGCTCTaGGCGTCCGAGGCCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: CPCHSGTLAHPLWSLKPSFSTKL*ASEATS Trigger: AGAGGTGGCCTCGGACGCCAAGAGCTTTGTGCTGAA...AGAGGGCTTAAGTGACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | AATCTTGAAGTCTCCATCCGCCGCCATGTAGTTGATGGCCTCCATGTTGAGGCGAGGAGACCCTGTCTCTaGGCGTCCGAGGCCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: NLEVSIRRHVVDGLHVEARRPCL*ASEATS Trigger: AGAGGTGGCCTCGGACGCCAAGAGACAGGGTCTCCT...CGCCTCAACATGGAGGCCATCAACTACATGGCGGCGGATGGAGACTTCAAGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| CDS-3UTR CAA 90 bp | GCTGTTCATCCATCCACCTCCCACTGCTCTGTCCCTGTCACAGTGGGACACTGGAGACATTCCCCAGGTTaGAGATTCAGGTTGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: AVHPSTSHCSVPVTVGHWRHSPG*RFRLLA Trigger: CGCCAGCAACCTGAATCTCAAACCTGGGGAATGTCT...CCAGTGTCCCACTGTGACAGGGACAGAGCAGTGGGAGGTGGATGGATGAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | GGTCCGGCTGTTCATCCATCCACCTCCCACTGCTCTGTCCCTGTCACAGTGGGAAAGTGTAGGCACAGGTaGTTGCTGTCTTTTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GPAVHPSTSHCSVPVTVGKCRHR*LLSFPR Trigger: CCTGGGAAAAGACAGCAACAACCTGTGCCTACACTT...TCCCACTGTGACAGGGACAGAGCAGTGGGAGGTGGATGGATGAACAGCCGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | AATGCGGTCCGGCTGTTCATCCATCCACCTCCCACTGCTCTGTCCCTGTCACAGGCGTCTCCATGGGCATaGAAGCGAGGATTGAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: NAVRLFIHPPPTALSLSQASPWA*KRGLKC Trigger: ACACTTCAATCCTCGCTTCAATGCCCATGGAGACGC...CTGTGACAGGGACAGAGCAGTGGGAGGTGGATGGATGAACAGCCGGACCGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | AATGCGGTCCGGCTGTTCATCCATCCACCTCCCACTGCTCTGTCCCTGTCACAGTGTAGGCACAGGTTGTaGCTGTCTTTTCCCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: NAVRLFIHPPPTALSLSQCRHRL*LSFPRF Trigger: GAACCTGGGAAAAGACAGCAACAACCTGTGCCTACA...CTGTGACAGGGACAGAGCAGTGGGAGGTGGATGGATGAACAGCCGGACCGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | TGTCCCTGTCACAGTGGGACACTGGCTCACCCTCTGTGGTCACTTAAGCCCTCTTCCATGTTGAGGCGGTaGGGGAACTTGAATTCATGT | + |
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Preference number: 5 (lower is better) Translates to: CPCHSGTLAHPLWSLKPSSMLRR*GNLNSC Trigger: ACATGAATTCAAGTTCCCCAACCGCCTCAACATGGA...AGAGGGCTTAAGTGACCACAGAGGGTGAGCCAGTGTCCCACTGTGACAGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS-3UTR CAA 90 bp | CTACAGGCTGGCTGGCTTCACTCAAAGGCCACGCACTTAATCTTGAAGTCTCCAAGACATTCCCCAGGTTaGAGATTCAGGTTGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: LQAGWLHSKATHLILKSPRHSPG*RFRLLA Trigger: CGCCAGCAACCTGAATCTCAAACCTGGGGAATGTCT...TGGAGACTTCAAGATTAAGTGCGTGGCCTTTGAGTGAAGCCAGCCAGCCTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| CDS-3UTR CAA 90 bp | CCATGGGCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTTGCTGTCTTTTGGTTTGAGATTCAGGTaGCTGGCGACCAGACCACAG | + |
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Preference number: 5 (lower is better) Translates to: PWALKRGLKCRHRLLLSFGLRFR*LATRPQ Trigger: CTGTGGTCTGGTCGCCAGCAACCTGAATCTCAAACC...AAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229159.2 |
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| CDS-3UTR CAA 90 bp | TCACATAGACACACACAAACACTCTCCCATGAAAGGGCTGGATTATGGGGAGCAGCATTGAAGCGAGGATaGAAGTGTAGGCACAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SHRHTQTLSHERAGLWGAALKRG*KCRHRL Trigger: CAACCTGTGCCTACACTTCAATCCTCGCTTCAATGC...TGCTCCCCATAATCCAGCCCTTTCATGGGAGAGTGTTTGTGTGTGTCTATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS CAA 72 bp | GCCACCTCTCCCCGAACTTTGAGACATTCCCCAGGTTaGAGATTCAGGTTGCTGGCGACCAGACCACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: ATSPRTLRHSPG*RFRLLATRPQA Trigger: GGCCTGTGGTCTGGTCGCCAGCAACCTGAATCTCAAACCTGGGGAATGTCTCAAAGTTCGGGGAGAGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089377.6 ENSMUST00000229159.2 |
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| CDS CAA 90 bp | GCGTCTCCATGGGCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTaGTTGCTGTCTTTTCCCAGGTTCAGCACAAAGCTCTTGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: ASPWALKRGLKCRHR*LLSFPRFSTKLLAS Trigger: GGACGCCAAGAGCTTTGTGCTGAACCTGGGAAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS CAA 90 bp | TCTCCATGGGCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTaGCTGTCTTTTCCCAGGTTCAGCACAAAGCTCTTGGCGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SPWALKRGLKCRHRL*LSFPRFSTKLLASE Trigger: CTCGGACGCCAAGAGCTTTGTGCTGAACCTGGGAAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGCCCATGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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| CDS CAA 72 bp | GCATTGAAGCGAGGATTGAAGTGTAGGCACAGGTTGTaGCTGTCTTTTCCCAGGTTCAGCACAAAGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ALKRGLKCRHRL*LSFPRFSTKLL Trigger: CAAGAGCTTTGTGCTGAACCTGGGAAAAGACAGCAACAACCTGTGCCTACACTTCAATCCTCGCTTCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089377.6 |
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