Pregenerated sensors for LEXM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054362Ensembl transcript IDs: ENSMUST00000067387.9, ENSMUST00000106788.2, ENSMUST00000126324.7, ENSMUST00000189032.7
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCCTCCTGCCTTCTCCCCTCACCCAGGCATTCTCCAAGATCCCTaGTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: DPPAFSPHPGILQDP*FLSHLKISLLALGS Trigger: AGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGAGGGGAGAAGGCAGGAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| 3UTR CCA 90 bp | TTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTTCTaGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: FSKIPASFPISRFLF*PWALWLHQAVLPEW Trigger: CCACTCGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| 3UTR TCA 90 bp | TCTTCCATCCACCTGCTCTCTGGCTCCCAAATTCACGTCACCAGCTaGCTGGAATGCTTAGGACAATGGATCTCTTGTAACAAAAGATAC | + |
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Preference number: 1 (lower is better) Translates to: SSIHLLSGSQIHVTS*LECLGQWISCNKRY Trigger: GTATCTTTTGTTACAAGAGATCCATTGTCCTAAGCATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTGGATGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCCCTGCTGTCCCAGTAGACACTGTGACTTTTGACCGCAGGGCTACAGCACTTGGGCTCTCTGGTTaGATCAGGCTGTTCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: GPPAVPVDTVTFDRRATALGLSG*IRLFFP Trigger: CGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAG...TGCTGTAGCCCTGCGGTCAAAAGTCACAGTGTCTACTGGGACAGCAGGGGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCCTTGGGCTCTCTGGTTaGATCAGGCTGTTCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: VAESVRSPHPLLQGTTGSLGLSG*IRLFFP Trigger: CGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAG...GGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCTGGCCTTGGGCTCTCTaGTTGCATCAGGCTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VAESVRSPHPLLQGTTGSWPWAL*LHQAVL Trigger: AAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCA...GGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| 3UTR-3UTR GCA 90 bp | TCACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTCTTGGGCTCTCTGGTTaGATCAGGCTGTTCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: SPRHSPRSLLPFPSQDFSLGLSG*IRLFFP Trigger: CGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAG...AGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTTCTGTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACATCAAGATTTCTCTTCTaGCCTTGGGCTCTCTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: VSSVAESVRSPHPLLQGTSRFLF*PWALWL Trigger: CAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGA...TGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGAACTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| 3UTR-3UTR CCA 90 bp | CATCCACCTGCTCTCTGGCTCCCAAATTCACGTCACCAGCTGACTGGAATGCTTTCAAGATTTCTCTTCTaGCCTTGGGCTCTCTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: HPPALWLPNSRHQLTGMLSRFLF*PWALWL Trigger: CAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGA...AAGCATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
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| 3UTR GCA 72 bp | CCAGGAAGTCACCCACGACCCCCTCTTCCATCCACCTaGTCTCTGGCTCCCAAATTCACGTCACCAGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: PGSHPRPPLPST*SLAPKFTSPAD Trigger: GTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTGGATGGAAGAGGGGGTCGTGGGTGACTTCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
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| 3UTR TCA 72 bp | TGGTCCCCCTGCTGTCCCAGTAGACACTGTGACTTTTaGCCGCAGGGCTACAGCAAAGATGACCCTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: WSPCCPSRHCDF*PQGYSKDDPPA Trigger: GGCAGGAGGGTCATCTTTGCTGTAGCCCTGCGGTCAAAAGTCACAGTGTCTACTGGGACAGCAGGGGGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| 3UTR CCA 72 bp | GTCACCCACGACCCCCTCTTCCATCCACCTGCTCTCTaGCTCCCAAATTCACGTCACCAGCTGACTGGAATG | + |
