Pregenerated sensors for LETM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037363Ensembl transcript IDs: ENSMUST00000079160.8, ENSMUST00000210234.2, ENSMUST00000210616.2, ENSMUST00000210810.2, ENSMUST00000211422.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCTGGGAGGATCTATACAGATCCTTGCTAGATCCCTTGCTTAGATaGTCAAGGCCCTGGGTCCCAACCCCAGCAATGGCAGGAAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: RWEDLYRSLLDPLLR*SRPWVPTPAMAGSF Trigger: AAAGCTTCCTGCCATTGCTGGGGTTGGGACCCAGGGCCTTGAGCATCTAAGCAAGGGATCTAGCAAGGATCTGTATAGATCCTCCCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CCA 90 bp | GGGGCTGGGAGGATATATATATACACACATCCTGCTAGATCCCGCTaGGAGGATCTATACAGATCCTTGCTAGATCCCTTGCTTAGATGC | + |
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Preference number: 1 (lower is better) Translates to: GAGRIYIYTHPARSR*EDLYRSLLDPLLRC Trigger: GCATCTAAGCAAGGGATCTAGCAAGGATCTGTATAGATCCTCCCAGCGGGATCTAGCAGGATGTGTGTATATATATATCCTCCCAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR TCA 90 bp | CTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTaGTCCTTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LASLGWSQGLQRLNG*SFISSQTVLAGIPL Trigger: CAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| 3UTR GCA 90 bp | ACAGCTGAAGAGACAAACGCACAGCAATGTTATATATGCAGGTTATaGCCCAACCGAACCATCCAAGACCCACTGCCAAAACAAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: TAEETNAQQCYICRL*PNRTIQDPLPKQSL Trigger: CAGGCTTTGTTTTGGCAGTGGGTCTTGGATGGTTCGGTTGGGGCATAACCTGCATATATAACATTGCTGTGCGTTTGTCTCTTCAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CCA 90 bp | CAAGACCTTGAGAAGATTAAAAACACAATTATAGGACTGGAGAGATaGCTCAGAAGAGCACAGGACAGGAGTTCGGTTCCCAGCACCCAC | + |
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Preference number: 1 (lower is better) Translates to: QDLEKIKNTIIGLER*LRRAQDRSSVPSTH Trigger: GTGGGTGCTGGGAACCGAACTCCTGTCCTGTGCTCTTCTGAGCCATCTCTCCAGTCCTATAATTGTGTTTTTAATCTTCTCAAGGTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CAA 90 bp | GCTAGATCCCGCTGGGAGGATCTATACAGATCCTTGCTAGATCCCTaGCTTAGATGCTCAAGGCCCTGGGTCCCAACCCCAGCAATGGCA | + |
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Preference number: 2 (lower is better) Translates to: ARSRWEDLYRSLLDP*LRCSRPWVPTPAMA Trigger: TGCCATTGCTGGGGTTGGGACCCAGGGCCTTGAGCATCTAAGCAAGGGATCTAGCAAGGATCTGTATAGATCCTCCCAGCGGGATCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR GCA 90 bp | GAGATGGCTCAGAAGAGCACAGGACAGGAGTTCGGTTCCCAGCACCCACGTCAGGATGCCTCTGGCTTCTaGAGATGCCTACACTCACAT | + |
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Preference number: 2 (lower is better) Translates to: EMAQKSTGQEFGSQHPRQDASGF*RCLHSH Trigger: ATGTGAGTGTAGGCATCTGCAGAAGCCAGAGGCATC...CTGACGTGGGTGCTGGGAACCGAACTCCTGTCCTGTGCTCTTCTGAGCCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGAAACATCTGTAGTCACCAGACTGAAAGAGAGACACAGCAGATACAAAAGGCTGGCCTCGCACTaGCTCTGCTTCAGTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: QRETSVVTRLKERHSRYKRLASH*LCFSAG Trigger: CCCTGCACTGAAGCAGAGGCAGTGCGAGGCCAGCCT...TTTGTATCTGCTGTGTCTCTCTTTCAGTCTGGTGACTACAGATGTTTCCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGAAACATCTGTAGTCACCAGACTGAAAGAGAGACACAGCAGATACAAACCTGGGCTCAACTGCTaGTCCTGCCTCAGTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: QRETSVVTRLKERHSRYKPGLNC*SCLSVL Trigger: GAGGACACTGAGGCAGGAGCAGCAGTTGAGCCCAGG...TTTGTATCTGCTGTGTCTCTCTTTCAGTCTGGTGACTACAGATGTTTCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR CCA 90 bp | CTAAATGGCCTGAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCCAGACAGTCTTAGCTaGAATTCCTTTGTGGACGCC | + |
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Preference number: 2 (lower is better) Translates to: LNGLNLVSLLASLGWSQGPDSLS*NSFVDA Trigger: GGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGG...GCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTCAGGCCATTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| 3UTR-3UTR CCA 90 bp | TCAACAGCAAACCCACAGGCTGTGAGAGCTGAATATGTGGAATATGGCAACTCTAGATGCTCAAGGCCCTaGGTCCCAACCCCAGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: STANPQAVRAEYVEYGNSRCSRP*VPTPAM Trigger: CATTGCTGGGGTTGGGACCCAGGGCCTTGAGCATCT...AGAGTTGCCATATTCCACATATTCAGCTCTCACAGCCTGTGGGTTTGCTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CAA 90 bp | CCCAACCGAACCATCCAAGACCCACTGCCAAAACAAAGCCTGCCTTaGTCTCAGAGTGTGGAAACACTAAGGTTTCCACAGCTGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: PNRTIQDPLPKQSLP*SQSVETLRFPQLET Trigger: TGTTTCCAGCTGTGGAAACCTTAGTGTTTCCACACTCTGAGACAAAGGCAGGCTTTGTTTTGGCAGTGGGTCTTGGATGGTTCGGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR GCA 90 bp | ATTATGAACACCATAAATGGAACCAAGCGGAAGACATCGGCACACGTTCTCAACACTCCTGGGCTCAACTaGTGCTCCTGCCTCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: IMNTINGTKRKTSAHVLNTPGLN*CSCLSV Trigger: GACACTGAGGCAGGAGCAGCAGTTGAGCCCAGGAGT...GTTGAGAACGTGTGCCGATGTCTTCCGCTTGGTTCCATTTATGGTGTTCATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGACAAACGCACAGCAATGTTATATATGCAGGTTATGCCCCAACCGAACCATTCTGGCTTCTGCAGATaGCTACACTCACATGCACAC | + |
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Preference number: 2 (lower is better) Translates to: RDKRTAMLYMQVMPQPNHSGFCR*LHSHAH Trigger: GTGTGCATGTGAGTGTAGGCATCTGCAGAAGCCAGA...ATGGTTCGGTTGGGGCATAACCTGCATATATAACATTGCTGTGCGTTTGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR GCA 90 bp | TCAACAGCAAACCCACAGGCTGTGAGAGCTGAATATGTGGAATATGGCAACTCTTGCCAAAACAAAGCCTaGCTTTGTCTCAGAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: STANPQAVRAEYVEYGNSCQNKA*LCLRVW Trigger: CCACACTCTGAGACAAAGGCAGGCTTTGTTTTGGCA...AGAGTTGCCATATTCCACATATTCAGCTCTCACAGCCTGTGGGTTTGCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR CCA 90 bp | ATTATGAACACCATAAATGGAACCAAGCGGAAGACATCGGCACACGTTCTCAACTCCCAACCCCAGCAATaGCAGGAAGCTTTGGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: IMNTINGTKRKTSAHVLNSQPQQ*QEALVS Trigger: AGAAACCAAAGCTTCCTGCCATTGCTGGGGTTGGGA...GTTGAGAACGTGTGCCGATGTCTTCCGCTTGGTTCCATTTATGGTGTTCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAAACGCACAGCAATGTTATATATGCAGGTTATGCCCCAACCGAACCATCAGATCAGATGCCTCTaGCTTCTGCAGATGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: RDKRTAMLYMQVMPQPNHQIRCL*LLQMPT Trigger: TGTAGGCATCTGCAGAAGCCAGAGGCATCTGATCTG...ATGGTTCGGTTGGGGCATAACCTGCATATATAACATTGCTGTGCGTTTGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAAACGCACAGCAATGTTATATATGCAGGTTATGCCCCAACCGAACCATATAGGACTGGAGAGATaGCTCAGAAGAGCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: RDKRTAMLYMQVMPQPNHIGLER*LRRAQD Trigger: GTCCTGTGCTCTTCTGAGCCATCTCTCCAGTCCTAT...ATGGTTCGGTTGGGGCATAACCTGCATATATAACATTGCTGTGCGTTTGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAAACGCACAGCAATGTTATATATGCAGGTTATGCCCCAACCGAACCATCAGGTTCCCAGGGGCTaGGAGGATATATATATACAC | + |
