Pregenerated sensors for LETMD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037353Ensembl transcript IDs: ENSMUST00000037001.10, ENSMUST00000229012.2, ENSMUST00000229648.2, ENSMUST00000230294.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAACACCCCAGAGCTTCGTGGGCTCCTTGCCGGTGTTCCAGCGCCTaGGAGCTGGGGGTAGGAAGACCAGATCTCAAGGTCCTCTTCGGC | + |
Preference number: 1 (lower is better) Translates to: QHPRASWAPCRCSSA*ELGVGRPDLKVLFG Trigger: GCCGAAGAGGACCTTGAGATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCACGAAGCTCTGGGGTGTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR CCA 90 bp | CAATCCCCAGCTTTGCCAGAGCCCTGTCCAGCTGGTGGATCACGGTaGTGTGACTCTTTAGCCGCTGCCTCAGCAAGGGCGGGGGCAGGT | + |
Preference number: 1 (lower is better) Translates to: QSPALPEPCPAGGSR*CDSLAAASARAGAG Trigger: ACCTGCCCCCGCCCTTGCTGAGGCAGCGGCTAAAGAGTCACACCACCGTGATCCACCAGCTGGACAGGGCTCTGGCAAAGCTGGGGATTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR TCA 90 bp | GGCCAGTGCAGCCGCAGCACCCGAGTCTGGAGAGAGAGGATCCCTTaGGCACAGGGATTGGAGGCCAGCCTGGGCAACAGAGACTCATCT | + |
Preference number: 1 (lower is better) Translates to: GQCSRSTRVWRERIP*AQGLEASLGNRDSS Trigger: AGATGAGTCTCTGTTGCCCAGGCTGGCCTCCAATCCCTGTGCTCAAGGGATCCTCTCTCTCCAGACTCGGGTGCTGCGGCTGCACTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR TCA 90 bp | GACTCTTTAGCCGCTGCCTCAGCAAGGGCGGGGGCAGGTAAGGTGTaGGGAGCATGGCCTGGCTCAAGGCTCTCATCTGCGAGGCTTGGA | + |
Preference number: 1 (lower is better) Translates to: DSLAAASARAGAGKV*GAWPGSRLSSARLG Trigger: TCCAAGCCTCGCAGATGAGAGCCTTGAGCCAGGCCATGCTCCTCACACCTTACCTGCCCCCGCCCTTGCTGAGGCAGCGGCTAAAGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 90 bp | CTGGCTGCTTGTAACTGGCTTCAGAGCCTGGGACCTCTGGAGCCCTaGGTGGAAAGATACCTTGGTGCACAGGTCTGTCAGCTGCCTCCG | + |
Preference number: 1 (lower is better) Translates to: LAACNWLQSLGPLEP*VERYLGAQVCQLPP Trigger: CGGAGGCAGCTGACAGACCTGTGCACCAAGGTATCTTTCCACCCAGGGCTCCAGAGGTCCCAGGCTCTGAAGCCAGTTACAAGCAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR GCA 90 bp | TGTTGGCGCAGGGCCAGGCATGGGTGCCCTCACCCCAGAGTAAGCTaGACTGTTCTTGGTACCAGAGATCCGCTAGTGCACAAAGACTCG | + |
Preference number: 1 (lower is better) Translates to: CWRRARHGCPHPRVS*TVLGTRDPLVHKDS Trigger: CGAGTCTTTGTGCACTAGCGGATCTCTGGTACCAAGAACAGTGCAGCTTACTCTGGGGTGAGGGCACCCATGCCTGGCCCTGCGCCAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR CCA 90 bp | GCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTaGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCC | + |
Preference number: 1 (lower is better) Translates to: ASHTSGAHRQLTGAS*SHTTTLGDCRTMPS Trigger: GGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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3UTR TCA 90 bp | CAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTaGCTGCAGGACAATGCCGTCCTTTCCGTGGGGTTCACTCAGCGC | + |
Preference number: 1 (lower is better) Translates to: QTADRCFLVPHHYTR*LQDNAVLSVGFTQR Trigger: GCGCTGAGTGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR GCA 90 bp | TGCAGCAAGAGGGACAGCTCGGGTTCTTTCAGGCTACAGGAGATGTaGAACCATTCCCCCAGCCAGGCTCGACACCTGTCGTCAGCAATG | + |
Preference number: 1 (lower is better) Translates to: CSKRDSSGSFRLQEM*NHSPSQARHLSSAM Trigger: CATTGCTGACGACAGGTGTCGAGCCTGGCTGGGGGAATGGTTGCACATCTCCTGTAGCCTGAAAGAACCCGAGCTGTCCCTCTTGCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR GCA 90 bp | CAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTGACTaGAGGACAATGCCGTCCTTTCCGTGGGGTTCACTCAGCGCCTTG | + |
Preference number: 1 (lower is better) Translates to: QLTGASWSHTTTLGD*RTMPSFPWGSLSAL Trigger: CAAGGCGCTGAGTGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 90 bp | TCCTTTCCGTGGGGTTCACTCAGCGCCTTGTCTCAAGGTAGTTGGTaGAGAGCAGGACCACGTTGTGCAGCAAGAGGGACAGCTCGGGTT | + |
Preference number: 1 (lower is better) Translates to: SFPWGSLSALSQGSW*RAGPRCAARGTARV Trigger: AACCCGAGCTGTCCCTCTTGCTGCACAACGTGGTCCTGCTCTCCACCAACTACCTTGAGACAAGGCGCTGAGTGAACCCCACGGAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR GCA 90 bp | GGTAGAGTTCAAGCCACGAAGATAGCAAGCCGATTTCACTTCCTGTaGAGTCAGCTGGCCAATCCCCAGCTTTGCCAGAGCCCTGTCCAG | + |
Preference number: 1 (lower is better) Translates to: GRVQATKIASRFHFL*SQLANPQLCQSPVQ Trigger: CTGGACAGGGCTCTGGCAAAGCTGGGGATTGGCCAGCTGACTGCACAGGAAGTGAAATCGGCTTGCTATCTTCGTGGCTTGAACTCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 90 bp | CACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTaGGGTTCACTCAGCGCCTTGTCTCAAGGTAGTTGGTGGAGAGCA | + |
Preference number: 1 (lower is better) Translates to: HTTTLGDCRTMPSFP*GSLSALSQGSWWRA Trigger: TGCTCTCCACCAACTACCTTGAGACAAGGCGCTGAGTGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR GCA 90 bp | GCAAATCTCCTGGTCTCCCAGGGCTGGGCAGTAATTAGTACCTTGTaGGTTTTTGACCCACAGCCTAGAGAAGGCAGCCACTGCTGGTTA | + |
Preference number: 1 (lower is better) Translates to: ANLLVSQGWAVISTL*VFDPQPREGSHCWL Trigger: TAACCAGCAGTGGCTGCCTTCTCTAGGCTGTGGGTCAAAAACGCACAAGGTACTAATTACTGCCCAGCCCTGGGAGACCAGGAGATTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR TCA 90 bp | GATACCTTGGTGCACAGGTCTGTCAGCTGCCTCCGGAGTTTCTCATaGGAAACAAAAGTGCTGGCCCTTCTTAGATGTGTGATGACTTCC | + |
Preference number: 1 (lower is better) Translates to: DTLVHRSVSCLRSFS*ETKVLALLRCVMTS Trigger: GGAAGTCATCACACATCTAAGAAGGGCCAGCACTTTTGTTTCTCATGAGAAACTCCGGAGGCAGCTGACAGACCTGTGCACCAAGGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 90 bp | AAGCCCAACTCACTATCTATTGCAAATCTCCTGGTCTCCCAGGGCTaGGCAGTAATTAGTACCTTGTGCGTTTTTGACCCACAGCCTAGA | + |
Preference number: 1 (lower is better) Translates to: KPNSLSIANLLVSQG*AVISTLCVFDPQPR Trigger: TCTAGGCTGTGGGTCAAAAACGCACAAGGTACTAATTACTGCCCAGCCCTGGGAGACCAGGAGATTTGCAATAGATAGTGAGTTGGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATCCACTGCCGGGGTGTTaGCGCAGGGCCAGGCATGGG | + |
Preference number: 2 (lower is better) Translates to: WAPCRCSSAWELGVGRPDPLPGC*RRARHG Trigger: CCCATGCCTGGCCCTGCGCCAACACCCCGGCAGTGG...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR GCA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATAGCAGGACCACGTTGTaGAGCAAGAGGGACAGCTCG | + |
Preference number: 2 (lower is better) Translates to: WAPCRCSSAWELGVGRPDSRTTL*SKRDSS Trigger: CGAGCTGTCCCTCTTGCTGCACAACGTGGTCCTGCT...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CCA 90 bp | AGAAAAACCACTGCCGGGGTGTTGGCGCAGGGCCAGGCATGGGTGCCCTCACCCGATTGGAGGCCAGCCTaGGCAACAGAGACTCATCTC | + |
Preference number: 2 (lower is better) Translates to: RKTTAGVLAQGQAWVPSPDWRPA*ATETHL Trigger: GAGATGAGTCTCTGTTGCCCAGGCTGGCCTCCAATC...GGGTGAGGGCACCCATGCCTGGCCCTGCGCCAACACCCCGGCAGTGGTTTTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | ACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCACGGTGTTCCAGCGCCTaGGAGCTGGGGGTAGGAAGA | + |
Preference number: 2 (lower is better) Translates to: TAWKVRHWGQTQGGARQPRCSSA*ELGVGR Trigger: TCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCG...TGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | GAGGAGCATGGCCTGGCTCAAGGCTCTCATCTGCGAGGCTTGGAGCTGGCTGAAACTGGCTTCAGAGCCTaGGACCTCTGGAGCCCTGGG | + |
Preference number: 2 (lower is better) Translates to: EEHGLAQGSHLRGLELAETGFRA*DLWSPG Trigger: CCCAGGGCTCCAGAGGTCCCAGGCTCTGAAGCCAGT...TTCAGCCAGCTCCAAGCCTCGCAGATGAGAGCCTTGAGCCAGGCCATGCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CCA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATCTCTGGAGCCCTGGGTaGAAAGATACCTTGGTGCAC | + |
Preference number: 2 (lower is better) Translates to: WAPCRCSSAWELGVGRPDLWSPG*KDTLVH Trigger: GTGCACCAAGGTATCTTTCCACCCAGGGCTCCAGAG...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CCA 90 bp | ACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTGGACCTCTGGAGCCCTaGGTGGAAAGATACCTTGGT | + |
