Pregenerated sensors for LEP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059201Ensembl transcript IDs: ENSMUST00000069789.12, ENSMUST00000169505.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCAGCTGTGTGTGGATGCAGCCTTCACGGTGCTCCCAAAGACTCTaGGACAGCCCAAAGGCTCTACCCATCCCTACCTCACCTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SSCVWMQPSRCSQRL*DSPKALPIPTSPLL Trigger: CAGGAGAGGTGAGGTAGGGATGGGTAGAGCCTTTGGGCTGTCTCAGAGTCTTTGGGAGCACCGTGAAGGCTGCATCCACACACAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR TCA 90 bp | ACTTCCTCAGCAGTGCTGGCCCAGGGCTCAGGACCATCTGCTAAGTaGTTTCTCATTCCCACTGGAACAAAACTCCCCACAGAATGGGTG | + |
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Preference number: 1 (lower is better) Translates to: TSSAVLAQGSGPSAK*FLIPTGTKLPTEWV Trigger: CACCCATTCTGTGGGGAGTTTTGTTCCAGTGGGAATGAGAAATCACTTAGCAGATGGTCCTGAGCCCTGGGCCAGCACTGCTGAGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 90 bp | TGGATGCTAATGTGCCCTGAAATGCGGTATGTAAATGCAATAGACTaGAAGCAGGGTTCCCCTGGGCACTGTCACCCTCAGCTCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: WMLMCPEMRYVNAID*KQGSPGHCHPQLRF Trigger: GAACCTGAGCTGAGGGTGACAGTGCCCAGGGGAACCCTGCTTGCAGTCTATTGCATTTACATACCGCATTTCAGGGCACATTAGCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR TCA 90 bp | TGCAGGCTGGCCCCTCCTTGTGCTCATGAAGTTGTGTGGATAACTTaGGTCAAGCATTGTGGAGTCATGCCTTTGGATGGGTGGTCTACA | + |
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Preference number: 1 (lower is better) Translates to: CRLAPPCAHEVVWIT*VKHCGVMPLDGWST Trigger: TGTAGACCACCCATCCAAAGGCATGACTCCACAATGCTTGACTCAAGTTATCCACACAACTTCATGAGCACAAGGAGGGGCCAGCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 90 bp | AGCTTCTCTAGCTCACAGCACCAGACAGAGCTGAGCACGAAACTGTaGTCAGTCTTAAAGTGTATTGCTTTCCATCAAGTGTCCTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: SFSSSQHQTELSTKL*SVLKCIAFHQVSSH Trigger: GTGAGAGGACACTTGATGGAAAGCAATACACTTTAAGACTGAGCACAGTTTCGTGCTCAGCTCTGTCTGGTGCTGTGAGCTAGAGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CCA 90 bp | GGAACAAAACTCCCCACAGAATGGGTGGGAGACAGGGTTCTACTTTaGATGAACCAATCAGATGAGAACCACATATTGGCATGCAAACGT | + |
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Preference number: 1 (lower is better) Translates to: GTKLPTEWVGDRVLL*MNQSDENHILACKR Trigger: ACGTTTGCATGCCAATATGTGGTTCTCATCTGATTGGTTCATCCAAAGTAGAACCCTGTCTCCCACCCATTCTGTGGGGAGTTTTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR TCA 90 bp | AGAATGGGTGGGAGACAGGGTTCTACTTTGGATGAACCAATCAGATaGGAACCACATATTGGCATGCAAACGTCTACCTGCTTAAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: RMGGRQGSTLDEPIR*EPHIGMQTSTCLRN Trigger: GTTTCTTAAGCAGGTAGACGTTTGCATGCCAATATGTGGTTCTCATCTGATTGGTTCATCCAAAGTAGAACCCTGTCTCCCACCCATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CCA 90 bp | GTCACTCTTTCCCGGTCTCTTCAGTCTTCCCTGTCACTTCCTGTTTaGACTTTCATCCCTTCAACATACCAAGTGTCCAATAAAACATCA | + |
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Preference number: 1 (lower is better) Translates to: VTLSRSLQSSLSLPV*TFIPSTYQVSNKTS Trigger: TGATGTTTTATTGGACACTTGGTATGTTGAAGGGATGAAAGTCCAAACAGGAAGTGACAGGGAAGACTGAAGAGACCGGGAAAGAGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTTGTTCATCCTCCAGCCCGAAGGGCAATTCTGGCAGCCTGGCCTGGGGCGTTTCCAGCTGTGTGTaGATGCAGCCTTCACGGTGC | + |
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Preference number: 2 (lower is better) Translates to: PLCSSSSPKGNSGSLAWGVSSCV*MQPSRC Trigger: GCACCGTGAAGGCTGCATCCACACACAGCTGGAAAC...GCCCCAGGCCAGGCTGCCAGAATTGCCCTTCGGGCTGGAGGATGAACAAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | CTCACCTCCACAGGGTATGACCTGGCTGGAAGGGCACACTTCAGGGCTGAGGATGCAATTCTGGCAGCCTaGCCTGGGGCCCTGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LTSTGYDLAGRAHFRAEDAILAA*PGALAL Trigger: AAGTGCCAGGGCCCCAGGCCAGGCTGCCAGAATTGC...ATCCTCAGCCCTGAAGTGTGCCCTTCCAGCCAGGTCATACCCTGTGGAGGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | CATCGTGTGCTGCTTGGGAGTTTCCAGCTGTGTGTGGATGCAGCCTTCACGGTGGGAGCAGGTGGGACATaGAGGGGATGGGATGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HRVLLGSFQLCVDAAFTVGAGGT*RGWDGS Trigger: AGAGCCATCCCATCCCCTCCATGTCCCACCTGCTCC...CACCGTGAAGGCTGCATCCACACACAGCTGGAAACTCCCAAGCAGCACACGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR GCA 90 bp | CTCACCTCCACAGGGTATGACCTGGCTGGAAGGGCACACTTCAGGGCTGAGGATCTATGCTCCCGGCAATaGCGCTGCAAACGTGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: LTSTGYDLAGRAHFRAEDLCSRQ*RCKRVC Trigger: GCAAACACGTTTGCAGCGGCATTGCCGGGAGCATAG...ATCCTCAGCCCTGAAGTGTGCCCTTCCAGCCAGGTCATACCCTGTGGAGGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR TCA 90 bp | CTCACCTCCACAGGGTATGACCTGGCTGGAAGGGCACACTTCAGGGCTGAGGATCTTCCTCATCCTGGCTaGCCCCCAAAGCCTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LTSTGYDLAGRAHFRAEDLPHPG*PPKPEK