Pregenerated sensors for LETM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005299Ensembl transcript IDs: ENSMUST00000005431.6, ENSMUST00000148451.2, ENSMUST00000200827.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCGTAACCACCAGCCTTGCAGAGGCAGGTGTCCATGTTGTTCTTaGTGCGGTGCCCTGGCACTCAGGCCTCTGAGTCCAACAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SRNHQPCRGRCPCCS*CGALALRPLSPTAE Trigger: CTCAGCTGTTGGACTCAGAGGCCTGAGTGCCAGGGCACCGCAGCAAGAACAACATGGACACCTGCCTCTGCAAGGCTGGTGGTTACGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200827.2 |
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| 3UTR CCA 90 bp | GCCAAAAGGAGCCTGGAATTTAGGTGCCAGCTCTCCAGATCCTGGTaGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: AKRSLEFRCQLSRSW*EGGSEWREETPGSW Trigger: CCAGGAGCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGGAGAGCTGGCACCTAAATTCCAGGCTCCTTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | CAAAGTCCAGGTGCACAGCCTGCAGCCTCCAGCACACATGGACAGTaGCATATTCAGTCATGGGGTACACAGCCTGCAGCCTCCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: QSPGAQPAASSTHGQ*HIQSWGTQPAASST Trigger: TGTGCTGGAGGCTGCAGGCTGTGTACCCCATGACTGAATATGTCACTGTCCATGTGTGCTGGAGGCTGCAGGCTGTGCACCTGGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR CCA 90 bp | TCCCTGACAAAGTCCAGGTGCACAGCCTGCAGCCTCCAGCACACATaGACAGTGACATATTCAGTCATGGGGTACACAGCCTGCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: SLTKSRCTACSLQHT*TVTYSVMGYTACSL Trigger: GAGGCTGCAGGCTGTGTACCCCATGACTGAATATGTCACTGTCCATGTGTGCTGGAGGCTGCAGGCTGTGCACCTGGACTTTGTCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR TCA 90 bp | CCACAGGACACCCAGCCCTGGCCTGTCCATGGAGCCATTTCCAAATaGGAAAGGCAAAGAGCTCTAGACTGTCCACTTAGAGGGGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: PQDTQPWPVHGAISK*ERQRALDCPLRGVP Trigger: TGGCACCCCTCTAAGTGGACAGTCTAGAGCTCTTTGCCTTTCTCATTTGGAAATGGCTCCATGGACAGGCCAGGGCTGGGTGTCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | CACAGGACCTGCAACCCACACCTCTGCGGACTTATGCAGGGAAACTaGGTCCACAGAGCACCCACAGATCTGCATTTGGTGTTGGCACTT | + |
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Preference number: 1 (lower is better) Translates to: HRTCNPHLCGLMQGN*VHRAPTDLHLVLAL Trigger: AAGTGCCAACACCAAATGCAGATCTGTGGGTGCTCTGTGGACTCAGTTTCCCTGCATAAGTCCGCAGAGGTGTGGGTTGCAGGTCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR GCA 90 bp | TCCACCTGCCTTTGCCTTCCAAGTGCTGGGATTAAAGGCGCACACTaGTATCACTGCCTGGTGGATCTGCTATTTCTAACCCTGACCCAG | + |
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Preference number: 1 (lower is better) Translates to: STCLCLPSAGIKGAH*YHCLVDLLFLTLTQ Trigger: CTGGGTCAGGGTTAGAAATAGCAGATCCACCAGGCAGTGATAGCAGTGTGCGCCTTTAATCCCAGCACTTGGAAGGCAAAGGCAGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | GGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTCCTGGGTTaGACCCTTAATTTAACAGGTGCAGACATGTCAGCTCCTGAACGT | + |
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Preference number: 1 (lower is better) Translates to: GRWFRVERGNARLLG*TLNLTGADMSAPER Trigger: ACGTTCAGGAGCTGACATGTCTGCACCTGTTAAATTAAGGGTTCAACCCAGGAGCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR CCA 90 bp | CAAAGAGCTCTAGACTGTCCACTTAGAGGGGTGCCAGTGAACTGTTaGCGGGCAGGGAACACCATTCTGAAAGCTTTGTGGCATCACAGT | + |
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Preference number: 1 (lower is better) Translates to: QRALDCPLRGVPVNC*RAGNTILKALWHHS Trigger: ACTGTGATGCCACAAAGCTTTCAGAATGGTGTTCCCTGCCCGCCAACAGTTCACTGGCACCCCTCTAAGTGGACAGTCTAGAGCTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | AGTATCACTTTGCGCTGTTACATGAACATGGGAGATGTCTACACATaGTCTAGCTGGAGGCACTGGGACCCCTGGAAGACAGAAGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: SITLRCYMNMGDVYT*SSWRHWDPWKTEEG Trigger: ACCCTCTTCTGTCTTCCAGGGGTCCCAGTGCCTCCAGCTAGATCATGTGTAGACATCTCCCATGTTCATGTAACAGCGCAAAGTGATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | CTCCTGAACGTACACCCTGGGCAAGTGCTGAGGTACAGGACAGAATaGCAGTTGAAATACAGCCAGCTTTCAAATGCTCAGTCTGAGTAC | + |
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Preference number: 1 (lower is better) Translates to: LLNVHPGQVLRYRTE*QLKYSQLSNAQSEY Trigger: GTACTCAGACTGAGCATTTGAAAGCTGGCTGTATTTCAACTGTCATTCTGTCCTGTACCTCAGCACTTGCCCAGGGTGTACGTTCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | AAGAAACAAAACCAAGAAATAAGGAGGAAGAAGCTGTCAGTTCCCTaGCAAAGTCCAGGTGCACAGCCTGCAGCCTCCAGCACACATGGA | + |
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Preference number: 1 (lower is better) Translates to: KKQNQEIRRKKLSVP*QSPGAQPAASSTHG Trigger: TCCATGTGTGCTGGAGGCTGCAGGCTGTGCACCTGGACTTTGTCAGGGAACTGACAGCTTCTTCCTCCTTATTTCTTGGTTTTGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR TCA 90 bp | ACACCAAACCCAGCTACATATGTGACGATGTCAGGCAGGATGTGTTaGAGTACACCTGTAAACCCAGTAACTGGAAGGCTAAGCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: TPNPATYVTMSGRMC*STPVNPVTGRLSRR Trigger: CCTCCTGCTTAGCCTTCCAGTTACTGGGTTTACAGGTGTACTTCAACACATCCTGCCTGACATCGTCACATATGTAGCTGGGTTTGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR TCA 90 bp | TCTGCTATTTCTAACCCTGACCCAGGTCAGTTAAGCAAACAGATGTaGGGACAACTCCAAAAACCAAGGGAAGCATCCACTGGCAGACCT | + |
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Preference number: 1 (lower is better) Translates to: SAISNPDPGQLSKQM*GQLQKPREASTGRP Trigger: AGGTCTGCCAGTGGATGCTTCCCTTGGTTTTTGGAGTTGTCCTCACATCTGTTTGCTTAACTGACCTGGGTCAGGGTTAGAAATAGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | CATACAACAGGGAGTGTGGGAGCCATTTTTCTTCAAGAAGCTCCATaGCACTGGCCTTGCAATGCCACCAAAGCTTCATTTGAGATGCTG | + |
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Preference number: 1 (lower is better) Translates to: HTTGSVGAIFLQEAP*HWPCNATKASFEML Trigger: CAGCATCTCAAATGAAGCTTTGGTGGCATTGCAAGGCCAGTGTCATGGAGCTTCTTGAAGAAAAATGGCTCCCACACTCCCTGTTGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR CCA 90 bp | AAAGCTTTGTGGCATCACAGTACAACTTCCTCACTTCTTGGTGGCTaGAGCACAGCCATGAACATTTGTGCTAAAGAAGCTGGAGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: KALWHHSTTSSLLGG*STAMNICAKEAGAL Trigger: CAAGGCTCCAGCTTCTTTAGCACAAATGTTCATGGCTGTGCTCCAGCCACCAAGAAGTGAGGAAGTTGTACTGTGATGCCACAAAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | GACCAGGATATGGAAGCAGGAGGAGATGAACATACTTCAGTAATCTaGGCGGATAGCAAAGGGTATCTCCTGACCCTACCCTTTTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: DQDMEAGGDEHTSVI*ADSKGYLLTLPFWL Trigger: TAACCAAAAGGGTAGGGTCAGGAGATACCCTTTGCTATCCGCTCAGATTACTGAAGTATGTTCATCTCCTCCTGCTTCCATATCCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR GCA 90 bp | GGACACCAGGATTCAGATTTAACCACGGAGCCACTAGGCTCCTTCTaGTGTTACTATGCACAGGTTTACATGCAAGAATCACCTTATTCC | + |
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Preference number: 1 (lower is better) Translates to: GHQDSDLTTEPLGSF*CYYAQVYMQESPYS Trigger: GGAATAAGGTGATTCTTGCATGTAAACCTGTGCATAGTAACAGCAGAAGGAGCCTAGTGGCTCCGTGGTTAAATCTGAATCCTGGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR GCA 90 bp | GCGGACTTATGCAGGGAAACTGAGTCCACAGAGCACCCACAGATCTaGATTTGGTGTTGGCACTTTGTAAAACTAGACTCTGAAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: ADLCRETESTEHPQI*IWCWHFVKLDSENK Trigger: TTTGTTTTCAGAGTCTAGTTTTACAAAGTGCCAACACCAAATGCAGATCTGTGGGTGCTCTGTGGACTCAGTTTCCCTGCATAAGTCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR CCA 90 bp | TTTGGTAGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATaGTCTGGCAAATGGTGCACTTCAGGGCTAGCCGTACAAATTGCC | + |
