Pregenerated sensors for LENG9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043432Ensembl transcript IDs: ENSMUST00000058358.8
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTTCTGCCATGTAACTGGAGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCGCGAGAACCTGTTTCTaGTTGGCCTGTTTTATCCGA | + |
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Preference number: 2 (lower is better) Translates to: LLPCNWRMCYEVANSWTVARTCF*LACFIR Trigger: TCGGATAAAACAGGCCAAGCAGAAACAGGTTCTCGC...GACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGTTACATGGCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| 3UTR GCA 72 bp | TTACCCCTCCCCCTTCTGCCATGTAACTGGAGGATGTaGTATGAGGTTGCAAACAGCTGGACTGTCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LPLPLLPCNWRM*YEVANSWTVRL Trigger: CAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGTTACATGGCAGAAGGGGGAGGGGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| 3UTR CCA 72 bp | TGTAACTGGAGGATGTGCTATGAGGTTGCAAACAGCTaGACTGTCAGGCTGCTTTTTCCCAGATGCCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: CNWRMCYEVANS*TVRLLFPRCLP Trigger: AGGGAGGCATCTGGGAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| 3UTR-3UTR CAA 90 bp | GCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCCAGATGCCTCCCTTCCTTCATTCTCCTaGAGCATTGAGTACAGTACA | + |
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Preference number: 3 (lower is better) Translates to: AMRLQTAGLSGCFFPDASLPSFS*SIEYST Trigger: TGTACTGTACTCAATGCTCAAGGAGAATGAAGGAAG...GGAGGCATCTGGGAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | CAGGCTGCTTTTTCCCAGATGCCTCCCTGCCTCCCTCCCTCCCTCTCCCCTCCCGTGTGGGGGAGGGTGTaGCACAGAGCACATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: QAAFSQMPPCLPPSLSPPVWGRV*HRAHDG Trigger: GCCATCATGTGCTCTGTGCCACACCCTCCCCCACAC...GGGAGGGGAGAGGGAGGGAGGGAGGCAGGGAGGCATCTGGGAAAAAGCAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | CAGGCTGCTTTTTCCCAGATGCCTCCCTGCCTCCCTCCCTCCCTCTCCCCTCCCCCATACCTGTCAGTGTaGGGGAGGGTGTGGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: QAAFSQMPPCLPPSLSPPPYLSV*GRVWHR Trigger: TCTGTGCCACACCCTCCCCCACACTGACAGGTATGG...GGGAGGGGAGAGGGAGGGAGGGAGGCAGGGAGGCATCTGGGAAAAAGCAGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR GCA 90 bp | AACTGGAGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTGCCAGGTCCGAGCGCTaGCAGCGGCTCGTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NWRMCYEVANSWTVRLLFARSER*QRLVPA Trigger: TGCTGGGACGAGCCGCTGGCAGCGCTCGGACCTGGC...AAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCATGTAACTGGAGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCGTGCCACAAAATGTGTaGGCCGGGGCTGGCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LLPCNWRMCYEVANSWTVVPQNV*AGAGEG Trigger: CCCCTCGCCAGCCCCGGCCCACACATTTTGTGGCAC...GACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGTTACATGGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR GCA 90 bp | GCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCCAGATGCCTCCCAAGTGCAGGGCCTGTaGTGGTACCAGGAACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AMRLQTAGLSGCFFPDASQVQGL*WYQELS Trigger: GCTGAGTTCCTGGTACCAGCACAGGCCCTGCACTTG...GGAGGCATCTGGGAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR GCA 90 bp | AGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCCAGAAAGAGCTCTAGCTGCTaGAGCCTCCTCCCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RMCYEVANSWTVRLLFPRKSSSC*SLLPRA Trigger: GGCCCTGGGGAGGAGGCTGCAGCAGCTAGAGCTCTT...TCTGGGAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR GCA 90 bp | CTGCCATGTAACTGGAGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCAGGCAGAATGGCTCTTCCTaGACTCCCAGGAAGCGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LPCNWRMCYEVANSWTVRQNGSS*TPRKRS Trigger: CGACCGCTTCCTGGGAGTGCAGGAAGAGCCATTCTG...CCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGTTACATGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR GCA 90 bp | ACTGGAGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCAGCGGAAGTAGCGTATaGGGTGCTGCGGCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TGGCAMRLQTAGLSGCFFSGSSV*GAAALP Trigger: TGGCAGTGCCGCAGCACCGCATACGCTACTTCCGCT...GAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | ACTGGAGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCGGGTGCCTGAAGCCCTaGTTTCAAGATGGCTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: TGGCAMRLQTAGLSGCFFGCLKP*FQDGSP Trigger: CGGAGAGCCATCTTGAAACCAGGGCTTCAGGCACCC...GAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCATGTAACTGGAGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCCAGGTGTCTCCAGGCTaGAATCAAGCCCAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPCNWRMCYEVANSWTVQVSPG*NQAQFW Trigger: CCAGAACTGGGCTTGATTCCAGCCTGGAGACACCTG...GACAGTCCAGCTGTTTGCAACCTCATAGCACATCCTCCAGTTACATGGCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | AGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCCAGAGACCTGGGTTCCATGTaGTACCTTAGCCAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RMCYEVANSWTVRLLFPRDLGSM*YLSQGE Trigger: CTCACCCTGGCTAAGGTACCACATGGAACCCAGGTC...TCTGGGAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | AAATTAAAGAGAGAGAGCGAGAACCTGTTTCTGCTTGGCCTGTTTTATCCGAAAGCAGAGCCGGCTTCTTaGACCCAGCCTCCGGTTGCG | + |
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Preference number: 4 (lower is better) Translates to: KLKRESENLFLLGLFYPKAEPAS*TQPPVA Trigger: CGCAACCGGAGGCTGGGTCCAAGAAGCCGGCTCTGC...TTTCGGATAAAACAGGCCAAGCAGAAACAGGTTCTCGCTCTCTCTCTTTAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | AGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCCAGAGTCAGGCCAAACACCTaGATCCCACACATTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RMCYEVANSWTVRLLFPRVRPNT*IPHISH Trigger: ATGGGAAATGTGTGGGATCCAGGTGTTTGGCCTGAC...TCTGGGAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTCCTTCATTCTCCTTGAGCATTGAGTACAGTACATTTTGGAAGCTTGAACTGCGCCTGCCACTGTaGAAGCAATGTAGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLPSFSLSIEYSTFWKLELRLPL*KQCSSG Trigger: CCCAGAGCTACATTGCTTCCACAGTGGCAGGCGCAG...TTCAAGCTTCCAAAATGTACTGTACTCAATGCTCAAGGAGAATGAAGGAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CCA 90 bp | AAATTAAAGAGAGAGAGCGAGAACCTGTTTCTGCTTGGCCTGTTTTATCCGAAAGTGCAGGGCCTGTGCTaGTACCAGGAACTCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: KLKRESENLFLLGLFYPKVQGLC*YQELST Trigger: TGTGCTGAGTTCCTGGTACCAGCACAGGCCCTGCAC...TTTCGGATAAAACAGGCCAAGCAGAAACAGGTTCTCGCTCTCTCTCTTTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR TCA 90 bp | GAAACCAAAATTAAAGAGAGAGAGCGAGAACCTGTTTCTGCTTGGCCTGTTTTAGTGGCACAGAGCACATaGTGGCCCAGAAGAACCAAG | + |
