Pregenerated sensors for LENG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078813Ensembl transcript IDs: ENSMUST00000019878.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATCTGCCTGGCCCAGATCTCAGTCTCCCTCTTCATCCACTCACTaGCCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACT | + |
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Preference number: 1 (lower is better) Translates to: PSAWPRSQSPSSSTH*PPSSPARAPTSTLT Trigger: AGTCAAAGTAGATGTAGGTGCCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGATGAAGAGGGAGACTGAGATCTGGGCCAGGCAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR CCA 90 bp | GCCTTACGTTTGTACCTGCAGCCCATGTGGGGCAAAGGCCAGGCTTaGCCCCCTTCTTCACTCTTAAGATCACCAAGGGAAGGGTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: ALRLYLQPMWGKGQA*PPSSLLRSPREGWS Trigger: ACTCCACCCTTCCCTTGGTGATCTTAAGAGTGAAGAAGGGGGCCAAGCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAACGTAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR GCA 90 bp | TTGGCTTGGTACTTCCATGCCCCTGACAACTACCTCTTGTCCATCTaGCTGGCCCAGATCTCAGTCTCCCTCTTCATCCACTCACTGACC | + |
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Preference number: 1 (lower is better) Translates to: LAWYFHAPDNYLLSI*LAQISVSLFIHSLT Trigger: GGTCAGTGAGTGGATGAAGAGGGAGACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAAGTACCAAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR GCA 90 bp | TACTCCTCAGTGTCACTTAATAACCTTAGGCCTTACGTTTGTACCTaGAGCCCATGTGGGGCAAAGGCCAGGCTTGGCCCCCTTCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: YSSVSLNNLRPYVCT*SPCGAKARLGPLLH Trigger: GTGAAGAAGGGGGCCAAGCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAACGTAAGGCCTAAGGTTATTAAGTGACACTGAGGAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR TCA 90 bp | ACAGTGCAAGCTTGTAGGACAATTGGCTTGGTACTTCCATGCCCCTaGCAACTACCTCTTGTCCATCTGCCTGGCCCAGATCTCAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: TVQACRTIGLVLPCP*QLPLVHLPGPDLSL Trigger: GAGACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAAGTACCAAGCCAATTGTCCTACAAGCTTGCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR CCA 90 bp | CAGGCTTGGCCCCCTTCTTCACTCTTAAGATCACCAAGGGAAGGGTaGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTACTT | + |
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Preference number: 1 (lower is better) Translates to: QAWPPSSLLRSPREG*SLTVQACRTIGLVL Trigger: AAGTACCAAGCCAATTGTCCTACAAGCTTGCACTGTCAGACTCCACCCTTCCCTTGGTGATCTTAAGAGTGAAGAAGGGGGCCAAGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCCTCTCTGCCCTACCCTaGGGGCCTGGGGGCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SLFIHSLTTFFPGQGTYILSALP*GPGGKG Trigger: GCCCTTGCCCCCAGGCCCCCAGGGTAGGGCAGAGAG...GATGTAGGTGCCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGATGAAGAGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR CAA 90 bp | GGCCTTACGTTTGTACCTGCAGCCCATGTGGGGCAAAGGCCAGGCTaGGCCCCCTTCTTCACTCTTAAGATCACCAAGGGAAGGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GLTFVPAAHVGQRPG*APFFTLKITKGRVE Trigger: CTCCACCCTTCCCTTGGTGATCTTAAGAGTGAAGAAGGGGGCCAAGCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAACGTAAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGTTTTCTCTTCCTCTCTaGCCTACCCTGGGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PPSSPARAPTSTLTTRSGFSLPL*PTLGAW Trigger: CCAGGCCCCCAGGGTAGGGCAGAGAGGAAGAGAAAA...CCCACTTCTCGTAGTCAAAGTAGATGTAGGTGCCCTGGCCGGGGAAGAAGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAGGTACCAAGCTGGGCCTCATCAATCCCCATTCTCACAGAAATCTGTTCGTGAGGGCCCTGCCCTaGAAGACTGGGGGAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FPGTKLGLINPHSHRNLFVRALP*KTGGGP Trigger: TGGGCCTCCCCCAGTCTTCCAGGGCAGGGCCCTCAC...GAACAGATTTCTGTGAGAATGGGGATTGATGAGGCCCAGCTTGGTACCTGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAGGTACCAAGCTGGGCCTCATCAATCCCCATTCTCACAGAAATCTGTTCCCTGCCCTGGAAGACTaGGGGAGGCCCAAGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: FPGTKLGLINPHSHRNLFPALED*GRPKAM Trigger: CATGGCCTTGGGCCTCCCCCAGTCTTCCAGGGCAGG...GAACAGATTTCTGTGAGAATGGGGATTGATGAGGCCCAGCTTGGTACCTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR TCA 90 bp | GTACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTATGACGGCTGGCAGCTaGGGCCTCTCCTATCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VHMLHCRPPVGPYSSVSLMTAGS*GLSYPH Trigger: GTGGGGATAGGAGAGGCCTCAGCTGCCAGCCGTCAT...AAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGAAGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTAGGAAGGCTTCACCTTTaGGTACCGCTACCTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PREGWSLTVQACRTIGLVGRLHL*VPLPGG