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Preference number: 1 (lower is better) Translates to: FGRFHDISISFRLEA*SGKWCTSGLAVQIA Trigger: GGCAATTTGTACGGCTAGCCCTGAAGTGCACCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCTACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR GCA 90 bp | GAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTATATTCAAGTTaGAGATGTCAGTTCTATCCCCAAGGCCTGCTCAGCAATGTGAAT | + |
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Preference number: 1 (lower is better) Translates to: EFSVTSHTKPQVYSS*RCQFYPQGLLSNVN Trigger: ATTCACATTGCTGAGCAGGCCTTGGGGATAGAACTGACATCTGCAACTTGAATATACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR GCA 90 bp | TTCAGATTTAACCACGGAGCCACTAGGCTCCTTCTGCTGTTACTATaGACAGGTTTACATGCAAGAATCACCTTATTCCTGCTTAGCATA | + |
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Preference number: 1 (lower is better) Translates to: FRFNHGATRLLLLLL*TGLHARITLFLLSI Trigger: TATGCTAAGCAGGAATAAGGTGATTCTTGCATGTAAACCTGTGCATAGTAACAGCAGAAGGAGCCTAGTGGCTCCGTGGTTAAATCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR GCA 90 bp | AGAACTCATAAAGATCTGCCTGCTTCTGCTGGAACTAAAGACATGTaGTACCAGCCTGACTACCATCACTATTCTAACCAAAAATCTTGG | + |
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Preference number: 1 (lower is better) Translates to: RTHKDLPASAGTKDM*YQPDYHHYSNQKSW Trigger: CCAAGATTTTTGGTTAGAATAGTGATGGTAGTCAGGCTGGTAGCACATGTCTTTAGTTCCAGCAGAAGCAGGCAGATCTTTATGAGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR TCA 90 bp | AAAGGCTTCTTCAATGTATGTCACCCACTATTTAGGAATTACTCATaGATTAGGCAGACGGTCATGTATGAAAAGTCAGTACTAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: KGFFNVCHPLFRNYS*IRQTVMYEKSVLVS Trigger: ACTGACTAGTACTGACTTTTCATACATGACCGTCTGCCTAATTCATGAGTAATTCCTAAATAGTGGGTGACATACATTGAAGAAGCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR TCA 90 bp | AGCATAATGTTTCCTTTAACAGTTAAGAAAGAAGTTTCAAGAAACTaGGAATGTCCCATTCTGCTCACTGCTTCTCTGTACATGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SIMFPLTVKKEVSRN*ECPILLTASLYMFQ Trigger: CTGGAACATGTACAGAGAAGCAGTGAGCAGAATGGGACATTCTCAGTTTCTTGAAACTTCTTTCTTAACTGTTAAAGGAAACATTATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCAGATCCTGGTGGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTACCACACCAGAGCATaGGTCCACAGAGCCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: LSRSWWEGGSEWREETPGYHTRA*VHRATL Trigger: GAGGGTGGCTCTGTGGACTCATGCTCTGGTGTGGTA...GCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | TGCAGATGTCAGTTCTATCCCCAAGGCCTGCTCAGCAATGTGAATGCCCAACAGGCTCCACACAGGTGCTaGGGTCCAGCTGGTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: CRCQFYPQGLLSNVNAQQAPHRC*GPAGSP Trigger: GGGAGAACCAGCTGGACCTCAGCACCTGTGTGGAGC...CTGTTGGGCATTCACATTGCTGAGCAGGCCTTGGGGATAGAACTGACATCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | CAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCAGCCCTGGCCTGTCCATGGACAACTGTGAAGGCGTaGGCAGACACATCTATGTAC | + |
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Preference number: 2 (lower is better) Translates to: QCEGGGEATGHPALACPWTTVKA*ADTSMY Trigger: GTACATAGATGTGTCTGCTCACGCCTTCACAGTTGT...CCATGGACAGGCCAGGGCTGGGTGTCCTGTGGCCTCACCACCACCTTCACATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGATCCTGGTGGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTCCTATCAGTGTAGGGCTATaGTCCTATTGGCAGCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: PDPGGKVVQSGERKRQAPISVGL*SYWQLY Trigger: GTACAGCTGCCAATAGGATCATAGCCCTACACTGAT...AGGAGCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTGGTGGATCTGCTATTTCTAACCCTGACCCAGGTCAGTTAAGCAAACAGCACTCTTGTGTGTCATaGCCCTGTGGCTGGCACGGC | + |
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Preference number: 2 (lower is better) Translates to: LPGGSAISNPDPGQLSKQHSCVS*PCGWHG Trigger: GCCGTGCCAGCCACAGGGGCATGACACACAAGAGTG...CTGTTTGCTTAACTGACCTGGGTCAGGGTTAGAAATAGCAGATCCACCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCAGATCCTGGTGGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCATTAAAGGCGCACACTaGTATCACTGCCTGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LSRSWWEGGSEWREETPGIKGAH*YHCLVD Trigger: ATCCACCAGGCAGTGATAGCAGTGTGCGCCTTTAAT...GCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGAACGTACACCCTGGGCAAGTGCTGAGGTACAGGACAGAATGACAGTTGAAGGCTCGCTCAGATCCTaGTCCAGGAAGGACACATAC | + |
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Preference number: 2 (lower is better) Translates to: PERTPWASAEVQDRMTVEGSLRS*SRKDTY Trigger: GTATGTGTCCTTCCTGGATCAGGATCTGAGCGAGCC...TTCAACTGTCATTCTGTCCTGTACCTCAGCACTTGCCCAGGGTGTACGTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | AGACTGCTGGTCATAGGAGATACCCTCTACTGTGGGGACACACCTGGCAACCATCTAGCCCAAGGCCTATaGGGACACATAGCAGACACA | + |
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Preference number: 2 (lower is better) Translates to: RLLVIGDTLYCGDTPGNHLAQGL*GHIADT Trigger: TGTGTCTGCTATGTGTCCTCATAGGCCTTGGGCTAG...ATGGTTGCCAGGTGTGTCCCCACAGTAGAGGGTATCTCCTATGACCAGCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCAGACTGCTGGTCATAGGAGATACCCTCTACTGTGGGGACACACCTGGCCTGTGGGTTAGGACTTaGATTTTCTGTTACAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SSRLLVIGDTLYCGDTPGLWVRT*IFCYKP Trigger: TGGCTTGTAACAGAAAATTCAAGTCCTAACCCACAG...GCCAGGTGTGTCCCCACAGTAGAGGGTATCTCCTATGACCAGCAGTCTGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCCACCAAAGCTTCATTTGAGATGCTGTCACCATCTCCTGTGGGCTAAATACCTGACAAAGTCCAGGTaGACAGCCTGCAGCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: MPPKLHLRCCHHLLWAKYLTKSR*TACSLQ Trigger: CTGGAGGCTGCAGGCTGTGCACCTGGACTTTGTCAG...GTATTTAGCCCACAGGAGATGGTGACAGCATCTCAAATGAAGCTTTGGTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGGTGACCACAGCACAATCATTAGAGCTCAAGGTGGTCTGAGTTTCCACAGATACCCTCTACTGTaGGGACACACCTGGCAACCA | + |
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Preference number: 2 (lower is better) Translates to: TPGDHSTIIRAQGGLSFHRYPLL*GHTWQP Trigger: TGGTTGCCAGGTGTGTCCCCACAGTAGAGGGTATCT...GTGGAAACTCAGACCACCTTGAGCTCTAATGATTGTGCTGTGGTCACCAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR CCA 90 bp | ACACCTGGTGACCACAGCACAATCATTAGAGCTCAAGGTGGTCTGAGTTTCCACATCCTGGTGGGAAGGTaGTTCAGAGTGGAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TPGDHSTIIRAQGGLSFHILVGR*FRVERG Trigger: TCCTCTCTCCACTCTGAACCACCTTCCCACCAGGAT...GTGGAAACTCAGACCACCTTGAGCTCTAATGATTGTGCTGTGGTCACCAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | CCTGAACGTACACCCTGGGCAAGTGCTGAGGTACAGGACAGAATGACAGTTGAACAGGGAACACCATTCTaGAAGCTTTGTGGCATCACA | + |
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Preference number: 2 (lower is better) Translates to: PERTPWASAEVQDRMTVEQGTPF*KLCGIT Trigger: TGTGATGCCACAAAGCTTTCAGAATGGTGTTCCCTG...TTCAACTGTCATTCTGTCCTGTACCTCAGCACTTGCCCAGGGTGTACGTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | ACACCTGGTGACCACAGCACAATCATTAGAGCTCAAGGTGGTCTGAGTTTCCACGCCAGGCTCCTGGGTTaGACCCTTAATTTAACAGGT | + |
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Preference number: 2 (lower is better) Translates to: TPGDHSTIIRAQGGLSFHARLLG*TLNLTG Trigger: ACCTGTTAAATTAAGGGTTCAACCCAGGAGCCTGGC...GTGGAAACTCAGACCACCTTGAGCTCTAATGATTGTGCTGTGGTCACCAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGGTGGATCTGCTATTTCTAACCCTGACCCAGGTCAGTTAAGCAAACAGGTCCTCAGAGCAGAGTaGCCTGCATCTGTGTTATCT | + |