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Preference number: 2 (lower is better) Translates to: RDKRTAMLYMQVMPQPNHQVPRG*EDIYIH Trigger: GTGTATATATATATCCTCCCAGCCCCTGGGAACCTG...ATGGTTCGGTTGGGGCATAACCTGCATATATAACATTGCTGTGCGTTTGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGGAAACATCTGTAGTCACCAGACTGAAAGAGAGACACAGCAGATACAAAATGCTCTACTGCATTTaGCTTAAAAACGTACACACG | + |
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Preference number: 2 (lower is better) Translates to: QRETSVVTRLKERHSRYKMLYCI*LKNVHT Trigger: CGTGTGTACGTTTTTAAGCCAAATGCAGTAGAGCAT...TTTGTATCTGCTGTGTCTCTCTTTCAGTCTGGTGACTACAGATGTTTCCCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR GCA 72 bp | ACCTGGCTGTTGACCAGGCTGGCCTCGCACTGCCTCTaGTTCAGTGCAGGGATTAAAGATACGTGCCACCAC | + |
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Preference number: 3 (lower is better) Translates to: TWLLTRLASHCL*FSAGIKDTCHH Trigger: GTGGTGGCACGTATCTTTAATCCCTGCACTGAAGCAGAGGCAGTGCGAGGCCAGCCTGGTCAACAGCCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR GCA 72 bp | TGGCTGACCTGGCTGTTGACCAGGCTGGCCTCGCACTaGCTCTGCTTCAGTGCAGGGATTAAAGATACGTGC | + |
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Preference number: 3 (lower is better) Translates to: WLTWLLTRLASH*LCFSAGIKDTC Trigger: GCACGTATCTTTAATCCCTGCACTGAAGCAGAGGCAGTGCGAGGCCAGCCTGGTCAACAGCCAGGTCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CCA 72 bp | TCCTTGCTAGATCCCTTGCTTAGATGCTCAAGGCCCTaGGTCCCAACCCCAGCAATGGCAGGAAGCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: SLLDPLLRCSRP*VPTPAMAGSFG Trigger: ACCAAAGCTTCCTGCCATTGCTGGGGTTGGGACCCAGGGCCTTGAGCATCTAAGCAAGGGATCTAGCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR CAA 90 bp | CAGAGGGAAACATCTGTAGTCACCAGACTGAAAGAGAGACACAGCAGATACAAATGGCTGACCTGGCTGTaGACCAGGCTGGCCTCGCAC | + |
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Preference number: 3 (lower is better) Translates to: QRETSVVTRLKERHSRYKWLTWL*TRLASH Trigger: GTGCGAGGCCAGCCTGGTCAACAGCCAGGTCAGCCA...TTTGTATCTGCTGTGTCTCTCTTTCAGTCTGGTGACTACAGATGTTTCCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CCA 72 bp | ATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTaGACGCCACTGCTGAGCGGAGTGACTGAAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: ISSQTVLAGIPL*TPLLSGVTEER Trigger: CCTCTCTTCAGTCACTCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| 3UTR-3UTR CAA 90 bp | GAGATGGCTCAGAAGAGCACAGGACAGGAGTTCGGTTCCCAGCACCCACGTCAGGATCTATACAGATCCTaGCTAGATCCCTTGCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: EMAQKSTGQEFGSQHPRQDLYRS*LDPLLR Trigger: TCTAAGCAAGGGATCTAGCAAGGATCTGTATAGATC...CTGACGTGGGTGCTGGGAACCGAACTCCTGTCCTGTGCTCTTCTGAGCCATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CCA 72 bp | TGGCTGATCCTTTATCTCAAGCCAGACAGTCTTAGCTaGAATTCCTTTGTGGACGCCACTGCTGAGCGGAGT | + |
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Preference number: 3 (lower is better) Translates to: WLILYLKPDSLS*NSFVDATAERS Trigger: ACTCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| 3UTR TCA 72 bp | CTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTaGTCCTTTATCTCAAGCCAGACAGTCTTAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LGWSQGLQRLNG*SFISSQTVLAG Trigger: TCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| 3UTR GCA 72 bp | ATTATAGTTTCTACTTTAGGAGAGCGGGGAGTGCTCTaGATCAACCTCAGGGCCTACAGCATGCTAAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: IIVSTLGERGVL*INLRAYSMLRK Trigger: CTTCCTTAGCATGCTGTAGGCCCTGAGGTTGATGCAGAGCACTCCCCGCTCTCCTAAAGTAGAAACTATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR-3UTR CAA 90 bp | AACAGTGAGACTATTGCATGTGACCCTGTGATGGTGGACCGGGAGGTCCTCAGAATTCACTTTCAAAAGTaGATGGCAACATGTCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: NSETIACDPVMVDREVLRIHFQK*MATCLG Trigger: TCCCAGACATGTTGCCATCAACTTTTGAAAGTGAAT...TCTGAGGACCTCCCGGTCCACCATCACAGGGTCACATGCAATAGTCTCACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR GCA 72 bp | GAGACAAACGCACAGCAATGTTATATATGCAGGTTATaGCCCAACCGAACCATCCAAGACCCACTGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: ETNAQQCYICRL*PNRTIQDPLPK Trigger: TTTTGGCAGTGGGTCTTGGATGGTTCGGTTGGGGCATAACCTGCATATATAACATTGCTGTGCGTTTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR GCA 72 bp | ACAGCTGAAGAGACAAACGCACAGCAATGTTATATATaGAGGTTATGCCCCAACCGAACCATCCAAGACCCA | + |