Trigger: TTTTTCAGGCTTTGGGGGTCAGCCAGGATGAGGAAG...ATCCTCAGCCCTGAAGTGTGCCCTTCCAGCCAGGTCATACCCTGTGGAGGTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCACGGTGCTCCCAAAGACTCTGAGACAGCCCAAAGGCTCTACCCATCCCATGCCTTTGGATGGGTaGTCTACAGGAGGGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: AFTVLPKTLRQPKGSTHPMPLDG*STGGRE Trigger: TTCTCTCCCTCCTGTAGACCACCCATCCAAAGGCAT...GGGATGGGTAGAGCCTTTGGGCTGTCTCAGAGTCTTTGGGAGCACCGTGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | GAAATGCGGTATGTAAATGCAATAGACTGCAAGCAGGGTTCCCCTGGGCACTGTGTCCCCTCTGCAGGCTaGCCCCTCCTTGTGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: EMRYVNAIDCKQGSPGHCVPSAG*PLLVLM Trigger: CATGAGCACAAGGAGGGGCCAGCCTGCAGAGGGGAC...ACAGTGCCCAGGGGAACCCTGCTTGCAGTCTATTGCATTTACATACCGCATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR TCA 90 bp | CTCACCTCCACAGGGTATGACCTGGCTGGAAGGGCACACTTCAGGGCTGAGGATCCCTCCTTGTGCTCATaGAGTTGTGTGGATAACTTG | + |
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Preference number: 2 (lower is better) Translates to: LTSTGYDLAGRAHFRAEDPSLCS*SCVDNL Trigger: CAAGTTATCCACACAACTTCATGAGCACAAGGAGGG...ATCCTCAGCCCTGAAGTGTGCCCTTCCAGCCAGGTCATACCCTGTGGAGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR GCA 90 bp | ATTCCCACTGGAACAAAACTCCCCACAGAATGGGTGGGAGACAGGGTTCTACTTCCAGCTGTGTGTGGATaGAGCCTTCACGGTGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: IPTGTKLPTEWVGDRVLLPAVCG*SLHGAP Trigger: GGGAGCACCGTGAAGGCTGCATCCACACACAGCTGG...AAGTAGAACCCTGTCTCCCACCCATTCTGTGGGGAGTTTTGTTCCAGTGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCCTTTGTTCATCCTCCAGCCCGAAGGGCAATTCTGGCAGCCTGGCCTGGCGCTGCAAACGTGTTTaGATAGAGTCAGTCACAATA | + |
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Preference number: 2 (lower is better) Translates to: KPLCSSSSPKGNSGSLAWRCKRV*IESVTI Trigger: TATTGTGACTGACTCTATGCAAACACGTTTGCAGCG...CCAGGCCAGGCTGCCAGAATTGCCCTTCGGGCTGGAGGATGAACAAAGGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCATCCTGGCTGACCCCCAAAGCCTGAAAAAGCTGATGGCTTGCTTCAGAGCTTCCATCGTGTGCTaGTTGGGAGTTTCCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FLILADPQSLKKLMACFRASIVC*LGVSSC Trigger: ACAGCTGGAAACTCCCAAGCAGCACACGATGGAAGC...TCTGAAGCAAGCCATCAGCTTTTTCAGGCTTTGGGGGTCAGCCAGGATGAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | TCTCATTCCCACTGGAACAAAACTCCCCACAGAATGGGTGGGAGACAGGGTTCTAGTCATGCCTTTGGATaGGTGGTCTACAGGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SHSHWNKTPHRMGGRQGSSHAFG*VVYRRE Trigger: CTCCCTCCTGTAGACCACCCATCCAAAGGCATGACT...AGAACCCTGTCTCCCACCCATTCTGTGGGGAGTTTTGTTCCAGTGGGAATGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | GAAATGCGGTATGTAAATGCAATAGACTGCAAGCAGGGTTCCCCTGGGCACTGTTCACTGTCTCAAATGTaGGGCCCTCACTCCCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: EMRYVNAIDCKQGSPGHCSLSQM*GPHSLS Trigger: GCTCAGGGAGTGAGGGCCCCACATTTGAGACAGTGA...ACAGTGCCCAGGGGAACCCTGCTTGCAGTCTATTGCATTTACATACCGCATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCATCCTGGCTGACCCCCAAAGCCTGAAAAAGCTGATGGCTTGCTTCAGATTTCTTCCCTCTACATaGTTCTTGGGAGCCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FLILADPQSLKKLMACFRFLPST*FLGAWW Trigger: CCACCAGGCTCCCAAGAATCATGTAGAGGGAAGAAA...TCTGAAGCAAGCCATCAGCTTTTTCAGGCTTTGGGGGTCAGCCAGGATGAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCACTGGAACAAAACTCCCCACAGAATGGGTGGGAGACAGGGTTCTACTTTCTCCTGAAGACCCCTaGAAGCCAAGGTTTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: IPTGTKLPTEWVGDRVLLSPEDP*KPRFLP Trigger: GGGAAGAAACCTTGGCTTCCAGGGGTCTTCAGGAGA...AAGTAGAACCCTGTCTCCCACCCATTCTGTGGGGAGTTTTGTTCCAGTGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTTGGACTTTCATCCCTTCAACATACCAAGTGTCCAATAAAACATCACATCCCGAAGGGCAATTCTaGCAGCCTGGCCTGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PVWTFIPSTYQVSNKTSHPEGQF*QPGLGP Trigger: GGGCCCCAGGCCAGGCTGCCAGAATTGCCCTTCGGG...ATGTGATGTTTTATTGGACACTTGGTATGTTGAAGGGATGAAAGTCCAAACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CAA 90 bp | GAAGATCCCAACCTTCCTTCCAGTCACTCAAAAATTAGGTTTGCCTaGGGCAGACCCATCAATAGGATTGAAAGCAGCACCCCAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: EDPNLPSSHSKIRFA*GRPINRIESSTPGA Trigger: GGCTCCTGGGGTGCTGCTTTCAATCCTATTGATGGGTCTGCCCAAGGCAAACCTAATTTTTGAGTGACTGGAAGGAAGGTTGGGATCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTTGGACTTTCATCCCTTCAACATACCAAGTGTCCAATAAAACATCACATGCACTTCCTCAGCAGTaGTGGCCCAGGGCTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PVWTFIPSTYQVSNKTSHALPQQ*WPRAQD Trigger: GTCCTGAGCCCTGGGCCAGCACTGCTGAGGAAGTGC...ATGTGATGTTTTATTGGACACTTGGTATGTTGAAGGGATGAAAGTCCAAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCACTGGAACAAAACTCCCCACAGAATGGGTGGGAGACAGGGTTCTACTTATGGATGTGTGCACATaGCTCTCTTCTCCTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: IPTGTKLPTEWVGDRVLLMDVCT*LSSPED Trigger: GTCTTCAGGAGAAGAGAGCCATGTGCACACATCCAT...AAGTAGAACCCTGTCTCCCACCCATTCTGTGGGGAGTTTTGTTCCAGTGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTTGGACTTTCATCCCTTCAACATACCAAGTGTCCAATAAAACATCACATCCCTCCAAGGGTGCCTaGTACACTCCAAATGTTCCG | + |