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Preference number: 2 (lower is better) Translates to: LPGGSAISNPDPGQLSKQVLRAE*PASVLS Trigger: AGATAACACAGATGCAGGCCACTCTGCTCTGAGGAC...CTGTTTGCTTAACTGACCTGGGTCAGGGTTAGAAATAGCAGATCCACCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR TCA 90 bp | CAGAAAGTAACACTGGTTTCCTGTTCTCCAGAGACAGGGACCAGGATATGGAAGGCTGCCACAAACAGCTaGAAAGGATTAGGCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QKVTLVSCSPETGTRIWKAATNS*KGLGKR Trigger: CCTCTTGCCTAATCCTTTTCAGCTGTTTGTGGCAGC...CTTCCATATCCTGGTCCCTGTCTCTGGAGAACAGGAAACCAGTGTTACTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR-3UTR TCA 90 bp | AGACATACTAGAAGAGAGCATTGGATCCCATTACAAATGATTGTGGTTGCTGGGAGTGCTCTTAACCACTaGGCCACCTCTCCAACCCCC | + |
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Preference number: 2 (lower is better) Translates to: RHTRREHWIPLQMIVVAGSALNH*ATSPTP Trigger: GGGGGTTGGAGAGGTGGCTCAGTGGTTAAGAGCACT...CCCAGCAACCACAATCATTTGTAATGGGATCCAATGCTCTCTTCTAGTATGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACGTACACCCTGGGCAAGTGCTGAGGTACAGGACAGAATGACAGTTGAATCCCATTCTGCTCACTaGTTCTCTGTACATGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PERTPWASAEVQDRMTVESHSAH*FSVHVP Trigger: TGGAACATGTACAGAGAAGCAGTGAGCAGAATGGGA...TTCAACTGTCATTCTGTCCTGTACCTCAGCACTTGCCCAGGGTGTACGTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR-3UTR CCA 90 bp | GCATTCAGGAGGCAGAAGCTAAGGCAAATGCAGGCAGATCTCTGTGAGTTCAAGTGTAAACCCAGTAACTaGAAGGCTAAGCAGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: AFRRQKLRQMQADLCEFKCKPSN*KAKQEG Trigger: ACCCTCCTGCTTAGCCTTCCAGTTACTGGGTTTACA...CTTGAACTCACAGAGATCTGCCTGCATTTGCCTTAGCTTCTGCCTCCTGAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR CAA 90 bp | TACACCAAACCCAGCTACATATGTGACGATGTCAGGCAGGATGTGTaGAAGTACACCTGTAAACCCAGTAACTGGAAGGCTAAGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: YTKPSYICDDVRQDV*KYTCKPSNWKAKQE Trigger: CTCCTGCTTAGCCTTCCAGTTACTGGGTTTACAGGTGTACTTCAACACATCCTGCCTGACATCGTCACATATGTAGCTGGGTTTGGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| 3UTR-3UTR TCA 90 bp | ACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGTGCACTTCAGCTTATGCAGGGAAACTaGGTCCACAGAGCACCCACA | + |
|
Preference number: 2 (lower is better) Translates to: TFPFLSDWKHGLANGALQLMQGN*VHRAPT Trigger: TGTGGGTGCTCTGTGGACTCAGTTTCCCTGCATAAG...CTGAAGTGCACCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGTGCACTTCAGATAAACCACAGGACCTaGAACCCACACCTCTGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: TFPFLSDWKHGLANGALQINHRT*NPHLCG Trigger: TCCGCAGAGGTGTGGGTTGCAGGTCCTGTGGTTTAT...CTGAAGTGCACCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGCTTCAAGAAGCTCCATaGCACTGGCCTTGCAATGCC | + |
|
Preference number: 2 (lower is better) Translates to: RFHDISISFRLEAWSGKWLQEAP*HWPCNA Trigger: GGCATTGCAAGGCCAGTGTCATGGAGCTTCTTGAAG...CCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATTCAGGAGGCAGAAGCTAAGGCAAATGCAGGCAGATCTCTGTGAGTTCAAGGGATCCCATTACAAATaGTTGTGGTTGCTGGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: AFRRQKLRQMQADLCEFKGSHYK*LWLLGI Trigger: AATTCCCAGCAACCACAATCATTTGTAATGGGATCC...CTTGAACTCACAGAGATCTGCCTGCATTTGCCTTAGCTTCTGCCTCCTGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGGCAGGCAGATCTCTGTaGGTTCAAGGCCAGCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: RFHDISISFRLEAWSGKWAGRSL*VQGQPL Trigger: TAAAGGCTGGCCTTGAACTCACAGAGATCTGCCTGC...CCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGAACGTACACCCTGGGCAAGTGCTGAGGTACAGGACAGAATGACAGTTGAACTTCTGCTGTTACTATaGACAGGTTTACATGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PERTPWASAEVQDRMTVELLLLL*TGLHAR Trigger: TCTTGCATGTAAACCTGTGCATAGTAACAGCAGAAG...TTCAACTGTCATTCTGTCCTGTACCTCAGCACTTGCCCAGGGTGTACGTTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGAACTAAAGACATGTGCTACCAGCCTGACTACCATCACTATTCTAACCAAACCTCTGCGGACTTATaGAGGGAAACTGAGTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: AGTKDMCYQPDYHHYSNQTSADL*RETEST Trigger: TGTGGACTCAGTTTCCCTGCATAAGTCCGCAGAGGT...TTGGTTAGAATAGTGATGGTAGTCAGGCTGGTAGCACATGTCTTTAGTTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCACCAAAGCTTCATTTGAGATGCTGTCACCATCTCCTGTGGGCTAAATACAGCCTCCAGCACACATaGACAGTGACATATTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: MPPKLHLRCCHHLLWAKYSLQHT*TVTYSV Trigger: GACTGAATATGTCACTGTCCATGTGTGCTGGAGGCT...GTATTTAGCCCACAGGAGATGGTGACAGCATCTCAAATGAAGCTTTGGTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGAACTAAAGACATGTGCTACCAGCCTGACTACCATCACTATTCTAACCAATCAGGCAGGATGTGTTaGAGTACACCTGTAAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: AGTKDMCYQPDYHHYSNQSGRMC*STPVNP Trigger: TGGGTTTACAGGTGTACTTCAACACATCCTGCCTGA...TTGGTTAGAATAGTGATGGTAGTCAGGCTGGTAGCACATGTCTTTAGTTCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGAACTAAAGACATGTGCTACCAGCCTGACTACCATCACTATTCTAACCAATTCAGACTGGAAGCATaGTCTGGCAAATGGTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: AGTKDMCYQPDYHHYSNQFRLEA*SGKWCT Trigger: AGTGCACCATTTGCCAGACCATGCTTCCAGTCTGAA...TTGGTTAGAATAGTGATGGTAGTCAGGCTGGTAGCACATGTCTTTAGTTCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR CAA 90 bp | AAGAGAGCATTGGATCCCATTACAAATGATTGTGGTTGCTGGGAATaGAACTCAGGACCTCTGAAAGAGCAGTCAGTGCTCTTAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: KRALDPITNDCGCWE*NSGPLKEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAATCATTTGTAATGGGATCCAATGCTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGCACCAAAGCTTCATTTaGGATGCTGTCACCATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RFHDISISFRLEAWSGKWHQSFI*DAVTIS Trigger: GGAGATGGTGACAGCATCTCAAATGAAGCTTTGGTG...CCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGAACTAAAGACATGTGCTACCAGCCTGACTACCATCACTATTCTAACCAAGGAAGCAGGAGGAGATaGACATACTTCAGTAATCTG | + |
|
Preference number: 2 (lower is better) Translates to: AGTKDMCYQPDYHHYSNQGSRRR*TYFSNL Trigger: CAGATTACTGAAGTATGTTCATCTCCTCCTGCTTCC...TTGGTTAGAATAGTGATGGTAGTCAGGCTGGTAGCACATGTCTTTAGTTCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGGGAGAGACAGGGAAGTaGACAGAAAGTAACACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RFHDISISFRLEAWSGKWGETGK*TESNTG Trigger: ACCAGTGTTACTTTCTGTGCACTTCCCTGTCTCTCC...CCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGTGGGTTAGGACTTGAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTATTTAGGAATTACTCATaGATTAGGCAGACGGTCATG | + |
|
Preference number: 2 (lower is better) Translates to: PCGLGLEFSVTSHTKPQVFRNYS*IRQTVM Trigger: CATGACCGTCTGCCTAATTCATGAGTAATTCCTAAA...TACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTCAAGTCCTAACCCACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGAACTAAAGACATGTGCTACCAGCCTGACTACCATCACTATTCTAACCAAACTTACAGCTCTAAGTaGACACAAAACCTCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: AGTKDMCYQPDYHHYSNQTYSSK*TQNLQR Trigger: TCTCTGGAGGTTTTGTGTTCACTTAGAGCTGTAAGT...TTGGTTAGAATAGTGATGGTAGTCAGGCTGGTAGCACATGTCTTTAGTTCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAGGAAGTAAATCTGTATCAAGAAGCAGCACTACTTATGATGCAGAGCCAAATTCAAGGGAAGGTCTaGCTGGTCACGGACAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: IKEVNLYQEAALLMMQSQIQGKV*LVTDRV Trigger: GACTCTGTCCGTGACCAGGCAGACCTTCCCTTGAAT...TTGGCTCTGCATCATAAGTAGTGCTGCTTCTTGATACAGATTTACTTCCTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAAGTAACACTGGTTTCCTGTTCTCCAGAGACAGGGACCAGGATATGGAAGTTAGGCAAGAGGCTATaGAAAGTCAATAAAGACGAT | + |