Trigger: TCCTCCAGGTAGCGGTACTCAAAGGTGAAGCCTTCC...TACCAAGCCAATTGTCCTACAAGCTTGCACTGTCAGACTCCACCCTTCCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | GTACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTTTGAGTACCGCTACCTaGAGGACCGGGACCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VHMLHCRPPVGPYSSVSLLSTAT*RTGTSS Trigger: ACTGGAGGTCCCGGTCCTCCAGGTAGCGGTACTCAA...AAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTTACCTGCAGCCCATGTaGGGCAAAGGCCAGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: VPQNLSYSEVCISRVLDGYLQPM*GKGQAW Trigger: CCAAGCCTGGCCTTTGCCCCACATGGGCTGCAGGTA...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGGAAGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTAGTTTTATATGACGGCTaGCAGCTGAGGCCTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: PREGWSLTVQACRTIGLVVLYDG*QLRPLL Trigger: TAGGAGAGGCCTCAGCTGCCAGCCGTCATATAAAAC...TACCAAGCCAATTGTCCTACAAGCTTGCACTGTCAGACTCCACCCTTCCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTATCTTGTCCATCTGCCTaGCCCAGATCTCAGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: YICCIVGHLLVPTPQCHLSCPSA*PRSQSP Trigger: GGGAGACTGAGATCTGGGCCAGGCAGATGGACAAGA...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGGTACCAAGCTGGGCCTCATCAATCCCCATTCTCACAGAAATCTGTTCCACCTACATCTACTTTaGCTACGAGAAGTGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: FPGTKLGLINPHSHRNLFHLHLL*LREVGP Trigger: TGGCCCCACTTCTCGTAGTCAAAGTAGATGTAGGTG...GAACAGATTTCTGTGAGAATGGGGATTGATGAGGCCCAGCTTGGTACCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTTCACCAAGGGAAGGGTaGAGTCTGACAGTGCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: VPQNLSYSEVCISRVLDGSPREG*SLTVQA Trigger: AGCTTGCACTGTCAGACTCCACCCTTCCCTTGGTGA...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTGTACTTCCATGCCCCTaGCAACTACCTCTTGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: VPQNLSYSEVCISRVLDGVLPCP*QLPLVH Trigger: ATGGACAAGAGGTAGTTGTCAGGGGCATGGAAGTAC...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTATTTGACTACGAGAAGTaGGGCCAGCGGAAGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: YICCIVGHLLVPTPQCHLFDYEK*GQRKKE Trigger: TTCCTTCTTCCGCTGGCCCCACTTCTCGTAGTCAAA...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAGGTACCAAGCTGGGCCTCATCAATCCCCATTCTCACAGAAATCTGTTCTATCCTGCCCTGCTTTaGTCCTTGACACGAATATCT | + |
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Preference number: 2 (lower is better) Translates to: FPGTKLGLINPHSHRNLFYPALL*SLTRIS Trigger: AGATATTCGTGTCAAGGACCAAAGCAGGGCAGGATA...GAACAGATTTCTGTGAGAATGGGGATTGATGAGGCCCAGCTTGGTACCTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR TCA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTAATAAATAGTTTTATATaGCGGCTGGCAGCTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: YICCIVGHLLVPTPQCHLINSFI*RLAAEA Trigger: GGCCTCAGCTGCCAGCCGTCATATAAAACTATTTAT...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR TCA 72 bp | GAAGTGGGGCCAGCGGAAGAAGGAAGGCTTCACCTTTaGGTACCGCTACCTGGAGGACCGGGACCTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: EVGPAEEGRLHL*VPLPGGPGPPV Trigger: CACTGGAGGTCCCGGTCCTCCAGGTAGCGGTACTCAAAGGTGAAGCCTTCCTTCTTCCGCTGGCCCCACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR TCA 72 bp | TGGCCCAGATCTCAGTCTCCCTCTTCATCCACTCACTaGCCACCTTCTTCCCCGGCCAGGGCACCTACATCT | + |
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Preference number: 3 (lower is better) Translates to: WPRSQSPSSSTH*PPSSPARAPTS Trigger: AGATGTAGGTGCCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGATGAAGAGGGAGACTGAGATCTGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR GCA 72 bp | GTGTCACTTAATAACCTTAGGCCTTACGTTTGTACCTaGAGCCCATGTGGGGCAAAGGCCAGGCTTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: VSLNNLRPYVCT*SPCGAKARLGP Trigger: GGGGCCAAGCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAACGTAAGGCCTAAGGTTATTAAGTGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR CCA 72 bp | TCCATGCCCCTGACAACTACCTCTTGTCCATCTGCCTaGCCCAGATCTCAGTCTCCCTCTTCATCCACTCAC | + |
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Preference number: 3 (lower is better) Translates to: SMPLTTTSCPSA*PRSQSPSSSTH Trigger: GTGAGTGGATGAAGAGGGAGACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR GCA 72 bp | TACTTCCATGCCCCTGACAACTACCTCTTGTCCATCTaGCTGGCCCAGATCTCAGTCTCCCTCTTCATCCAC | + |