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Preference number: 2 (lower is better) Translates to: PVWTFIPSTYQVSNKTSHPSKGA*YTPNVP Trigger: CGGAACATTTGGAGTGTACCAGGCACCCTTGGAGGG...ATGTGATGTTTTATTGGACACTTGGTATGTTGAAGGGATGAAAGTCCAAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGATGAACCAATCAGATGAGAACCACATATTGGCATGCAAACGTCTACCTAAATTAGGTTTGCCTTaGGCAGACCCATCAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: LWMNQSDENHILACKRLPKLGLP*ADPSIG Trigger: TCCTATTGATGGGTCTGCCCAAGGCAAACCTAATTT...AGGTAGACGTTTGCATGCCAATATGTGGTTCTCATCTGATTGGTTCATCCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | TCACACCTGTTGAAGACAGCACTGTACTTCCAGCGGTaGGGGGCTGCTGTGGTGGAGTACACCGCCGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: SHLLKTALYFQR*GAAVVEYTAVS Trigger: ACTCACGGCGGTGTACTCCACCACAGCAGCCCCGCACCGCTGGAAGTACAGTGCTGTCTTCAACAGGTGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CCA 72 bp | GCGTGTACCCACGGAGGAACATGTACCCGGAGCAGGTaGGACATGGAGGGGATGGGATGGCTCTTATCTCTA | + |
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Preference number: 3 (lower is better) Translates to: ACTHGGTCTRSR*DMEGMGWLLSL Trigger: TAGAGATAAGAGCCATCCCATCCCCTCCATGTCCCACCTGCTCCGGGTACATGTTCCTCCGTGGGTACACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CAA 90 bp | CTCACCTCCACAGGGTATGACCTGGCTGGAAGGGCACACTTCAGGGCTGAGGATCCAGGGACCCTTTTCTaGGGGCTCACTGTCTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: LTSTGYDLAGRAHFRAEDPGTLF*GLTVSN Trigger: ATTTGAGACAGTGAGCCCCAAGAAAAGGGTCCCTGG...ATCCTCAGCCCTGAAGTGTGCCCTTCCAGCCAGGTCATACCCTGTGGAGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR TCA 72 bp | GTGTGGATGCAGCCTTCACGGTGCTCCCAAAGACTCTaGGACAGCCCAAAGGCTCTACCCATCCCTACCTCA | + |
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Preference number: 3 (lower is better) Translates to: VWMQPSRCSQRL*DSPKALPIPTS Trigger: TGAGGTAGGGATGGGTAGAGCCTTTGGGCTGTCTCAGAGTCTTTGGGAGCACCGTGAAGGCTGCATCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | TCGTGTGCTGCTTGGGAGTTTCCAGCTGTGTGTGGATaGAGCCTTCACGGTGCTCCCAAAGACTCTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: SCAAWEFPAVCG*SLHGAPKDSET Trigger: TGTCTCAGAGTCTTTGGGAGCACCGTGAAGGCTGCATCCACACACAGCTGGAAACTCCCAAGCAGCACACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CCA 72 bp | CAGCCACCACGAGCCTTCGCTCCAGACTGTGGCACGTaGGATCTTTCAGAAGCCACTTTTGTGGCCCATAAA | + |
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Preference number: 3 (lower is better) Translates to: QPPRAFAPDCGT*DLSEATFVAHK Trigger: TTTATGGGCCACAAAAGTGGCTTCTGAAAGATCCCACGTGCCACAGTCTGGAGCGAAGGCTCGTGGTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR TCA 72 bp | GCAGTGCTGGCCCAGGGCTCAGGACCATCTGCTAAGTaGTTTCTCATTCCCACTGGAACAAAACTCCCCACA | + |
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Preference number: 3 (lower is better) Translates to: AVLAQGSGPSAK*FLIPTGTKLPT Trigger: TGTGGGGAGTTTTGTTCCAGTGGGAATGAGAAATCACTTAGCAGATGGTCCTGAGCCCTGGGCCAGCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | TCTCTACTTGCTGAAGAACTAGGTGAGAGTCCCCTCTaGAGGCTGGCCCCTCCTTGTGCTCATGAAGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: SLLAEELGESPL*RLAPPCAHEVV Trigger: CACAACTTCATGAGCACAAGGAGGGGCCAGCCTGCAGAGGGGACTCTCACCTAGTTCTTCAGCAAGTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CCA 72 bp | GCTGGAAGGGCACACTTCAGGGCTGAGGATCCAGTCTaGTCCTGCAGCCTGTTTGCCATTATGGTTTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: AGRAHFRAEDPV*SCSLFAIMVLG Trigger: ACCTAAAACCATAATGGCAAACAGGCTGCAGGACCAGACTGGATCCTCAGCCCTGAAGTGTGCCCTTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | ATGTGCCCTGAAATGCGGTATGTAAATGCAATAGACTaGAAGCAGGGTTCCCCTGGGCACTGTCACCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: MCPEMRYVNAID*KQGSPGHCHPQ Trigger: CTGAGGGTGACAGTGCCCAGGGGAACCCTGCTTGCAGTCTATTGCATTTACATACCGCATTTCAGGGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CAA 90 bp | CATCGTGTGCTGCTTGGGAGTTTCCAGCTGTGTGTGGATGCAGCCTTCACGGTGAGTTGTGTGGATAACTaGAGTCAAGCATTGTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: HRVLLGSFQLCVDAAFTVSCVDN*SQALWS Trigger: ACTCCACAATGCTTGACTCAAGTTATCCACACAACT...CACCGTGAAGGCTGCATCCACACACAGCTGGAAACTCCCAAGCAGCACACGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | AGGGCACACTTCAGGGCTGAGGATCCAGTCTGGTCCTaGAGCCTGTTTGCCATTATGGTTTTAGGTATAAGC | + |