Preference number: 2 (lower is better) Translates to: TGDKRREGPGSHSFSPPPGPLEP*VERYLG Trigger: ACCAAGGTATCTTTCCACCCAGGGCTCCAGAGGTCC...AGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CCA 90 bp | ACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTCTGGCTGCTTGTAACTaGCTTCAGAGCCTGGGACCT | + |
Preference number: 2 (lower is better) Translates to: TGDKRREGPGSHSFSPPPLAACN*LQSLGP Trigger: AGGTCCCAGGCTCTGAAGCCAGTTACAAGCAGCCAG...AGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR GCA 90 bp | CGCAGGGCCAGGCATGGGTGCCCTCACCCCAGAGTAAGCTGCACTGTTCTTGGTGGAAAGATACCTTGGTaGACAGGTCTGTCAGCTGCC | + |
Preference number: 2 (lower is better) Translates to: RRARHGCPHPRVSCTVLGGKIPW*TGLSAA Trigger: GGCAGCTGACAGACCTGTGCACCAAGGTATCTTTCC...ACCAAGAACAGTGCAGCTTACTCTGGGGTGAGGGCACCCATGCCTGGCCCTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR GCA 90 bp | GACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCCGATTTCACTTCCTGTaGAGTCAGCTGGCCAATCCC | + |
Preference number: 2 (lower is better) Translates to: DSLESKTLGTNAGRGQAARFHFL*SQLANP Trigger: GGGATTGGCCAGCTGACTGCACAGGAAGTGAAATCG...GGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CCA 90 bp | ACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGGTTCACTCAGCCGGTGTTCCAGCGCCTaGGAGCTGGGGGTAGGAAGA | + |
Preference number: 2 (lower is better) Translates to: TTLGDCRTMPSFPWGSLSRCSSA*ELGVGR Trigger: TCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCG...GCTGAGTGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CCA 90 bp | ACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCACGCTCCAGGAGGCTGTaGCAGAATTGTCTGTCAGGA | + |
Preference number: 2 (lower is better) Translates to: TAWKVRHWGQTQGGARQPRSRRL*QNCLSG Trigger: TCCTGACAGACAATTCTGCCACAGCCTCCTGGAGCG...TGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | CGCAGGGCCAGGCATGGGTGCCCTCACCCCAGAGTAAGCTGCACTGTTCTTGGTCTGACAGGTGCTTCTTaGTCCCACACCACTACACTA | + |
Preference number: 2 (lower is better) Translates to: RRARHGCPHPRVSCTVLGLTGAS*SHTTTL Trigger: TAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAG...ACCAAGAACAGTGCAGCTTACTCTGGGGTGAGGGCACCCATGCCTGGCCCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | GGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTTGCCGCTTGAGCACAGGGATTaGAGGCCAGCCTGGGCAACA | + |
Preference number: 2 (lower is better) Translates to: GKKHSAKTTPQSFVGSLPLEHRD*RPAWAT Trigger: TGTTGCCCAGGCTGGCCTCCAATCCCTGTGCTCAAG...CGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | AGGAAAACAAGGCTCGGCTGTAGAGAACGTGGCAGTGAGGCCAGTGCAGCCGCACGCTCCAGGAGGCTGTaGCAGAATTGTCTGTCAGGA | + |
Preference number: 2 (lower is better) Translates to: RKTRLGCRERGSEASAAARSRRL*QNCLSG Trigger: TCCTGACAGACAATTCTGCCACAGCCTCCTGGAGCG...TGCGGCTGCACTGGCCTCACTGCCACGTTCTCTACAGCCGAGCCTTGTTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | GGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTTGCCGAGAGCCTGGGACCTCTaGAGCCCTGGGTGGAAAGAT | + |
Preference number: 2 (lower is better) Translates to: GKKHSAKTTPQSFVGSLPRAWDL*SPGWKD Trigger: ATCTTTCCACCCAGGGCTCCAGAGGTCCCAGGCTCT...CGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR TCA 90 bp | GACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCGTGTCCATAGAATACTaGGAGGAGGGGTGGAAGTTA | + |
Preference number: 2 (lower is better) Translates to: DSLESKTLGTNAGRGQAAVSIEY*EEGWKL Trigger: TAACTTCCACCCCTCCTCTCAGTATTCTATGGACAC...GGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR TCA 90 bp | GCACACATGGGTTTGTTAGGCTCAAGCTGTGAAGGAATGTCTATAGCTCCCAGGGTGCGCACAGACAGCTaGCAGGTGCTTCTTGGTCCC | + |
Preference number: 2 (lower is better) Translates to: AHMGLLGSSCEGMSIAPRVRTDS*QVLLGP Trigger: GGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCAC...CCTGGGAGCTATAGACATTCCTTCACAGCTTGAGCCTAACAAACCCATGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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3UTR-3UTR GCA 90 bp | GCAGCCGCAGCACCCGAGTCTGGAGAGAGAGGATCCCTTGAGCACAGGGATTGGCATGAGAAACAAAAGTaGTGGCCCTTCTTAGATGTG | + |
Preference number: 2 (lower is better) Translates to: AAAAPESGERGSLEHRDWHEKQK*WPFLDV Trigger: CACATCTAAGAAGGGCCAGCACTTTTGTTTCTCATG...CCAATCCCTGTGCTCAAGGGATCCTCTCTCTCCAGACTCGGGTGCTGCGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CAA 90 bp | ATTGCAAATCTCCTGGTCTCCCAGGGCTGGGCAGTAATTAGTACCTaGTGCGTTTTTGACCCACAGCCTAGAGAAGGCAGCCACTGCTGG | + |
Preference number: 2 (lower is better) Translates to: IANLLVSQGWAVIST*CVFDPQPREGSHCW Trigger: CCAGCAGTGGCTGCCTTCTCTAGGCTGTGGGTCAAAAACGCACAAGGTACTAATTACTGCCCAGCCCTGGGAGACCAGGAGATTTGCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | GGTCTCAGGAAAACAAGGCTCGGCTGTAGAGAACGTGGCAGTGAGGCCAGTGCAACTGCTGGTTACAGATaGCTTAGTGCAACACAGTGG | + |
Preference number: 2 (lower is better) Translates to: GLRKTRLGCRERGSEASATAGYR*LSATQW Trigger: CCACTGTGTTGCACTAAGCCATCTGTAACCAGCAGT...TGCACTGGCCTCACTGCCACGTTCTCTACAGCCGAGCCTTGTTTTCCTGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CCA 90 bp | GAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTTTAGAATGTTCCCATAAATCTCAAGGTAGTTGGTaGAGAGCAGGACCACGTTGT | + |
Preference number: 2 (lower is better) Translates to: EGPGSHSFSPPPLECSHKSQGSW*RAGPRC Trigger: ACAACGTGGTCCTGCTCTCCACCAACTACCTTGAGA...TTTATGGGAACATTCTAAAGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CCA 90 bp | AGATCTCAAGGTCCTCTTCGGCTACATGAGACACGGGGTCTCAGGAAAACAAGGCACATGATTCCCACCTaGGCAAAGGCTGACTTTATA | + |
Preference number: 2 (lower is better) Translates to: RSQGPLRLHETRGLRKTRHMIPT*AKADFI Trigger: TATAAAGTCAGCCTTTGCCCAGGTGGGAATCATGTG...CCTTGTTTTCCTGAGACCCCGTGTCTCATGTAGCCGAAGAGGACCTTGAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR TCA 90 bp | GACTTTATAGGACCTAAGTATTACATCACAATAAAAGTTCAGTACCAGAGATGCGTGCGCACAGACAGCTaGCAGGTGCTTCTTGGTCCC | + |
Preference number: 2 (lower is better) Translates to: DFIGPKYYITIKVQYQRCVRTDS*QVLLGP Trigger: GGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCAC...GCATCTCTGGTACTGAACTTTTATTGTGATGTAATACTTAGGTCCTATAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR TCA 90 bp | AAGTATTACATCACAATAAAAGTTCAGTACCAGAGATGCTTGCCAGTTCCAGGTCTCCGGAGTTTCTCATaGGAAACAAAAGTGCTGGCC | + |
Preference number: 2 (lower is better) Translates to: KYYITIKVQYQRCLPVPGLRSFS*ETKVLA Trigger: GGCCAGCACTTTTGTTTCTCATGAGAAACTCCGGAG...ACCTGGAACTGGCAAGCATCTCTGGTACTGAACTTTTATTGTGATGTAATACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CCA 90 bp | GACTTTATAGGACCTAAGTATTACATCACAATAAAAGTTCAGTACCAGAGATGCCTGACAGGTGCTTCTTaGTCCCACACCACTACACTA | + |
Preference number: 2 (lower is better) Translates to: DFIGPKYYITIKVQYQRCLTGAS*SHTTTL Trigger: TAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAG...GCATCTCTGGTACTGAACTTTTATTGTGATGTAATACTTAGGTCCTATAAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CAA 90 bp | ACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTACCACTGCCGGGGTGTaGGCGCAGGGCCAGGCATGG | + |
Preference number: 3 (lower is better) Translates to: TGDKRREGPGSHSFSPPPTTAGV*AQGQAW Trigger: CCATGCCTGGCCCTGCGCCAACACCCCGGCAGTGGT...AGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR GCA 72 bp | CAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTTaGCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGA | + |
Preference number: 3 (lower is better) Translates to: QPRQHPRASWAP*RCSSAWELGVG Trigger: TCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR GCA 72 bp | CCACTGCCGGGGTGTTGGCGCAGGGCCAGGCATGGGTaGCCTCACCCCAGAGTAAGCTGCACTGTTCTTGGT | + |
Preference number: 3 (lower is better) Translates to: PLPGCWRRARHG*PHPRVSCTVLG Trigger: ACCAAGAACAGTGCAGCTTACTCTGGGGTGAGGGCACCCATGCCTGGCCCTGCGCCAACACCCCGGCAGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