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Preference number: 3 (lower is better) Translates to: YFHAPDNYLLSI*LAQISVSLFIH Trigger: GTGGATGAAGAGGGAGACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR TCA 72 bp | GCTTGTAGGACAATTGGCTTGGTACTTCCATGCCCCTaGCAACTACCTCTTGTCCATCTGCCTGGCCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: ACRTIGLVLPCP*QLPLVHLPGPD Trigger: ATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAAGTACCAAGCCAATTGTCCTACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CAA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTACCTGACAACTACCTCTaGTCCATCTGCCTGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: YICCIVGHLLVPTPQCHLPDNYL*SICLAQ Trigger: CTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGG...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR CCA 72 bp | CCCCCTTCTTCACTCTTAAGATCACCAAGGGAAGGGTaGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGC | + |
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Preference number: 3 (lower is better) Translates to: PPSSLLRSPREG*SLTVQACRTIG Trigger: GCCAATTGTCCTACAAGCTTGCACTGTCAGACTCCACCCTTCCCTTGGTGATCTTAAGAGTGAAGAAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTAGGAAGGCTTCACCTTaGAGTACCGCTACCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: VPQNLSYSEVCISRVLDGRKASP*STATWR Trigger: CCTCCAGGTAGCGGTACTCAAAGGTGAAGCCTTCCT...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCCAGGTACCAAGCTGGGCCTCATCAATCCCCATTCTCACAGAAATCTGTTCGCACCTACATCTACTTaGACTACGAGAAGTGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: FPGTKLGLINPHSHRNLFAPTST*TTRSGA Trigger: GGCCCCACTTCTCGTAGTCAAAGTAGATGTAGGTGC...GAACAGATTTCTGTGAGAATGGGGATTGATGAGGCCCAGCTTGGTACCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR-3UTR CAA 90 bp | GTACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTAAGCTTGTAGGACAATaGGCTTGGTACTTCCATGCC | + |
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Preference number: 3 (lower is better) Translates to: VHMLHCRPPVGPYSSVSLKLVGQ*AWYFHA Trigger: GGCATGGAAGTACCAAGCCAATTGTCCTACAAGCTT...AAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR TCA 72 bp | CTTAAGGCATTGAGTCCCTCAGAATCTCAGTTACAGTaGAGTGTGTATCTCCAGAGTGCTAGATGGTACATA | + |
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Preference number: 3 (lower is better) Translates to: LKALSPSESQLQ*SVYLQSARWYI Trigger: TATGTACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGACTCAATGCCTTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR CCA 90 bp | ATAACCTTAGGCCTTACGTTTGTACCTGCAGCCCATGTGGGGCAAAGGCCAGGCGGAGTTGGGTTCTGCTaGCGGGGTCGCCGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ITLGLTFVPAAHVGQRPGGVGFC*RGRRAS Trigger: GCTGGCCCGGCGACCCCGCCAGCAGAACCCAACTCC...GCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAACGTAAGGCCTAAGGTTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR CCA 90 bp | TCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCTCAGTGGGCAGGAGTTaGGTTCTGCTGGCGGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: SLFIHSLTTFFPGQGTYISVGRS*VLLAGS Trigger: CGACCCCGCCAGCAGAACCCAACTCCTGCCCACTGA...GATGTAGGTGCCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGATGAAGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR GCA 90 bp | TCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCCTGAGTTTGGGCCTCTaGTGCACTCTGGCCCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: SLFIHSLTTFFPGQGTYILSLGL*CTLAQV Trigger: TACTTGGGCCAGAGTGCAGCAGAGGCCCAAACTCAG...GATGTAGGTGCCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGATGAAGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR CCA 90 bp | ATAACCTTAGGCCTTACGTTTGTACCTGCAGCCCATGTGGGGCAAAGGCCAGGCCACAGGGCCAGAACTTaGAGCTCCTGGGTCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ITLGLTFVPAAHVGQRPGHRART*SSWVCC Trigger: GCAGCAGACCCAGGAGCTCCAAGTTCTGGCCCTGTG...GCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAACGTAAGGCCTAAGGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR GCA 90 bp | CCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGTCCTTGTTCCGGACGTaGCAGCTCTTCTTCGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PPSSPARAPTSTLTTRSGSLFRT*QLFFGK Trigger: CTTGCCGAAGAAGAGCTGGCACGTCCGGAACAAGGA...CCCACTTCTCGTAGTCAAAGTAGATGTAGGTGCCCTGGCCGGGGAAGAAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR GCA 90 bp | GTACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTGGCCAGCAGGGCCTCTaGTCGAGCTCTCTCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VHMLHCRPPVGPYSSVSLGQQGL*SSSLGC Trigger: GCAGCCGAGAGAGCTCGAGCAGAGGCCCTGCTGGCC...AAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR CCA 90 bp | TGGCTTGGTACTTCCATGCCCCTGACAACTACCTCTTGTCCATCTGCCTGGCCCTCTTCTGCTTCCACCTaGCCTTGCTGGGATACCTGG | + |