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Preference number: 3 (lower is better) Translates to: RAHFRAEDPVWS*SLFAIMVLGIS Trigger: GCTTATACCTAAAACCATAATGGCAAACAGGCTGCAGGACCAGACTGGATCCTCAGCCCTGAAGTGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CCA 72 bp | GTATGTAAATGCAATAGACTGCAAGCAGGGTTCCCCTaGGCACTGTCACCCTCAGCTCAGGTTCTTTCACAC | + |
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Preference number: 3 (lower is better) Translates to: VCKCNRLQAGFP*ALSPSAQVLSH Trigger: GTGTGAAAGAACCTGAGCTGAGGGTGACAGTGCCCAGGGGAACCCTGCTTGCAGTCTATTGCATTTACATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CCA 72 bp | ACTGTGGCACGTGGGATCTTTCAGAAGCCACTTTTGTaGCCCATAAAGTCCTCTCAGCACTTCCTGTCACTC | + |
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Preference number: 3 (lower is better) Translates to: TVARGIFQKPLL*PIKSSQHFLSL Trigger: GAGTGACAGGAAGTGCTGAGAGGACTTTATGGGCCACAAAAGTGGCTTCTGAAAGATCCCACGTGCCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR TCA 72 bp | GCCCCTCCTTGTGCTCATGAAGTTGTGTGGATAACTTaGGTCAAGCATTGTGGAGTCATGCCTTTGGATGGG | + |
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Preference number: 3 (lower is better) Translates to: APPCAHEVVWIT*VKHCGVMPLDG Trigger: CCCATCCAAAGGCATGACTCCACAATGCTTGACTCAAGTTATCCACACAACTTCATGAGCACAAGGAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR TCA 72 bp | TTTGGATGGGTGGTCTACAGGAGGGAGAGAAATGAATaGTGGATGTGTGCACATGGCTCTCTTCTCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: FGWVVYRRERNE*WMCAHGSLLLK Trigger: CTTCAGGAGAAGAGAGCCATGTGCACACATCCATCATTCATTTCTCTCCCTCCTGTAGACCACCCATCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | AAAACCAGTCACCAGAGGTCAAGCTTGAGCGCTACCTaGATAGACTCTTGTTTGGAAGATCCCAACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: KTSHQRSSLSAT*IDSCLEDPNLP Trigger: AGGAAGGTTGGGATCTTCCAAACAAGAGTCTATGCAGGTAGCGCTCAAGCTTGACCTCTGGTGACTGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | AGCCTATGCTCCCGGCAATGCCGCTGCAAACGTGTTTaGATAGAGTCAGTCACAATAGAAACAAAACCAGTC | + |
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Preference number: 3 (lower is better) Translates to: SLCSRQCRCKRV*IESVTIETKPV Trigger: GACTGGTTTTGTTTCTATTGTGACTGACTCTATGCAAACACGTTTGCAGCGGCATTGCCGGGAGCATAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | GCTGAGCACGAAACTGTGCTCAGTCTTAAAGTGTATTaGTTTCCATCAAGTGTCCTCTCACTGATCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: AEHETVLSLKVY*FPSSVLSLICP Trigger: GGGGCAGATCAGTGAGAGGACACTTGATGGAAAGCAATACACTTTAAGACTGAGCACAGTTTCGTGCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR-3UTR CAA 90 bp | CCTTCAACATACCAAGTGTCCAATAAAACATCACATCACCCCTCAGATCCTCCAGACCCATCAATAGGATaGAAAGCAGCACCCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: PSTYQVSNKTSHHPSDPPDPSIG*KAAPQE Trigger: CTCCTGGGGTGCTGCTTTCAATCCTATTGATGGGTC...TGGAGGATCTGAGGGGTGATGTGATGTTTTATTGGACACTTGGTATGTTGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCACTGGAACAAAACTCCCCACAGAATGGGTGGGAGACAGGGTTCTACTTAAAATTAGGTTTGCCTaGGGCAGACCCATCAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: IPTGTKLPTEWVGDRVLLKIRFA*GRPINR Trigger: CCTATTGATGGGTCTGCCCAAGGCAAACCTAATTTT...AAGTAGAACCCTGTCTCCCACCCATTCTGTGGGGAGTTTTGTTCCAGTGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR TCA 72 bp | GGGAGACAGGGTTCTACTTTGGATGAACCAATCAGATaGGAACCACATATTGGCATGCAAACGTCTACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRQGSTLDEPIR*EPHIGMQTSTC Trigger: GCAGGTAGACGTTTGCATGCCAATATGTGGTTCTCATCTGATTGGTTCATCCAAAGTAGAACCCTGTCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR GCA 72 bp | AGCTCACAGCACCAGACAGAGCTGAGCACGAAACTGTaGTCAGTCTTAAAGTGTATTGCTTTCCATCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSQHQTELSTKL*SVLKCIAFHQV Trigger: CACTTGATGGAAAGCAATACACTTTAAGACTGAGCACAGTTTCGTGCTCAGCTCTGTCTGGTGCTGTGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR CCA 72 bp | ACCTTCCTTCCAGTCACTCAAAAATTAGGTTTGCCTTaGGCAGACCCATCAATAGGATTGAAAGCAGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: TFLPVTQKLGLP*ADPSIGLKAAP Trigger: GGGTGCTGCTTTCAATCCTATTGATGGGTCTGCCCAAGGCAAACCTAATTTTTGAGTGACTGGAAGGAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR CCA 72 bp | TTTCTCATTCCCACTGGAACAAAACTCCCCACAGAATaGGTGGGAGACAGGGTTCTACTTTGGATGAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLIPTGTKLPTE*VGDRVLLWMNQ Trigger: TTGGTTCATCCAAAGTAGAACCCTGTCTCCCACCCATTCTGTGGGGAGTTTTGTTCCAGTGGGAATGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR CCA 72 bp | TCCCGGTCTCTTCAGTCTTCCCTGTCACTTCCTGTTTaGACTTTCATCCCTTCAACATACCAAGTGTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRSLQSSLSLPV*TFIPSTYQVSN Trigger: ATTGGACACTTGGTATGTTGAAGGGATGAAAGTCCAAACAGGAAGTGACAGGGAAGACTGAAGAGACCGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR GCA 72 bp | ACAAAGCCACACTATGTGGCCACAGAGGTAAGAAAATaGCTCACCCTTTCAGAAAAGCCTACCACACATATG | + |