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Preference number: 4 (lower is better) Translates to: ETKIKEREREPVSAWPVLVAQST*WPRRTK Trigger: CTTGGTTCTTCTGGGCCATCATGTGCTCTGTGCCAC...TAAAACAGGCCAAGCAGAAACAGGTTCTCGCTCTCTCTCTTTAATTTTGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR GCA 90 bp | TCATTCTCCTTGAGCATTGAGTACAGTACATTTTGGAAGCTTGAAACCAAAATTCCGAAGAGCTCTAGCTaGTGCAGCCTCCTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SFSLSIEYSTFWKLETKIPKSSS*CSLLPR Trigger: CCTGGGGAGGAGGCTGCAGCAGCTAGAGCTCTTCGG...AATTTTGGTTTCAAGCTTCCAAAATGTACTGTACTCAATGCTCAAGGAGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR TCA 90 bp | TCATTCTCCTTGAGCATTGAGTACAGTACATTTTGGAAGCTTGAAACCAAAATTGAAGAACCAAGTCCCTaGACTGTAGCTGGGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SFSLSIEYSTFWKLETKIEEPSP*TVAGRV Trigger: CACCCTCCCAGCTACAGTTCAGGGACTTGGTTCTTC...AATTTTGGTTTCAAGCTTCCAAAATGTACTGTACTCAATGCTCAAGGAGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR GCA 90 bp | TCATTCTCCTTGAGCATTGAGTACAGTACATTTTGGAAGCTTGAAACCAAAATTCTCTGTCACCATCAGTaGCACAAAATGTGTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SFSLSIEYSTFWKLETKILCHHQ*HKMCGP Trigger: CGGCCCACACATTTTGTGGCACTGATGGTGACAGAG...AATTTTGGTTTCAAGCTTCCAAAATGTACTGTACTCAATGCTCAAGGAGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR GCA 90 bp | TCATTCTCCTTGAGCATTGAGTACAGTACATTTTGGAAGCTTGAAACCAAAATTCTCCTGAGAAGTTCATaGTTGGGTCTGGCATTTCTA | + |
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Preference number: 4 (lower is better) Translates to: SFSLSIEYSTFWKLETKILLRSS*LGLAFL Trigger: TAGAAATGCCAGACCCAAGCATGAACTTCTCAGGAG...AATTTTGGTTTCAAGCTTCCAAAATGTACTGTACTCAATGCTCAAGGAGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 90 bp | AGGTCCGAGCGCTGCCAGCGGCTCGTCCCAGCAGAAGGCGCAGAATaGCTCTTCCTGCACTCCCAGGAAGCGGTCGGTGTAGCCCACCGA | + |
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Preference number: 5 (lower is better) Translates to: RSERCQRLVPAEGAE*LFLHSQEAVGVAHR Trigger: TCGGTGGGCTACACCGACCGCTTCCTGGGAGTGCAGGAAGAGCCATTCTGCGCCTTCTGCTGGGACGAGCCGCTGGCAGCGCTCGGACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS TCA 90 bp | AAAAGTCAGCAGGGTCCAGGCGCGGGTCCCAGCGGATGCGTCGGATaGCGTCAGCAGCAGTACGCAGAGCCGGCTTCTTGGACCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: KSQQGPGAGPSGCVG*RQQQYAEPASWTQP Trigger: AGGCTGGGTCCAAGAAGCCGGCTCTGCGTACTGCTGCTGACGTCATCCGACGCATCCGCTGGGACCCGCGCCTGGACCCTGCTGACTTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CAA 90 bp | CAGGCTGCTTTTTCCCAGATGCCTCCCTGCCTCCCTCCCTCCCTCTCCCCTCCCCCAGTTCTGGTCTCTTaGATTGCCCCACCCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: QAAFSQMPPCLPPSLSPPPVLVS*IAPPSS Trigger: CGAAGAGGGTGGGGCAATCAAAGAGACCAGAACTGG...GGGAGGGGAGAGGGAGGGAGGGAGGCAGGGAGGCATCTGGGAAAAAGCAGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 90 bp | GGGCCGGGGCTGGCGAGGGGCCCTTCTGTCGTCAGGCCAAACACCTaGATCCCACACATTTCCCATCTCTTCAGCAGAAAGCCCTTTCGT | + |