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Preference number: 4 (lower is better) Translates to: WLGTSMPLTTTSCPSAWPSSAST*PCWDTW Trigger: CCAGGTATCCCAGCAAGGCCAGGTGGAAGCAGAAGA...GGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAAGTACCAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR GCA 90 bp | CCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGGGCACTGAGTTTCGTTaGCTGGCTTTCTTCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PPSSPARAPTSTLTTRSGGTEFR*LAFFRR Trigger: CCTACGGAAGAAAGCCAGGCAACGAAACTCAGTGCC...CCCACTTCTCGTAGTCAAAGTAGATGTAGGTGCCCTGGCCGGGGAAGAAGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR GCA 90 bp | CCACCTTCTTCCCCGGCCAGGGCACCTACATCTACTTTGACTACGAGAAGTGGGAGTTTGGGCCTCTGCTaGACTCTGGCCCAAGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: PPSSPARAPTSTLTTRSGSLGLC*TLAQVS Trigger: ACTTACTTGGGCCAGAGTGCAGCAGAGGCCCAAACT...CCCACTTCTCGTAGTCAAAGTAGATGTAGGTGCCCTGGCCGGGGAAGAAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR CCA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTAGTACGGGCCTCTTGCTaGGCGAGCAGCACCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: YICCIVGHLLVPTPQCHLVRASC*ASSTLR Trigger: GCGGAGGGTGCTGCTCGCCCAGCAAGAGGCCCGTAC...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR CCA 90 bp | ATAACCTTAGGCCTTACGTTTGTACCTGCAGCCCATGTGGGGCAAAGGCCAGGCAGAACTTGGAGCTCCTaGGTCTGCTGCTTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ITLGLTFVPAAHVGQRPGRTWSS*VCCFQL Trigger: GAGCTGGAAGCAGCAGACCCAGGAGCTCCAAGTTCT...GCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAACGTAAGGCCTAAGGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS-3UTR CCA 90 bp | CCAAGGGAAGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTACTTCTCATCTGGGCTTaGGCCTGGAGGGCAGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PREGWSLTVQACRTIGLVLLIWA*AWRAAV Trigger: GACTGCTGCCCTCCAGGCCCAAGCCCAGATGAGAAG...TACCAAGCCAATTGTCCTACAAGCTTGCACTGTCAGACTCCACCCTTCCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| 3UTR CAA 72 bp | TTGGCTTGGTACTTCCATGCCCCTGACAACTACCTCTaGTCCATCTGCCTGGCCCAGATCTCAGTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAWYFHAPDNYL*SICLAQISVSL Trigger: GAGGGAGACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAAGTACCAAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| 3UTR CAA 72 bp | TTTGTACCTGCAGCCCATGTGGGGCAAAGGCCAGGCTaGGCCCCCTTCTTCACTCTTAAGATCACCAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVPAAHVGQRPG*APFFTLKITKG Trigger: TCCCTTGGTGATCTTAAGAGTGAAGAAGGGGGCCAAGCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGGGAAGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTATGGTACCAAGGAGGCTaGGTTTGGGCCTCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PREGWSLTVQACRTIGLVWYQGG*VWASAA Trigger: TGCAGCAGAGGCCCAAACTCAGCCTCCTTGGTACCA...TACCAAGCCAATTGTCCTACAAGCTTGCACTGTCAGACTCCACCCTTCCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR TCA 90 bp | ATAACCTTAGGCCTTACGTTTGTACCTGCAGCCCATGTGGGGCAAAGGCCAGGCGATCCAGTCGGTTCTTaGTCTTCTCATCTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITLGLTFVPAAHVGQRPGDPVGS*SSHLGL Trigger: CAAGCCCAGATGAGAAGATCAAGAACCGACTGGATC...GCCTGGCCTTTGCCCCACATGGGCTGCAGGTACAAACGTAAGGCCTAAGGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGGTACTTCCATGCCCCTGACAACTACCTCTTGTCCATCTGCCTGGCCCAAGGACGGCTTTCACTaGTGTGCCTTTTCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLGTSMPLTTTSCPSAWPKDGFH*CAFSLP Trigger: TGGCAAAGAAAAGGCACAGCAGTGAAAGCCGTCCTT...GGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAAGTACCAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTGGTCGCCGGGCCAGCTaGGGATTGAACTGGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPQNLSYSEVCISRVLDGGRRAS*GLNWEL Trigger: CAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACC...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTTGGAGCTCCTGGGTCTaGTGCTTCCAGCTCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPQNLSYSEVCISRVLDGWSSWV*CFQLRH Trigger: GTGCCTGAGCTGGAAGCAGCAGACCCAGGAGCTCCA...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCCTTTTCTTTGCCAGGTaGTTCTGCATCTCTTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLFIHSLTTFFPGQGTYILFFAR*FCISFK Trigger: CTTGAAAGAGATGCAGAAGCACCTGGCAAAGAAAAG...GATGTAGGTGCCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGATGAAGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTGCAGTCCTTTTGCCCTaGGGGGAGCTGGTACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPQNLSYSEVCISRVLDGAVLLP*GELVPR Trigger: CCTTGGTACCAGCTCCCCCCAGGGCAAAAGGACTGC...