|
Preference number: 3 (lower is better) Translates to: TKPHYVATEVRK*LTLSEKPTTHM Trigger: CATATGTGTGGTAGGCTTTTCTGAAAGGGTGAGGCATTTTCTTACCTCTGTGGCCACATAGTGTGGCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR TCA 72 bp | CTCTACCCTCAGGTGCACATAGATACATATTACACTTaGCAAAATTCATCTGCTTTTGATAATAACCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LYPQVHIDTYYT*QNSSAFDNNLA Trigger: GGCTAGGTTATTATCAAAAGCAGATGAATTTTGTCAAGTGTAATATGTATCTATGTGCACCTGAGGGTAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR TCA 72 bp | TTCAAGCAGTGTCTATACGGTATTATGAAATATAAATaGACTTCATGTTTATACTTGGGCCCCATCCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FKQCLYGIMKYK*TSCLYLGPIPK Trigger: CTTGGGGATGGGGCCCAAGTATAAACATGAAGTTCATTTATATTTCATAATACCGTATAGACACTGCTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR CCA 90 bp | CCCCTTTGTTCATCCTCCAGCCCGAAGGGCAATTCTGGCAGCCTGGCCTGGGGCGCCATCCAGGCTCTCTaGCTTCTGCAGGCCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLCSSSSPKGNSGSLAWGAIQAL*LLQATG Trigger: ACCAGTGGCCTGCAGAAGCCAGAGAGCCTGGATGGC...GCCCCAGGCCAGGCTGCCAGAATTGCCCTTCGGGCTGGAGGATGAACAAAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR TCA 90 bp | CTCACCTCCACAGGGTATGACCTGGCTGGAAGGGCACACTTCAGGGCTGAGGATCTCTGTGGAGTAGAGTaGGGCTTCCAGGACGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LTSTGYDLAGRAHFRAEDLCGVE*GFQDAI Trigger: GATGGCGTCCTGGAAGCCTCACTCTACTCCACAGAG...ATCCTCAGCCCTGAAGTGTGCCCTTCCAGCCAGGTCATACCCTGTGGAGGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR TCA 90 bp | CCCCTTTGTTCATCCTCCAGCCCGAAGGGCAATTCTGGCAGCCTGGCCTGGGGCTACCGACTGCGTGTGTaGAATGTCATTGATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLCSSSSPKGNSGSLAWGYRLRV*NVIDPG Trigger: ACCAGGATCAATGACATTTCACACACGCAGTCGGTA...GCCCCAGGCCAGGCTGCCAGAATTGCCCTTCGGGCTGGAGGATGAACAAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR TCA 90 bp | CATCGTGTGCTGCTTGGGAGTTTCCAGCTGTGTGTGGATGCAGCCTTCACGGTGGGGAAGGCAGGCTGGTaGGGACCTGTTGATAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HRVLLGSFQLCVDAAFTVGKAGW*GPVDRL Trigger: CAGTCTATCAACAGGTCCTCACCAGCCTGCCTTCCC...CACCGTGAAGGCTGCATCCACACACAGCTGGAAACTCCCAAGCAGCACACGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| 3UTR CAA 72 bp | GCACTGTCACCCTCAGCTCAGGTTCTTTCACACCTGTaGAAGACAGCACTGTACTTCCAGCGGTGCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSPSAQVLSHL*KTALYFQRCGA Trigger: AGCCCCGCACCGCTGGAAGTACAGTGCTGTCTTCAACAGGTGTGAAAGAACCTGAGCTGAGGGTGACAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR TCA 90 bp | AATAAGTGCTTCCATCGTGTGCTGCTTGGGAGTTTCCAGCTGTGTGTGGATGCATGCAGGCCACTGGTCTaGGGCAGGGAGCAGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKCFHRVLLGSFQLCVDACRPLV*GREQLL Trigger: CAAGAGCTGCTCCCTGCCTCAGACCAGTGGCCTGCA...TGCATCCACACACAGCTGGAAACTCCCAAGCAGCACACGATGGAAGCACTTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR TCA 90 bp | TCTCTACTTGCTGAAGAACTAGGTGAGAGTCCCCTCTGCAGGCTGGCCCCTCCTAAACTCAGAATGGGGTaGAGCCCAGGAATGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLAEELGESPLCRLAPPKLRMG*SPGMKS Trigger: GGACTTCATTCCTGGGCTTCACCCCATTCTGAGTTT...AGGAGGGGCCAGCCTGCAGAGGGGACTCTCACCTAGTTCTTCAGCAAGTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS-3UTR CCA 90 bp | TTCCTCATCCTGGCTGACCCCCAAAGCCTGAAAAAGCTGATGGCTTGCTTCAGAGCAGGGAGCAGCTCTTaGAGAAGGCCAGCAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLILADPQSLKKLMACFRAGSSS*RRPADG Trigger: TCCATCTGCTGGCCTTCTCCAAGAGCTGCTCCCTGC...TCTGAAGCAAGCCATCAGCTTTTTCAGGCTTTGGGGGTCAGCCAGGATGAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS-3UTR CCA 90 bp | CTCACCTCCACAGGGTATGACCTGGCTGGAAGGGCACACTTCAGGGCTGAGGATGTTTTGGTGTCATCCTaGACTTTCTGGATAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LTSTGYDLAGRAHFRAEDVLVSS*TFWIGT Trigger: AGTGCCTATCCAGAAAGTCCAGGATGACACCAAAAC...ATCCTCAGCCCTGAAGTGTGCCCTTCCAGCCAGGTCATACCCTGTGGAGGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR CCA 90 bp | ATCGTGTGCTGCTTGGGAGTTTCCAGCTGTGTGTGGATGCAGCCTTCACGGTGCGAGTCTGGTCCATCTTaGACAAACTCAGAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVCCLGVSSCVWMQPSRCESGPS*TNSEWG Trigger: ACCCCATTCTGAGTTTGTCCAAGATGGACCAGACTC...GCACCGTGAAGGCTGCATCCACACACAGCTGGAAACTCCCAAGCAGCACACGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR CCA 90 bp | GCCTTCACGGTGCTCCCAAAGACTCTGAGACAGCCCAAAGGCTCTACCCATCCCGATTCTCCAGGTCATTaGCTATCTGCAGCACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: AFTVLPKTLRQPKGSTHPDSPGH*LSAAHF Trigger: AAAATGTGCTGCAGATAGCCAATGACCTGGAGAATC...GGGATGGGTAGAGCCTTTGGGCTGTCTCAGAGTCTTTGGGAGCACCGTGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS-3UTR CCA 90 bp | CCTTCAACATACCAAGTGTCCAATAAAACATCACATCACCCCTCAGATCCTCCAGCTTCTGCAGGCCACTaGTCTGAGGCAGGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSTYQVSNKTSHHPSDPPASAGH*SEAGSS