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Preference number: 3 (lower is better) Translates to: VTHDPLFHPPAL*LPNSRHQLTGM Trigger: CATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTGGATGGAAGAGGGGGTCGTGGGTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
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| 3UTR-3UTR CAA 90 bp | GTAAGTTCTGTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACACCTTGGGCTCTCTGGTaGCATCAGGCTGTTCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: VSSVAESVRSPHPLLQGTPWALW*HQAVLP Trigger: GGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGG...TGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGAACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| 3UTR-3UTR CAA 90 bp | GGTCCCCCTGCTGTCCCAGTAGACACTGTGACTTTTGACCGCAGGGCTACAGCAATTTCTCTTCTGGCCTaGGGCTCTCTGGTTGCATCA | + |
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Preference number: 3 (lower is better) Translates to: GPPAVPVDTVTFDRRATAISLLA*GSLVAS Trigger: TGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAAT...TGCTGTAGCCCTGCGGTCAAAAGTCACAGTGTCTACTGGGACAGCAGGGGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| 3UTR CCA 72 bp | GCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTaGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGAG | + |
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Preference number: 3 (lower is better) Translates to: ASFPISRFLFWP*ALWLHQAVLPE Trigger: CTCGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| 3UTR-3UTR CAA 90 bp | CACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTTCCTTGGGCTCTCTGGTaGCATCAGGCTGTTCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: HPGILQDPCFLSHLKISLPWALW*HQAVLP Trigger: GGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGG...AAGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| 3UTR-3UTR CAA 90 bp | GTAAGTTCTGTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAATTTCTCTTCTGGCCTaGGGCTCTCTGGTTGCATCA | + |
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Preference number: 3 (lower is better) Translates to: VSSVAESVRSPHPLLQGTISLLA*GSLVAS Trigger: TGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAAT...TGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGAACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| 3UTR TCA 72 bp | CACCTGCTCTCTGGCTCCCAAATTCACGTCACCAGCTaGCTGGAATGCTTAGGACAATGGATCTCTTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: HLLSGSQIHVTS*LECLGQWISCN Trigger: GTTACAAGAGATCCATTGTCCTAAGCATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
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| 3UTR TCA 72 bp | ATGTCTGAAATCGCTTTATTATGTAAGTTCTGTGGCTaGGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: MSEIALLCKFCG*VCQVSSSSSPG Trigger: CCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGAACTTACATAATAAAGCGATTTCAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | GGTCCCCCTGCTGTCCCAGTAGACACTGTGACTTTTGACCGCAGGGCTACAGCAGTGTCTCCCCAGAGCTaGGCAGCCCCCGTTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GPPAVPVDTVTFDRRATAVSPQS*AAPVCS Trigger: AGAGCAAACGGGGGCTGCTCAGCTCTGGGGAGACAC...TGCTGTAGCCCTGCGGTCAAAAGTCACAGTGTCTACTGGGACAGCAGGGGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR GCA 90 bp | GCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCCCCTCAAACCTGTGGCTCTaGACCCCAAAGGGCGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: AESVRSPHPLLQGTTGSPSNLWL*TPKGAP Trigger: AGGGGCGCCCTTTGGGGTGCAGAGCCACAGGTTTGA...GGGGGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | ACCACTGGTCCCCCTGCTGTCCCAGTAGACACTGTGACTTTTGACCGCAGGGCTAGCCGAGTGGCTTCGTaGGCCTGGGACCATCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TTGPPAVPVDTVTFDRRASRVAS*AWDHPE Trigger: CTCAGGATGGTCCCAGGCCCACGAAGCCACTCGGCT...AGCCCTGCGGTCAAAAGTCACAGTGTCTACTGGGACAGCAGGGGGACCAGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | GGTCCCCCTGCTGTCCCAGTAGACACTGTGACTTTTGACCGCAGGGCTACAGCATGGAAGTGGGGTAGCTaGGTCAGCCGAGTGGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: GPPAVPVDTVTFDRRATAWKWGS*VSRVAS Trigger: CGAAGCCACTCGGCTGACCCAGCTACCCCACTTCCA...TGCTGTAGCCCTGCGGTCAAAAGTCACAGTGTCTACTGGGACAGCAGGGGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | CCACCTGCTCTCTGGCTCCCAAATTCACGTCACCAGCTGACTGGAATGCTTAGGGGCCTGGGACCATCCTaGGCCCAACTTCTGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PPALWLPNSRHQLTGMLRGLGPS*AQLLFQ Trigger: CTGGAACAGAAGTTGGGCTCAGGATGGTCCCAGGCC...CCTAAGCATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