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Preference number: 3 (lower is better) Translates to: TAEETNAQQCYI*RLCPNRTIQDP Trigger: TGGGTCTTGGATGGTTCGGTTGGGGCATAACCTGCATATATAACATTGCTGTGCGTTTGTCTCTTCAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CCA 72 bp | GAGAAGATTAAAAACACAATTATAGGACTGGAGAGATaGCTCAGAAGAGCACAGGACAGGAGTTCGGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: EKIKNTIIGLER*LRRAQDRSSVP Trigger: GGGAACCGAACTCCTGTCCTGTGCTCTTCTGAGCCATCTCTCCAGTCCTATAATTGTGTTTTTAATCTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CCA 72 bp | AGGATATATATATACACACATCCTGCTAGATCCCGCTaGGAGGATCTATACAGATCCTTGCTAGATCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: RIYIYTHPARSR*EDLYRSLLDPL Trigger: CAAGGGATCTAGCAAGGATCTGTATAGATCCTCCCAGCGGGATCTAGCAGGATGTGTGTATATATATATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR GCA 72 bp | AGTGGAAGAATTCAGTCTGAAGTGTGTGATTCCAATTaGTTGGCATTCTGGGAAAGACAAAACTACAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: SGRIQSEVCDSN*LAFWERQNYRG Trigger: CCCTCTGTAGTTTTGTCTTTCCCAGAATGCCAAGCAATTGGAATCACACACTTCAGACTGAATTCTTCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR GCA 72 bp | AGCCATCTCTCTAGTCCCTCATGGGAGAACTGTAATTaGATATTGCTAAGTGGAAGAATTCAGTCTGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SHLSSPSWENCN*ILLSGRIQSEV Trigger: CACTTCAGACTGAATTCTTCCACTTAGCAATATGCAATTACAGTTCTCCCATGAGGGACTAGAGAGATGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| 3UTR CCA 72 bp | GAAGAATTCAGTCTGAAGTGTGTGATTCCAATTGCTTaGCATTCTGGGAAAGACAAAACTACAGAGGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: EEFSLKCVIPIA*HSGKDKTTEGN Trigger: GTTTCCCTCTGTAGTTTTGTCTTTCCCAGAATGCCAAGCAATTGGAATCACACACTTCAGACTGAATTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| CDS-3UTR GCA 90 bp | TGGCCTGAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAAGCTGCTGGCACAGTTaGTCCTCAGTGAGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: WPELGVTACISGMVTRPPSCWHS*SSVRPS Trigger: GCTGGGCCTCACTGAGGAGCAACTGTGCCAGCAGCT...TGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTCAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS-3UTR CCA 90 bp | TCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGACACAGGGCAACCAGCTaGGGCCGGTCTAAGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SSQTVLAGIPLWTPLLSGHRATS*GRSKCS Trigger: GGAACACTTAGACCGGCCCCAGCTGGTTGCCCTGTG...TCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS-3UTR CCA 90 bp | TGGCCTGAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCACACCCTGTGAGCTGCTaGCACAGTTGCTCCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: WPELGVTACISGMVTRPPHPVSC*HSCSSV Trigger: CACTGAGGAGCAACTGTGCCAGCAGCTCACAGGGTG...TGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS-3UTR TCA 90 bp | AGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGAGTGTTGCTGCTGGTGCTATaGGTGATGACGGTACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SQTVLAGIPLWTPLLSGVLLLVL*VMTVLG Trigger: CCCCAGTACCGTCATCACTCATAGCACCAGCAGCAA...CACTCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS-3UTR TCA 90 bp | TCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGAAGCCTTGCTGTTCTGTaGGGTCTCCTGGGACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSQTVLAGIPLWTPLLSGSLAVL*GLLGLG Trigger: GCCAAGTCCCAGGAGACCTCACAGAACAGCAAGGCT...TCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS-3UTR GCA 90 bp | TGGCCTGAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAGCTCCAGCTGAGGTTTaGCAGGGACATGTTGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: WPELGVTACISGMVTRPPAPAEV*QGHVVA Trigger: GGCTACAACATGTCCCTGGCAAACCTCAGCTGGAGC...TGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTCAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| 3UTR CAA 72 bp | CGCTGGGAGGATCTATACAGATCCTTGCTAGATCCCTaGCTTAGATGCTCAAGGCCCTGGGTCCCAACCCCA | + |
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Preference number: 4 (lower is better) Translates to: RWEDLYRSLLDP*LRCSRPWVPTP Trigger: TGGGGTTGGGACCCAGGGCCTTGAGCATCTAAGCAAGGGATCTAGCAAGGATCTGTATAGATCCTCCCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| CDS-3UTR TCA 90 bp | CTTAGATGCTCAAGGCCCTGGGTCCCAACCCCAGCAATGGCAGGAAGCTTTGGTGCAAGTGATGGGAAATaGGAGCAGGAAGGGTACACA | + |
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Preference number: 4 (lower is better) Translates to: LRCSRPWVPTPAMAGSFGASDGK*EQEGYT Trigger: TGTGTACCCTTCCTGCTCTCATTTCCCATCACTTGC...ACCAAAGCTTCCTGCCATTGCTGGGGTTGGGACCCAGGGCCTTGAGCATCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| CDS-3UTR GCA 90 bp | GAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTGGAAAGCTGGGAAGATaGATCTCCCAGCTTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: ELGVTACISGMVTRPPTTGKLGR*ISQLRS Trigger: CGAGCGAAGCTGGGAGATGCATCTTCCCAGCTTTCC...AGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS-3UTR CCA 90 bp | TCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGAAGGGCTTGCTGCCTTTaGCTTCCCTGTTTGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSQTVLAGIPLWTPLLSGRACCL*LPCLLQ Trigger: CTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCT...TCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS-3UTR CCA 90 bp | AACAGTGAGACTATTGCATGTGACCCTGTGATGGTGGACCGGGAGGTCCTCAGAAGGGCTTGCTGCCTTTaGCTTCCCTGTTTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSETIACDPVMVDREVLRRACCL*LPCLLQ Trigger: CTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCT...TCTGAGGACCTCCCGGTCCACCATCACAGGGTCACATGCAATAGTCTCACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| 3UTR CAA 72 bp | CCTGCTAGATCCCGCTGGGAGGATCTATACAGATCCTaGCTAGATCCCTTGCTTAGATGCTCAAGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PARSRWEDLYRS*LDPLLRCSRPW Trigger: CCAGGGCCTTGAGCATCTAAGCAAGGGATCTAGCAAGGATCTGTATAGATCCTCCCAGCGGGATCTAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGCCTGTTTGCTCCAGCTaGGGTTTGCCAGGGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: WCHCLHLWDGHKASNDLMPVCSS*GLPGTC Trigger: ACATGTCCCTGGCAAACCTCAGCTGGAGCAAACAGG...CATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTGATCCTTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGGTCCAGCCACCCTGTaGGCTGCTGGCACAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLILYLKPDSLSWNSFVDGPATL*AAGTVA Trigger: AGCAACTGTGCCAGCAGCTCACAGGGTGGCTGGACC...GTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR TCA 90 bp | TGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTTTCGTTCCCTTCAGCTaGGGTGCAGAGTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CHCLHLWDGHKASNDLMAFVPFS*GAESVR Trigger: CCTCACAGACTCTGCACCTCAGCTGAAGGGAACGAA...AGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCGAAGGGTACACAGAATaGCCAGGCAGTCTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLASLGWSQGLQRLNGEGYTE*PGSLVQ Trigger: CTGGACAAGACTGCCTGGCCATTCTGTGTACCCTTC...GCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGAGCAAGTGATGGGAAATaGGAGCAGGAAGGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: SSQTVLAGIPLWTPLLSGASDGK*EQEGYT Trigger: TGTGTACCCTTCCTGCTCTCATTTCCCATCACTTGC...TCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | TTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCCACCCTGTGAGCTaGTGGCACAGTTGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FISSQTVLAGIPLWTPLLSHPVS*WHSCSS Trigger: TGAGGAGCAACTGTGCCAGCAGCTCACAGGGTGGCT...CAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAAGTGTCATCAGGAGCTaGAAGCGGAGCAGATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPELGVTACISGMVTRPPSVIRS*KRSRLF Trigger: AAACAATCTGCTCCGCTTCCAGCTCCTGATGACACT...TGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTCAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATTTCTGTGAGGTCTCCTaGGACTTGGCCTGGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: HCLHLWDGHKASNDLMADFCEVS*DLAWRI Trigger: AATCCTCCAGGCCAAGTCCCAGGAGACCTCACAGAA...ATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | AGTCACATGTACCACACGGATGCAAGTTGTTATCAACAGCAAACCCACAGGCTGGCTCCAGCTGAGGTTTaGCAGGGACATGTTGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHMYHTDASCYQQQTHRLAPAEV*QGHVVA Trigger: GGCTACAACATGTCCCTGGCAAACCTCAGCTGGAGC...CAGCCTGTGGGTTTGCTGTTGATAACAACTTGCATCCGTGTGGTACATGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR GCA 90 bp | TTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGGCTGAGGGCTTGCTaGCTTTGGCTTCCCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FISSQTVLAGIPLWTPLLRLRAC*LWLPCL Trigger: CAAACAGGGAAGCCAAAGGCAGCAAGCCCTCAGCCT...CAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGCTATCAGGTAGAAGGTaGGCGACAGGAGCAAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WCHCLHLWDGHKASNDLMLSGRR*ATGAKE Trigger: CTCTTTTGCTCCTGTCGCGCACCTTCTACCTGATAG...CATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGACTTTGGAATCAGCCTTaGTGTTCTGTGAGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSQTVLAGIPLWTPLLSGLWNQP*CSVRSP Trigger: AGGAGACCTCACAGAACAGCAAGGCTGATTCCAAAG...TCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATCCTTTATCTCAAACGTTCTCCTTCAAGTaGAGGTCCAGCCACCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWDGHKASNDLMADPLSQTFSFK*RSSHPV Trigger: CACAGGGTGGCTGGACCTCCACTTGAAGGAGAACGT...TTGAGATAAAGGATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR TCA 90 bp | TGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGTGGAGAAATGCAAGTaGTGGGAAATGAGAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CHCLHLWDGHKASNDLMAVEKCK*WEMRAG Trigger: TCCTGCTCTCATTTCCCATCACTTGCATTTCTCCAC...AGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGAGTGCTGGTCCGTAAGGGATaGACTTTATTATTGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQTVLAGIPLWTPLLSGVLVRKG*TLLLPV Trigger: AACAGGCAATAATAAAGTCCATCCCTTACGGACCAG...CACTCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| 3UTR CAA 72 bp | TTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTaGTGGACGCCACTGCTGAGCGGAGTGACTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FISSQTVLAGIP*WTPLLSGVTEE Trigger: CTCTTCAGTCACTCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCCTCTGCTTCAGTGCAGGGATTAAAGATACGTGCCACCACTACCTGGCTTGTTAGCGCATTACCATaGAGTAGCCTCCACACTATT | + |
|
Preference number: 4 (lower is better) Translates to: TASASVQGLKIRATTTWLVSALP*SSLHTI Trigger: AATAGTGTGGAGGCTACTGCATGGTAATGCGCTAAC...AAGCCAGGTAGTGGTGGCACGTATCTTTAATCCCTGCACTGAAGCAGAGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR CCA 90 bp | TCAACAGCAAACCCACAGGCTGTGAGAGCTGAATATGTGGAATATGGCAACTCTGAAGGGTACACAGAATaGCCAGGCAGTCTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STANPQAVRAEYVEYGNSEGYTE*PGSLVQ Trigger: CTGGACAAGACTGCCTGGCCATTCTGTGTACCCTTC...AGAGTTGCCATATTCCACATATTCAGCTCTCACAGCCTGTGGGTTTGCTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR CCA 90 bp | CACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATACGCAAGTGAGAATCTaGCAAGTGGAGAAATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCLHLWDGHKASNDLMADTQVRI*QVEKCK Trigger: CTTGCATTTCTCCACTTGCCAGATTCTCACTTGCGT...ATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATTATTGCCTGTTAGACTaGGATAGGAGTACTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCLHLWDGHKASNDLMADYCLLD*DRSTSC Trigger: GCAGGAAGTACTCCTATCCCAGTCTAACAGGCAATA...ATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGAGTGTATGAACACCATAAATaGAACCAAGCGGAAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: SQTVLAGIPLWTPLLSGVYEHHK*NQAEDI Trigger: GATGTCTTCCGCTTGGTTCCATTTATGGTGTTCATA...CACTCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | CTAAATGGCCTGAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCTCCAAGGTTTGGCTTTaGAGTCTCTATATTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNGLNLVSLLASLGWSQGSKVWL*SLYIRW Trigger: CCACCGAATATAGAGACTCCAAAGCCAAACCTTGGA...GCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTCAGGCCATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| 3UTR CAA 72 bp | ACCATCCAAGACCCACTGCCAAAACAAAGCCTGCCTTaGTCTCAGAGTGTGGAAACACTAAGGTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TIQDPLPKQSLP*SQSVETLRFPQ Trigger: CTGTGGAAACCTTAGTGTTTCCACACTCTGAGACAAAGGCAGGCTTTGTTTTGGCAGTGGGTCTTGGATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTGAGACTATTGCATGTGACCCTGTGATGGTGGACCGGGAGGTCCTCAGAGATGGACTTTATTATTaGCTGTTAGACTGGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSETIACDPVMVDREVLRDGLYY*LLDWDR Trigger: CCTATCCCAGTCTAACAGGCAATAATAAAGTCCATC...TCTGAGGACCTCCCGGTCCACCATCACAGGGTCACATGCAATAGTCTCACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTGATCCTTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACTTTGTTCCGAAGGTCTaGAGTTCCAGCAGCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WLILYLKPDSLSWNSFVDFVPKV*SSSSLH Trigger: GTGCAAGCTGCTGGAACTGCAGACCTTCGGAACAAA...GTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | TTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGTTCTGGCAGCGACTTTaGTGTCAATCCAAAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FISSQTVLAGIPLWTPLLFWQRL*CQSKAS Trigger: GCTTGCTTTGGATTGACACCAAAGTCGCTGCCAGAA...CAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGACGGTATTCCAAGGTTTaGCTTTGGAGTCTCTATATT | + |