||
3UTR-3UTR CAA 90 bp | AGAAAAACCACTGCCGGGGTGTTGGCGCAGGGCCAGGCATGGGTGCCCTCACCCTCTCATCTGCGAGGCTaGGAGCTGGCTGAAGCCCAA | + |
Preference number: 3 (lower is better) Translates to: RKTTAGVLAQGQAWVPSPSHLRG*ELAEAQ Trigger: TTGGGCTTCAGCCAGCTCCAAGCCTCGCAGATGAGA...GGGTGAGGGCACCCATGCCTGGCCCTGCGCCAACACCCCGGCAGTGGTTTTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR-3UTR CAA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATGAGAGCAGGACCACGTaGTGCAGCAAGAGGGACAGC | + |
Preference number: 3 (lower is better) Translates to: WAPCRCSSAWELGVGRPDESRTT*CSKRDS Trigger: GCTGTCCCTCTTGCTGCACAACGTGGTCCTGCTCTC...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR CCA 72 bp | AGAGCTTCGTGGGCTCCTTGCCGGTGTTCCAGCGCCTaGGAGCTGGGGGTAGGAAGACCAGATCTCAAGGTC | + |
Preference number: 3 (lower is better) Translates to: RASWAPCRCSSA*ELGVGRPDLKV Trigger: GACCTTGAGATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCACGAAGCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
||
3UTR CCA 72 bp | GCTTTGCCAGAGCCCTGTCCAGCTGGTGGATCACGGTaGTGTGACTCTTTAGCCGCTGCCTCAGCAAGGGCG | + |
Preference number: 3 (lower is better) Translates to: ALPEPCPAGGSR*CDSLAAASARA Trigger: CGCCCTTGCTGAGGCAGCGGCTAAAGAGTCACACCACCGTGATCCACCAGCTGGACAGGGCTCTGGCAAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR CCA 72 bp | AAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTaGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTG | + |
Preference number: 3 (lower is better) Translates to: KSTQPRQHPRAS*APCRCSSAWEL Trigger: CAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
||
3UTR CCA 72 bp | CCTAGGGGCTGTGTGACAGCCTGGAAAGTAAGACACTaGGGACAAACGCAGGGAGGGGCCAGGCAGCCATTC | + |
Preference number: 3 (lower is better) Translates to: PRGCVTAWKVRH*GQTQGGARQPF Trigger: GAATGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGTCACACAGCCCCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
||
3UTR-3UTR CAA 90 bp | ACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTGCTGACAGGTGCTTCTaGGTCCCACACCACTACACT | + |
Preference number: 3 (lower is better) Translates to: TGDKRREGPGSHSFSPPPADRCF*VPHHYT Trigger: AGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGC...AGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
||
3UTR GCA 72 bp | AGGGCCAGGCATGGGTGCCCTCACCCCAGAGTAAGCTaGACTGTTCTTGGTACCAGAGATCCGCTAGTGCAC | + |
Preference number: 3 (lower is better) Translates to: RARHGCPHPRVS*TVLGTRDPLVH Trigger: GTGCACTAGCGGATCTCTGGTACCAAGAACAGTGCAGCTTACTCTGGGGTGAGGGCACCCATGCCTGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR GCA 72 bp | AGGGACAGCTCGGGTTCTTTCAGGCTACAGGAGATGTaGAACCATTCCCCCAGCCAGGCTCGACACCTGTCG | + |
Preference number: 3 (lower is better) Translates to: RDSSGSFRLQEM*NHSPSQARHLS Trigger: CGACAGGTGTCGAGCCTGGCTGGGGGAATGGTTGCACATCTCCTGTAGCCTGAAAGAACCCGAGCTGTCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR CCA 72 bp | CCTGGGACCTCTGGAGCCCTGGGTGGAAAGATACCTTaGTGCACAGGTCTGTCAGCTGCCTCCGGAGTTTCT | + |
Preference number: 3 (lower is better) Translates to: PGTSGALGGKIP*CTGLSAASGVS Trigger: AGAAACTCCGGAGGCAGCTGACAGACCTGTGCACCAAGGTATCTTTCCACCCAGGGCTCCAGAGGTCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR CCA 72 bp | ACTGGCTTCAGAGCCTGGGACCTCTGGAGCCCTGGGTaGAAAGATACCTTGGTGCACAGGTCTGTCAGCTGC | + |
Preference number: 3 (lower is better) Translates to: TGFRAWDLWSPG*KDTLVHRSVSC Trigger: GCAGCTGACAGACCTGTGCACCAAGGTATCTTTCCACCCAGGGCTCCAGAGGTCCCAGGCTCTGAAGCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR CCA 72 bp | CCGTGGGGTTCACTCAGCGCCTTGTCTCAAGGTAGTTaGTGGAGAGCAGGACCACGTTGTGCAGCAAGAGGG | + |
Preference number: 3 (lower is better) Translates to: PWGSLSALSQGS*WRAGPRCAARG Trigger: CCCTCTTGCTGCACAACGTGGTCCTGCTCTCCACCAACTACCTTGAGACAAGGCGCTGAGTGAACCCCACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR-3UTR CAA 90 bp | GGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTTGCCGGAGAGAGAGGATCCCTaGAGCACAGGGATTGGAGGC | + |
Preference number: 3 (lower is better) Translates to: GKKHSAKTTPQSFVGSLPEREDP*STGIGG Trigger: GCCTCCAATCCCTGTGCTCAAGGGATCCTCTCTCTC...CGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
||
3UTR CCA 72 bp | GACCCAGACTGGCTGCTTGTAACTGGCTTCAGAGCCTaGGACCTCTGGAGCCCTGGGTGGAAAGATACCTTG | + |
Preference number: 3 (lower is better) Translates to: DPDWLLVTGFRA*DLWSPGWKDTL Trigger: CAAGGTATCTTTCCACCCAGGGCTCCAGAGGTCCCAGGCTCTGAAGCCAGTTACAAGCAGCCAGTCTGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR-3UTR CAA 90 bp | GACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCGAAACAGCCCTACTTTaGGTCTCACCAGAAAGGATG | + |
Preference number: 3 (lower is better) Translates to: DSLESKTLGTNAGRGQAAETALL*VSPERM Trigger: CATCCTTTCTGGTGAGACCAAAAGTAGGGCTGTTTC...GGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR TCA 72 bp | GACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTaGCTGCAGGACAATGCCGTCCTTTCCGTGGGGTTC | + |
Preference number: 3 (lower is better) Translates to: DRCFLVPHHYTR*LQDNAVLSVGF Trigger: GAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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3UTR CCA 72 bp | TGTAACTGGCTTCAGAGCCTGGGACCTCTGGAGCCCTaGGTGGAAAGATACCTTGGTGCACAGGTCTGTCAG | + |
Preference number: 3 (lower is better) Translates to: CNWLQSLGPLEP*VERYLGAQVCQ Trigger: CTGACAGACCTGTGCACCAAGGTATCTTTCCACCCAGGGCTCCAGAGGTCCCAGGCTCTGAAGCCAGTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
||
3UTR CCA 72 bp | GAAGCAATCTCTGAGAGCCAGGACGTCCTGTGCTGCTaGGTGGGTGCCACTCTGCACCTTGCAAGAAATGAG | + |
Preference number: 3 (lower is better) Translates to: EAISESQDVLCC*VGATLHLARNE Trigger: CTCATTTCTTGCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCTCTCAGAGATTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 72 bp | TGGGGTTCACTCAGCGCCTTGTCTCAAGGTAGTTGGTaGAGAGCAGGACCACGTTGTGCAGCAAGAGGGACA | + |
Preference number: 3 (lower is better) Translates to: WGSLSALSQGSW*RAGPRCAARGT Trigger: TGTCCCTCTTGCTGCACAACGTGGTCCTGCTCTCCACCAACTACCTTGAGACAAGGCGCTGAGTGAACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CAA 90 bp | ACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTTTAGCACACATGGGTTaGTTAGGCTCAAGCTGTGAA | + |
Preference number: 3 (lower is better) Translates to: TGDKRREGPGSHSFSPPPLAHMG*LGSSCE Trigger: TTCACAGCTTGAGCCTAACAAACCCATGTGTGCTAA...AGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR GCA 72 bp | CTGGTCTCCCAGGGCTGGGCAGTAATTAGTACCTTGTaGGTTTTTGACCCACAGCCTAGAGAAGGCAGCCAC | + |
Preference number: 3 (lower is better) Translates to: LVSQGWAVISTL*VFDPQPREGSH Trigger: GTGGCTGCCTTCTCTAGGCTGTGGGTCAAAAACGCACAAGGTACTAATTACTGCCCAGCCCTGGGAGACCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR GCA 72 bp | CAAGCCACGAAGATAGCAAGCCGATTTCACTTCCTGTaGAGTCAGCTGGCCAATCCCCAGCTTTGCCAGAGC | + |
Preference number: 3 (lower is better) Translates to: QATKIASRFHFL*SQLANPQLCQS Trigger: GCTCTGGCAAAGCTGGGGATTGGCCAGCTGACTGCACAGGAAGTGAAATCGGCTTGCTATCTTCGTGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 72 bp | ACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTaGTCCCACACCACTACACTAGGTGACTGCAGGACA | + |
Preference number: 3 (lower is better) Translates to: TSGAHRQLTGAS*SHTTTLGDCRT Trigger: TGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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3UTR CCA 72 bp | TGGGTGCCCTCACCCCAGAGTAAGCTGCACTGTTCTTaGTACCAGAGATCCGCTAGTGCACAAAGACTCGGT | + |
Preference number: 3 (lower is better) Translates to: WVPSPQSKLHCS*YQRSASAQRLG Trigger: ACCGAGTCTTTGTGCACTAGCGGATCTCTGGTACCAAGAACAGTGCAGCTTACTCTGGGGTGAGGGCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR CCA 72 bp | CAATCTCTGAGAGCCAGGACGTCCTGTGCTGCTGGGTaGGTGCCACTCTGCACCTTGCAAGAAATGAGTAGA | + |