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| CDS-3UTR TCA 90 bp | TCTGTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCCCATCAGCGTGGTGTTaGGATAGCGGCCTACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SVAESVRSPHPLLQGTTGPSAWC*DSGLRQ Trigger: TTGGCGTAGGCCGCTATCTCAACACCACGCTGATGG...GCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | CCCCTCACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTGTGTCTCCCCAGAGCTaGGCAGCCCCCGTTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PLTQAFSKIPASFPISRFVSPQS*AAPVCS Trigger: AGAGCAAACGGGGGCTGCTCAGCTCTGGGGAGACAC...AAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR GCA 90 bp | GCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCCCCCCACGCTTGTGCACCTaGTGCTCTTTTTCCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AESVRSPHPLLQGTTGSPPRLCT*CSFSFL Trigger: CAAGAAGGAAAAAGAGCAGCAGGTGCACAAGCGTGG...GGGGGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | CCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTAGCCGAGTGGCTTCGTaGGCCTGGGACCATCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PISRFLFWPWALWLHQAVSRVAS*AWDHPE Trigger: CTCAGGATGGTCCCAGGCCCACGAAGCCACTCGGCT...AACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | GATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGAGTTGGAAGTGGGGTAGCTaGGTCAGCCGAGTGGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: DFSSGLGLSGCIRLFFPSWKWGS*VSRVAS Trigger: CGAAGCCACTCGGCTGACCCAGCTACCCCACTTCCA...ACTCGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | GCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATGTGTCTCCCCAGAGCTaGGCAGCCCCCGTTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASFPISRFLFWPWALWLHVSPQS*AAPVCS Trigger: AGAGCAAACGGGGGCTGCTCAGCTCTGGGGAGACAC...ATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | ACCACTGGTCCCCCTGCTGTCCCAGTAGACACTGTGACTTTTGACCGCAGGGCTATGATGTCTGGAGTATaGGGCCTCTGTGAAGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TTGPPAVPVDTVTFDRRAMMSGV*GLCEGA Trigger: AGCACCTTCACAGAGGCCCCATACTCCAGACATCAT...AGCCCTGCGGTCAAAAGTCACAGTGTCTACTGGGACAGCAGGGGGACCAGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | GCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATGGCCTGGGACCATCCTaGGCCCAACTTCTGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ASFPISRFLFWPWALWLHGLGPS*AQLLFQ Trigger: CTGGAACAGAAGTTGGGCTCAGGATGGTCCCAGGCC...ATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | CCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCCCATCAGCGTGGTGTTaGGATAGCGGCCTACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PSQDFSSGLGLSGCIRLFPSAWC*DSGLRQ Trigger: TTGGCGTAGGCCGCTATCTCAACACCACGCTGATGG...GAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR GCA 90 bp | GGTCCCCCTGCTGTCCCAGTAGACACTGTGACTTTTGACCGCAGGGCTACAGCACGCTTGTGCACCTGCTaGTCTTTTTCCTTCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: GPPAVPVDTVTFDRRATARLCTC*SFSFLM Trigger: CATCAAGAAGGAAAAAGAGCAGCAGGTGCACAAGCG...TGCTGTAGCCCTGCGGTCAAAAGTCACAGTGTCTACTGGGACAGCAGGGGGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | CATCCACCTGCTCTCTGGCTCCCAAATTCACGTCACCAGCTGACTGGAATGCTTGAGACATCAAACCTGTaGCTCTGCACCCCAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HPPALWLPNSRHQLTGMLETSNL*LCTPKG Trigger: GCCCTTTGGGGTGCAGAGCCACAGGTTTGATGTCTC...AAGCATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