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Preference number: 5 (lower is better) Translates to: GPGLARGPSVVRPNT*IPHISHLFSRKPFR Trigger: ACGAAAGGGCTTTCTGCTGAAGAGATGGGAAATGTGTGGGATCCAGGTGTTTGGCCTGACGACAGAAGGGCCCCTCGCCAGCCCCGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS TCA 90 bp | TGGCCCAGAAGAACCAAGTCCCTGAACTGTAGCTGGGAGGGTGCCTaGAGCCCTGGTTTCAAGATGGCTCTCCGAAGAGCTCTAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: WPRRTKSLNCSWEGA*SPGFKMALRRALAA Trigger: AGCAGCTAGAGCTCTTCGGAGAGCCATCTTGAAACCAGGGCTTCAGGCACCCTCCCAGCTACAGTTCAGGGACTTGGTTCTTCTGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 90 bp | GGTCTGGCATTTCTAACTCAGTGGTCCCATTCAGCCCGGTCTCTTTaGTTGGCCCATCCACTTCAGGTGTCTCCAGGCTGGAATCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: GLAFLTQWSHSARSL*LAHPLQVSPGWNQA Trigger: GGCTTGATTCCAGCCTGGAGACACCTGAAGTGGATGGGCCAACCAAAGAGACCGGGCTGAATGGGACCACTGAGTTAGAAATGCCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CAA 90 bp | AGGATGTGCTATGAGGTTGCAAACAGCTGGACTGTCAGGCTGCTTTTTCCCAGAGCCCGGTCTCTTTGGTaGGCCCATCCACTTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: RMCYEVANSWTVRLLFPRARSLW*AHPLQV Trigger: CACCTGAAGTGGATGGGCCAACCAAAGAGACCGGGC...TCTGGGAAAAAGCAGCCTGACAGTCCAGCTGTTTGCAACCTCATAGCACATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 90 bp | TCACTCCTGAGAAGTTCATGCTTGGGTCTGGCATTTCTAACTCAGTaGTCCCATTCAGCCCGGTCTCTTTGGTTGGCCCATCCACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: SLLRSSCLGLAFLTQ*SHSARSLWLAHPLQ Trigger: CTGAAGTGGATGGGCCAACCAAAGAGACCGGGCTGAATGGGACCACTGAGTTAGAAATGCCAGACCCAAGCATGAACTTCTCAGGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS-3UTR CAA 90 bp | AAAATTAAAGAGAGAGAGCGAGAACCTGTTTCTGCTTGGCCTGTTTTATCCGAACTGAGAAGTTCATGCTaGGGTCTGGCATTTCTAACT | + |
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Preference number: 5 (lower is better) Translates to: KIKEREREPVSAWPVLSELRSSC*GLAFLT Trigger: AGTTAGAAATGCCAGACCCAAGCATGAACTTCTCAG...TTCGGATAAAACAGGCCAAGCAGAAACAGGTTCTCGCTCTCTCTCTTTAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS GCA 72 bp | GTGCTGCGGCACTGCCAACACGCCAGGTCCGAGCGCTaGCAGCGGCTCGTCCCAGCAGAAGGCGCAGAATGG | + |
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Preference number: 6 (lower is better) Translates to: VLRHCQHARSER*QRLVPAEGAEW Trigger: CCATTCTGCGCCTTCTGCTGGGACGAGCCGCTGGCAGCGCTCGGACCTGGCGTGTTGGCAGTGCCGCAGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS TCA 72 bp | CAGGGTCCAGGCGCGGGTCCCAGCGGATGCGTCGGATaGCGTCAGCAGCAGTACGCAGAGCCGGCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QGPGAGPSGCVG*RQQQYAEPASW Trigger: CCAAGAAGCCGGCTCTGCGTACTGCTGCTGACGTCATCCGACGCATCCGCTGGGACCCGCGCCTGGACCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 72 bp | CGCTGCCAGCGGCTCGTCCCAGCAGAAGGCGCAGAATaGCTCTTCCTGCACTCCCAGGAAGCGGTCGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: RCQRLVPAEGAE*LFLHSQEAVGV Trigger: TACACCGACCGCTTCCTGGGAGTGCAGGAAGAGCCATTCTGCGCCTTCTGCTGGGACGAGCCGCTGGCAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS TCA 72 bp | CCTGTCAGTGTGGGGGAGGGTGTGGCACAGAGCACATaGTGGCCCAGAAGAACCAAGTCCCTGAACTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PVSVGEGVAQST*WPRRTKSLNCS Trigger: GCTACAGTTCAGGGACTTGGTTCTTCTGGGCCATCATGTGCTCTGTGCCACACCCTCCCCCACACTGACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS GCA 72 bp | CCAGGGCCTGTCAGCCTTAGCAAGACCACTGTCAAGTaGAGGGCCTGTGCTGGTACCAGGAACTCAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: PGPVSLSKTTVK*RACAGTRNSAQ Trigger: TTGTGCTGAGTTCCTGGTACCAGCACAGGCCCTGCACTTGACAGTGGTCTTGCTAAGGCTGACAGGCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 72 bp | TCAGCACAAGAAGGGGCAATCCGGACCAGATGCTCTTaGGCCTTGACCACCTCAGCCCTAAGCCCAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: SAQEGAIRTRCS*ALTTSALSPDS Trigger: AGAGTCTGGGCTTAGGGCTGAGGTGGTCAAGGCCCAAGAGCATCTGGTCCGGATTGCCCCTTCTTGTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CAA 72 bp | GTCTCCAGGCTGGAATCAAGCCCAGTTCTGGTCTCTTaGATTGCCCCACCCTCTTCGTGTGTCTCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VSRLESSPVLVS*IAPPSSCVSRP Trigger: GGGCCTGGAGACACACGAAGAGGGTGGGGCAATCAAAGAGACCAGAACTGGGCTTGATTCCAGCCTGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS GCA 72 bp | CAGGCTGGAATCAAGCCCAGTTCTGGTCTCTTTGATTaGCCCACCCTCTTCGTGTGTCTCCAGGCCCGAATC | + |
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Preference number: 6 (lower is better) Translates to: QAGIKPSSGLFD*PTLFVCLQARI Trigger: GATTCGGGCCTGGAGACACACGAAGAGGGTGGGGCAATCAAAGAGACCAGAACTGGGCTTGATTCCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS GCA 72 bp | ACCTGGGTTCCATGTGGTACCTTAGCCAGGGTGAGGTaGGGTTGTAGTTCTGGCAGCAGCACCACTCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: TWVPCGTLARVR*GCSSGSSTTLS Trigger: GCTTAGAGTGGTGCTGCTGCCAGAACTACAACCGCACCTCACCCTGGCTAAGGTACCACATGGAACCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 72 bp | CTGGCGAGGGGCCCTTCTGTCGTCAGGCCAAACACCTaGATCCCACACATTTCCCATCTCTTCAGCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LARGPSVVRPNT*IPHISHLFSRK Trigger: CTTTCTGCTGAAGAGATGGGAAATGTGTGGGATCCAGGTGTTTGGCCTGACGACAGAAGGGCCCCTCGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 72 bp | GTGTTTGGGCCATACCTGTCAGTGTGGGGGAGGGTGTaGCACAGAGCACATGATGGCCCAGAAGAACCAAGT | + |
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Preference number: 6 (lower is better) Translates to: VFGPYLSVWGRV*HRAHDGPEEPS Trigger: ACTTGGTTCTTCTGGGCCATCATGTGCTCTGTGCCACACCCTCCCCCACACTGACAGGTATGGCCCAAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CAA 90 bp | CTGGCATTTCTAACTCAGTGGTCCCATTCAGCCCGGTCTCTTTGGTaGGCCCATCCACTTCAGGTGTCTCCAGGCTGGAATCAAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LAFLTQWSHSARSLW*AHPLQVSPGWNQAQ Trigger: CTGGGCTTGATTCCAGCCTGGAGACACCTGAAGTGGATGGGCCAACCAAAGAGACCGGGCTGAATGGGACCACTGAGTTAGAAATGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CCA 72 bp | TTTCTAACTCAGTGGTCCCATTCAGCCCGGTCTCTTTaGTTGGCCCATCCACTTCAGGTGTCTCCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FLTQWSHSARSL*LAHPLQVSPGW Trigger: CCAGCCTGGAGACACCTGAAGTGGATGGGCCAACCAAAGAGACCGGGCTGAATGGGACCACTGAGTTAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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| CDS CAA 72 bp | ATTTCTAACTCAGTGGTCCCATTCAGCCCGGTCTCTTaGGTTGGCCCATCCACTTCAGGTGTCTCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ISNSVVPFSPVS*VGPSTSGVSRL Trigger: CAGCCTGGAGACACCTGAAGTGGATGGGCCAACCAAAGAGACCGGGCTGAATGGGACCACTGAGTTAGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058358.8 |
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