Preference number: 3 (lower is better) Translates to: QSLRARTSCAAG*VPLCTLQEMSR Trigger: TCTACTCATTTCTTGCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCTCTCAGAGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 72 bp | ACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTaGGGTTCACTCAGCGCCTTGTCTCAAGGTAGTTGG | + |
Preference number: 3 (lower is better) Translates to: TLGDCRTMPSFP*GSLSALSQGSW Trigger: CCAACTACCTTGAGACAAGGCGCTGAGTGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CAA 90 bp | ACATGTAAGGTCCCTAGGGGCTGTGTGACAGCCTGGAAAGTAAGACACTGGGGAGCTGACAGGTGCTTCTaGGTCCCACACCACTACACT | + |
Preference number: 3 (lower is better) Translates to: TCKVPRGCVTAWKVRHWGADRCF*VPHHYT Trigger: AGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGC...TCCCCAGTGTCTTACTTTCCAGGCTGTCACACAGCCCCTAGGGACCTTACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CAA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATAATTGTCTGTCAGGATaGCCAGGTTATACAGTAAGA | + |
Preference number: 3 (lower is better) Translates to: WAPCRCSSAWELGVGRPDNCLSG*PGYTVR Trigger: TCTTACTGTATAACCTGGCAATCCTGACAGACAATT...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CAA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATCAAGAAATCAATTTGTaGTTTGGGGGTCCAGAAATG | + |
Preference number: 3 (lower is better) Translates to: WAPCRCSSAWELGVGRPDQEINL*FGGPEM Trigger: CATTTCTGGACCCCCAAACAACAAATTGATTTCTTG...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR-3UTR CAA 90 bp | AGATCTCAAGGTCCTCTTCGGCTACATGAGACACGGGGTCTCAGGAAAACAAGGGCTGACAGGTGCTTCTaGGTCCCACACCACTACACT | + |
Preference number: 3 (lower is better) Translates to: RSQGPLRLHETRGLRKTRADRCF*VPHHYT Trigger: AGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGC...CCTTGTTTTCCTGAGACCCCGTGTCTCATGTAGCCGAAGAGGACCTTGAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CAA 90 bp | ACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCAAATTGTCTGTCAGGATaGCCAGGTTATACAGTAAGA | + |
Preference number: 3 (lower is better) Translates to: TAWKVRHWGQTQGGARQPNCLSG*PGYTVR Trigger: TCTTACTGTATAACCTGGCAATCCTGACAGACAATT...TGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CAA 90 bp | GGTCTCAGGAAAACAAGGCTCGGCTGTAGAGAACGTGGCAGTGAGGCCAGTGCAGTCCAAGAAATCAATTaGTTGTTTGGGGGTCCAGAA | + |
Preference number: 3 (lower is better) Translates to: GLRKTRLGCRERGSEASAVQEIN*LFGGPE Trigger: TTCTGGACCCCCAAACAACAAATTGATTTCTTGGAC...TGCACTGGCCTCACTGCCACGTTCTCTACAGCCGAGCCTTGTTTTCCTGAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR TCA 72 bp | GTGCACAGGTCTGTCAGCTGCCTCCGGAGTTTCTCATaGGAAACAAAAGTGCTGGCCCTTCTTAGATGTGTG | + |
Preference number: 3 (lower is better) Translates to: VHRSVSCLRSFS*ETKVLALLRCV Trigger: CACACATCTAAGAAGGGCCAGCACTTTTGTTTCTCATGAGAAACTCCGGAGGCAGCTGACAGACCTGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 72 bp | GCCCATGATAGTGACGAGGAGAAACAGCCCTACTTTTaGTCTCACCAGAAAGGATGGGTGTGGCTCATGCTT | + |
Preference number: 3 (lower is better) Translates to: AHDSDEEKQPYF*SHQKGWVWLML Trigger: AAGCATGAGCCACACCCATCCTTTCTGGTGAGACCAAAAGTAGGGCTGTTTCTCCTCGTCACTATCATGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CAA 90 bp | ACATGTAAGGTCCCTAGGGGCTGTGTGACAGCCTGGAAAGTAAGACACTGGGGATTAGCACACATGGGTTaGTTAGGCTCAAGCTGTGAA | + |
Preference number: 3 (lower is better) Translates to: TCKVPRGCVTAWKVRHWGLAHMG*LGSSCE Trigger: TTCACAGCTTGAGCCTAACAAACCCATGTGTGCTAA...TCCCCAGTGTCTTACTTTCCAGGCTGTCACACAGCCCCTAGGGACCTTACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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3UTR-3UTR CAA 90 bp | GAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTTTAGAATGTTCCCATAAAGTGCCACTCTGCACCTaGCAAGAAATGAGTAGATTT | + |
Preference number: 3 (lower is better) Translates to: EGPGSHSFSPPPLECSHKVPLCT*QEMSRF Trigger: AAATCTACTCATTTCTTGCAAGGTGCAGAGTGGCAC...TTTATGGGAACATTCTAAAGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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3UTR CCA 72 bp | TCACTATCTATTGCAAATCTCCTGGTCTCCCAGGGCTaGGCAGTAATTAGTACCTTGTGCGTTTTTGACCCA | + |
Preference number: 3 (lower is better) Translates to: SLSIANLLVSQG*AVISTLCVFDP Trigger: TGGGTCAAAAACGCACAAGGTACTAATTACTGCCCAGCCCTGGGAGACCAGGAGATTTGCAATAGATAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATCCAGAGCGGCCCAGCTaGAGCCTCCGGGTGACAAAG | + |
Preference number: 4 (lower is better) Translates to: WAPCRCSSAWELGVGRPDPERPS*SLRVTK Trigger: CTTTGTCACCCGGAGGCTGCAGCTGGGCCGCTCTGG...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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3UTR CAA 72 bp | TCAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTaGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGG | + |
Preference number: 4 (lower is better) Translates to: SAKTTPQSFVGS*PVFQRLGAGGR Trigger: CCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | ACCCACTCCGCTGCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTGTGCTGCTGGGTGGGTaGCACTCTGCACCTTGGTGC | + |
Preference number: 4 (lower is better) Translates to: THSAASHTSGAHRQLTGAVLLGG*HSAPWC Trigger: GCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCAC...AGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGCAGCGGAGTGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCAGCCGCAGCACCCGAGTCTGGAGAGAGAGGATCCCTTGAGCACAGGGATTGGAGCCAGGACGTCCTGTaGTGCTGGGTGGGTGCCACT | + |
Preference number: 4 (lower is better) Translates to: AAAAPESGERGSLEHRDWSQDVL*CWVGAT Trigger: AGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCT...CCAATCCCTGTGCTCAAGGGATCCTCTCTCTCCAGACTCGGGTGCTGCGGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCAGCCGCAGCACCCGAGTCTGGAGAGAGAGGATCCCTTGAGCACAGGGATTGGGGGTGGGTGCCACTCTaGACCTTGGTGCACAGGTCT | + |
Preference number: 4 (lower is better) Translates to: AAAAPESGERGSLEHRDWGWVPL*TLVHRS Trigger: AGACCTGTGCACCAAGGTGCAGAGTGGCACCCACCC...CCAATCCCTGTGCTCAAGGGATCCTCTCTCTCCAGACTCGGGTGCTGCGGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
||
CDS-3UTR GCA 90 bp | GGTCTCAGGAAAACAAGGCTCGGCTGTAGAGAACGTGGCAGTGAGGCCAGTGCACCAGAGCGGCCCAGCTaGAGCCTCCGGGTGACAAAG | + |
Preference number: 4 (lower is better) Translates to: GLRKTRLGCRERGSEASAPERPS*SLRVTK Trigger: CTTTGTCACCCGGAGGCTGCAGCTGGGCCGCTCTGG...TGCACTGGCCTCACTGCCACGTTCTCTACAGCCGAGCCTTGTTTTCCTGAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS-3UTR GCA 90 bp | AGGAAAACAAGGCTCGGCTGTAGAGAACGTGGCAGTGAGGCCAGTGCAGCCGCAGTGCTGCTGGGTGGGTaGCACTCTGCACCTTGGTGC | + |
Preference number: 4 (lower is better) Translates to: RKTRLGCRERGSEASAAAVLLGG*HSAPWC Trigger: GCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCAC...TGCGGCTGCACTGGCCTCACTGCCACGTTCTCTACAGCCGAGCCTTGTTTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
||
CDS-3UTR TCA 90 bp | ACATGTAAGGTCCCTAGGGGCTGTGTGACAGCCTGGAAAGTAAGACACTGGGGAGCTGCAGCCTCCGGGTaGCAAAGGGTCCAGGGGCGA | + |
Preference number: 4 (lower is better) Translates to: TCKVPRGCVTAWKVRHWGAAASG*QRVQGR Trigger: TCGCCCCTGGACCCTTTGTCACCCGGAGGCTGCAGC...TCCCCAGTGTCTTACTTTCCAGGCTGTCACACAGCCCCTAGGGACCTTACATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
||
CDS-3UTR TCA 90 bp | GCTTCTTGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTGCTGCAGCCTCCGGGTaGCAAAGGGTCCAGGGGCGA | + |
Preference number: 4 (lower is better) Translates to: ASWSHTTTLGDCRTMPSFAAASG*QRVQGR Trigger: TCGCCCCTGGACCCTTTGTCACCCGGAGGCTGCAGC...AAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
||