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| CDS-3UTR CCA 90 bp | CACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTTAGCCGAGTGGCTTCGTaGGCCTGGGACCATCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HPGILQDPCFLSHLKISLSRVAS*AWDHPE Trigger: CTCAGGATGGTCCCAGGCCCACGAAGCCACTCGGCT...AAGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | TCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGTGGAAGTGGGGTAGCTaGGTCAGCCGAGTGGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SFPISRFLFWPWALWLHQWKWGS*VSRVAS Trigger: CGAAGCCACTCGGCTGACCCAGCTACCCCACTTCCA...CTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | ACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTTCGGCCTGGGACCATCCTaGGCCCAACTTCTGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TQAFSKIPASFPISRFLFGLGPS*AQLLFQ Trigger: CTGGAACAGAAGTTGGGCTCAGGATGGTCCCAGGCC...GAAGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | GCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCCATCAGCGTGGTGTTaGGATAGCGGCCTACGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ASFPISRFLFWPWALWLHPSAWC*DSGLRQ Trigger: TTGGCGTAGGCCGCTATCTCAACACCACGCTGATGG...ATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR GCA 90 bp | TCACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTTCAAACCTGTGGCTCTaGACCCCAAAGGGCGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SPRHSPRSLLPFPSQDFSSNLWL*TPKGAP Trigger: AGGGGCGCCCTTTGGGGTGCAGAGCCACAGGTTTGA...AGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR GCA 90 bp | GCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCCCCCTCTGTGGTTTCTTCTaGAGCTCAGTTATGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: AESVRSPHPLLQGTTGSPLCGFF*SSVMKS Trigger: AGACTTCATAACTGAGCTGCAGAAGAAACCACAGAG...GGGGGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | CCCCTCACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTGAGACATCAAACCTGTaGCTCTGCACCCCAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PLTQAFSKIPASFPISRFETSNL*LCTPKG Trigger: GCCCTTTGGGGTGCAGAGCCACAGGTTTGATGTCTC...AAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR CCA 90 bp | CAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGCCCCCGTTTGCTCTGTaGTTTCTTCTGCAGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QDFSSGLGLSGCIRLFFPPPFAL*FLLQLS Trigger: ACTGAGCTGCAGAAGAAACCACAGAGCAAACGGGGG...CGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | TGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCCTTAAGGAGTAGGATCTaGATTGTAGTCCACAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLSLSGLLILFSRGQLAPLRSRI*IVVHSW Trigger: CCAACTGTGGACTACAATTCAGATCCTACTCCTTAA...GGGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
||
| CDS-3UTR CCA 90 bp | CTCACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCGAGACATCAAACCTGTaGCTCTGCACCCCAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTQAFSKIPASFPISRFLETSNL*LCTPKG Trigger: GCCCTTTGGGGTGCAGAGCCACAGGTTTGATGTCTC...GAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTCACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCCCCCGTTTGCTCTGTaGTTTCTTCTGCAGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLTQAFSKIPASFPISRFPPFAL*FLLQLS Trigger: ACTGAGCTGCAGAAGAAACCACAGAGCAAACGGGGG...AAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGAGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CCA 90 bp | TGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCCAATCTGTCAGTTCCTTaGGCTTCATTTTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WLSLSGLLILFSRGQLAPNLSVP*ASFSAQ Trigger: CTGTGCAGAAAATGAAGCCCAAGGAACTGACAGATT...GGGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCATATTTTTGGGGCACTaGCTAAGGGTTGTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVAESVRSPHPLLQGTTGIFLGH*LRVVQK Trigger: TTTCTGGACAACCCTTAGTCAGTGCCCCAAAAATAT...GCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
||