Trigger: GCTGCTCCCTGCCTCAGACCAGTGGCCTGCAGAAGC...TGGAGGATCTGAGGGGTGATGTGATGTTTTATTGGACACTTGGTATGTTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR CCA 90 bp | GAAATGCGGTATGTAAATGCAATAGACTGCAAGCAGGGTTCCCCTGGGCACTGTATCTGCAGCACATTTTaGGAAGGCAGGCTGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EMRYVNAIDCKQGSPGHCICSTF*EGRLVR Trigger: CCTCACCAGCCTGCCTTCCCAAAATGTGCTGCAGAT...ACAGTGCCCAGGGGAACCCTGCTTGCAGTCTATTGCATTTACATACCGCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS-3UTR CCA 90 bp | CACTTCCTGTCACTCTTTCCCGGTCTCTTCAGTCTTCCCTGTCACTTCCTGTTTAAGCCACCACCTCTGTaGAGTAGAGTGAGGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFLSLFPGLFSLPCHFLFKPPPL*SRVRLP Trigger: TGGAAGCCTCACTCTACTCCACAGAGGTGGTGGCTT...AAACAGGAAGTGACAGGGAAGACTGAAGAGACCGGGAAAGAGTGACAGGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CAA 72 bp | AAATTAGGTTTGCCTTGGGCAGACCCATCAATAGGATaGAAAGCAGCACCCCAGGAGCCTTCCTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGLPWADPSIG*KAAPQEPSSSW Trigger: CCAGGATGAGGAAGGCTCCTGGGGTGCTGCTTTCAATCCTATTGATGGGTCTGCCCAAGGCAAACCTAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CAA 72 bp | TTCCCGGTCTCTTCAGTCTTCCCTGTCACTTCCTGTTaGGACTTTCATCCCTTCAACATACCAAGTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPVSSVFPVTSC*DFHPFNIPSVQ Trigger: TTGGACACTTGGTATGTTGAAGGGATGAAAGTCCAAACAGGAAGTGACAGGGAAGACTGAAGAGACCGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| 3UTR CAA 72 bp | AACCTTCCTTCCAGTCACTCAAAAATTAGGTTTGCCTaGGGCAGACCCATCAATAGGATTGAAAGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLPSSHSKIRFA*GRPINRIESST Trigger: GGTGCTGCTTTCAATCCTATTGATGGGTCTGCCCAAGGCAAACCTAATTTTTGAGTGACTGGAAGGAAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS-3UTR GCA 90 bp | CTTTGGATGAACCAATCAGATGAGAACCACATATTGGCATGCAAACGTCTACCTGACCTGTTGATAGACTaGCAGAGTCTGGTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWMNQSDENHILACKRLPDLLID*QSLVHL Trigger: AAGATGGACCAGACTCTGGCAGTCTATCAACAGGTC...AGGTAGACGTTTGCATGCCAATATGTGGTTCTCATCTGATTGGTTCATCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS TCA 90 bp | AGAGCCCTGCAGCCTGCTCAAAGCCACCACCTCTGTGGAGTAGAGTaGGGCTTCCAGGACGCCATCCAGGCTCTCTGGCTTCTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RALQPAQSHHLCGVE*GFQDAIQALWLLQA Trigger: GGCCTGCAGAAGCCAGAGAGCCTGGATGGCGTCCTGGAAGCCTCACTCTACTCCACAGAGGTGGTGGCTTTGAGCAGGCTGCAGGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS CCA 90 bp | AGGCTTCCAGGACGCCATCCAGGCTCTCTGGCTTCTGCAGGCCACTaGTCTGAGGCAGGGAGCAGCTCTTGGAGAAGGCCAGCAGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLPGRHPGSLASAGH*SEAGSSSWRRPADG Trigger: TCCATCTGCTGGCCTTCTCCAAGAGCTGCTCCCTGCCTCAGACCAGTGGCCTGCAGAAGCCAGAGAGCCTGGATGGCGTCCTGGAAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS CCA 90 bp | TGTCCTGCAGAGAGCCCTGCAGCCTGCTCAAAGCCACCACCTCTGTaGAGTAGAGTGAGGCTTCCAGGACGCCATCCAGGCTCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPAESPAACSKPPPL*SRVRLPGRHPGSLA Trigger: AGCCAGAGAGCCTGGATGGCGTCCTGGAAGCCTCACTCTACTCCACAGAGGTGGTGGCTTTGAGCAGGCTGCAGGGCTCTCTGCAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS CCA 90 bp | TCTCTGGCTTCTGCAGGCCACTGGTCTGAGGCAGGGAGCAGCTCTTaGAGAAGGCCAGCAGATGGAGGAGGTCTCGGAGATTCTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLASAGHWSEAGSSS*RRPADGGGLGDSPG Trigger: ACCTGGAGAATCTCCGAGACCTCCTCCATCTGCTGGCCTTCTCCAAGAGCTGCTCCCTGCCTCAGACCAGTGGCCTGCAGAAGCCAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS-3UTR CAA 90 bp | CCCCTTTGTTCATCCTCCAGCCCGAAGGGCAATTCTGGCAGCCTGGCCTGGGGCTATCTGCAGCACATTTaGGGAAGGCAGGCTGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLCSSSSPKGNSGSLAWGYLQHI*GRQAGE Trigger: CTCACCAGCCTGCCTTCCCAAAATGTGCTGCAGATA...GCCCCAGGCCAGGCTGCCAGAATTGCCCTTCGGGCTGGAGGATGAACAAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS-3UTR CAA 90 bp | CCCCTTTGTTCATCCTCCAGCCCGAAGGGCAATTCTGGCAGCCTGGCCTGGGGCGTGTGTGAAATGTCATaGATCCTGGTGACAATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLCSSSSPKGNSGSLAWGVCEMS*ILVTMV Trigger: GACCATTGTCACCAGGATCAATGACATTTCACACAC...GCCCCAGGCCAGGCTGCCAGAATTGCCCTTCGGGCTGGAGGATGAACAAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS-3UTR CAA 90 bp | GAAATGCGGTATGTAAATGCAATAGACTGCAAGCAGGGTTCCCCTGGGCACTGTGGCAGGGAGCAGCTCTaGGAGAAGGCCAGCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: EMRYVNAIDCKQGSPGHCGREQL*EKASRW Trigger: CCATCTGCTGGCCTTCTCCAAGAGCTGCTCCCTGCC...ACAGTGCCCAGGGGAACCCTGCTTGCAGTCTATTGCATTTACATACCGCATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS TCA 90 bp | CCAGGTCATTGGCTATCTGCAGCACATTTTGGGAAGGCAGGCTGGTaGGGACCTGTTGATAGACTGCCAGAGTCTGGTCCATCTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PGHWLSAAHFGKAGW*GPVDRLPESGPSWT Trigger: TGTCCAAGATGGACCAGACTCTGGCAGTCTATCAACAGGTCCTCACCAGCCTGCCTTCCCAAAATGTGCTGCAGATAGCCAATGACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS GCA 90 bp | CAGCACATTTTGGGAAGGCAGGCTGGTGAGGACCTGTTGATAGACTaGCAGAGTCTGGTCCATCTTGGACAAACTCAGAATGGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QHILGRQAGEDLLID*QSLVHLGQTQNGVK Trigger: CTTCACCCCATTCTGAGTTTGTCCAAGATGGACCAGACTCTGGCAGTCTATCAACAGGTCCTCACCAGCCTGCCTTCCCAAAATGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS-3UTR CAA 90 bp | AGGAACATGTACCCGGAGCAGGTGGGACATGGAGGGGATGGGATGGCTCTTATCGCTAACATCCAACTGTaGAAGAATGTCCTGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RNMYPEQVGHGGDGMALIANIQL*KNVLQR Trigger: TCTCTGCAGGACATTCTTCAACAGTTGGATGTTAGC...GATAAGAGCCATCCCATCCCCTCCATGTCCCACCTGCTCCGGGTACATGTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS TCA 90 bp | GTCCAAGCCAGTGACCCTCTGCTTGGCGGATACCGACTGCGTGTGTaGAATGTCATTGATCCTGGTGACAATGGTCTTGATGAGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VQASDPLLGGYRLRV*NVIDPGDNGLDEGF Trigger: AAAACCCTCATCAAGACCATTGTCACCAGGATCAATGACATTTCACACACGCAGTCGGTATCCGCCAAGCAGAGGGTCACTGGCTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS-3UTR CAA 90 bp | CACTTCCTGTCACTCTTTCCCGGTCTCTTCAGTCTTCCCTGTCACTTCCTGTTTAGAGTCTGGTCCATCTaGGACAAACTCAGAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HFLSLFPGLFSLPCHFLFRVWSI*DKLRMG Trigger: CCCCATTCTGAGTTTGTCCAAGATGGACCAGACTCT...AAACAGGAAGTGACAGGGAAGACTGAAGAGACCGGGAAAGAGTGACAGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS GCA 90 bp | CTTGATGAGGGTTTTGGTGTCATCCTGGACTTTCTGGATAGGCACTaGTTGAACATAAGACAGATAGGACCAAAGCCACAGGAACCGACA | + |
|
Preference number: 5 (lower is better) Translates to: LDEGFGVILDFLDRH*LNIRQIGPKPQEPT Trigger: TGTCGGTTCCTGTGGCTTTGGTCCTATCTGTCTTATGTTCAAGCAGTGCCTATCCAGAAAGTCCAGGATGACACCAAAACCCTCATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCAACATACCAAGTGTCCAATAAAACATCACATCACCCCTCAGATCCTCCAGTCTTGATGAGGGTTTaGGTGTCATCCTGGACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSTYQVSNKTSHHPSDPPVLMRV*VSSWTF Trigger: GAAAGTCCAGGATGACACCAAAACCCTCATCAAGAC...TGGAGGATCTGAGGGGTGATGTGATGTTTTATTGGACACTTGGTATGTTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR CAA 90 bp | CCTGTTTGGACTTTCATCCCTTCAACATACCAAGTGTCCAATAAAACATCACATGCTGGTGAGGACCTGTaGATAGACTGCCAGAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVWTFIPSTYQVSNKTSHAGEDL*IDCQSL Trigger: CAGACTCTGGCAGTCTATCAACAGGTCCTCACCAGC...ATGTGATGTTTTATTGGACACTTGGTATGTTGAAGGGATGAAAGTCCAAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCTACCACACATATGTAATTCAGAGAACACTTCCGGATCCTTCACCCTCCTGGATAGGCACTGCTaGAACATAAGACAGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KSLPHICNSENTSGSFTLLDRHC*NIRQIG Trigger: TCCTATCTGTCTTATGTTCAAGCAGTGCCTATCCAG...GAGGGTGAAGGATCCGGAAGTGTTCTCTGAATTACATATGTGTGGTAGGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS CCA 72 bp | GGACGCCATCCAGGCTCTCTGGCTTCTGCAGGCCACTaGTCTGAGGCAGGGAGCAGCTCTTGGAGAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRHPGSLASAGH*SEAGSSSWRRP Trigger: TGGCCTTCTCCAAGAGCTGCTCCCTGCCTCAGACCAGTGGCCTGCAGAAGCCAGAGAGCCTGGATGGCGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS CCA 72 bp | GAGAGCCCTGCAGCCTGCTCAAAGCCACCACCTCTGTaGAGTAGAGTGAGGCTTCCAGGACGCCATCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESPAACSKPPPL*SRVRLPGRHPG Trigger: GCCTGGATGGCGTCCTGGAAGCCTCACTCTACTCCACAGAGGTGGTGGCTTTGAGCAGGCTGCAGGGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS TCA 72 bp | CAGCCTGCTCAAAGCCACCACCTCTGTGGAGTAGAGTaGGGCTTCCAGGACGCCATCCAGGCTCTCTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QPAQSHHLCGVE*GFQDAIQALWL Trigger: AAGCCAGAGAGCCTGGATGGCGTCCTGGAAGCCTCACTCTACTCCACAGAGGTGGTGGCTTTGAGCAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS CAA 90 bp | GAGAAGGCCAGCAGATGGAGGAGGTCTCGGAGATTCTCCAGGTCATaGGCTATCTGCAGCACATTTTGGGAAGGCAGGCTGGTGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: EKASRWRRSRRFSRS*AICSTFWEGRLVRT Trigger: GGTCCTCACCAGCCTGCCTTCCCAAAATGTGCTGCAGATAGCCAATGACCTGGAGAATCTCCGAGACCTCCTCCATCTGCTGGCCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
||
| CDS GCA 72 bp | ACTGTTGAAGAATGTCCTGCAGAGAGCCCTGCAGCCTaGTCAAAGCCACCACCTCTGTGGAGTAGAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TVEECPAESPAA*SKPPPLWSRVR Trigger: CCTCACTCTACTCCACAGAGGTGGTGGCTTTGAGCAGGCTGCAGGGCTCTCTGCAGGACATTCTTCAACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS CCA 72 bp | GCAGATGGAGGAGGTCTCGGAGATTCTCCAGGTCATTaGCTATCTGCAGCACATTTTGGGAAGGCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ADGGGLGDSPGH*LSAAHFGKAGW Trigger: CCAGCCTGCCTTCCCAAAATGTGCTGCAGATAGCCAATGACCTGGAGAATCTCCGAGACCTCCTCCATCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS TCA 72 bp | TGGCTATCTGCAGCACATTTTGGGAAGGCAGGCTGGTaGGGACCTGTTGATAGACTGCCAGAGTCTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WLSAAHFGKAGW*GPVDRLPESGP Trigger: TGGACCAGACTCTGGCAGTCTATCAACAGGTCCTCACCAGCCTGCCTTCCCAAAATGTGCTGCAGATAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS CAA 72 bp | AGCCCAGGAATGAAGTCCAAGCCAGTGACCCTCTGCTaGGCGGATACCGACTGCGTGTGTGAAATGTCATTG | + |