CDS-3UTR TCA 90 bp | GCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTGACGGGGCAGGTAAGGTGTaGGGAGCATGGCCTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: AHRQLTGASWSHTTTLGDGAGKV*GAWPGS Trigger: TGAGCCAGGCCATGCTCCTCACACCTTACCTGCCCC...GTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR TCA 90 bp | GGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTGGGGCAGGTAAGGTGTaGGGAGCATGGCCTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: GAHRQLTGASWSHTTTLGGAGKV*GAWPGS Trigger: TGAGCCAGGCCATGCTCCTCACACCTTACCTGCCCC...ACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACCACTCTGCACCTTGGTaGACAGGTCTGTCAGCTGCC | + |
Preference number: 4 (lower is better) Translates to: ASHTSGAHRQLTGASWSHHSAPW*TGLSAA Trigger: GGCAGCTGACAGACCTGTGCACCAAGGTGCAGAGTG...GTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | TGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGTGCTGCTGGGTGGGTaGCACTCTGCACCTTGGTGC | + |
Preference number: 4 (lower is better) Translates to: WSHTTTLGDCRTMPSFPWVLLGG*HSAPWC Trigger: GCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCAC...CCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GGTCTCAGGAAAACAAGGCTCGGCTGTAGAGAACGTGGCAGTGAGGCCAGTGCACAGGACGTCCTGTGCTaGTGGGTGGGTGCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: GLRKTRLGCRERGSEASAQDVLC*WVGATL Trigger: CAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTG...TGCACTGGCCTCACTGCCACGTTCTCTACAGCCGAGCCTTGTTTTCCTGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | TGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGAGCCAGGACGTCCTGTaGTGCTGGGTGGGTGCCACT | + |
Preference number: 4 (lower is better) Translates to: WSHTTTLGDCRTMPSFPWSQDVL*CWVGAT Trigger: AGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCT...CCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACCTCAAGGCTCTCATCTaGGAGGCTTGGAGCTGGCTG | + |
Preference number: 4 (lower is better) Translates to: ASHTSGAHRQLTGASWSHLKALI*EAWSWL Trigger: CAGCCAGCTCCAAGCCTCGCAGATGAGAGCCTTGAG...GTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | ACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCAAGCAGGACCACGTTGTaGAGCAAGAGGGACAGCTCG | + |
Preference number: 4 (lower is better) Translates to: TAWKVRHWGQTQGGARQPSRTTL*SKRDSS Trigger: CGAGCTGTCCCTCTTGCTGCACAACGTGGTCCTGCT...TGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | ACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCATCCTGTGCAGTCAGCTaGCCAATCCCCAGCTTTGCC | + |
Preference number: 4 (lower is better) Translates to: TAWKVRHWGQTQGGARQPSCAVS*PIPSFA Trigger: GGCAAAGCTGGGGATTGGCCAGCTGACTGCACAGGA...TGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR TCA 90 bp | ACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCAGCCTTCGGAGAAAGGTaGAGCTTTGAAGACCGAGGG | + |
Preference number: 4 (lower is better) Translates to: TAWKVRHWGQTQGGARQPAFGER*SFEDRG Trigger: CCCTCGGTCTTCAAAGCTTCACCTTTCTCCGAAGGC...TGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS-3UTR GCA 90 bp | GGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTTGCCGGGGTGGGTGCCACTCTaGACCTTGGTGCACAGGTCT | + |
Preference number: 4 (lower is better) Translates to: GKKHSAKTTPQSFVGSLPGWVPL*TLVHRS Trigger: AGACCTGTGCACCAAGGTGCAGAGTGGCACCCACCC...CGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTGCCAATCCCCAGCTTTaGCAGAGCCCTGTCCAGCTG | + |
Preference number: 4 (lower is better) Translates to: GAHRQLTGASWSHTTTLGANPQL*QSPVQL Trigger: CAGCTGGACAGGGCTCTGGCAAAGCTGGGGATTGGC...ACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | TGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGCCAATCCCCAGCTTTaGCAGAGCCCTGTCCAGCTG | + |
Preference number: 4 (lower is better) Translates to: WSHTTTLGDCRTMPSFPWANPQL*QSPVQL Trigger: CAGCTGGACAGGGCTCTGGCAAAGCTGGGGATTGGC...CCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | GGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTGTGATGACTTCCGAGTaGGACCGCCTCCGGAGACCA | + |
Preference number: 4 (lower is better) Translates to: GAHRQLTGASWSHTTTLGVMTSE*DRLRRP Trigger: TGGTCTCCGGAGGCGGTCCCACTCGGAAGTCATCAC...ACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | GCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTGACGTGATGACTTCCGAGTaGGACCGCCTCCGGAGACCA | + |
Preference number: 4 (lower is better) Translates to: AHRQLTGASWSHTTTLGDVMTSE*DRLRRP Trigger: TGGTCTCCGGAGGCGGTCCCACTCGGAAGTCATCAC...GTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR TCA 90 bp | ACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTCTCCGGAGTTTCTCATaGGAAACAAAAGTGCTGGCC | + |
Preference number: 4 (lower is better) Translates to: TGDKRREGPGSHSFSPPPLRSFS*ETKVLA Trigger: GGCCAGCACTTTTGTTTCTCATGAGAAACTCCGGAG...AGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR TCA 90 bp | ACATGTAAGGTCCCTAGGGGCTGTGTGACAGCCTGGAAAGTAAGACACTGGGGAGGGGCAGGTAAGGTGTaGGGAGCATGGCCTGGCTCA | + |
Preference number: 4 (lower is better) Translates to: TCKVPRGCVTAWKVRHWGGAGKV*GAWPGS Trigger: TGAGCCAGGCCATGCTCCTCACACCTTACCTGCCCC...TCCCCAGTGTCTTACTTTCCAGGCTGTCACACAGCCCCTAGGGACCTTACATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCTTCTTGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCAGGACGTCCTGTGCTaGTGGGTGGGTGCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: ASWSHTTTLGDCRTMPSFQDVLC*WVGATL Trigger: CAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTG...AAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACCGATTTCACTTCCTGTaGAGTCAGCTGGCCAATCCC | + |
Preference number: 4 (lower is better) Translates to: ASHTSGAHRQLTGASWSHRFHFL*SQLANP Trigger: GGGATTGGCCAGCTGACTGCACAGGAAGTGAAATCG...GTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTTGCCGAGCAGGACCACGTTGTaGAGCAAGAGGGACAGCTCG | + |
Preference number: 4 (lower is better) Translates to: GKKHSAKTTPQSFVGSLPSRTTL*SKRDSS Trigger: CGAGCTGTCCCTCTTGCTGCACAACGTGGTCCTGCT...CGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | TGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGCTCATCTGCGAGGCTTaGAGCTGGCTGAAGCCCAAG | + |
Preference number: 4 (lower is better) Translates to: WSHTTTLGDCRTMPSFPWLICEA*SWLKPK Trigger: CTTGGGCTTCAGCCAGCTCCAAGCCTCGCAGATGAG...CCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | GACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCTCTCAAGGTAGTTGGTaGAGAGCAGGACCACGTTGT | + |
Preference number: 4 (lower is better) Translates to: DSLESKTLGTNAGRGQAASQGSW*RAGPRC Trigger: ACAACGTGGTCCTGCTCTCCACCAACTACCTTGAGA...GGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | GACAGCCTGGAAAGTAAGACACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCTTGTCTCAAGGTAGTTaGTGGAGAGCAGGACCACGT | + |
Preference number: 4 (lower is better) Translates to: DSLESKTLGTNAGRGQAALSQGS*WRAGPR Trigger: ACGTGGTCCTGCTCTCCACCAACTACCTTGAGACAA...GGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGTGTCTTACTTTCCAGGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR TCA 90 bp | AGGACGTCCTGTGCTGCTGGGTGGGTGCCACTCTGCACCTTGCAAGAAATGAGTGCCTTCGGAGAAAGGTaGAGCTTTGAAGACCGAGGG | + |
Preference number: 4 (lower is better) Translates to: RTSCAAGWVPLCTLQEMSAFGER*SFEDRG Trigger: CCCTCGGTCTTCAAAGCTTCACCTTTCTCCGAAGGC...ACTCATTTCTTGCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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CDS-3UTR GCA 90 bp | CACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGGTTCACACTCTGCACCTTGGTaGACAGGTCTGTCAGCTGCC | + |
Preference number: 4 (lower is better) Translates to: HTTTLGDCRTMPSFPWGSHSAPW*TGLSAA Trigger: GGCAGCTGACAGACCTGTGCACCAAGGTGCAGAGTG...TGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | AGATCTCAAGGTCCTCTTCGGCTACATGAGACACGGGGTCTCAGGAAAACAAGGCAGGACGTCCTGTGCTaGTGGGTGGGTGCCACTCTG | + |