| CDS-3UTR GCA 90 bp | CCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCCCACGCTTGTGCACCTaGTGCTCTTTTTCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSQDFSSGLGLSGCIRLFPRLCT*CSFSFL Trigger: CAAGAAGGAAAAAGAGCAGCAGGTGCACAAGCGTGG...GAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR GCA 90 bp | TCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCCCACGCTTGTGCACCTaGTGCTCTTTTTCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRFLFWPWALWLHQAVLPPRLCT*CSFSFL Trigger: CAAGAAGGAAAAAGAGCAGCAGGTGCACAAGCGTGG...GGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCCTCTGTGGTTTCTTCTaGAGCTCAGTTATGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVAESVRSPHPLLQGTTGLCGFF*SSVMKS Trigger: AGACTTCATAACTGAGCTGCAGAAGAAACCACAGAG...GCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
||
| 3UTR CAA 72 bp | TGCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTaGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CFLSHLKISLLA*GSLVASGCSSR Trigger: TCGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000126324.7 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | CCATCCACCTGCTCTCTGGCTCCCAAATTCACGTCACCAGCTGACTGGAATGCTTTAAGGAGTAGGATCTaGATTGTAGTCCACAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTCSLAPKFTSPADWNALRSRI*IVVHSW Trigger: CCAACTGTGGACTACAATTCAGATCCTACTCCTTAA...AGCATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTGGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCCGCTTGTGCACCTGCTaGTCTTTTTCCTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRFLFWPWALWLHQAVLPRLCTC*SFSFLM Trigger: CATCAAGAAGGAAAAAGAGCAGCAGGTGCACAAGCG...GGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGATGATGTCTGGAGTATaGGGCCTCTGTGAAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFPISRFLFWPWALWLHQMMSGV*GLCEGA Trigger: AGCACCTTCACAGAGGCCCCATACTCCAGACATCAT...CTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CCA 90 bp | AATGGATCTCTTGTAACAAAAGATACCTGGTCCCCCTGCTGTCCCAGTAGACACCCCCCGTTTGCTCTGTaGTTTCTTCTGCAGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NGSLVTKDTWSPCCPSRHPPFAL*FLLQLS Trigger: ACTGAGCTGCAGAAGAAACCACAGAGCAAACGGGGG...GTGTCTACTGGGACAGCAGGGGGACCAGGTATCTTTTGTTACAAGAGATCCATT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
||
| CDS-3UTR TCA 90 bp | GATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGAGTTTAAGGAGTAGGATCTaGATTGTAGTCCACAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFSSGLGLSGCIRLFFPSLRSRI*IVVHSW Trigger: CCAACTGTGGACTACAATTCAGATCCTACTCCTTAA...ACTCGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000126324.7 ENSMUST00000189032.7 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGCGCTTGTGCACCTGCTaGTCTTTTTCCTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFPISRFLFWPWALWLHQRLCTC*SFSFLM Trigger: CATCAAGAAGGAAAAAGAGCAGCAGGTGCACAAGCG...CTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | CACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTTGCTCTTTTTCCTTCTTaGTGGCCTGGTAGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPGILQDPCFLSHLKISLALFPS*WPGSGS Trigger: ACTTCCACTACCAGGCCATCAAGAAGGAAAAAGAGC...AAGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | TCACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTGCTCTTTTTCCTTCTTaGTGGCCTGGTAGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPRHSPRSLLPFPSQDFSALFPS*WPGSGS Trigger: ACTTCCACTACCAGGCCATCAAGAAGGAAAAAGAGC...AGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | CCACCTGCTCTCTGGCTCCCAAATTCACGTCACCAGCTGACTGGAATGCTTAGGTTTCTTCTTGTGTTGTaGGTTCATTTCGTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPALWLPNSRHQLTGMLRFLLVL*VHFVQK Trigger: TTTCTGGACGAAATGAACTCACAACACAAGAAGAAA...CCTAAGCATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCAGAGAGCAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCCTCTGTGGTTTCTTCTaGAGCTCAGTTATGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSQDFSSGLGLSGCIRLFLCGFF*SSVMKS Trigger: AGACTTCATAACTGAGCTGCAGAAGAAACCACAGAG...GAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTAATCTGTCAGTTCCTTaGGCTTCATTTTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PISRFLFWPWALWLHQAVNLSVP*ASFSAQ Trigger: CTGTGCAGAAAATGAAGCCCAAGGAACTGACAGATT...AACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGATATTTTTGGGGCACTaGCTAAGGGTTGTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPISRFLFWPWALWLHQIFLGH*LRVVQK Trigger: TTTCTGGACAACCCTTAGTCAGTGCCCCAAAAATAT...CTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | GCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATTTAAGGAGTAGGATCTaGATTGTAGTCCACAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFPISRFLFWPWALWLHLRSRI*IVVHSW Trigger: CCAACTGTGGACTACAATTCAGATCCTACTCCTTAA...ATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000126324.7 ENSMUST00000189032.7 |