|
Preference number: 2 (lower is better) Translates to: QKVTLVSCSPETGTRIWKLGKRL*KVNKDD Trigger: ATCGTCTTTATTGACTTTCCATAGCCTCTTGCCTAA...CTTCCATATCCTGGTCCCTGTCTCTGGAGAACAGGAAACCAGTGTTACTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGAACTAAAGACATGTGCTACCAGCCTGACTACCATCACTATTCTAACCAACCATTTCTTTCAGACTaGAAGCATGGTCTGGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: AGTKDMCYQPDYHHYSNQPFLSD*KHGLAN Trigger: ATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGG...TTGGTTAGAATAGTGATGGTAGTCAGGCTGGTAGCACATGTCTTTAGTTCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR CAA 90 bp | CCCAACTCCACAAAACAAAACAGAAAGCTGCCAATCTCCAGTGGTTaGGTAGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: PNSTKQNRKLPISSG*VGFMTFPFLSDWKH Trigger: ATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCTACCAAACCACTGGAGATTGGCAGCTTTCTGTTTTGTTTTGTGGAGTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGCAACATGCCAGTAACTaGTACTGGCGTTATAAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: RFHDISISFRLEAWSGKWQHASN*YWRYKY Trigger: GTACTTATAACGCCAGTAGCAGTTACTGGCATGTTG...CCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGAATGATTGTGGTTGCTaGGAATTGAACTCAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: RFHDISISFRLEAWSGKWNDCGC*ELNSGP Trigger: AGGTCCTGAGTTCAATTCCCAGCAACCACAATCATT...CCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTACATGCAAGAATCACCTTATTCCTGCTTAGCATAATGTTTCCTTTAACATCACTTCTTGGTGGCTaGAGCACAGCCATGAACATT | + |
|
Preference number: 2 (lower is better) Translates to: GLHARITLFLLSIMFPLTSLLGG*STAMNI Trigger: AATGTTCATGGCTGTGCTCCAGCCACCAAGAAGTGA...TGTTAAAGGAAACATTATGCTAAGCAGGAATAAGGTGATTCTTGCATGTAAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR TCA 90 bp | GAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTATATTCAAGTTGCAGATGTAGAATTATTAAGTGGTaGCCAATGGTGAACTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: EFSVTSHTKPQVYSSCRCRIIKW*PMVNSR Trigger: TCTTGAGTTCACCATTGGTCACCACTTAATAATTCT...ACATCTGCAACTTGAATATACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAGGAAGTAAATCTGTATCAAGAAGCAGCACTACTTATGATGCAGAGCCAAACACCATACTTATTATaGATCAAGAGTGGGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IKEVNLYQEAALLMMQSQTPYLL*IKSGER Trigger: CCTTTCCCCACTCTTGATGCATAATAAGTATGGTGT...TTGGCTCTGCATCATAAGTAGTGCTGCTTCTTGATACAGATTTACTTCCTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | CAGCCTTGCAGAGGCAGGTGTCCATGTTGTTCTTGCTaGGGTGCCCTGGCACTCAGGCCTCTGAGTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: QPCRGRCPCCSC*GALALRPLSPT Trigger: TGTTGGACTCAGAGGCCTGAGTGCCAGGGCACCGCAGCAAGAACAACATGGACACCTGCCTCTGCAAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200827.2 |
||
| 3UTR CCA 72 bp | CAGCTCTCCAGATCCTGGTGGGAAGGTGGTTCAGAGTaGAGAGAGGAAACGCCAGGCTCCTGGGTTGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: QLSRSWWEGGSE*REETPGSWVEP Trigger: GGGTTCAACCCAGGAGCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGGAGAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR CAA 90 bp | CCAGATCCTGGTGGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTCCTCTTGTCCACCTGCCTTaGCCTTCCAAGTGCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PDPGGKVVQSGERKRQAPLVHLP*PSKCWD Trigger: ATCCCAGCACTTGGAAGGCAAAGGCAGGTGGACAAG...AGGAGCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | CCTCGCCTCTCACAGGCTGGAGGCTCGCTCAGATCCTaGTCCAGGAAGGACACATACAGAGAAATGCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PRLSQAGGSLRS*SRKDTYREMPS Trigger: GGAAGGCATTTCTCTGTATGTGTCCTTCCTGGATCAGGATCTGAGCGAGCCTCCAGCCTGTGAGAGGCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR GCA 72 bp | CACAGGAAGGTACTGAGGTCCCGTAACCACCAGCCTTaGAGAGGCAGGTGTCCATGTTGTTCTTGCTGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: HRKVLRSRNHQP*RGRCPCCSCCG Trigger: ACCGCAGCAAGAACAACATGGACACCTGCCTCTGCAAGGCTGGTGGTTACGGGACCTCAGTACCTTCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200827.2 |
||
| 3UTR CCA 72 bp | ACCTCAAAGCAATCACTCTTGTGTGTCATGCCCCTGTaGCTGGCACGGCATGATGAAGGCAGACCTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSKQSLLCVMPL*LARHDEGRPVG Trigger: GCCCACAGGTCTGCCTTCATCATGCCGTGCCAGCCACAGGGGCATGACACACAAGAGTGATTGCTTTGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCAAAAGGAGCCTGGAATTTAGGTGCCAGCTCTCCAGATCCTGGTGGGAAGGTCAACTTCCTCACTTCTaGGTGGCTGGAGCACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AKRSLEFRCQLSRSWWEGQLPHF*VAGAQP Trigger: TGGCTGTGCTCCAGCCACCAAGAAGTGAGGAAGTTG...ACCTTCCCACCAGGATCTGGAGAGCTGGCACCTAAATTCCAGGCTCCTTTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | TGTACATGGGCAATCGGGAATCTCAATCCCTTGGACTaGCGGCAGTGTCCTCAGAGCAGAGTGGCCTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: CTWAIGNLNPLD*RQCPQSRVACI Trigger: GATGCAGGCCACTCTGCTCTGAGGACACTGCCGTCAGTCCAAGGGATTGAGATTCCCGATTGCCCATGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR CCA 72 bp | AGCCTGGAATTTAGGTGCCAGCTCTCCAGATCCTGGTaGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLEFRCQLSRSW*EGGSEWREETP Trigger: TGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGGAGAGCTGGCACCTAAATTCCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCAAAAGGAGCCTGGAATTTAGGTGCCAGCTCTCCAGATCCTGGTGGGAAGGTGGTGGTGGTAGTGGTTaGAGACAGGGTTTCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AKRSLEFRCQLSRSWWEGGGGSG*RQGFSV Trigger: CACAGAGAAACCCTGTCTCAAACCACTACCACCACC...ACCTTCCCACCAGGATCTGGAGAGCTGGCACCTAAATTCCAGGCTCCTTTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | TGCAACCCACACCTCTGCGGACTTATGCAGGGAAACTaGGTCCACAGAGCACCCACAGATCTGCATTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CNPHLCGLMQGN*VHRAPTDLHLV Trigger: CACCAAATGCAGATCTGTGGGTGCTCTGTGGACTCAGTTTCCCTGCATAAGTCCGCAGAGGTGTGGGTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | AAGACTGAGGTAGAGGGCCGAGGTAGAGACTCAGGGTaGAGGACACAGTCCAAGAAGCACAGCAACTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KTEVEGRGRDSG*RTQSKKHSNSS Trigger: ACTAGAGTTGCTGTGCTTCTTGGACTGTGTCCTGCACCCTGAGTCTCTACCTCGGCCCTCTACCTCAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR CCA 72 bp | CTAGACTGTCCACTTAGAGGGGTGCCAGTGAACTGTTaGCGGGCAGGGAACACCATTCTGAAAGCTTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LDCPLRGVPVNC*RAGNTILKALW Trigger: CCACAAAGCTTTCAGAATGGTGTTCCCTGCCCGCCAACAGTTCACTGGCACCCCTCTAAGTGGACAGTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | TCCAGGAAGGACACATACAGAGAAATGCCTTCCTACTaGGCCTGGCCAGAGCCATGTCTGAAGCTAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: SRKDTYREMPSY*AWPEPCLKLGI Trigger: GATCCCTAGCTTCAGACATGGCTCTGGCCAGGCTCAGTAGGAAGGCATTTCTCTGTATGTGTCCTTCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | AACCAAGAAATAAGGAGGAAGAAGCTGTCAGTTCCCTaGCAAAGTCCAGGTGCACAGCCTGCAGCCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NQEIRRKKLSVP*QSPGAQPAASS Trigger: GCTGGAGGCTGCAGGCTGTGCACCTGGACTTTGTCAGGGAACTGACAGCTTCTTCCTCCTTATTTCTTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR CCA 72 bp | ATCTATGTACATGGGCAATCGGGAATCTCAATCCCTTaGACTGACGGCAGTGTCCTCAGAGCAGAGTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: IYVHGQSGISIP*TDGSVLRAEWP Trigger: AGGCCACTCTGCTCTGAGGACACTGCCGTCAGTCCAAGGGATTGAGATTCCCGATTGCCCATGTACATAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR CAA 90 bp | GCATTCAGGAGGCAGAAGCTAAGGCAAATGCAGGCAGATCTCTGTGAGTTCAAGTCCATGACACTGGCCTaGCAATGCCACCAAAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: AFRRQKLRQMQADLCEFKSMTLA*QCHQSF Trigger: GAAGCTTTGGTGGCATTGCAAGGCCAGTGTCATGGA...CTTGAACTCACAGAGATCTGCCTGCATTTGCCTTAGCTTCTGCCTCCTGAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR TCA 72 bp | TTGCGCTGTTACATGAACATGGGAGATGTCTACACATaGTCTAGCTGGAGGCACTGGGACCCCTGGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LRCYMNMGDVYT*SSWRHWDPWKT Trigger: TGTCTTCCAGGGGTCCCAGTGCCTCCAGCTAGATCATGTGTAGACATCTCCCATGTTCATGTAACAGCGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | GAGCCATGTCTGAAGCTAGGGATCAGTGTAGGGCTATaGTCCTATTGGCAGCTGTACCTTAACCCAAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EPCLKLGISVGL*SYWQLYLNPRL Trigger: AAGCCTTGGGTTAAGGTACAGCTGCCAATAGGATCATAGCCCTACACTGATCCCTAGCTTCAGACATGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | TTCAGAGTGGAGAGAGGAAACGCCAGGCTCCTGGGTTaGACCCTTAATTTAACAGGTGCAGACATGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FRVERGNARLLG*TLNLTGADMSA Trigger: AGCTGACATGTCTGCACCTGTTAAATTAAGGGTTCAACCCAGGAGCCTGGCGTTTCCTCTCTCCACTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | AGGTCTGCCTGGTCACGGACAGAGTCTCAACAATCGTaGTGCTGCCACAAACAGCTGAAAAGGATTAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RSAWSRTESQQS*CCHKQLKRIRQ Trigger: TTGCCTAATCCTTTTCAGCTGTTTGTGGCAGCATCACGATTGTTGAGACTCTGTCCGTGACCAGGCAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | AATCCATACAGGATACAGACACTGCTGTCAGGGACCTaGAGTTATGACAACTGTGAAGGCGTGAGCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: NPYRIQTLLSGT*SYDNCEGVSRH Trigger: GTGTCTGCTCACGCCTTCACAGTTGTCATAACTGCAGGTCCCTGACAGCAGTGTCTGTATCCTGTATGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR CCA 72 bp | TCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATaGTGCACTTCAGGGCTAGCCGTACAAATTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SISFRLEAWSGK*CTSGLAVQIAC Trigger: GCAGGCAATTTGTACGGCTAGCCCTGAAGTGCACCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR TCA 72 bp | GTACACCCTGGGCAAGTGCTGAGGTACAGGACAGAATaGCAGTTGAAATACAGCCAGCTTTCAAATGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VHPGQVLRYRTE*QLKYSQLSNAQ Trigger: CTGAGCATTTGAAAGCTGGCTGTATTTCAACTGTCATTCTGTCCTGTACCTCAGCACTTGCCCAGGGTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | CCCTACCATGGTACTAGGAGGCGCAGCCTAAGACCATaGGAATGGCTTTTAAGAACTGTATGGTACCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PYHGTRRRSLRP*EWLLRTVWYPS Trigger: TGAAGGGTACCATACAGTTCTTAAAAGCCATTCTCATGGTCTTAGGCTGCGCCTCCTAGTACCATGGTAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | GGGAGTGTGGGAGCCATTTTTCTTCAAGAAGCTCCATaGCACTGGCCTTGCAATGCCACCAAAGCTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: GSVGAIFLQEAP*HWPCNATKASF Trigger: AAATGAAGCTTTGGTGGCATTGCAAGGCCAGTGTCATGGAGCTTCTTGAAGAAAAATGGCTCCCACACTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR TCA 72 bp | ATGGAAGCAGGAGGAGATGAACATACTTCAGTAATCTaGGCGGATAGCAAAGGGTATCTCCTGACCCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: MEAGGDEHTSVI*ADSKGYLLTLP Trigger: GGGTAGGGTCAGGAGATACCCTTTGCTATCCGCTCAGATTACTGAAGTATGTTCATCTCCTCCTGCTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | GTTACAAGCCACACAAAGCCTCAGGTATATTCAAGTTaGAGATGTCAGTTCTATCCCCAAGGCCTGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VTSHTKPQVYSS*RCQFYPQGLLS Trigger: GCTGAGCAGGCCTTGGGGATAGAACTGACATCTGCAACTTGAATATACCTGAGGCTTTGTGTGGCTTGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR GCA 72 bp | GTACCCTTGAAAGAGCATAGTATTCAAGGGAAGGTCTaGCTGGTCACGGACAGAGTCTCAACAATCGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: VPLKEHSIQGKV*LVTDRVSTIVM Trigger: CATCACGATTGTTGAGACTCTGTCCGTGACCAGGCAGACCTTCCCTTGAATACTATGCTCTTTCAAGGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | AACCTCCAGAGACCACAAACTGGAGAGACAGGGAAGTaGACAGAAAGTAACACTGGTTTCCTGTTCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NLQRPQTGETGK*TESNTGFLFSR Trigger: TCTGGAGAACAGGAAACCAGTGTTACTTTCTGTGCACTTCCCTGTCTCTCCAGTTTGTGGTCTCTGGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | ATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGTaGACTTCAGGGCTAGCCGTACAAATTGCCTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ISFRLEAWSGKW*TSGLAVQIACN Trigger: GTTGCAGGCAATTTGTACGGCTAGCCCTGAAGTGCACCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGCACATCTAACAAGCCCAGGGTCTTAGGTCCTAGTCCCAACTCCACAAAACTGAGGCAGGTACCCTaGAAAGAGCATAGTATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ECTSNKPRVLGPSPNSTKLRQVP*KEHSIQ Trigger: TTGAATACTATGCTCTTTCAAGGGTACCTGCCTCAG...TTTTGTGGAGTTGGGACTAGGACCTAAGACCCTGGGCTTGTTAGATGTGCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGCACATCTAACAAGCCCAGGGTCTTAGGTCCTAGTCCCAACTCCACAAAACCAATCTCCAGTGGTTaGGTAGGTTTCATGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: ECTSNKPRVLGPSPNSTKPISSG*VGFMTF Trigger: AAATGTCATGAAACCTACCAAACCACTGGAGATTGG...TTTTGTGGAGTTGGGACTAGGACCTAAGACCCTGGGCTTGTTAGATGTGCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR TCA 72 bp | TCTAACCCTGACCCAGGTCAGTTAAGCAAACAGATGTaGGGACAACTCCAAAAACCAAGGGAAGCATCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SNPDPGQLSKQM*GQLQKPREAST Trigger: AGTGGATGCTTCCCTTGGTTTTTGGAGTTGTCCTCACATCTGTTTGCTTAACTGACCTGGGTCAGGGTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR TCA 72 bp | ATGACACTGGCCTTGCAATGCCACCAAAGCTTCATTTaGGATGCTGTCACCATCTCCTGTGGGCTAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: MTLALQCHQSFI*DAVTISCGLNT Trigger: TGTATTTAGCCCACAGGAGATGGTGACAGCATCTCAAATGAAGCTTTGGTGGCATTGCAAGGCCAGTGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | AACCACGGAGCCACTAGGCTCCTTCTGCTGTTACTATaGACAGGTTTACATGCAAGAATCACCTTATTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NHGATRLLLLLL*TGLHARITLFL Trigger: CAGGAATAAGGTGATTCTTGCATGTAAACCTGTGCATAGTAACAGCAGAAGGAGCCTAGTGGCTCCGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR GCA 72 bp | ACTGGCCTTGCAATGCCACCAAAGCTTCATTTGAGATaGTGTCACCATCTCCTGTGGGCTAAATACACCATA | + |
|
Preference number: 3 (lower is better) Translates to: TGLAMPPKLHLR*CHHLLWAKYTI Trigger: TATGGTGTATTTAGCCCACAGGAGATGGTGACAGCATCTCAAATGAAGCTTTGGTGGCATTGCAAGGCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | TGCAGGGAAACTGAGTCCACAGAGCACCCACAGATCTaGATTTGGTGTTGGCACTTTGTAAAACTAGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: CRETESTEHPQI*IWCWHFVKLDS Trigger: AGAGTCTAGTTTTACAAAGTGCCAACACCAAATGCAGATCTGTGGGTGCTCTGTGGACTCAGTTTCCCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR CCA 72 bp | TGGCATCACAGTACAACTTCCTCACTTCTTGGTGGCTaGAGCACAGCCATGAACATTTGTGCTAAAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: WHHSTTSSLLGG*STAMNICAKEA Trigger: AGCTTCTTTAGCACAAATGTTCATGGCTGTGCTCCAGCCACCAAGAAGTGAGGAAGTTGTACTGTGATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTGGTGGATCTGCTATTTCTAACCCTGACCCAGGTCAGTTAAGCAAACAGTCAGGTATATTCAAGTaGCAGATGTCAGTTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: LPGGSAISNPDPGQLSKQSGIFK*QMSVLS Trigger: GGATAGAACTGACATCTGCAACTTGAATATACCTGA...CTGTTTGCTTAACTGACCTGGGTCAGGGTTAGAAATAGCAGATCCACCAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATGGTCTGGCAAATGGGTCAGGCAGGATGTGTaGAAGTACACCTGTAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: RFHDISISFRLEAWSGKWVRQDV*KYTCKP Trigger: GGGTTTACAGGTGTACTTCAACACATCCTGCCTGAC...CCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR CCA 72 bp | TTTCATGACATTTCCATTTCTTTCAGACTGGAAGCATaGTCTGGCAAATGGTGCACTTCAGGGCTAGCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: FHDISISFRLEA*SGKWCTSGLAV Trigger: TACGGCTAGCCCTGAAGTGCACCATTTGCCAGACCATGCTTCCAGTCTGAAAGAAATGGAAATGTCATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR TCA 72 bp | ACAGTTGAAATACAGCCAGCTTTCAAATGCTCAGTCTaGGTACAGGTCTCAGTCCTGGATCCTCCATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: TVEIQPAFKCSV*VQVSVLDPPFL Trigger: AAGAAATGGAGGATCCAGGACTGAGACCTGTACTCAGACTGAGCATTTGAAAGCTGGCTGTATTTCAACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR GCA 72 bp | TACAACATACAGAGATTCCCTTGTGAAGCCCCATCTTaGACATTGCCCTGTGGGTTAGGACTTGAATTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YNIQRFPCEAPS*TLPCGLGLEFS Trigger: AGAAAATTCAAGTCCTAACCCACAGGGCAATGTGCAAGATGGGGCTTCACAAGGGAATCTCTGTATGTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR GCA 72 bp | AGTTTCAAGAAACTGAGAATGTCCCATTCTGCTCACTaGTTCTCTGTACATGTTCCAGATCCTGTCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SFKKLRMSHSAH*FSVHVPDPVWS Trigger: ACTCCAGACAGGATCTGGAACATGTACAGAGAAGCAGTGAGCAGAATGGGACATTCTCAGTTTCTTGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR GCA 72 bp | GATTCAGATTTAACCACGGAGCCACTAGGCTCCTTCTaGTGTTACTATGCACAGGTTTACATGCAAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: DSDLTTEPLGSF*CYYAQVYMQES Trigger: TGATTCTTGCATGTAAACCTGTGCATAGTAACAGCAGAAGGAGCCTAGTGGCTCCGTGGTTAAATCTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR CCA 72 bp | AGAGCATTGGATCCCATTACAAATGATTGTGGTTGCTaGGAATTGAACTCAGGACCTCTGAAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RALDPITNDCGC*ELNSGPLKEQS Trigger: TGACTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAATCATTTGTAATGGGATCCAATGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR TCA 72 bp | GACATACTAGAAGAGAGCATTGGATCCCATTACAAATaGTTGTGGTTGCTGGGAATTGAACTCAGGACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DILEESIGSHYK*LWLLGIELRTS Trigger: AGAGGTCCTGAGTTCAATTCCCAGCAACCACAATCATTTGTAATGGGATCCAATGCTCTCTTCTAGTATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR GCA 72 bp | AGAAAGAAGTTTCAAGAAACTGAGAATGTCCCATTCTaGTCACTGCTTCTCTGTACATGTTCCAGATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RKKFQETENVPF*SLLLCTCSRSC Trigger: ACAGGATCTGGAACATGTACAGAGAAGCAGTGAGCAGAATGGGACATTCTCAGTTTCTTGAAACTTCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| 3UTR CCA 72 bp | ACTGTAGCTGTCTTCAGACATACTAGAAGAGAGCATTaGATCCCATTACAAATGATTGTGGTTGCTGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TVAVFRHTRREH*IPLQMIVVAGN Trigger: ATTCCCAGCAACCACAATCATTTGTAATGGGATCCAATGCTCTCTTCTAGTATGTCTGAAGACAGCTACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
||
| 3UTR TCA 72 bp | TTCAATGTATGTCACCCACTATTTAGGAATTACTCATaGATTAGGCAGACGGTCATGTATGAAAAGTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FNVCHPLFRNYS*IRQTVMYEKSV Trigger: TACTGACTTTTCATACATGACCGTCTGCCTAATTCATGAGTAATTCCTAAATAGTGGGTGACATACATTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR TCA 90 bp | CAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCAGCCCTGGCCTGTCCATGGCCAGCTGAGGCCTCGTaGGGTTATCCAGGGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QCEGGGEATGHPALACPWPAEAS*GYPGSV Trigger: AACTGACCCTGGATAACCTCACGAGGCCTCAGCTGG...CCATGGACAGGCCAGGGCTGGGTGTCCTGTGGCCTCACCACCACCTTCACATTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR CCA 90 bp | CCAGATCCTGGTGGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTCCTTTGGAGTGCTCTGGCTaGGGCCCAGCTTGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDPGGKVVQSGERKRQAPLECSG*GPACHP Trigger: AGGATGGCAAGCTGGGCCCCAGCCAGAGCACTCCAA...AGGAGCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR GCA 90 bp | GCCAAAAGGAGCCTGGAATTTAGGTGCCAGCTCTCCAGATCCTGGTGGGAAGGTTCTCCCCTGTTGGAGTaGTCTGGCTGGGGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKRSLEFRCQLSRSWWEGSPLLE*SGWGPA Trigger: AGCTGGGCCCCAGCCAGAGCACTCCAACAGGGGAGA...ACCTTCCCACCAGGATCTGGAGAGCTGGCACCTAAATTCCAGGCTCCTTTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR CCA 90 bp | GCTCCAAGGATGGGGTTACAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCATCCGGGCAGCGATCTTaGTGTCGATCCAGAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: APRMGLQCEGGGEATGHPSGQRS*CRSRAG Trigger: GCCTGCTCTGGATCGACACCAAGATCGCTGCCCGGA...TGGGTGTCCTGTGGCCTCACCACCACCTTCACATTGTAACCCCATCCTTGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR CCA 90 bp | CAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCAGCCCTGGCCTGTCCATGGTCCTCTATGGTGTCCTaGAGAAACTTGGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCEGGGEATGHPALACPWSSMVS*RNLASS Trigger: GGAGCTGGCCAAGTTTCTCCAGGACACCATAGAGGA...CCATGGACAGGCCAGGGCTGGGTGTCCTGTGGCCTCACCACCACCTTCACATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR TCA 90 bp | CCAGATCCTGGTGGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTCCTAGCTTGCCATCCTGTTaGGTGGTCTCCAGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PDPGGKVVQSGERKRQAPSLPSC*VVSSCV Trigger: CACACAGCTGGAGACCACTCAACAGGATGGCAAGCT...AGGAGCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAGACTGCTGGTCATAGGAGATACCCTCTACTGTGGGGACACACCTGGCGATCACATCATCCACTaGAGGCTGAGGCTCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLVIGDTLYCGDTPGDHIIH*RLRLRP Trigger: GGGCCTGAGCCTCAGCCTCCAGTGGATGATGTGATC...GCCAGGTGTGTCCCCACAGTAGAGGGTATCTCCTATGACCAGCAGTCTGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR CCA 90 bp | AGACTGCTGGTCATAGGAGATACCCTCTACTGTGGGGACACACCTGGCAACCATCCTGTTGGAGTGCTCTaGCTGGGGCCCAGCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLVIGDTLYCGDTPGNHPVGVL*LGPSLP Trigger: TGGCAAGCTGGGCCCCAGCCAGAGCACTCCAACAGG...ATGGTTGCCAGGTGTGTCCCCACAGTAGAGGGTATCTCCTATGACCAGCAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR TCA 90 bp | GCTCCAAGGATGGGGTTACAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCAATCCGTCAGGACCTCTaGGGGCAGGATCACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: APRMGLQCEGGGEATGHPIRQDL*GQDHII Trigger: GATGATGTGATCCTGCCCTCAGAGGTCCTGACGGAT...TGGGTGTCCTGTGGCCTCACCACCACCTTCACATTGTAACCCCATCCTTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR GCA 90 bp | GCTCCAAGGATGGGGTTACAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCATGTCCATGTTGTTCTTaGTGCGGTGCCCTGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: APRMGLQCEGGGEATGHPCPCCS*CGALAL Trigger: GAGTGCCAGGGCACCGCAGCAAGAACAACATGGACA...TGGGTGTCCTGTGGCCTCACCACCACCTTCACATTGTAACCCCATCCTTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR GCA 90 bp | AGCTCCAGACTGCTGGTCATAGGAGATACCCTCTACTGTGGGGACACACCTGGCCGTAACCACCAGCCTTaGAGAGGCAGGTGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLVIGDTLYCGDTPGRNHQP*RGRCPC Trigger: ACATGGACACCTGCCTCTGCAAGGCTGGTGGTTACG...GCCAGGTGTGTCCCCACAGTAGAGGGTATCTCCTATGACCAGCAGTCTGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR GCA 90 bp | AGACTGCTGGTCATAGGAGATACCCTCTACTGTGGGGACACACCTGGCAACCATAGCGGAGATGATGAGTaGCAGCCGCGCACAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLVIGDTLYCGDTPGNHSGDDE*QPRTGR Trigger: CCTTCCTGTGCGCGGCTGGCACTCATCATCTCCGCT...ATGGTTGCCAGGTGTGTCCCCACAGTAGAGGGTATCTCCTATGACCAGCAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR TCA 90 bp | TGCAGATGTCAGTTCTATCCCCAAGGCCTGCTCAGCAATGTGAATGCCCAACAGCTGCTGCACTCGCTTTaGCAGCCTCTTGCTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRCQFYPQGLLSNVNAQQLLHSL*QPLARC Trigger: GCAGCGAGCAAGAGGCTGTCAAAGCGAGTGCAGCAG...CTGTTGGGCATTCACATTGCTGAGCAGGCCTTGGGGATAGAACTGACATCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR GCA 90 bp | GCTCCAAGGATGGGGTTACAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCAGCAGGAAGTTGTTGGTaGCAATGGACTGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: APRMGLQCEGGGEATGHPAGSCW*QWTEAP Trigger: TGGAGCTTCAGTCCATTGGCACCAACAACTTCCTGC...TGGGTGTCCTGTGGCCTCACCACCACCTTCACATTGTAACCCCATCCTTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR CCA 90 bp | GCCAAAAGGAGCCTGGAATTTAGGTGCCAGCTCTCCAGATCCTGGTGGGAAGGTTGGTGGCATTCCCTTTaGCTGCCTTGTTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKRSLEFRCQLSRSWWEGWWHSL*LPCSSG Trigger: CCCTGAAGAACAAGGCAGCCAAAGGGAATGCCACCA...ACCTTCCCACCAGGATCTGGAGAGCTGGCACCTAAATTCCAGGCTCCTTTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR TCA 90 bp | CCTGAACGTACACCCTGGGCAAGTGCTGAGGTACAGGACAGAATGACAGTTGAATGGAGCAGGCGTCACTaGGGATGTCAATCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PERTPWASAEVQDRMTVEWSRRH*GCQSPP Trigger: AGGAGGAGATTGACATCCTCAGTGACGCCTGCTCCA...TTCAACTGTCATTCTGTCCTGTACCTCAGCACTTGCCCAGGGTGTACGTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR TCA 90 bp | ACACCTGGTGACCACAGCACAATCATTAGAGCTCAAGGTGGTCTGAGTTTCCACTGGTCTCCAGCTGTGTaGTCAGGCCATCGATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGDHSTIIRAQGGLSFHWSPAV*SGHRSA Trigger: GGCAGATCGATGGCCTGATCACACAGCTGGAGACCA...GTGGAAACTCAGACCACCTTGAGCTCTAATGATTGTGCTGTGGTCACCAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR GCA 90 bp | AGACTGCTGGTCATAGGAGATACCCTCTACTGTGGGGACACACCTGGCAACCATATTTCTGGAAGGGTCTaGAAGGTGGACTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLVIGDTLYCGDTPGNHISGRV*KVDFSW Trigger: CCAGCTGAAGTCCACCTTGCAGACCCTTCCAGAAAT...ATGGTTGCCAGGTGTGTCCCCACAGTAGAGGGTATCTCCTATGACCAGCAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAGACTGCTGGTCATAGGAGATACCCTCTACTGTGGGGACACACCTGGCATGCAGAGAAATCTTTaGTGGCATTCCCTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLVIGDTLYCGDTPGMQRNL*WHSLWL Trigger: CAGCCAAAGGGAATGCCACCAAAGATTTCTCTGCAT...GCCAGGTGTGTCCCCACAGTAGAGGGTATCTCCTATGACCAGCAGTCTGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGGGTTAGGACTTGAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTAGCCTCCCAGGGAGAGTaGCTTCCGCTACTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCGLGLEFSVTSHTKPQVASQGE*LPLLLA Trigger: AGCCAGAAGTAGCGGAAGCCACTCTCCCTGGGAGGC...TACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTCAAGTCCTAACCCACAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGGGTTAGGACTTGAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTACCATGTTGTTCTTGCTaGGGTGCCCTGGCACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCGLGLEFSVTSHTKPQVPCCSC*GALALR Trigger: CCTGAGTGCCAGGGCACCGCAGCAAGAACAACATGG...TACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTCAAGTCCTAACCCACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR GCA 90 bp | ACACCTGGTGACCACAGCACAATCATTAGAGCTCAAGGTGGTCTGAGTTTCCACGGCATTCCCTTTGGCTaGCTTGTTCTTCAGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TPGDHSTIIRAQGGLSFHGIPFG*LVLQGH Trigger: ATGGCCCTGAAGAACAAGGCAGCCAAAGGGAATGCC...GTGGAAACTCAGACCACCTTGAGCTCTAATGATTGTGCTGTGGTCACCAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CCA 90 bp | TGCAGATGTCAGTTCTATCCCCAAGGCCTGCTCAGCAATGTGAATGCCCAACAGCAGAGAAATCTTTGGTaGCATTCCCTTTGGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CRCQFYPQGLLSNVNAQQQRNLW*HSLWLP Trigger: AGGCAGCCAAAGGGAATGCCACCAAAGATTTCTCTG...CTGTTGGGCATTCACATTGCTGAGCAGGCCTTGGGGATAGAACTGACATCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR CAA 72 bp | GATTTGCCACTAAGAATCACCTCAAAGCAATCACTCTaGTGTGTCATGCCCCTGTGGCTGGCACGGCATGAT | + |
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Preference number: 4 (lower is better) Translates to: DLPLRITSKQSL*CVMPLWLARHD Trigger: ATCATGCCGTGCCAGCCACAGGGGCATGACACACAAGAGTGATTGCTTTGAGGTGATTCTTAGTGGCAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR TCA 90 bp | GAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTATATTCAAGTTGCAGATGTTGGCACTCAGGCCTCTaGGTCCAACAGCTGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: EFSVTSHTKPQVYSSCRCWHSGL*VQQLRG Trigger: GCCCCTCAGCTGTTGGACTCAGAGGCCTGAGTGCCA...ACATCTGCAACTTGAATATACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR GCA 90 bp | GGTTTACATGCAAGAATCACCTTATTCCTGCTTAGCATAATGTTTCCTTTAACATCCGGAGAAACTGCCTaGGCTCCCGGCGGGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLHARITLFLLSIMFPLTSGETA*APGGSA Trigger: CGCTGACCCGCCGGGAGCGCAGGCAGTTTCTCCGGA...TGTTAAAGGAAACATTATGCTAAGCAGGAATAAGGTGATTCTTGCATGTAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR GCA 90 bp | TGCAGATGTCAGTTCTATCCCCAAGGCCTGCTCAGCAATGTGAATGCCCAACAGGCTCGACATGCTGCCTaGAATTCTTTTACAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CRCQFYPQGLLSNVNAQQARHAA*NSFTVR Trigger: TCTGACTGTAAAAGAATTGCAGGCAGCATGTCGAGC...CTGTTGGGCATTCACATTGCTGAGCAGGCCTTGGGGATAGAACTGACATCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR GCA 90 bp | CCCTGTGGGTTAGGACTTGAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTACACCTGGGCCTCCTTTaGCACAATTTCTGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCGLGLEFSVTSHTKPQVHLGLL*HNFWKG Trigger: ACCCTTCCAGAAATTGTGGCAAAGGAGGCCCAGGTG...TACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTCAAGTCCTAACCCACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR CAA 72 bp | CCCAGCTACATATGTGACGATGTCAGGCAGGATGTGTaGAAGTACACCTGTAAACCCAGTAACTGGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSYICDDVRQDV*KYTCKPSNWKA Trigger: AGCCTTCCAGTTACTGGGTTTACAGGTGTACTTCAACACATCCTGCCTGACATCGTCACATATGTAGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148451.2 |
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| CDS-3UTR TCA 90 bp | ACACCTGGTGACCACAGCACAATCATTAGAGCTCAAGGTGGTCTGAGTTTCCACATTATCATCCAGGGCTaGGGTCAAACTGATGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPGDHSTIIRAQGGLSFHIIIQG*GQTDEL Trigger: AAGCTCATCAGTTTGACCTCAGCCCTGGATGATAAT...GTGGAAACTCAGACCACCTTGAGCTCTAATGATTGTGCTGTGGTCACCAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR GCA 90 bp | CTGCCTGGTGGATCTGCTATTTCTAACCCTGACCCAGGTCAGTTAAGCAAACAGCTAATTCTTCACTTCTaGGGCCTCTTTCTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPGGSAISNPDPGQLSKQLILHF*GLFLSL Trigger: AAGGCTGAGAAAGAGGCCGCAGAAGTGAAGAATTAG...CTGTTTGCTTAACTGACCTGGGTCAGGGTTAGAAATAGCAGATCCACCAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR GCA 90 bp | GAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTATATTCAAGTTGCAGATGTTTGTTCTTGCTGCGGTaGCCTGGCACTCAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFSVTSHTKPQVYSSCRCLFLLR*PGTQAS Trigger: AGAGGCCTGAGTGCCAGGGCACCGCAGCAAGAACAA...ACATCTGCAACTTGAATATACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CCA 90 bp | CTGCCTGGTGGATCTGCTATTTCTAACCCTGACCCAGGTCAGTTAAGCAAACAGGTCTCCCGGATCTTCTaGAAAAATGCAGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGGSAISNPDPGQLSKQVSRIF*KNAEKS Trigger: AGATTTCTCTGCATTTTTCCAGAAGATCCGGGAGAC...CTGTTTGCTTAACTGACCTGGGTCAGGGTTAGAAATAGCAGATCCACCAGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CCA 