Preference number: 4 (lower is better) Translates to: RSQGPLRLHETRGLRKTRQDVLC*WVGATL Trigger: CAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTG...CCTTGTTTTCCTGAGACCCCGTGTCTCATGTAGCCGAAGAGGACCTTGAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATAAAAGACCAGGTAGTTaGCAAAGGGTGGAATGGAGA | + |
Preference number: 4 (lower is better) Translates to: WAPCRCSSAWELGVGRPDKRPGS*QRVEWR Trigger: TCTCCATTCCACCCTTTGCCAACTACCTGGTCTTTT...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS-3UTR CCA 90 bp | ACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTCATCTGCGAGGCTTaGAGCTGGCTGAAGCCCAAG | + |
Preference number: 4 (lower is better) Translates to: TSGAHRQLTGASWSHTTTLICEA*SWLKPK Trigger: CTTGGGCTTCAGCCAGCTCCAAGCCTCGCAGATGAG...TGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | CACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGGTTCATCCTGTGCAGTCAGCTaGCCAATCCCCAGCTTTGCC | + |
Preference number: 4 (lower is better) Translates to: HTTTLGDCRTMPSFPWGSSCAVS*PIPSFA Trigger: GGCAAAGCTGGGGATTGGCCAGCTGACTGCACAGGA...TGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | TCCGCTGCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTTGTCTCAAGGTAGTTaGTGGAGAGCAGGACCACGT | + |
Preference number: 4 (lower is better) Translates to: SAASHTSGAHRQLTGASWLSQGS*WRAGPR Trigger: ACGTGGTCCTGCTCTCCACCAACTACCTTGAGACAA...CCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGCAGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATCATGAGAAACAAAAGTaGTGGCCCTTCTTAGATGTG | + |
Preference number: 4 (lower is better) Translates to: WAPCRCSSAWELGVGRPDHEKQK*WPFLDV Trigger: CACATCTAAGAAGGGCCAGCACTTTTGTTTCTCATG...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCACACATGGGTTTGTTAGGCTCAAGCTGTGAAGGAATGTCTATAGCTCCCAGGAGCCAGGACGTCCTGTaGTGCTGGGTGGGTGCCACT | + |
Preference number: 4 (lower is better) Translates to: AHMGLLGSSCEGMSIAPRSQDVL*CWVGAT Trigger: AGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCT...CCTGGGAGCTATAGACATTCCTTCACAGCTTGAGCCTAACAAACCCATGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | AGATCTCAAGGTCCTCTTCGGCTACATGAGACACGGGGTCTCAGGAAAACAAGGGCCAATCCCCAGCTTTaGCAGAGCCCTGTCCAGCTG | + |
Preference number: 4 (lower is better) Translates to: RSQGPLRLHETRGLRKTRANPQL*QSPVQL Trigger: CAGCTGGACAGGGCTCTGGCAAAGCTGGGGATTGGC...CCTTGTTTTCCTGAGACCCCGTGTCTCATGTAGCCGAAGAGGACCTTGAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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3UTR CAA 72 bp | CTCCTGGTCTCCCAGGGCTGGGCAGTAATTAGTACCTaGTGCGTTTTTGACCCACAGCCTAGAGAAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: LLVSQGWAVIST*CVFDPQPREGS Trigger: GCTGCCTTCTCTAGGCTGTGGGTCAAAAACGCACAAGGTACTAATTACTGCCCAGCCCTGGGAGACCAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000230294.2 |
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CDS-3UTR TCA 90 bp | GCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTGACCTCCGGAGTTTCTCATaGGAAACAAAAGTGCTGGCC | + |
Preference number: 4 (lower is better) Translates to: AHRQLTGASWSHTTTLGDLRSFS*ETKVLA Trigger: GGCCAGCACTTTTGTTTCTCATGAGAAACTCCGGAG...GTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTTTAGAATGTTCCCATAAACACTCTGCACCTTGGTaGACAGGTCTGTCAGCTGCC | + |
Preference number: 4 (lower is better) Translates to: EGPGSHSFSPPPLECSHKHSAPW*TGLSAA Trigger: GGCAGCTGACAGACCTGTGCACCAAGGTGCAGAGTG...TTTATGGGAACATTCTAAAGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCACACATGGGTTTGTTAGGCTCAAGCTGTGAAGGAATGTCTATAGCTCCCAGGGGGTGGGTGCCACTCTaGACCTTGGTGCACAGGTCT | + |
Preference number: 4 (lower is better) Translates to: AHMGLLGSSCEGMSIAPRGWVPL*TLVHRS Trigger: AGACCTGTGCACCAAGGTGCAGAGTGGCACCCACCC...CCTGGGAGCTATAGACATTCCTTCACAGCTTGAGCCTAACAAACCCATGTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTTTAGAATGTTCCCATAAACTCAAGGCTCTCATCTaGGAGGCTTGGAGCTGGCTG | + |
Preference number: 4 (lower is better) Translates to: EGPGSHSFSPPPLECSHKLKALI*EAWSWL Trigger: CAGCCAGCTCCAAGCCTCGCAGATGAGAGCCTTGAG...TTTATGGGAACATTCTAAAGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | ACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACGATTTCACTTCCTGTaGAGTCAGCTGGCCAATCCC | + |
Preference number: 4 (lower is better) Translates to: TSGAHRQLTGASWSHTTTRFHFL*SQLANP Trigger: GGGATTGGCCAGCTGACTGCACAGGAAGTGAAATCG...TGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | GCACAAAGACTCGGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGTCCTGTGCAGTCAGCTaGCCAATCCCCAGCTTTGCC | + |
Preference number: 4 (lower is better) Translates to: AQRLGKKHSAKTTPQSFVSCAVS*PIPSFA Trigger: GGCAAAGCTGGGGATTGGCCAGCTGACTGCACAGGA...CACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACCGAGTCTTTGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | GGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTTGCCGTCTCAAGGTAGTTGGTaGAGAGCAGGACCACGTTGT | + |
Preference number: 4 (lower is better) Translates to: GKKHSAKTTPQSFVGSLPSQGSW*RAGPRC Trigger: ACAACGTGGTCCTGCTCTCCACCAACTACCTTGAGA...CGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | GGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGGGCTCCTTGCCGTTGTCTCAAGGTAGTTaGTGGAGAGCAGGACCACGT | + |
Preference number: 4 (lower is better) Translates to: GKKHSAKTTPQSFVGSLPLSQGS*WRAGPR Trigger: ACGTGGTCCTGCTCTCCACCAACTACCTTGAGACAA...CGGCAAGGAGCCCACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GCACACATGGGTTTGTTAGGCTCAAGCTGTGAAGGAATGTCTATAGCTCCCAGGAGCAGGACCACGTTGTaGAGCAAGAGGGACAGCTCG | + |
Preference number: 4 (lower is better) Translates to: AHMGLLGSSCEGMSIAPRSRTTL*SKRDSS Trigger: CGAGCTGTCCCTCTTGCTGCACAACGTGGTCCTGCT...CCTGGGAGCTATAGACATTCCTTCACAGCTTGAGCCTAACAAACCCATGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | CACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGGTTCAGTAGTTGGCAAAGGGTaGAATGGAGATGAGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: HTTTLGDCRTMPSFPWGSVVGKG*NGDEAN Trigger: GTTGGCCTCATCTCCATTCCACCCTTTGCCAACTAC...TGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000229648.2 |
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CDS-3UTR CCA 90 bp | ACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGGTTCACTCAGCGTAGTTGGCAAAGGGTaGAATGGAGATGAGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: TTLGDCRTMPSFPWGSLSVVGKG*NGDEAN Trigger: GTTGGCCTCATCTCCATTCCACCCTTTGCCAACTAC...GCTGAGTGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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CDS-3UTR CCA 90 bp | ACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACAGTAGTTGGCAAAGGGTaGAATGGAGATGAGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: TSGAHRQLTGASWSHTTTVVGKG*NGDEAN Trigger: GTTGGCCTCATCTCCATTCCACCCTTTGCCAACTAC...TGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 ENSMUST00000229648.2 |
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CDS-3UTR GCA 90 bp | ACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACATTGGGGGTCCAGAAATaGTTGACTAGCAGTTGCCTA | + |
Preference number: 4 (lower is better) Translates to: TSGAHRQLTGASWSHTTTLGVQK*LTSSCL Trigger: TAGGCAACTGCTAGTCAAGCATTTCTGGACCCCCAA...TGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | TCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCCATGAGAAACAAAAGTaGTGGCCCTTCTTAGATGTG | + |
Preference number: 4 (lower is better) Translates to: SHTSGAHRQLTGASWSHTHEKQK*WPFLDV Trigger: CACATCTAAGAAGGGCCAGCACTTTTGTTTCTCATG...GGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | GAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTTTAGAATGTTCCCATAAACGATTTCACTTCCTGTaGAGTCAGCTGGCCAATCCC | + |