||
| CDS-3UTR CCA 90 bp | TTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTAATCTGTCAGTTCCTTaGGCTTCATTTTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPISRFLFWPWALWLHQANLSVP*ASFSAQ Trigger: CTGTGCAGAAAATGAAGCCCAAGGAACTGACAGATT...AGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR TCA 90 bp | CACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCTCTTATATTTTTGGGGCACTaGCTAAGGGTTGTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HPGILQDPCFLSHLKISLIFLGH*LRVVQK Trigger: TTTCTGGACAACCCTTAGTCAGTGCCCCAAAAATAT...AAGAGAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATTTTCTTCTTGTGTTGTaGGTTCATTTCGTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASFPISRFLFWPWALWLHFLLVL*VHFVQK Trigger: TTTCTGGACGAAATGAACTCACAACACAAGAAGAAA...ATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR TCA 90 bp | TTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTTTTCTTCTTGTGTTGTaGGTTCATTTCGTCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPISRFLFWPWALWLHQAFLLVL*VHFVQK Trigger: TTTCTGGACGAAATGAACTCACAACACAAGAAGAAA...AGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS TCA 90 bp | AGGAGCCAGGGCCACGCTTGTGCACCTGCTGCTCTTTTTCCTTCTTaGTGGCCTGGTAGTGGAAGTGGGGTAGCTGGGTCAGCCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSQGHACAPAALFPS*WPGSGSGVAGSAEW Trigger: CCACTCGGCTGACCCAGCTACCCCACTTCCACTACCAGGCCATCAAGAAGGAAAAAGAGCAGCAGGTGCACAAGCGTGGCCCTGGCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS TCA 90 bp | CCTTTAGGCCGCACCGTTTGGAGGCCAGGAGGAACGGTGGCCGGTTaGCATGTTTCTGTTCCGTCTCATGAGGAAGCCAAGAACCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLGRTVWRPGGTVAG*HVSVPSHEEAKNQG Trigger: GCCCTGGTTCTTGGCTTCCTCATGAGACGGAACAGAAACATGTCAACCGGCCACCGTTCCTCCTGGCCTCCAAACGGTGCGGCCTAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | TTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGAGTGGCGAGCCAGGGCCACGCTaGTGCACCTGCTGCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSSGLGLSGCIRLFFPSGEPGPR*CTCCSF Trigger: AAAAGAGCAGCAGGTGCACAAGCGTGGCCCTGGCTC...GCCACTCGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCGAGCCAGGGCCACGCTaGTGCACCTGCTGCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVAESVRSPHPLLQGTTGEPGPR*CTCCSF Trigger: AAAAGAGCAGCAGGTGCACAAGCGTGGCCCTGGCTC...GCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067387.9 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | GCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCCCCAATTGTAGTCCACAGTaGGACGGCACTTGCCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: AESVRSPHPLLQGTTGSPNCSPQ*DGTCPS Trigger: CGAAGGGCAAGTGCCGTCCAACTGTGGACTACAATT...GGGGGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| CDS TCA 90 bp | CAAGGGTGGCTTGTTAGACACTCTACACATCAGGCCGTCAGAATGTaGGCGGTTCCAGGCCTTCTCCTCCAGCTGTGTGTACGGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGWLVRHSTHQAVRM*AVPGLLLQLCVRVP Trigger: GGGAACCCGTACACACAGCTGGAGGAGAAGGCCTGGAACCGCTCACATTCTGACGGCCTGATGTGTAGAGTGTCTAACAAGCCACCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | CCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCGAGCCAGGGCCACGCTaGTGCACCTGCTGCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSQDFSSGLGLSGCIRLFEPGPR*CTCCSF Trigger: AAAAGAGCAGCAGGTGCACAAGCGTGGCCCTGGCTC...GAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | ATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGAGTGCTGAGCAGCCCCCGTTaGCTCTGTGGTTTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISLLALGSLVASGCSSRVLSSPR*LCGFFC Trigger: GCAGAAGAAACCACAGAGCAAACGGGGGCTGCTCAG...CACTCGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | TGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCCCTCTTGCAGGTATCGCTaGGGCTCACTCATGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLSLSGLLILFSRGQLAPSCRYR*GSLMYR Trigger: TCTGTACATGAGTGAGCCCAAGCGATACCTGCAAGA...GGGAGCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCACCCACGACCCCCTCTTCCATCCACCTGCTCTCTGGCTCCCAAATTAATTGTAGTCCACAGTaGGACGGCACTTGCCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RKSPTTPSSIHLLSGSQINCSPQ*DGTCPS Trigger: CGAAGGGCAAGTGCCGTCCAACTGTGGACTACAATT...AATTTGGGAGCCAGAGAGCAGGTGGATGGAAGAGGGGGTCGTGGGTGACTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCCTGAGCAGCCCCCGTTaGCTCTGTGGTTTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRFLFWPWALWLHQAVLPLSSPR*LCGFFC Trigger: GCAGAAGAAACCACAGAGCAAACGGGGGCTGCTCAG...GGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | TCTGTGGCTGAGTCTGTCAGGTCTCCTCATCCTCTTCTCCAGGGGACAACTGGCTCTTGCAGGTATCGCTaGGGCTCACTCATGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVAESVRSPHPLLQGTTGSCRYR*GSLMYR Trigger: TCTGTACATGAGTGAGCCCAAGCGATACCTGCAAGA...GCCAGTTGTCCCCTGGAGAAGAGGATGAGGAGACCTGACAGACTCAGCCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000126324.7 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCACCCACGACCCCCTCTTCCATCCACCTGCTCTCTGGCTCCCAAATTTCTTGCAGGTATCGCTaGGGCTCACTCATGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKSPTTPSSIHLLSGSQISCRYR*GSLMYR Trigger: TCTGTACATGAGTGAGCCCAAGCGATACCTGCAAGA...AATTTGGGAGCCAGAGAGCAGGTGGATGGAAGAGGGGGTCGTGGGTGACTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
||
| CDS-3UTR CAA 90 bp | GATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATCAGGCTGTTCTTCCCGAGTAATTGTAGTCCACAGTaGGACGGCACTTGCCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DFSSGLGLSGCIRLFFPSNCSPQ*DGTCPS Trigger: CGAAGGGCAAGTGCCGTCCAACTGTGGACTACAATT...ACTCGGGAAGAACAGCCTGATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000126324.7 ENSMUST00000189032.7 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTGCATAATTGTAGTCCACAGTaGGACGGCACTTGCCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASFPISRFLFWPWALWLHNCSPQ*DGTCPS Trigger: CGAAGGGCAAGTGCCGTCCAACTGTGGACTACAATT...ATGCAACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| CDS GCA 90 bp | ATAGGTGTAATCCGTTTCTGCATGAGTCTGTCTCGGGTTAGGTCTTaGAGGTATCGCTTGGGCTCACTCATGTACAGAGAACGGTATCGC | + |
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Preference number: 5 (lower is better) Translates to: IGVIRFCMSLSRVRS*RYRLGSLMYRERYR Trigger: GCGATACCGTTCTCTGTACATGAGTGAGCCCAAGCGATACCTGCAAGACCTAACCCGAGACAGACTCATGCAGAAACGGATTACACCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000126324.7 ENSMUST00000189032.7 |
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| CDS TCA 90 bp | CACGATTACCAGTGGACTTTTTCACAAAGGTCTCAAGATCGCTTTTaGTGGTGTAGGTACCAGGTCCCAGGCCACTGCCCTGATGAAACA | + |
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Preference number: 5 (lower is better) Translates to: HDYQWTFSQRSQDRF*WCRYQVPGHCPDET Trigger: TGTTTCATCAGGGCAGTGGCCTGGGACCTGGTACCTACACCATCAAAAGCGATCTTGAGACCTTTGTGAAAAAGTCCACTGGTAATCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR CAA 90 bp | CCCTCACCCAGGCATTCTCCAAGATCCCTGCTTCCTTTCCCATCTCAAGATTTCACCCCTTGTTTCTTCTaGTGTTGTGAGTTCATTTCG | + |
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Preference number: 5 (lower is better) Translates to: PSPRHSPRSLLPFPSQDFTPCFF*CCEFIS Trigger: CGAAATGAACTCACAACACAAGAAGAAACAAGGGGT...GAAATCTTGAGATGGGAAAGGAAGCAGGGATCTTGGAGAATGCCTGGGTGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR CAA 90 bp | CCCTGCTTCCTTTCCCATCTCAAGATTTCTCTTCTGGCCTTGGGCTCTCTGGTTACCCCTTGTTTCTTCTaGTGTTGTGAGTTCATTTCG | + |
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Preference number: 5 (lower is better) Translates to: PCFLSHLKISLLALGSLVTPCFF*CCEFIS Trigger: CGAAATGAACTCACAACACAAGAAGAAACAAGGGGT...AACCAGAGAGCCCAAGGCCAGAAGAGAAATCTTGAGATGGGAAAGGAAGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS-3UTR CAA 90 bp | TGGCTCCCAAATTCACGTCACCAGCTGACTGGAATGCTTAGGACAATGGATCTCACCCCTTGTTTCTTCTaGTGTTGTGAGTTCATTTCG | + |