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR TCA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTAGGGCCAGCTGGGGATTaGACTGGGAGTTGTATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YICCIVGHLLVPTPQCHLGPAGD*TGSCIV Trigger: GACGATACAACTCCCAGTTCAATCCCCAGCTGGCCC...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR GCA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTAGCTTCCACCTGGCCTTaGTGGGATACCTGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YICCIVGHLLVPTPQCHLASTWP*WDTWPC Trigger: ACAAGGCCAGGTATCCCAGCAAGGCCAGGTGGAAGC...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGGGAAGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTACCTCATGCTCTTTATTaGCTCTGGGAACTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PREGWSLTVQACRTIGLVPHALY*LWELLS Trigger: GGAAAGGAGTTCCCAGAGGCAATAAAGAGCATGAGG...TACCAAGCCAATTGTCCTACAAGCTTGCACTGTCAGACTCCACCCTTCCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGGTACCAAGCTGGGCCTCATCAATCCCCATTCTCACAGAAATCTGTTCCGGCTTTCACTGCTGTaGCTTTTCTTTGCCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPGTKLGLINPHSHRNLFRLSLL*LFFARC Trigger: GCACCTGGCAAAGAAAAGGCACAGCAGTGAAAGCCG...GAACAGATTTCTGTGAGAATGGGGATTGATGAGGCCCAGCTTGGTACCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTCTTGATCTTCTCATCTaGGCTTGGGCCTGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPQNLSYSEVCISRVLDGLDLLI*AWAWRA Trigger: TGCCCTCCAGGCCCAAGCCCAGATGAGAAGATCAAG...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR GCA 90 bp | GTACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTTTCATCTGTCTCTTCTaGTTCCACCTGGCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHMLHCRPPVGPYSSVSLFICLF*FHLALL Trigger: CAGCAAGGCCAGGTGGAAGCAGAAGAGACAGATGAA...AAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGGGAAGGGTGGAGTCTGACAGTGCAAGCTTGTAGGACAATTGGCTTGGTACTGAGTTTCGTTGCCTaGCTTTCTTCCGTAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PREGWSLTVQACRTIGLVLSFVA*LSSVGI Trigger: AATTCCTACGGAAGAAAGCCAGGCAACGAAACTCAG...TACCAAGCCAATTGTCCTACAAGCTTGCACTGTCAGACTCCACCCTTCCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR GCA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTATTTGCCAGGTGCTTCTaGATCTCTTTCAAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: YICCIVGHLLVPTPQCHLFARCF*ISFKGS Trigger: GGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAAA...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| 3UTR CAA 72 bp | GCTAGATGGTACATATGTTGCATTGTAGGCCACCTGTaGGTCCCTACTCCTCAGTGTCACTTAATAACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ARWYICCIVGHL*VPTPQCHLITL Trigger: TAAGGTTATTAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTACCATCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS GCA 90 bp | GCCTTGCTGGGATACCTGGCCTTGTACCCGGGCCAGCAGGGCCTCTaGTCGAGCTCTCTCGGCTGCTTCCCGCTGAAGACGCTCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: ALLGYLALYPGQQGL*SSSLGCFPLKTLST Trigger: CGTGCTGAGCGTCTTCAGCGGGAAGCAGCCGAGAGAGCTCGAGCAGAGGCCCTGCTGGCCCGGGTACAAGGCCAGGTATCCCAGCAAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS TCA 90 bp | CGGGCCAGCAGGGCCTCTGCTCGAGCTCTCTCGGCTGCTTCCCGCTaGAGACGCTCAGCACGGAGCTTTTCTAGGGAAGGTGGCTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RASRASARALSAASR*RRSARSFSREGGSR Trigger: CCGAGAGCCACCTTCCCTAGAAAAGCTCCGTGCTGAGCGTCTTCAGCGGGAAGCAGCCGAGAGAGCTCGAGCAGAGGCCCTGCTGGCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS CCA 90 bp | CAGTGGGCAGGAGTTGGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTaGGGATTGAACTGGGAGTTGTATCGTCGCCTCCGTTCATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QWAGVGFCWRGRRAS*GLNWELYRRLRSSV Trigger: GACAGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCAGAACCCAACTCCTGCCCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS TCA 90 bp | CAGGAGTTGGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATTaGACTGGGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QELGSAGGVAGPAGD*TGSCIVASVHLSLL Trigger: CAGAAGAGACAGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCAGAACCCAACTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS CCA 90 bp | GAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCTGCTTCCACCTaGCCTTGCTGGGATACCTGGCCTTGTACCCGGGCCAGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELYRRLRSSVSSAST*PCWDTWPCTRASRA Trigger: GGCCCTGCTGGCCCGGGTACAAGGCCAGGTATCCCAGCAAGGCCAGGTGGAAGCAGAAGAGACAGATGAACGGAGGCGACGATACAACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS CCA 90 bp | GTTGGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATTGAACTaGGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGFCWRGRRASWGLN*ELYRRLRSSVSSAS Trigger: GGAAGCAGAAGAGACAGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCAGAACCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | TTCCATGCCCCTGACAACTACCTCTTGTCCATCTGCCTGGCCCAGATCTCAGTCCTGGGATACCTGGCCTaGTACCCGGGCCAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FHAPDNYLLSICLAQISVLGYLA*YPGQQG Trigger: GCCCTGCTGGCCCGGGTACAAGGCCAGGTATCCCAG...GACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCTCTTCTCATCTGGGCTaGGGCCTGGAGGGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLFIHSLTTFFPGQGTYISSHLG*GLEGSS Trigger: ACTGCTGCCCTCCAGGCCCAAGCCCAGATGAGAAGA...GATGTAGGTGCCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGATGAAGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTTCATCCACTCACTGACCACCTTCTTCCCCGGCCAGGGCACCTACATCTGCTTCCACCTGGCCTaGCTGGGATACCTGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLFIHSLTTFFPGQGTYICFHLA*LGYLAL Trigger: CAAGGCCAGGTATCCCAGCAAGGCCAGGTGGAAGCA...GATGTAGGTGCCCTGGCCGGGGAAGAAGGTGGTCAGTGAGTGGATGAAGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS GCA 90 bp | GGAGCTCCTGGGTCTGCTGCTTCCAGCTCAGGCACTGAGTTTCGTTaGCTGGCTTTCTTCCGTAGGAATTCCGTACGGGCCTCTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAPGSAASSSGTEFR*LAFFRRNSVRASCW Trigger: CCAGCAAGAGGCCCGTACGGAATTCCTACGGAAGAAAGCCAGGCAACGAAACTCAGTGCCTGAGCTGGAAGCAGCAGACCCAGGAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS CCA 90 bp | CTCCTGGGTCTGCTGCTTCCAGCTCAGGCACTGAGTTTCGTTGCCTaGCTTTCTTCCGTAGGAATTCCGTACGGGCCTCTTGCTGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LLGLLLPAQALSFVA*LSSVGIPYGPLAGR Trigger: TCGCCCAGCAAGAGGCCCGTACGGAATTCCTACGGAAGAAAGCCAGGCAACGAAACTCAGTGCCTGAGCTGGAAGCAGCAGACCCAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | TTCCATGCCCCTGACAACTACCTCTTGTCCATCTGCCTGGCCCAGATCTCAGTCCGCACGCGGGCAACATaGTCCTTGTTCCGGACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FHAPDNYLLSICLAQISVRTRAT*SLFRTC Trigger: GCACGTCCGGAACAAGGACAATGTTGCCCGCGTGCG...GACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | TTCCATGCCCCTGACAACTACCTCTTGTCCATCTGCCTGGCCCAGATCTCAGTCCCAAGGAGGCTGAGTTaGGGCCTCTGCTGCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHAPDNYLLSICLAQISVPRRLS*GLCCTL Trigger: CAGAGTGCAGCAGAGGCCCAAACTCAGCCTCCTTGG...GACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS GCA 90 bp | ATTGAACTGGGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCTaGTTCCACCTGGCCTTGCTGGGATACCTGGCCTTGTACCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IELGVVSSPPFICLF*FHLALLGYLALYPG Trigger: GCCCGGGTACAAGGCCAGGTATCCCAGCAAGGCCAGGTGGAAGCAGAAGAGACAGATGAACGGAGGCGACGATACAACTCCCAGTTCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | TTCCATGCCCCTGACAACTACCTCTTGTCCATCTGCCTGGCCCAGATCTCAGTCCGGGCCAGCTGGGGATaGAACTGGGAGTTGTATCGT | + |
|
Preference number: 5 (lower is better) Translates to: FHAPDNYLLSICLAQISVRASWG*NWELYR Trigger: ACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCG...GACTGAGATCTGGGCCAGGCAGATGGACAAGAGGTAGTTGTCAGGGGCATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS TCA 90 bp | TTGCCAGGTGCTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTCTTaGTCTTCTCATCTGGGCTTGGGCCTGGAGGGCAGCAGTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPGASASLSRDPVGS*SSHLGLGLEGSSPF Trigger: AAAAGGACTGCTGCCCTCCAGGCCCAAGCCCAGATGAGAAGATCAAGAACCGACTGGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTACCACAGGGCCAGAACTaGGAGCTCCTGGGTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YICCIVGHLLVPTPQCHLPQGQN*ELLGLL Trigger: CAGCAGACCCAGGAGCTCCAAGTTCTGGCCCTGTGG...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS GCA 90 bp | CCGTTCCTCTCTGGAAGGACGGCTTTCACTGCTGTGCCTTTTCTTTaGCAGGTGCTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFLSGRTAFTAVPFL*QVLLHLFQGIQSVL Trigger: AAGAACCGACTGGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAAAGAAAAGGCACAGCAGTGAAAGCCGTCCTTCCAGAGAGGAACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCTCAGAATCTCAGTTACAGTGAAGTGTGTATCTCCAGAGTGCTAGATGGTCGGGCAACATTGTCCTaGTTCCGGACGTGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPQNLSYSEVCISRVLDGRATLS*FRTCQL Trigger: GAGCTGGCACGTCCGGAACAAGGACAATGTTGCCCG...ACCATCTAGCACTCTGGAGATACACACTTCACTGTAACTGAGATTCTGAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS GCA 90 bp | TCTCTGGAAGGACGGCTTTCACTGCTGTGCCTTTTCTTTGCCAGGTaGTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTCTTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLEGRLSLLCLFFAR*FCISFKGSSRFLIF Trigger: GAAGATCAAGAACCGACTGGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAAAGAAAAGGCACAGCAGTGAAAGCCGTCCTTCCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS GCA 90 bp | GAAGGACGGCTTTCACTGCTGTGCCTTTTCTTTGCCAGGTGCTTCTaGATCTCTTTCAAGGGATCCAGTCGGTTCTTGATCTTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: EGRLSLLCLFFARCF*ISFKGSSRFLIFSS Trigger: AGATGAGAAGATCAAGAACCGACTGGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAAAGAAAAGGCACAGCAGTGAAAGCCGTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS-3UTR CAA 90 bp | TACATATGTTGCATTGTAGGCCACCTGTTGGTCCCTACTCCTCAGTGTCACTTATCCTCATGCTCTTTATaGCCTCTGGGAACTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YICCIVGHLLVPTPQCHLSSCSL*PLGTPF Trigger: GAAAGGAGTTCCCAGAGGCAATAAAGAGCATGAGGA...TAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCTACAATGCAACATATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS CAA 72 bp | CGGGCCTGGGCCTCGTCGCGCCGCACGCGGGCAACATaGTCCTTGTTCCGGACGTGCCAGCTCTTCTTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAWASSRRTRAT*SLFRTCQLFFG Trigger: GCCGAAGAAGAGCTGGCACGTCCGGAACAAGGACAATGTTGCCCGCGTGCGGCGCGACGAGGCCCAGGCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS GCA 72 bp | CCGGGCCAGCAGGGCCTCTGCTCGAGCTCTCTCGGCTaGTTCCCGCTGAAGACGCTCAGCACGGAGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PGQQGLCSSSLG*FPLKTLSTELF Trigger: GAAAAGCTCCGTGCTGAGCGTCTTCAGCGGGAAGCAGCCGAGAGAGCTCGAGCAGAGGCCCTGCTGGCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS GCA 72 bp | GGATACCTGGCCTTGTACCCGGGCCAGCAGGGCCTCTaGTCGAGCTCTCTCGGCTGCTTCCCGCTGAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: GYLALYPGQQGL*SSSLGCFPLKT Trigger: CGTCTTCAGCGGGAAGCAGCCGAGAGAGCTCGAGCAGAGGCCCTGCTGGCCCGGGTACAAGGCCAGGTATCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS CCA 72 bp | GGAGTTGGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTaGGGATTGAACTGGGAGTTGTATCGTCGCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GVGFCWRGRRAS*GLNWELYRRLR Trigger: ACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCAGAACCCAACTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS CAA 90 bp | TCCTCCTCCCGGGCCTGGGCCTCGTCGCGCCGCACGCGGGCAACATaGTCCTTGTTCCGGACGTGCCAGCTCTTCTTCGGCAAGATATTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRAWASSRRTRAT*SLFRTCQLFFGKIF Trigger: GAATATCTTGCCGAAGAAGAGCTGGCACGTCCGGAACAAGGACAATGTTGCCCGCGTGCGGCGCGACGAGGCCCAGGCCCGGGAGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS TCA 72 bp | GGTTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATTaGACTGGGAGTTGTATCGTCGCCTCCGTTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSAGGVAGPAGD*TGSCIVASVHL Trigger: CAGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCAGAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
||
| CDS CAA 72 bp | TTCTGCTTCCACCTGGCCTTGCTGGGATACCTGGCCTaGTACCCGGGCCAGCAGGGCCTCTGCTCGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FCFHLALLGYLA*YPGQQGLCSSS Trigger: AGAGCTCGAGCAGAGGCCCTGCTGGCCCGGGTACAAGGCCAGGTATCCCAGCAAGGCCAGGTGGAAGCAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CAA 72 bp | GGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATaGAACTGGGAGTTGTATCGTCGCCTCCGTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: GFCWRGRRASWG*NWELYRRLRSS Trigger: AGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCAGAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CCA 72 bp | CGTCGCCTCCGTTCATCTGTCTCTTCTGCTTCCACCTaGCCTTGCTGGGATACCTGGCCTTGTACCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRLRSSVSSAST*PCWDTWPCTRA Trigger: GGCCCGGGTACAAGGCCAGGTATCCCAGCAAGGCCAGGTGGAAGCAGAAGAGACAGATGAACGGAGGCGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CCA 72 bp | TGCTGGCGGGGTCGCCGGGCCAGCTGGGGATTGAACTaGGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CWRGRRASWGLN*ELYRRLRSSVS Trigger: AGAGACAGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CAA 72 bp | TGGGCCTCGTCGCGCCGCACGCGGGCAACATTGTCCTaGTTCCGGACGTGCCAGCTCTTCTTCGGCAAGATA | + |