Preference number: 4 (lower is better) Translates to: EGPGSHSFSPPPLECSHKRFHFL*SQLANP Trigger: GGGATTGGCCAGCTGACTGCACAGGAAGTGAAATCG...TTTATGGGAACATTCTAAAGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | AGGACGTCCTGTGCTGCTGGGTGGGTGCCACTCTGCACCTTGCAAGAAATGAGTAAAAGACCAGGTAGTTaGCAAAGGGTGGAATGGAGA | + |
Preference number: 4 (lower is better) Translates to: RTSCAAGWVPLCTLQEMSKRPGS*QRVEWR Trigger: TCTCCATTCCACCCTTTGCCAACTACCTGGTCTTTT...ACTCATTTCTTGCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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CDS-3UTR GCA 90 bp | GCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACACTAGGTGACTGCTTGACTAGCAGTTaGCTAGGAAACAGGTACATT | + |
Preference number: 4 (lower is better) Translates to: AHRQLTGASWSHTTTLGDCLTSS*LGNRYI Trigger: AATGTACCTGTTTCCTAGGCAACTGCTAGTCAAGCA...GTCACCTAGTGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 |
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CDS-3UTR CCA 90 bp | GCACACATGGGTTTGTTAGGCTCAAGCTGTGAAGGAATGTCTATAGCTCCCAGGTCTCAAGGTAGTTGGTaGAGAGCAGGACCACGTTGT | + |
Preference number: 4 (lower is better) Translates to: AHMGLLGSSCEGMSIAPRSQGSW*RAGPRC Trigger: ACAACGTGGTCCTGCTCTCCACCAACTACCTTGAGA...CCTGGGAGCTATAGACATTCCTTCACAGCTTGAGCCTAACAAACCCATGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | ACATGTAAGGTCCCTAGGGGCTGTGTGACAGCCTGGAAAGTAAGACACTGGGGACATGAGAAACAAAAGTaGTGGCCCTTCTTAGATGTG | + |
Preference number: 4 (lower is better) Translates to: TCKVPRGCVTAWKVRHWGHEKQK*WPFLDV Trigger: CACATCTAAGAAGGGCCAGCACTTTTGTTTCTCATG...TCCCCAGTGTCTTACTTTCCAGGCTGTCACACAGCCCCTAGGGACCTTACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR GCA 90 bp | TCCCAGGGCTGGGCAGTAATTAGTACCTTGTGCGTTTTTGACCCACAGCCTAGATGCTTGACTAGCAGTTaGCTAGGAAACAGGTACATT | + |
Preference number: 4 (lower is better) Translates to: SQGWAVISTLCVFDPQPRCLTSS*LGNRYI Trigger: AATGTACCTGTTTCCTAGGCAACTGCTAGTCAAGCA...TCTAGGCTGTGGGTCAAAAACGCACAAGGTACTAATTACTGCCCAGCCCTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037001.10 |
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CDS-3UTR TCA 90 bp | TCCCAGGGCTGGGCAGTAATTAGTACCTTGTGCGTTTTTGACCCACAGCCTAGATCTGTATTCCTTTCATaGAGGTTGTGTATAAGGCAT | + |
Preference number: 4 (lower is better) Translates to: SQGWAVISTLCVFDPQPRSVFLS*RLCIRH Trigger: ATGCCTTATACACAACCTTCATGAAAGGAATACAGA...TCTAGGCTGTGGGTCAAAAACGCACAAGGTACTAATTACTGCCCAGCCCTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037001.10 |
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CDS-3UTR CCA 90 bp | GACTTTATAGGACCTAAGTATTACATCACAATAAAAGTTCAGTACCAGAGATGCGTGATGACTTCCGAGTaGGACCGCCTCCGGAGACCA | + |
Preference number: 4 (lower is better) Translates to: DFIGPKYYITIKVQYQRCVMTSE*DRLRRP Trigger: TGGTCTCCGGAGGCGGTCCCACTCGGAAGTCATCAC...GCATCTCTGGTACTGAACTTTTATTGTGATGTAATACTTAGGTCCTATAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CCA 90 bp | GACTTTATAGGACCTAAGTATTACATCACAATAAAAGTTCAGTACCAGAGATGCCTCATCTGCGAGGCTTaGAGCTGGCTGAAGCCCAAG | + |
Preference number: 4 (lower is better) Translates to: DFIGPKYYITIKVQYQRCLICEA*SWLKPK Trigger: CTTGGGCTTCAGCCAGCTCCAAGCCTCGCAGATGAG...GCATCTCTGGTACTGAACTTTTATTGTGATGTAATACTTAGGTCCTATAAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR TCA 90 bp | GACTTTATAGGACCTAAGTATTACATCACAATAAAAGTTCAGTACCAGAGATGCCTCCGGAGTTTCTCATaGGAAACAAAAGTGCTGGCC | + |
Preference number: 4 (lower is better) Translates to: DFIGPKYYITIKVQYQRCLRSFS*ETKVLA Trigger: GGCCAGCACTTTTGTTTCTCATGAGAAACTCCGGAG...GCATCTCTGGTACTGAACTTTTATTGTGATGTAATACTTAGGTCCTATAAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS TCA 90 bp | GGGCTCGCCACGCAGGGCCAGAGCGGCCCAGCTGCAGCCTCCGGGTaGCAAAGGGTCCAGGGGCGACAGTCGAACCCCACAGAGCAGCCC | + |
Preference number: 5 (lower is better) Translates to: GLATQGQSGPAAASG*QRVQGRQSNPTEQP Trigger: GGGCTGCTCTGTGGGGTTCGACTGTCGCCCCTGGACCCTTTGTCACCCGGAGGCTGCAGCTGGGCCGCTCTGGCCCTGCGTGGCGAGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS GCA 90 bp | TTTGAAGACCGAGGGGCTCGCCACGCAGGGCCAGAGCGGCCCAGCTaGAGCCTCCGGGTGACAAAGGGTCCAGGGGCGACAGTCGAACCC | + |
Preference number: 5 (lower is better) Translates to: FEDRGARHAGPERPS*SLRVTKGPGATVEP Trigger: GGGTTCGACTGTCGCCCCTGGACCCTTTGTCACCCGGAGGCTGCAGCTGGGCCGCTCTGGCCCTGCGTGGCGAGCCCCTCGGTCTTCAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS-3UTR CAA 90 bp | TGGGCTCCTTGCCGGTGTTCCAGCGCCTGGGAGCTGGGGGTAGGAAGACCAGATGAGAAAGGTGAAGCTTaGAAGACCGAGGGGCTCGCC | + |
Preference number: 5 (lower is better) Translates to: WAPCRCSSAWELGVGRPDEKGEA*KTEGLA Trigger: GGCGAGCCCCTCGGTCTTCAAAGCTTCACCTTTCTC...ATCTGGTCTTCCTACCCCCAGCTCCCAGGCGCTGGAACACCGGCAAGGAGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS-3UTR CAA 90 bp | GCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACGGCCAATCCCCAGCTTaGCCAGAGCCCTGTCCAGCT | + |
Preference number: 5 (lower is better) Translates to: ASHTSGAHRQLTGASWSHGQSPA*PEPCPA Trigger: AGCTGGACAGGGCTCTGGCAAAGCTGGGGATTGGCC...GTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | GCAGCCGCAGCACCCGAGTCTGGAGAGAGAGGATCCCTTGAGCACAGGGATTGGGAGAGCAGGACCACGTaGTGCAGCAAGAGGGACAGC | + |
Preference number: 5 (lower is better) Translates to: AAAAPESGERGSLEHRDWESRTT*CSKRDS Trigger: GCTGTCCCTCTTGCTGCACAACGTGGTCCTGCTCTC...CCAATCCCTGTGCTCAAGGGATCCTCTCTCTCCAGACTCGGGTGCTGCGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | ACCCACTCCGCTGCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTCATCTGCGAGGCTaGGAGCTGGCTGAAGCCCAA | + |
Preference number: 5 (lower is better) Translates to: THSAASHTSGAHRQLTGASHLRG*ELAEAQ Trigger: TTGGGCTTCAGCCAGCTCCAAGCCTCGCAGATGAGA...AGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGCAGCGGAGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | GCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACGAGAGCAGGACCACGTaGTGCAGCAAGAGGGACAGC | + |
Preference number: 5 (lower is better) Translates to: ASHTSGAHRQLTGASWSHESRTT*CSKRDS Trigger: GCTGTCCCTCTTGCTGCACAACGTGGTCCTGCTCTC...GTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS TCA 90 bp | AGAAATCAAGTTCTTCACGTCCGCCTTCGGAGAAAGGTGAAGCTTTaGAGACCGAGGGGCTCGCCACGCAGGGCCAGAGCGGCCCAGCTG | + |
Preference number: 5 (lower is better) Translates to: RNQVLHVRLRRKVKL*RPRGSPRRARAAQL Trigger: CAGCTGGGCCGCTCTGGCCCTGCGTGGCGAGCCCCTCGGTCTTCAAAGCTTCACCTTTCTCCGAAGGCGGACGTGAAGAACTTGATTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS CCA 90 bp | GAGCCAGGACGTCCTGTGCTGCTGGGTGGGTGCCACTCTGCACCTTaGTGCACAGGTCTGTCAGCTGCCTCCGGAGTTTCTCATGAGAAA | + |
Preference number: 5 (lower is better) Translates to: EPGRPVLLGGCHSAP*CTGLSAASGVSHEK Trigger: TTTCTCATGAGAAACTCCGGAGGCAGCTGACAGACCTGTGCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | TCCGCTGCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCTCATCTGCGAGGCTaGGAGCTGGCTGAAGCCCAA | + |
Preference number: 5 (lower is better) Translates to: SAASHTSGAHRQLTGASWSHLRG*ELAEAQ Trigger: TTGGGCTTCAGCCAGCTCCAAGCCTCGCAGATGAGA...CCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGCAGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | GCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACTCTCATCTGCGAGGCTaGGAGCTGGCTGAAGCCCAA | + |
Preference number: 5 (lower is better) Translates to: ASHTSGAHRQLTGASWSHSHLRG*ELAEAQ Trigger: TTGGGCTTCAGCCAGCTCCAAGCCTCGCAGATGAGA...GTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS GCA 90 bp | CAAGGGGTAGGTAGAGAAGCAATCTCTGAGAGCCAGGACGTCCTGTaGTGCTGGGTGGGTGCCACTCTGCACCTTGGTGCACAGGTCTGT | + |
Preference number: 5 (lower is better) Translates to: QGVGREAISESQDVL*CWVGATLHLGAQVC Trigger: ACAGACCTGTGCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCTCTCAGAGATTGCTTCTCTACCTACCCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | CACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGGTTCAGGCCAATCCCCAGCTTaGCCAGAGCCCTGTCCAGCT | + |