90 bp | GAATTTTCTGTTACAAGCCACACAAAGCCTCAGGTATATTCAAGTTGCAGATGTGAAGGGTCTGCAAGGTaGACTTCAGCTGGTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFSVTSHTKPQVYSSCRCEGSAR*TSAGQQ Trigger: CTGCTGACCAGCTGAAGTCCACCTTGCAGACCCTTC...ACATCTGCAACTTGAATATACCTGAGGCTTTGTGTGGCTTGTAACAGAAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| 3UTR CAA 72 bp | ATACAGAGATTCCCTTGTGAAGCCCCATCTTGCACATaGCCCTGTGGGTTAGGACTTGAATTTTCTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: IQRFPCEAPSCT*PCGLGLEFSVT Trigger: TGTAACAGAAAATTCAAGTCCTAACCCACAGGGCAATGTGCAAGATGGGGCTTCACAAGGGAATCTCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CCA 90 bp | GGTTTACATGCAAGAATCACCTTATTCCTGCTTAGCATAATGTTTCCTTTAACAAAGGTGGACTTCAGCTaGTCAGCAGGTGAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLHARITLFLLSIMFPLTKVDFS*SAGERV Trigger: CACCCTCTCACCTGCTGACCAGCTGAAGTCCACCTT...TGTTAAAGGAAACATTATGCTAAGCAGGAATAAGGTGATTCTTGCATGTAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | CAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCAGCCCTGGCCTGTCCATGGGCCTCCAGCTTCGCCTaGTTGTCTACCTTTTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QCEGGGEATGHPALACPWASSFA*LSTFSP Trigger: GGGCGAAAAGGTAGACAACAAGGCGAAGCTGGAGGC...CCATGGACAGGCCAGGGCTGGGTGTCCTGTGGCCTCACCACCACCTTCACATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS TCA 90 bp | GCAAGTCCAGCCACTGTTTCAGCTGGCCCTTCAGACGGTCTTCTGTaGCACCGAGAGCTCTCATGCCCCGTGCTCGACATGCTGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ASPATVSAGPSDGLL*HRELSCPVLDMLPA Trigger: TGCAGGCAGCATGTCGAGCACGGGGCATGAGAGCTCTCGGTGTCACAGAAGACCGTCTGAAGGGCCAGCTGAAACAGTGGCTGGACTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS TCA 90 bp | ACCCTTCAGACCTTCCAGTACAGGTGCCGTATCCGTCAGGACCTCTaGGGGCAGGATCACATCATCCACTGGAGGCTGAGGCTCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLQTFQYRCRIRQDL*GQDHIIHWRLRLRP Trigger: GGGCCTGAGCCTCAGCCTCCAGTGGATGATGTGATCCTGCCCTCAGAGGTCCTGACGGATACGGCACCTGTACTGGAAGGTCTGAAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | CAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCAGCCCTGGCCTGTCCATGGTCACCTGGGCCTCCTTaGCCACAATTTCTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCEGGGEATGHPALACPWSPGPP*PQFLEG Trigger: CCCTTCCAGAAATTGTGGCAAAGGAGGCCCAGGTGA...CCATGGACAGGCCAGGGCTGGGTGTCCTGTGGCCTCACCACCACCTTCACATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS CCA 90 bp | TCAGGCCCTGGCCTCCCAGGGAGAGTGGCTTCCGCTACTTCTGGCTaGATGTCCTTCACAGCCTCAGAGGCTCTCTTTAGTTCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGPGLPGRVASATSG*MSFTASEALFSSSR Trigger: CCTGGAAGAACTAAAGAGAGCCTCTGAGGCTGTGAAGGACATCCAGCCAGAAGTAGCGGAAGCCACTCTCCCTGGGAGGCCAGGGCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | GCCAAAAGGAGCCTGGAATTTAGGTGCCAGCTCTCCAGATCCTGGTGGGAAGGTATCCGGGCAGCGATCTaGGTGTCGATCCAGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKRSLEFRCQLSRSWWEGIRAAI*VSIQSR Trigger: CCTGCTCTGGATCGACACCAAGATCGCTGCCCGGAT...ACCTTCCCACCAGGATCTGGAGAGCTGGCACCTAAATTCCAGGCTCCTTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | CTCTCCAGATCCTGGTGGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTTCCCTTTGGCTGCCTaGTTCTTCAGGGCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSWWEGGSEWREETPGFPLAA*FFRAIS Trigger: GGAAATGGCCCTGAAGAACAAGGCAGCCAAAGGGAA...GCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | GCTCCAAGGATGGGGTTACAATGTGAAGGTGGTGGTGAGGCCACAGGACACCCATTGGTGGCATTCCCTTaGGCTGCCTTGTTCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: APRMGLQCEGGGEATGHPLVAFP*AALFFR Trigger: CCTGAAGAACAAGGCAGCCAAAGGGAATGCCACCAA...TGGGTGTCCTGTGGCCTCACCACCACCTTCACATTGTAACCCCATCCTTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | ACACCTGGTGACCACAGCACAATCATTAGAGCTCAAGGTGGTCTGAGTTTCCACAGGCAGGTGTCCATGTaGTTCTTGCTGCGGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TPGDHSTIIRAQGGLSFHRQVSM*FLLRCP Trigger: AGGGCACCGCAGCAAGAACAACATGGACACCTGCCT...GTGGAAACTCAGACCACCTTGAGCTCTAATGATTGTGCTGTGGTCACCAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | CCAGATCCTGGTGGGAAGGTGGTTCAGAGTGGAGAGAGGAAACGCCAGGCTCCTATGTCAATCTCCTCCTaGGTAATCTCTTCACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PDPGGKVVQSGERKRQAPMSISS*VISSPF Trigger: GAAGGGTGAAGAGATTACCAAGGAGGAGATTGACAT...AGGAGCCTGGCGTTTCCTCTCTCCACTCTGAACCACCTTCCCACCAGGATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | GCCAAAAGGAGCCTGGAATTTAGGTGCCAGCTCTCCAGATCCTGGTGGGAAGGTTTCTCAGCCTTCTCCTaGGCCTTCTCTTTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKRSLEFRCQLSRSWWEGFSAFS*AFSFSS Trigger: AGAAGAGAAAGAGAAGGCCAAGGAGAAGGCTGAGAA...ACCTTCCCACCAGGATCTGGAGAGCTGGCACCTAAATTCCAGGCTCCTTTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | CCTGAACGTACACCCTGGGCAAGTGCTGAGGTACAGGACAGAATGACAGTTGAAAATGCAGAGAAATCTTaGGTGGCATTCCCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PERTPWASAEVQDRMTVENAEKS*VAFPLA Trigger: AGCCAAAGGGAATGCCACCAAAGATTTCTCTGCATT...TTCAACTGTCATTCTGTCCTGTACCTCAGCACTTGCCCAGGGTGTACGTTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS-3UTR CAA 90 bp | GGTTTACATGCAAGAATCACCTTATTCCTGCTTAGCATAATGTTTCCTTTAACACTGAGGGGCTCACCTTaGAAGCAGAGGTACACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLHARITLFLLSIMFPLTLRGSP*KQRYTG Trigger: CCCTGTGTACCTCTGCTTCAAAGGTGAGCCCCTCAG...TGTTAAAGGAAACATTATGCTAAGCAGGAATAAGGTGATTCTTGCATGTAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS CCA 72 bp | CCCTGGCCTCCCAGGGAGAGTGGCTTCCGCTACTTCTaGCTGGATGTCCTTCACAGCCTCAGAGGCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PWPPRESGFRYF*LDVLHSLRGSL Trigger: AAGAGAGCCTCTGAGGCTGTGAAGGACATCCAGCCAGAAGTAGCGGAAGCCACTCTCCCTGGGAGGCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS TCA 72 bp | GCCACTGTTTCAGCTGGCCCTTCAGACGGTCTTCTGTaGCACCGAGAGCTCTCATGCCCCGTGCTCGACATG | + |
|
Preference number: 6 (lower is better) Translates to: ATVSAGPSDGLL*HRELSCPVLDM Trigger: CATGTCGAGCACGGGGCATGAGAGCTCTCGGTGTCACAGAAGACCGTCTGAAGGGCCAGCTGAAACAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS CCA 72 bp | GGCCTCCCAGGGAGAGTGGCTTCCGCTACTTCTGGCTaGATGTCCTTCACAGCCTCAGAGGCTCTCTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLPGRVASATSG*MSFTASEALFS Trigger: ACTAAAGAGAGCCTCTGAGGCTGTGAAGGACATCCAGCCAGAAGTAGCGGAAGCCACTCTCCCTGGGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS CCA 72 bp | GGGCTCACCTTTGAAGCAGAGGTACACAGGGTGGGCTaGAGTACAGCAACGAGACAGAACACTCTCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLTFEAEVHRVG*STATRQNTLTA Trigger: AGCCGTGAGAGTGTTCTGTCTCGTTGCTGTACTCCAGCCCACCCTGTGTACCTCTGCTTCAAAGGTGAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS GCA 72 bp | ACGGTCTTCTGTGACACCGAGAGCTCTCATGCCCCGTaGTCGACATGCTGCCTGCAATTCTTTTACAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TVFCDTESSHAP*STCCLQFFYSQ Trigger: CTGACTGTAAAAGAATTGCAGGCAGCATGTCGAGCACGGGGCATGAGAGCTCTCGGTGTCACAGAAGACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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| CDS TCA 72 bp | GATGTTGATATTGCCGTCCTTATTATCATCCAGGGCTaGGGTCAAACTGATGAGCTTGTGCTCTGGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: DVDIAVLIIIQG*GQTDELVLWNV Trigger: CACATTCCAGAGCACAAGCTCATCAGTTTGACCTCAGCCCTGGATGATAATAAGGACGGCAATATCAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005431.6 |
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