|
Preference number: 4 (lower is better) Translates to: SSQTVLAGIPLWTPLLSGRYSKV*LWSLYI Trigger: AATATAGAGACTCCAAAGCCAAACCTTGGAATACCG...TCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATCCTTTATCTCAAGTTAGCGCATTACCATaGAGTAGCCTCCACACTATT | + |
|
Preference number: 4 (lower is better) Translates to: LWDGHKASNDLMADPLSQVSALP*SSLHTI Trigger: AATAGTGTGGAGGCTACTGCATGGTAATGCGCTAAC...TTGAGATAAAGGATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTTCTTGAAGGAATTTTaGTATTTCCAGTTTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSLLASLGWSQGLQRLNGFLKEF*YFQFGS Trigger: GCTGCCAAACTGGAAATAGCAAAATTCCTTCAAGAA...GCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | CTGATCCTTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCCTTGGCCTGGAGGATTaGTTCTTTGGAAATAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LILYLKPDSLSWNSFVDALGLED*FFGNSC Trigger: GCAACTATTTCCAAAGAAGCAATCCTCCAGGCCAAG...GGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGAGCGGAAAGTTCAATAGGCTTTaGCTTCACATCTATCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSQTVLAGIPLWTPLLSGKFNRL*LHIYQV Trigger: TACCTGATAGATGTGAAGCCAAAGCCTATTGAACTT...TCCGCTCAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR TCA 90 bp | ATTATGAACACCATAAATGGAACCAAGCGGAAGACATCGGCACACGTTCTCAACGTGGAGAAATGCAAGTaGTGGGAAATGAGAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IMNTINGTKRKTSAHVLNVEKCK*WEMRAG Trigger: TCCTGCTCTCATTTCCCATCACTTGCATTTCTCCAC...GTTGAGAACGTGTGCCGATGTCTTCCGCTTGGTTCCATTTATGGTGTTCATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR CCA 90 bp | ATTATGAACACCATAAATGGAACCAAGCGGAAGACATCGGCACACGTTCTCAACTTCTGGCAGCGACTTTaGTGTCAATCCAAAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IMNTINGTKRKTSAHVLNFWQRL*CQSKAS Trigger: GCTTGCTTTGGATTGACACCAAAGTCGCTGCCAGAA...GTTGAGAACGTGTGCCGATGTCTTCCGCTTGGTTCCATTTATGGTGTTCATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATCCTTTATCTCAATTCACTTTCAAAAGTTaGTGGCAACATGTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LWDGHKASNDLMADPLSQFTFKS*WQHVWE Trigger: TTCCCAGACATGTTGCCATCAACTTTTGAAAGTGAA...TTGAGATAAAGGATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR GCA 90 bp | TTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGGATGGACTTTATTATTaGCTGTTAGACTGGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: FISSQTVLAGIPLWTPLLDGLYY*LLDWDR Trigger: CCTATCCCAGTCTAACAGGCAATAATAAAGTCCATC...CAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | ATTATGAACACCATAAATGGAACCAAGCGGAAGACATCGGCACACGTTCTCAACCTGGTCCGTAAGGGATaGACTTTATTATTGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IMNTINGTKRKTSAHVLNLVRKG*TLLLPV Trigger: AACAGGCAATAATAAAGTCCATCCCTTACGGACCAG...GTTGAGAACGTGTGCCGATGTCTTCCGCTTGGTTCCATTTATGGTGTTCATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR CCA 90 bp | CTGATCCTTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCGAGCTTCAGAAACACTaGTATCAAGAACTCCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LILYLKPDSLSWNSFVDAELQKH*YQELHK Trigger: TTTATGGAGTTCTTGATACCAGTGTTTCTGAAGCTC...GGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTAAGATCAGAATTAAACAGGTTCCCAGGGGCTGGGAGGATATATATATACACGCAAGTGAGAATCTaGCAAGTGGAGAAATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVRSELNRFPGAGRIYIYTQVRI*QVEKCK Trigger: CTTGCATTTCTCCACTTGCCAGATTCTCACTTGCGT...GTATATATATATCCTCCCAGCCCCTGGGAACCTGTTTAATTCTGATCTTACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| 3UTR CAA 72 bp | GGAAGAATTCAGTCTGAAGTGTGTGATTCCAATTGCTaGGCATTCTGGGAAAGACAAAACTACAGAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRIQSEVCDSNC*AFWERQNYRGK Trigger: TTTCCCTCTGTAGTTTTGTCTTTCCCAGAATGCCAAGCAATTGGAATCACACACTTCAGACTGAATTCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| 3UTR CAA 72 bp | CTCTCTAGTCCCTCATGGGAGAACTGTAATTGCATATaGCTAAGTGGAAGAATTCAGTCTGAAGTGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSPSWENCNCI*LSGRIQSEVCD Trigger: ATCACACACTTCAGACTGAATTCTTCCACTTAGCAATATGCAATTACAGTTCTCCCATGAGGGACTAGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS GCA 90 bp | TCCTTCAAGTGGAGGTCCAGCCACCCTGTGAGCTGCTGGCACAGTTaGTCCTCAGTGAGGCCCAGCGACCTCATCCCCCGGGCCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SFKWRSSHPVSCWHS*SSVRPSDLIPRARH Trigger: GTGCCGGGCCCGGGGGATGAGGTCGCTGGGCCTCACTGAGGAGCAACTGTGCCAGCAGCTCACAGGGTGGCTGGACCTCCACTTGAAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS CCA 90 bp | GGGACGTTCTCCTTCAAGTGGAGGTCCAGCCACCCTGTGAGCTGCTaGCACAGTTGCTCCTCAGTGAGGCCCAGCGACCTCATCCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GTFSFKWRSSHPVSC*HSCSSVRPSDLIPR Trigger: CCGGGGGATGAGGTCGCTGGGCCTCACTGAGGAGCAACTGTGCCAGCAGCTCACAGGGTGGCTGGACCTCCACTTGAAGGAGAACGTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS GCA 90 bp | GGAGGGACGTTCTCCTTCAAGTGGAGGTCCAGCCACCCTGTGAGCTaGTGGCACAGTTGCTCCTCAGTGAGGCCCAGCGACCTCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGTFSFKWRSSHPVS*WHSCSSVRPSDLIP Trigger: GGGGATGAGGTCGCTGGGCCTCACTGAGGAGCAACTGTGCCAGCAGCTCACAGGGTGGCTGGACCTCCACTTGAAGGAGAACGTCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS TCA 90 bp | GCCCAGCGACCTCATCCCCCGGGCCCGGCACGCAGACTGCAGTTCTaGCACACTCAAAGCCTTCACCCCTTCTTTGGCAATTATTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: AQRPHPPGPARRLQF*HTQSLHPFFGNYFI Trigger: GATGAAATAATTGCCAAAGAAGGGGTGAAGGCTTTGAGTGTGTCAGAACTGCAGTCTGCGTGCCGGGCCCGGGGGATGAGGTCGCTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS GCA 90 bp | GAGGGCTTGCTGCCTTTGGCTTCCCTGTTTGCTCCAGCTGAGGTTTaGCAGGGACATGTTGTAGCCAGCAGGTTGTGTGCAGTTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGLLPLASLFAPAEV*QGHVVASRLCAVFV Trigger: CACAAAAACTGCACACAACCTGCTGGCTACAACATGTCCCTGGCAAACCTCAGCTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS GCA 90 bp | TTCTGTAGTCTCTGTCTTGGCTTCTTTGGTAGGCTGAGGGCTTGCTaGCTTTGGCTTCCCTGTTTGCTCCAGCTGAGGTTTGCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FCSLCLGFFGRLRAC*LWLPCLLQLRFARD