Preference number: 5 (lower is better) Translates to: HTTTLGDCRTMPSFPWGSGQSPA*PEPCPA Trigger: AGCTGGACAGGGCTCTGGCAAAGCTGGGGATTGGCC...TGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | TGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGAGAGCAGGACCACGTaGTGCAGCAAGAGGGACAGC | + |
Preference number: 5 (lower is better) Translates to: WSHTTTLGDCRTMPSFPWESRTT*CSKRDS Trigger: GCTGTCCCTCTTGCTGCACAACGTGGTCCTGCTCTC...CCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | GCACAAAGACTCGGTAAAAAGCACTCAGCCAAGACAACACCCCAGAGCTTCGTGGGCCAATCCCCAGCTTaGCCAGAGCCCTGTCCAGCT | + |
Preference number: 5 (lower is better) Translates to: AQRLGKKHSAKTTPQSFVGQSPA*PEPCPA Trigger: AGCTGGACAGGGCTCTGGCAAAGCTGGGGATTGGCC...CACGAAGCTCTGGGGTGTTGTCTTGGCTGAGTGCTTTTTACCGAGTCTTTGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | GCTTCTTGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTGAGAAAGGTGAAGCTTaGAAGACCGAGGGGCTCGCC | + |
Preference number: 5 (lower is better) Translates to: ASWSHTTTLGDCRTMPSFEKGEA*KTEGLA Trigger: GGCGAGCCCCTCGGTCTTCAAAGCTTCACCTTTCTC...AAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS-3UTR CAA 90 bp | ACTGGGGACAAACGCAGGGAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTATTCTTCTAGCCTTTTaGCCATCAGCCCATAACATC | + |
Preference number: 5 (lower is better) Translates to: TGDKRREGPGSHSFSPPPILLAF*PSAHNI Trigger: GATGTTATGGGCTGATGGCAAAAAGGCTAGAAGAAT...AGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTCCCTGCGTTTGTCCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037001.10 |
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CDS-3UTR CAA 90 bp | ACCCACTCCGCTGCCTCCCACACTAGTGGTGCGCACAGACAGCTGACAGGTGCTATTCTTCTAGCCTTTTaGCCATCAGCCCATAACATC | + |
Preference number: 5 (lower is better) Translates to: THSAASHTSGAHRQLTGAILLAF*PSAHNI Trigger: GATGTTATGGGCTGATGGCAAAAAGGCTAGAAGAAT...AGCACCTGTCAGCTGTCTGTGCGCACCACTAGTGTGGGAGGCAGCGGAGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 |
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CDS TCA 90 bp | GAGGCCAACGAAGAGACACTTGGTGATATCTCGTCGGAACTTTCATaGAGGTTGTGTATAAGGCATAGAAGCGGGGGAAATGACGCCCCA | + |
Preference number: 5 (lower is better) Translates to: EANEETLGDISSELS*RLCIRHRSGGNDAP Trigger: TGGGGCGTCATTTCCCCCGCTTCTATGCCTTATACACAACCTTCATGAAAGTTCCGACGAGATATCACCAAGTGTCTCTTCGTTGGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |
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CDS-3UTR CAA 90 bp | ACTAGTGGTGCGCACAGACAGCTGACAGGTGCTTCTTGGTCCCACACCACTACAGTCCAAGAAATCAATTaGTTGTTTGGGGGTCCAGAA | + |
Preference number: 5 (lower is better) Translates to: TSGAHRQLTGASWSHTTTVQEIN*LFGGPE Trigger: TTCTGGACCCCCAAACAACAAATTGATTTCTTGGAC...TGTAGTGGTGTGGGACCAAGAAGCACCTGTCAGCTGTCTGTGCGCACCACTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | CACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTCCGTGGGGTTCAGTCCAAGAAATCAATTaGTTGTTTGGGGGTCCAGAA | + |
Preference number: 5 (lower is better) Translates to: HTTTLGDCRTMPSFPWGSVQEIN*LFGGPE Trigger: TTCTGGACCCCCAAACAACAAATTGATTTCTTGGAC...TGAACCCCACGGAAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | GCTTCTTGGTCCCACACCACTACACTAGGTGACTGCAGGACAATGCCGTCCTTTGTCCAAGAAATCAATTaGTTGTTTGGGGGTCCAGAA | + |
Preference number: 5 (lower is better) Translates to: ASWSHTTTLGDCRTMPSFVQEIN*LFGGPE Trigger: TTCTGGACCCCCAAACAACAAATTGATTTCTTGGAC...AAAGGACGGCATTGTCCTGCAGTCACCTAGTGTAGTGGTGTGGGACCAAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS-3UTR CAA 90 bp | GAGGGGCCAGGCAGCCATTCTTTCTCACCGCCTCCTTTAGAATGTTCCCATAAACAAGAAATCAATTTGTaGTTTGGGGGTCCAGAAATG | + |
Preference number: 5 (lower is better) Translates to: EGPGSHSFSPPPLECSHKQEINL*FGGPEM Trigger: CATTTCTGGACCCCCAAACAACAAATTGATTTCTTG...TTTATGGGAACATTCTAAAGGAGGCGGTGAGAAAGAATGGCTGCCTGGCCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000230294.2 |
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CDS GCA 72 bp | CGAGGGGCTCGCCACGCAGGGCCAGAGCGGCCCAGCTaGAGCCTCCGGGTGACAAAGGGTCCAGGGGCGACA | + |
Preference number: 6 (lower is better) Translates to: RGARHAGPERPS*SLRVTKGPGAT Trigger: TGTCGCCCCTGGACCCTTTGTCACCCGGAGGCTGCAGCTGGGCCGCTCTGGCCCTGCGTGGCGAGCCCCTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS TCA 72 bp | GTTCTTCACGTCCGCCTTCGGAGAAAGGTGAAGCTTTaGAGACCGAGGGGCTCGCCACGCAGGGCCAGAGCG | + |
Preference number: 6 (lower is better) Translates to: VLHVRLRRKVKL*RPRGSPRRARA Trigger: CGCTCTGGCCCTGCGTGGCGAGCCCCTCGGTCTTCAAAGCTTCACCTTTCTCCGAAGGCGGACGTGAAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS CCA 72 bp | CGTCCTGTGCTGCTGGGTGGGTGCCACTCTGCACCTTaGTGCACAGGTCTGTCAGCTGCCTCCGGAGTTTCT | + |
Preference number: 6 (lower is better) Translates to: RPVLLGGCHSAP*CTGLSAASGVS Trigger: AGAAACTCCGGAGGCAGCTGACAGACCTGTGCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS CAA 72 bp | ACGTCCTGTGCTGCTGGGTGGGTGCCACTCTGCACCTaGGTGCACAGGTCTGTCAGCTGCCTCCGGAGTTTC | + |
Preference number: 6 (lower is better) Translates to: TSCAAGWVPLCT*VHRSVSCLRSF Trigger: GAAACTCCGGAGGCAGCTGACAGACCTGTGCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS CCA 72 bp | CAATCTCTGAGAGCCAGGACGTCCTGTGCTGCTGGGTaGGTGCCACTCTGCACCTTGGTGCACAGGTCTGTC | + |
Preference number: 6 (lower is better) Translates to: QSLRARTSCAAG*VPLCTLVHRSV Trigger: GACAGACCTGTGCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCTCTCAGAGATTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS CCA 72 bp | GAAGCAATCTCTGAGAGCCAGGACGTCCTGTGCTGCTaGGTGGGTGCCACTCTGCACCTTGGTGCACAGGTC | + |
Preference number: 6 (lower is better) Translates to: EAISESQDVLCC*VGATLHLGAQV Trigger: GACCTGTGCACCAAGGTGCAGAGTGGCACCCACCCAGCAGCACAGGACGTCCTGGCTCTCAGAGATTGCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 ENSMUST00000230294.2 |
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CDS CAA 72 bp | AGTTCTTCACGTCCGCCTTCGGAGAAAGGTGAAGCTTaGAAGACCGAGGGGCTCGCCACGCAGGGCCAGAGC | + |
Preference number: 6 (lower is better) Translates to: SSSRPPSEKGEA*KTEGLATQGQS Trigger: GCTCTGGCCCTGCGTGGCGAGCCCCTCGGTCTTCAAAGCTTCACCTTTCTCCGAAGGCGGACGTGAAGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS CAA 90 bp | AAGAAATCAAGTTCTTCACGTCCGCCTTCGGAGAAAGGTGAAGCTTaGAAGACCGAGGGGCTCGCCACGCAGGGCCAGAGCGGCCCAGCT | + |
Preference number: 6 (lower is better) Translates to: KKSSSSRPPSEKGEA*KTEGLATQGQSGPA Trigger: AGCTGGGCCGCTCTGGCCCTGCGTGGCGAGCCCCTCGGTCTTCAAAGCTTCACCTTTCTCCGAAGGCGGACGTGAAGAACTTGATTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS TCA 72 bp | GAAATCAAGTTCTTCACGTCCGCCTTCGGAGAAAGGTaGAGCTTTGAAGACCGAGGGGCTCGCCACGCAGGG | + |
Preference number: 6 (lower is better) Translates to: EIKFFTSAFGER*SFEDRGARHAG Trigger: CCCTGCGTGGCGAGCCCCTCGGTCTTCAAAGCTTCACCTTTCTCCGAAGGCGGACGTGAAGAACTTGATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229012.2 |
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CDS GCA 72 bp | TGTTGTTTGGGGGTCCAGAAATGCTTGACTAGCAGTTaGCTAGGAAACAGGTACATTAGCAAAAAGACCAGG | + |
Preference number: 6 (lower is better) Translates to: CCLGVQKCLTSS*LGNRYISKKTR Trigger: CCTGGTCTTTTTGCTAATGTACCTGTTTCCTAGGCAACTGCTAGTCAAGCATTTCTGGACCCCCAAACAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037001.10 ENSMUST00000229648.2 |
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CDS TCA 72 bp | GAAGAGACACTTGGTGATATCTCGTCGGAACTTTCATaGAGGTTGTGTATAAGGCATAGAAGCGGGGGAAAT | + |
Preference number: 6 (lower is better) Translates to: EETLGDISSELS*RLCIRHRSGGN Trigger: ATTTCCCCCGCTTCTATGCCTTATACACAACCTTCATGAAAGTTCCGACGAGATATCACCAAGTGTCTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229012.2 |