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Preference number: 6 (lower is better) Translates to: SPGMKSKPVTLC*ADTDCVCEMSL Trigger: CAATGACATTTCACACACGCAGTCGGTATCCGCCAAGCAGAGGGTCACTGGCTTGGACTTCATTCCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS CAA 72 bp | AGCAGATGGAGGAGGTCTCGGAGATTCTCCAGGTCATaGGCTATCTGCAGCACATTTTGGGAAGGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SRWRRSRRFSRS*AICSTFWEGRL Trigger: CAGCCTGCCTTCCCAAAATGTGCTGCAGATAGCCAATGACCTGGAGAATCTCCGAGACCTCCTCCATCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS CAA 90 bp | GAGGTCTCGGAGATTCTCCAGGTCATTGGCTATCTGCAGCACATTTaGGGAAGGCAGGCTGGTGAGGACCTGTTGATAGACTGCCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: EVSEILQVIGYLQHI*GRQAGEDLLIDCQS Trigger: ACTCTGGCAGTCTATCAACAGGTCCTCACCAGCCTGCCTTCCCAAAATGTGCTGCAGATAGCCAATGACCTGGAGAATCTCCGAGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069789.12 |
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| CDS GCA 72 bp | TCCAAGCCAGTGACCCTCTGCTTGGCGGATACCGACTaGGTGTGTGAAATGTCATTGATCCTGGTGACAATG | + |
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Preference number: 6 (lower is better) Translates to: SKPVTLCLADTD*VCEMSLILVTM Trigger: CATTGTCACCAGGATCAATGACATTTCACACACGCAGTCGGTATCCGCCAAGCAGAGGGTCACTGGCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS CAA 72 bp | CAGCACATTTTGGGAAGGCAGGCTGGTGAGGACCTGTaGATAGACTGCCAGAGTCTGGTCCATCTTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: QHILGRQAGEDL*IDCQSLVHLGQ Trigger: TTGTCCAAGATGGACCAGACTCTGGCAGTCTATCAACAGGTCCTCACCAGCCTGCCTTCCCAAAATGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS CAA 90 bp | GTGACCCTCTGCTTGGCGGATACCGACTGCGTGTGTGAAATGTCATaGATCCTGGTGACAATGGTCTTGATGAGGGTTTTGGTGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: VTLCLADTDCVCEMS*ILVTMVLMRVLVSS Trigger: GGATGACACCAAAACCCTCATCAAGACCATTGTCACCAGGATCAATGACATTTCACACACGCAGTCGGTATCCGCCAAGCAGAGGGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS CAA 90 bp | GGCTATCTGCAGCACATTTTGGGAAGGCAGGCTGGTGAGGACCTGTaGATAGACTGCCAGAGTCTGGTCCATCTTGGACAAACTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: GYLQHILGRQAGEDL*IDCQSLVHLGQTQN Trigger: ATTCTGAGTTTGTCCAAGATGGACCAGACTCTGGCAGTCTATCAACAGGTCCTCACCAGCCTGCCTTCCCAAAATGTGCTGCAGATAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS GCA 72 bp | TTGGGAAGGCAGGCTGGTGAGGACCTGTTGATAGACTaGCAGAGTCTGGTCCATCTTGGACAAACTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LGRQAGEDLLID*QSLVHLGQTQN Trigger: ATTCTGAGTTTGTCCAAGATGGACCAGACTCTGGCAGTCTATCAACAGGTCCTCACCAGCCTGCCTTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS TCA 72 bp | AGTGACCCTCTGCTTGGCGGATACCGACTGCGTGTGTaGAATGTCATTGATCCTGGTGACAATGGTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SDPLLGGYRLRV*NVIDPGDNGLD Trigger: ATCAAGACCATTGTCACCAGGATCAATGACATTTCACACACGCAGTCGGTATCCGCCAAGCAGAGGGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS CAA 90 bp | GATGAGGGTTTTGGTGTCATCCTGGACTTTCTGGATAGGCACTGCTaGAACATAAGACAGATAGGACCAAAGCCACAGGAACCGACACAG | + |
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Preference number: 6 (lower is better) Translates to: DEGFGVILDFLDRHC*NIRQIGPKPQEPTQ Trigger: CTGTGTCGGTTCCTGTGGCTTTGGTCCTATCTGTCTTATGTTCAAGCAGTGCCTATCCAGAAAGTCCAGGATGACACCAAAACCCTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS CAA 72 bp | TGCTTGGCGGATACCGACTGCGTGTGTGAAATGTCATaGATCCTGGTGACAATGGTCTTGATGAGGGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CLADTDCVCEMS*ILVTMVLMRVL Trigger: CAAAACCCTCATCAAGACCATTGTCACCAGGATCAATGACATTTCACACACGCAGTCGGTATCCGCCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS CAA 90 bp | ACCGACTGCGTGTGTGAAATGTCATTGATCCTGGTGACAATGGTCTaGATGAGGGTTTTGGTGTCATCCTGGACTTTCTGGATAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: TDCVCEMSLILVTMV*MRVLVSSWTFWIGT Trigger: AGTGCCTATCCAGAAAGTCCAGGATGACACCAAAACCCTCATCAAGACCATTGTCACCAGGATCAATGACATTTCACACACGCAGTCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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| CDS GCA 72 bp | GGTTTTGGTGTCATCCTGGACTTTCTGGATAGGCACTaGTTGAACATAAGACAGATAGGACCAAAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: GFGVILDFLDRH*LNIRQIGPKPQ Trigger: CTGTGGCTTTGGTCCTATCTGTCTTATGTTCAAGCAGTGCCTATCCAGAAAGTCCAGGATGACACCAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069789.12 ENSMUST00000169505.2 |
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