Trigger: GTCCCTGGCAAACCTCAGCTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTCAGCCTACCAAAGAAGCCAAGACAGAGACTACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS CCA 90 bp | AGTCTCTGTCTTGGCTTCTTTGGTAGGCTGAGGGCTTGCTGCCTTTaGCTTCCCTGTTTGCTCCAGCTGAGGTTTGCCAGGGACATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLCLGFFGRLRACCL*LPCLLQLRFARDML Trigger: CAACATGTCCCTGGCAAACCTCAGCTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTCAGCCTACCAAAGAAGCCAAGACAGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS CCA 90 bp | GGAAGACATCGGCACACGTTCTCAACAGCCTTCGCCTCTCTCGTCTaGTTAGCGCATTACCATGCAGTAGCCTCCACACTATTCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRHRHTFSTAFASLV*LAHYHAVASTLFWQ Trigger: CTGCCAGAATAGTGTGGAGGCTACTGCATGGTAATGCGCTAACCAGACGAGAGAGGCGAAGGCTGTTGAGAACGTGTGCCGATGTCTTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210810.2 |
||
| CDS-3UTR CAA 90 bp | GAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTCTTTGGCTTCCCTGTTaGCTCCAGCTGAGGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELGVTACISGMVTRPPTTLWLPC*LQLRFA Trigger: GGCAAACCTCAGCTGGAGCAAACAGGGAAGCCAAAG...AGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTGAGACTATTGCATGTGACCCTGTGATGGTGGACCGGGAGGTCCTCAGACTTTGGCTTCCCTGTTaGCTCCAGCTGAGGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSETIACDPVMVDREVLRLWLPC*LQLRFA Trigger: GGCAAACCTCAGCTGGAGCAAACAGGGAAGCCAAAG...TCTGAGGACCTCCCGGTCCACCATCACAGGGTCACATGCAATAGTCTCACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR CAA 90 bp | TGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGAGGGCTTGCTGCCTTaGGCTTCCCTGTTTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CHCLHLWDGHKASNDLMAEGLLP*ASLFAP Trigger: TGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTC...AGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATCCTTTATCTCAAGAGCTGCTGGCACAGTaGCTCCTCAGTGAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LWDGHKASNDLMADPLSQELLAQ*LLSEAQ Trigger: CTGGGCCTCACTGAGGAGCAACTGTGCCAGCAGCTC...TTGAGATAAAGGATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS GCA 90 bp | TTCTTCTGTAGTCTCTGTCTTGGCTTCTTTGGTAGGCTGAGGGCTTaGTGCCTTTGGCTTCCCTGTTTGCTCCAGCTGAGGTTTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FFCSLCLGFFGRLRA*CLWLPCLLQLRFAR Trigger: CCTGGCAAACCTCAGCTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTCAGCCTACCAAAGAAGCCAAGACAGAGACTACAGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATCCTTTATCTCAATGCAGTTCCAGCAGCTaGCACAGGGCAACCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWDGHKASNDLMADPLSQCSSSS*HRATSW Trigger: CCAGCTGGTTGCCCTGTGCAAGCTGCTGGAACTGCA...TTGAGATAAAGGATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGGAAGCGGAGCAGATaGTTTGTTCCGAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLLASLGWSQGLQRLNGWKRSR*FVPKVC Trigger: GCAGACCTTCGGAACAAACAATCTGCTCCGCTTCCA...GCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS GCA 90 bp | GTTCTCAACAGCCTTCGCCTCTCTCGTCTGGTTAGCGCATTACCATaGAGTAGCCTCCACACTATTCTGGCAGCGACTTTGGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: VLNSLRLSRLVSALP*SSLHTILAATLVSI Trigger: GATTGACACCAAAGTCGCTGCCAGAATAGTGTGGAGGCTACTGCATGGTAATGCGCTAACCAGACGAGAGAGGCGAAGGCTGTTGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210810.2 |
||
| CDS GCA 90 bp | TTCTTGCCTACCCTTCGCCTCTCTCGTCTGGTTAGCGCATTACCATaGAGTAGCCTCCACACTATTCTGGCAGCGACTTTGGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: FLPTLRLSRLVSALP*SSLHTILAATLVSI Trigger: GATTGACACCAAAGTCGCTGCCAGAATAGTGTGGAGGCTACTGCATGGTAATGCGCTAACCAGACGAGAGAGGCGAAGGGTAGGCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR CAA 90 bp | AGTCACATGTACCACACGGATGCAAGTTGTTATCAACAGCAAACCCACAGGCTGGAGGGCTTGCTGCCTTaGGCTTCCCTGTTTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHMYHTDASCYQQQTHRLEGLLP*ASLFAP Trigger: TGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTC...CAGCCTGTGGGTTTGCTGTTGATAACAACTTGCATCCGTGTGGTACATGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCATTCTGGCAGCGACTTaGGTGTCAATCCAAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSLLASLGWSQGLQRLNGILAAT*VSIQSK Trigger: CTTGCTTTGGATTGACACCAAAGTCGCTGCCAGAAT...GCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTGATCCTTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGAGGTCTCCTGGGACTaGGCCTGGAGGATTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLILYLKPDSLSWNSFVDEVSWD*AWRIAS Trigger: AGAAGCAATCCTCCAGGCCAAGTCCCAGGAGACCTC...GTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | TTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGGCTTGTGACCTGTTaGGACCTGTTTCACATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVSLLASLGWSQGLQRLNGLVTC*DLFHIG Trigger: TCCTATGTGAAACAGGTCCAAACAGGTCACAAGCCC...ATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | TTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCACTGCTGCCTTTGGAATCAGCCTaGCTGTTCTGTGAGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FISSQTVLAGIPLWTPLLPLESA*LFCEVS Trigger: GGAGACCTCACAGAACAGCAAGGCTGATTCCAAAGG...CAGCAGTGGCGTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS CCA 90 bp | GGACATGTTGTAGCCAGCAGGTTGTGTGCAGTTTTTGTGGGAGCCTaGTCCGTAAGGGATGGACTTTATTATTGCCTGTTAGACTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHVVASRLCAVFVGA*SVRDGLYYCLLDWD Trigger: ATCCCAGTCTAACAGGCAATAATAAAGTCCATCCCTTACGGACCAGGCTCCCACAAAAACTGCACACAACCTGCTGGCTACAACATGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAATTCACTTTCAAAAGTaGATGGCAACATGTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WPELGVTACISGMVTRPPIHFQK*MATCLG Trigger: TCCCAGACATGTTGCCATCAACTTTTGAAAGTGAAT...TGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTCAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCTGAACTTGGTGTCACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCATCGCCATCTCTGTCATaGTTTCTTGAAGGAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WPELGVTACISGMVTRPPSPSLS*FLEGIL Trigger: CAAAATTCCTTCAAGAAACAATGACAGAGATGGCGA...TGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTGACACCAAGTTCAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | CACTGCTTGCATCTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATCGGTACTGGGGGCAGTaGTATAAATTCTTCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HCLHLWDGHKASNDLMADRYWGQ*YKFFIL Trigger: AAGGATGAAGAATTTATACAACTGCCCCCAGTACCG...ATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAGATGCAAGCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS CCA 90 bp | GTTTGGCTTTGGAGTCTCTATATTCGGTGGAAGTTCAATAGGCTTTaGCTTCACATCTATCAGGTAGAAGGTGCGCGACAGGAGCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VWLWSLYIRWKFNRL*LHIYQVEGARQEQK Trigger: CTTTTGCTCCTGTCGCGCACCTTCTACCTGATAGATGTGAAGCCAAAGCCTATTGAACTTCCACCGAATATAGAGACTCCAAAGCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGAAACATCTGTAGTCACCAGACTGAAAGAGAGACACAGCAGATACAAAATTCTGGCAGCGACTTaGGTGTCAATCCAAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QRETSVVTRLKERHSRYKILAAT*VSIQSK Trigger: CTTGCTTTGGATTGACACCAAAGTCGCTGCCAGAAT...TTTGTATCTGCTGTGTCTCTCTTTCAGTCTGGTGACTACAGATGTTTCCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS CCA 90 bp | ATTATTTCATCATCTGCTTTTATAGACTTCAGTGTCATCAGGAGCTaGAAGCGGAGCAGATTGTTTGTTCCGAAGGTCTGCAGTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IISSSAFIDFSVIRS*KRSRLFVPKVCSSS Trigger: GCTGGAACTGCAGACCTTCGGAACAAACAATCTGCTCCGCTTCCAGCTCCTGATGACACTGAAGTCTATAAAAGCAGATGATGAAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS CCA 90 bp | AGGTGTCGGTATTCCAAGGTTTGGCTTTGGAGTCTCTATATTCGGTaGAAGTTCAATAGGCTTTGGCTTCACATCTATCAGGTAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCRYSKVWLWSLYIR*KFNRLWLHIYQVEG Trigger: ACCTTCTACCTGATAGATGTGAAGCCAAAGCCTATTGAACTTCCACCGAATATAGAGACTCCAAAGCCAAACCTTGGAATACCGACACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTGATCCTTTATCTCAAGCCAGACAGTCTTAGCTGGAATTCCTTTGTGGACGCCTTCACCCCTTCTTaGGCAATTATTTCATCATCT | + |
|
Preference number: 5 (lower is better) Translates to: WLILYLKPDSLSWNSFVDAFTPS*AIISSS Trigger: AGATGATGAAATAATTGCCAAAGAAGGGGTGAAGGC...GTCCACAAAGGAATTCCAGCTAAGACTGTCTGGCTTGAGATAAAGGATCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS CCA 90 bp | TGGTATCAAGAACTCCATAAAAGGTACAATTATGAACACCATAAATaGAACCAAGCGGAAGACATCGGCACACGTTCTCAACAGCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: WYQELHKRYNYEHHK*NQAEDIGTRSQQPS Trigger: CGAAGGCTGTTGAGAACGTGTGCCGATGTCTTCCGCTTGGTTCCATTTATGGTGTTCATAATTGTACCTTTTATGGAGTTCTTGATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210810.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGATGGTCACAAGGCCTCCAACGACTTAATGGCTGATCCTTTATCTCAATTCATTCACAATTTTTaGTCTCAACGACCGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LWDGHKASNDLMADPLSQFIHNF*SQRPLF Trigger: GAAAAGCGGTCGTTGAGACAAAAAATTGTGAATGAA...TTGAGATAAAGGATCAGCCATTAAGTCGTTGGAGGCCTTGTGACCATCCCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS CCA 90 bp | TGGTATCAAGAACTCCATAAAAGGTACAATTATGAACACCATAAATaGAACCAAGCGGAAGACATCGGCACACGTTCTCAACAGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: WYQELHKRYNYEHHK*NQAEDIGTRSQQHA Trigger: TGCATGCTGTTGAGAACGTGTGCCGATGTCTTCCGCTTGGTTCCATTTATGGTGTTCATAATTGTACCTTTTATGGAGTTCTTGATACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211422.2 |
||
| CDS CAA 90 bp | CTCCTTCAAGTGGAGGTCCAGCCACCCTGTGAGCTGCTGGCACAGTaGCTCCTCAGTGAGGCCCAGCGACCTCATCCCCCGGGCCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLQVEVQPPCELLAQ*LLSEAQRPHPPGPA Trigger: TGCCGGGCCCGGGGGATGAGGTCGCTGGGCCTCACTGAGGAGCAACTGTGCCAGCAGCTCACAGGGTGGCTGGACCTCCACTTGAAGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS GCA 72 bp | TTCTCCTTCAAGTGGAGGTCCAGCCACCCTGTGAGCTaGTGGCACAGTTGCTCCTCAGTGAGGCCCAGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSFKWRSSHPVS*WHSCSSVRPSD Trigger: GTCGCTGGGCCTCACTGAGGAGCAACTGTGCCAGCAGCTCACAGGGTGGCTGGACCTCCACTTGAAGGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS CAA 90 bp | AAGCGGAGCAGATTGTTTGTTCCGAAGGTCTGCAGTTCCAGCAGCTaGCACAGGGCAACCAGCTGGGGCCGGTCTAAGTGTTCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KRSRLFVPKVCSSSS*HRATSWGRSKCSRA Trigger: AGCCCTGGAACACTTAGACCGGCCCCAGCTGGTTGCCCTGTGCAAGCTGCTGGAACTGCAGACCTTCGGAACAAACAATCTGCTCCGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS TCA 72 bp | GGGCTTGCTGCCTTTGGCTTCCCTGTTTGCTCCAGCTaGGGTTTGCCAGGGACATGTTGTAGCCAGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GLAAFGFPVCSS*GLPGTCCSQQV Trigger: AACCTGCTGGCTACAACATGTCCCTGGCAAACCTCAGCTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS GCA 72 bp | GGTTTGCCAGGGACATGTTGTAGCCAGCAGGTTGTGTaGAGTTTTTGTGGGAGCCTGGTCCGTAAGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPGTCCSQQVV*SFCGSLVRKGW Trigger: CCATCCCTTACGGACCAGGCTCCCACAAAAACTGCACACAACCTGCTGGCTACAACATGTCCCTGGCAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS GCA 72 bp | CTGCCTTTGGCTTCCCTGTTTGCTCCAGCTGAGGTTTaGCAGGGACATGTTGTAGCCAGCAGGTTGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLASLFAPAEV*QGHVVASRLCA Trigger: TGCACACAACCTGCTGGCTACAACATGTCCCTGGCAAACCTCAGCTGGAGCAAACAGGGAAGCCAAAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS GCA 72 bp | AGTCTCTGTCTTGGCTTCTTTGGTAGGCTGAGGGCTTaGTGCCTTTGGCTTCCCTGTTTGCTCCAGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLCLGFFGRLRA*CLWLPCLLQLR Trigger: CCTCAGCTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTCAGCCTACCAAAGAAGCCAAGACAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS CCA 72 bp | CGGCACACGTTCTCAACAGCCTTCGCCTCTCTCGTCTaGTTAGCGCATTACCATGCAGTAGCCTCCACACTA | + |
|
Preference number: 6 (lower is better) Translates to: RHTFSTAFASLV*LAHYHAVASTL Trigger: TAGTGTGGAGGCTACTGCATGGTAATGCGCTAACCAGACGAGAGAGGCGAAGGCTGTTGAGAACGTGTGCCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210810.2 |
||
| CDS CAA 72 bp | GCTGAGGTTTGCCAGGGACATGTTGTAGCCAGCAGGTaGTGTGCAGTTTTTGTGGGAGCCTGGTCCGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AEVCQGHVVASR*CAVFVGAWSVR Trigger: CCTTACGGACCAGGCTCCCACAAAAACTGCACACAACCTGCTGGCTACAACATGTCCCTGGCAAACCTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS CAA 72 bp | AGATTGTTTGTTCCGAAGGTCTGCAGTTCCAGCAGCTaGCACAGGGCAACCAGCTGGGGCCGGTCTAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLFVPKVCSSSS*HRATSWGRSKC Trigger: ACACTTAGACCGGCCCCAGCTGGTTGCCCTGTGCAAGCTGCTGGAACTGCAGACCTTCGGAACAAACAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