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Preference number: 6 (lower is better) Translates to: WASSRRTRATLS*FRTCQLFFGKI Trigger: TATCTTGCCGAAGAAGAGCTGGCACGTCCGGAACAAGGACAATGTTGCCCGCGTGCGGCGCGACGAGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CAA 90 bp | TTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATTGAACTGGGAGTaGTATCGTCGCCTCCGTTCATCTGTCTCTTCTGCTTCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: FCWRGRRASWGLNWE*YRRLRSSVSSASTW Trigger: CCAGGTGGAAGCAGAAGAGACAGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CAA 90 bp | GCAGGAGTTGGGTTCTGCTGGCGGGGTCGCCGGGCCAGCTGGGGATaGAACTGGGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AGVGFCWRGRRASWG*NWELYRRLRSSVSS Trigger: AGAAGAGACAGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCGCCAGCAGAACCCAACTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS TCA 72 bp | AGGGCCTCTGCTCGAGCTCTCTCGGCTGCTTCCCGCTaGAGACGCTCAGCACGGAGCTTTTCTAGGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: RASARALSAASR*RRSARSFSREG Trigger: ACCTTCCCTAGAAAAGCTCCGTGCTGAGCGTCTTCAGCGGGAAGCAGCCGAGAGAGCTCGAGCAGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CCA 72 bp | CAGCAGCTCCCTAAACAGGTCCACAGGGCCAGAACTTaGAGCTCCTGGGTCTGCTGCTTCCAGCTCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QQLPKQVHRART*SSWVCCFQLRH Trigger: GTGCCTGAGCTGGAAGCAGCAGACCCAGGAGCTCCAAGTTCTGGCCCTGTGGACCTGTTTAGGGAGCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CAA 72 bp | CGGGGTCGCCGGGCCAGCTGGGGATTGAACTGGGAGTaGTATCGTCGCCTCCGTTCATCTGTCTCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RGRRASWGLNWE*YRRLRSSVSSA Trigger: AGCAGAAGAGACAGATGAACGGAGGCGACGATACAACTCCCAGTTCAATCCCCAGCTGGCCCGGCGACCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS GCA 72 bp | GGAGTTGTATCGTCGCCTCCGTTCATCTGTCTCTTCTaGTTCCACCTGGCCTTGCTGGGATACCTGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GVVSSPPFICLF*FHLALLGYLAL Trigger: CAAGGCCAGGTATCCCAGCAAGGCCAGGTGGAAGCAGAAGAGACAGATGAACGGAGGCGACGATACAACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS TCA 72 bp | GCTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTCTTaGTCTTCTCATCTGGGCTTGGGCCTGGAGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASASLSRDPVGS*SSHLGLGLEGS Trigger: GCTGCCCTCCAGGCCCAAGCCCAGATGAGAAGATCAAGAACCGACTGGATCCCTTGAAAGAGATGCAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CCA 72 bp | CTGCTGCTTCCAGCTCAGGCACTGAGTTTCGTTGCCTaGCTTTCTTCCGTAGGAATTCCGTACGGGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLLPAQALSFVA*LSSVGIPYGPL Trigger: AAGAGGCCCGTACGGAATTCCTACGGAAGAAAGCCAGGCAACGAAACTCAGTGCCTGAGCTGGAAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS GCA 72 bp | TCTGAGGCCGTTCCTCTCTGGAAGGACGGCTTTCACTaGTGTGCCTTTTCTTTGCCAGGTGCTTCTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SEAVPLWKDGFH*CAFSLPGASAS Trigger: AGATGCAGAAGCACCTGGCAAAGAAAAGGCACAGCAGTGAAAGCCGTCCTTCCAGAGAGGAACGGCCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CAA 90 bp | GCCGTTCCTCTCTGGAAGGACGGCTTTCACTGCTGTGCCTTTTCTTaGCCAGGTGCTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: AVPLWKDGFHCCAFS*PGASASLSRDPVGS Trigger: AGAACCGACTGGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAAAGAAAAGGCACAGCAGTGAAAGCCGTCCTTCCAGAGAGGAACGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS GCA 72 bp | GGACGGCTTTCACTGCTGTGCCTTTTCTTTGCCAGGTaGTTCTGCATCTCTTTCAAGGGATCCAGTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GRLSLLCLFFAR*FCISFKGSSRF Trigger: GAACCGACTGGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAAAGAAAAGGCACAGCAGTGAAAGCCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS GCA 72 bp | TCTGGAAGGACGGCTTTCACTGCTGTGCCTTTTCTTTaGCAGGTGCTTCTGCATCTCTTTCAAGGGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: SGRTAFTAVPFL*QVLLHLFQGIQ Trigger: CTGGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAAAGAAAAGGCACAGCAGTGAAAGCCGTCCTTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS GCA 72 bp | CCTTTTCCCGTCGCTTCTCTTCCTCATGCTCTTTATTaGCTCTGGGAACTCCTTTCCTTTCTTCCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PFPVASLPHALY*LWELLSFLPAA Trigger: AGCTGCTGGAAGAAAGGAAAGGAGTTCCCAGAGGCAATAAAGAGCATGAGGAAGAGAAGCGACGGGAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS CAA 72 bp | TCCTTTTCCCGTCGCTTCTCTTCCTCATGCTCTTTATaGCCTCTGGGAACTCCTTTCCTTTCTTCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SFSRRFSSSCSL*PLGTPFLSSSS Trigger: GCTGCTGGAAGAAAGGAAAGGAGTTCCCAGAGGCAATAAAGAGCATGAGGAAGAGAAGCGACGGGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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| CDS GCA 72 bp | CTTTCACTGCTGTGCCTTTTCTTTGCCAGGTGCTTCTaGATCTCTTTCAAGGGATCCAGTCGGTTCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: LSLLCLFFARCF*ISFKGSSRFLI Trigger: GATCAAGAACCGACTGGATCCCTTGAAAGAGATGCAGAAGCACCTGGCAAAGAAAAGGCACAGCAGTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019878.8 |
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