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Preference number: 5 (lower is better) Translates to: WLPNSRHQLTGMLRTMDLTPCFF*CCEFIS Trigger: CGAAATGAACTCACAACACAAGAAGAAACAAGGGGT...GAGATCCATTGTCCTAAGCATTCCAGTCAGCTGGTGACGTGAATTTGGGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106788.2 |
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| CDS CCA 90 bp | GTGAGTTCATTTCGTCCAGAAAGCTCTTGTAATCTGTCAGTTCCTTaGGCTTCATTTTCTGCACAGAGTAATGTCCATAGGGCAAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VSSFRPESSCNLSVP*ASFSAQSNVHRAKD Trigger: GTCCTTTGCCCTATGGACATTACTCTGTGCAGAAAATGAAGCCCAAGGAACTGACAGATTACAAGAGCTTTCTGGACGAAATGAACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS CCA 72 bp | TGGGGTAGCTGGGTCAGCCGAGTGGCTTCGTGGGCCTaGGACCATCCTGAGCCCAACTTCTGTTCCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: WGSWVSRVASWA*DHPEPNFCSRN Trigger: GTTCCTGGAACAGAAGTTGGGCTCAGGATGGTCCCAGGCCCACGAAGCCACTCGGCTGACCCAGCTACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS CCA 72 bp | TGGAAGTGGGGTAGCTGGGTCAGCCGAGTGGCTTCGTaGGCCTGGGACCATCCTGAGCCCAACTTCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: WKWGSWVSRVAS*AWDHPEPNFCS Trigger: GGAACAGAAGTTGGGCTCAGGATGGTCCCAGGCCCACGAAGCCACTCGGCTGACCCAGCTACCCCACTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS TCA 72 bp | CGCACCGTTTGGAGGCCAGGAGGAACGGTGGCCGGTTaGCATGTTTCTGTTCCGTCTCATGAGGAAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RTVWRPGGTVAG*HVSVPSHEEAK Trigger: CTTGGCTTCCTCATGAGACGGAACAGAAACATGTCAACCGGCCACCGTTCCTCCTGGCCTCCAAACGGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS TCA 72 bp | GCTGCCTTCGGTCTATGGACTCCATCAGCGTGGTGTTaGGATAGCGGCCTACGCCAACTGGGTTCCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: AAFGLWTPSAWC*DSGLRQLGSRF Trigger: GAACCTGGAACCCAGTTGGCGTAGGCCGCTATCTCAACACCACGCTGATGGAGTCCATAGACCGAAGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS CCA 72 bp | ACCAGGTCCCAGGCCACTGCCCTGATGAAACAAGGGTaGCTTGTTAGACACTCTACACATCAGGCCGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TRSQATALMKQG*LVRHSTHQAVR Trigger: TCTGACGGCCTGATGTGTAGAGTGTCTAACAAGCCACCCTTGTTTCATCAGGGCAGTGGCCTGGGACCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS CAA 72 bp | CGGAAACGTGTCTCCCCAGAGCTGAGCAGCCCCCGTTaGCTCTGTGGTTTCTTCTGCAGCTCAGTTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RKRVSPELSSPR*LCGFFCSSVMK Trigger: CTTCATAACTGAGCTGCAGAAGAAACCACAGAGCAAACGGGGGCTGCTCAGCTCTGGGGAGACACGTTTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS TCA 72 bp | CTTGTTAGACACTCTACACATCAGGCCGTCAGAATGTaGGCGGTTCCAGGCCTTCTCCTCCAGCTGTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LVRHSTHQAVRM*AVPGLLLQLCV Trigger: TACACACAGCTGGAGGAGAAGGCCTGGAACCGCTCACATTCTGACGGCCTGATGTGTAGAGTGTCTAACAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS TCA 72 bp | CAGTGGACTTTTTCACAAAGGTCTCAAGATCGCTTTTaGTGGTGTAGGTACCAGGTCCCAGGCCACTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: QWTFSQRSQDRF*WCRYQVPGHCP Trigger: AGGGCAGTGGCCTGGGACCTGGTACCTACACCATCAAAAGCGATCTTGAGACCTTTGTGAAAAAGTCCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS TCA 72 bp | AACGGTGGCCGGTTGACATGTTTCTGTTCCGTCTCATaGGGAAGCCAAGAACCAGGGCCAGCTATATCCATA | + |
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Preference number: 6 (lower is better) Translates to: NGGRLTCFCSVS*GSQEPGPAISI Trigger: TATGGATATAGCTGGCCCTGGTTCTTGGCTTCCTCATGAGACGGAACAGAAACATGTCAACCGGCCACCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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| CDS TCA 72 bp | ATCCTGAGCCCAACTTCTGTTCCAGGAACTTCTTGCTaGAGCAGGTATCCTTGGAGTTATAGGTCCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: ILSPTSVPGTSC*SRYPWSYRSQV Trigger: GACCTGGGACCTATAACTCCAAGGATACCTGCTTCAGCAAGAAGTTCCTGGAACAGAAGTTGGGCTCAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067387.9 ENSMUST00000106788.2 ENSMUST00000189032.7 |
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