||
| CDS GCA 72 bp | CTCTGTCTTGGCTTCTTTGGTAGGCTGAGGGCTTGCTaGCTTTGGCTTCCCTGTTTGCTCCAGCTGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LCLGFFGRLRAC*LWLPCLLQLRF Trigger: AAACCTCAGCTGGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTCAGCCTACCAAAGAAGCCAAGACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
||
| CDS GCA 72 bp | AGCCTTCGCCTCTCTCGTCTGGTTAGCGCATTACCATaGAGTAGCCTCCACACTATTCTGGCAGCGACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLRLSRLVSALP*SSLHTILAATL Trigger: CAAAGTCGCTGCCAGAATAGTGTGGAGGCTACTGCATGGTAATGCGCTAACCAGACGAGAGAGGCGAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210810.2 |
||
| CDS GCA 72 bp | ACCCTTCGCCTCTCTCGTCTGGTTAGCGCATTACCATaGAGTAGCCTCCACACTATTCTGGCAGCGACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLRLSRLVSALP*SSLHTILAATL Trigger: CAAAGTCGCTGCCAGAATAGTGTGGAGGCTACTGCATGGTAATGCGCTAACCAGACGAGAGAGGCGAAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
||
| CDS CCA 72 bp | CATGTTTTTGTAACTCCAGCCCAGAAGTCGCTGGCCTaGGACGAGCCCCATCACCTGTTTCACATAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HVFVTPAQKSLA*DEPHHLFHIGG Trigger: TCCTCCTATGTGAAACAGGTGATGGGGCTCGTCCCAGGCCAGCGACTTCTGGGCTGGAGTTACAAAAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210810.2 |
||
| CDS CAA 90 bp | TTTGCTCCAGCTGAGGTTTGCCAGGGACATGTTGTAGCCAGCAGGTaGTGTGCAGTTTTTGTGGGAGCCTGGTCCGTAAGGGATGGACTT | + |
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Preference number: 6 (lower is better) Translates to: FAPAEVCQGHVVASR*CAVFVGAWSVRDGL Trigger: AAGTCCATCCCTTACGGACCAGGCTCCCACAAAAACTGCACACAACCTGCTGGCTACAACATGTCCCTGGCAAACCTCAGCTGGAGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
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| CDS TCA 72 bp | TCTTCTGTAGTCTCTGTCTTGGCTTCTTTGGTAGGCTaGGGGCTTGCTGCCTTTGGCTTCCCTGTTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSVVSVLASLVG*GLAAFGFPVCS Trigger: GGAGCAAACAGGGAAGCCAAAGGCAGCAAGCCCTCAGCCTACCAAAGAAGCCAAGACAGAGACTACAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
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| CDS CCA 72 bp | GCCTTGCTGTTCTGTGAGGTCTCCTGGGACTTGGCCTaGAGGATTGCTTCTTTGGAAATAGTTGCTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: ALLFCEVSWDLA*RIASLEIVAAG Trigger: ACCAGCAGCAACTATTTCCAAAGAAGCAATCCTCCAGGCCAAGTCCCAGGAGACCTCACAGAACAGCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS CCA 72 bp | AAATCTGTTTCTTGCCTACCCTTCGCCTCTCTCGTCTaGTTAGCGCATTACCATGCAGTAGCCTCCACACTA | + |
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Preference number: 6 (lower is better) Translates to: KSVSCLPFASLV*LAHYHAVASTL Trigger: TAGTGTGGAGGCTACTGCATGGTAATGCGCTAACCAGACGAGAGAGGCGAAGGGTAGGCAAGAAACAGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210616.2 |
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| CDS CAA 72 bp | CCTAACTATCTCCTTCGTGGAGGGCTTGTGACCTGTTaGGACCTGTTTCACATAGGAGGAAAGCTGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PNYLLRGGLVTC*DLFHIGGKLGR Trigger: TCTTCCCAGCTTTCCTCCTATGTGAAACAGGTCCAAACAGGTCACAAGCCCTCCACGAAGGAGATAGTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS CCA 72 bp | GTAGCCAGCAGGTTGTGTGCAGTTTTTGTGGGAGCCTaGTCCGTAAGGGATGGACTTTATTATTGCCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: VASRLCAVFVGA*SVRDGLYYCLL Trigger: TAACAGGCAATAATAAAGTCCATCCCTTACGGACCAGGCTCCCACAAAAACTGCACACAACCTGCTGGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
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| CDS CCA 72 bp | TCATCTGCTTTTATAGACTTCAGTGTCATCAGGAGCTaGAAGCGGAGCAGATTGTTTGTTCCGAAGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSAFIDFSVIRS*KRSRLFVPKVC Trigger: GCAGACCTTCGGAACAAACAATCTGCTCCGCTTCCAGCTCCTGATGACACTGAAGTCTATAAAAGCAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS CCA 72 bp | TGGAGTCTCTATATTCGGTGGAAGTTCAATAGGCTTTaGCTTCACATCTATCAGGTAGAAGGTGCGCGACAG | + |
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Preference number: 6 (lower is better) Translates to: WSLYIRWKFNRL*LHIYQVEGARQ Trigger: CTGTCGCGCACCTTCTACCTGATAGATGTGAAGCCAAAGCCTATTGAACTTCCACCGAATATAGAGACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS TCA 72 bp | AGTTGTATAAATTCTTCATCCTTCGTTCCCTTCAGCTaGGGTGCAGAGTCTGTGAGGTTCTCCTTTGACTCG | + |
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Preference number: 6 (lower is better) Translates to: SCINSSSFVPFS*GAESVRFSFDS Trigger: CGAGTCAAAGGAGAACCTCACAGACTCTGCACCTCAGCTGAAGGGAACGAAGGATGAAGAATTTATACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS CAA 90 bp | CACGCAGACTGCAGTTCTGACACACTCAAAGCCTTCACCCCTTCTTaGGCAATTATTTCATCATCTGCTTTTATAGACTTCAGTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: HADCSSDTLKAFTPS*AIISSSAFIDFSVI Trigger: GATGACACTGAAGTCTATAAAAGCAGATGATGAAATAATTGCCAAAGAAGGGGTGAAGGCTTTGAGTGTGTCAGAACTGCAGTCTGCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS CAA 72 bp | TGCAGTTCTGACACACTCAAAGCCTTCACCCCTTCTTaGGCAATTATTTCATCATCTGCTTTTATAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: CSSDTLKAFTPS*AIISSSAFIDF Trigger: GAAGTCTATAAAAGCAGATGATGAAATAATTGCCAAAGAAGGGGTGAAGGCTTTGAGTGTGTCAGAACTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079160.8 |
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| CDS CAA 90 bp | CAAGCTGAATCCTTTGTAATAGTATTTAAGTTCATTCACAATTTTTaGTCTCAACGACCGCTTTTCTTCTGTAGTCTCTGTCTTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QAESFVIVFKFIHNF*SQRPLFFCSLCLGF Trigger: GAAGCCAAGACAGAGACTACAGAAGAAAAGCGGTCGTTGAGACAAAAAATTGTGAATGAACTTAAATACTATTACAAAGGATTCAGCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079160.8 ENSMUST00000210234.2 ENSMUST00000210616.2 ENSMUST00000210810.2 ENSMUST00000211422.2 |
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