Pregenerated sensors for LEMD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048661Ensembl transcript IDs: ENSMUST00000119093.2, ENSMUST00000119944.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGGTGCTCCTCATGTGCAGCCTGGCATACCTGAGCCGCACAAACTaGGTGAGACGTCCTTCTCTGCCTCCTAGGCACTGCCTGCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: PVLLMCSLAYLSRTN*VRRPSLPPRHCLPH Trigger: GTGAGGCAGGCAGTGCCTAGGAGGCAGAGAAGGACGTCTCACTCAGTTTGTGCGGCTCAGGTATGCCAGGCTGCACATGAGGAGCACCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 90 bp | AACTTGCATGGCCCAACATTCCAAGGAAATTTGTCTAGTACATTTTaGTGCAACAATGCACCCTGTTTTACACTGGACACAGAACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: NLHGPTFQGNLSSTF*CNNAPCFTLDTEQE Trigger: CTCCTGTTCTGTGTCCAGTGTAAAACAGGGTGCATTGTTGCAGCAAAATGTACTAGACAAATTTCCTTGGAATGTTGGGCCATGCAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 90 bp | AATCATACTGAAATAAACACTGAGGCACAAACCAATGGTCATTCGTaGACGATCTACACTGCAAACTTGCATGGCCCAACATTCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: NHTEINTEAQTNGHS*TIYTANLHGPTFQG Trigger: TCCTTGGAATGTTGGGCCATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTATTTCAGTATGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR CCA 90 bp | GCAGCAAATGAACCTTTTACAAGCAATAGGAACCTAAGGTTAAAGTaGGAAGTGAATGGTTTTACCACAGTGGCCTGTAAGGAACGATGC | + |
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Preference number: 1 (lower is better) Translates to: AANEPFTSNRNLRLK*EVNGFTTVACKERC Trigger: GCATCGTTCCTTACAGGCCACTGTGGTAAAACCATTCACTTCCCACTTTAACCTTAGGTTCCTATTGCTTGTAAAAGGTTCATTTGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 90 bp | ATTCACATTAGTTCACAAATTATGGAAATACAAAACAAGCTGCTTTaGCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCACGCCTA | + |
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Preference number: 1 (lower is better) Translates to: IHISSQIMEIQNKLL*HACPWFSNTLGARL Trigger: TAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAATTTGTGAACTAATGTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 90 bp | CAAAAATTCACATTAGTTCACAAATTATGGAAATACAAAACAAGCTaGTTTGCCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: QKFTLVHKLWKYKTS*FAMLVRGSLTLLVH Trigger: GTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAATTTGTGAACTAATGTGAATTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 90 bp | AAGTGGGAAGTGAATGGTTTTACCACAGTGGCCTGTAAGGAACGATaGGGCTTACTGTATACAAAAATTCACATTAGTTCACAAATTATG | + |
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Preference number: 1 (lower is better) Translates to: KWEVNGFTTVACKER*GLLYTKIHISSQIM Trigger: CATAATTTGTGAACTAATGTGAATTTTTGTATACAGTAAGCCGCATCGTTCCTTACAGGCCACTGTGGTAAAACCATTCACTTCCCACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR TCA 90 bp | AGAACAGGAGCTAACAGTTCTTTAAGCTATAAACAGACTGGGAAATaGCATAATCCCTTTAGTTCTGTCACAGTCCCAGTATTTATAATA | + |
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Preference number: 1 (lower is better) Translates to: RTGANSSLSYKQTGK*HNPFSSVTVPVFII Trigger: TATTATAAATACTGGGACTGTGACAGAACTAAAGGGATTATGTCATTTCCCAGTCTGTTTATAGCTTAAAGAACTGTTAGCTCCTGTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCTGCCTCCTAGGCACTaGCTGCCTCACTGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: NTEAQTNGHSCTIYTANLLPPRH*LPHCQS Trigger: GCTTTGGCAGTGAGGCAGGCAGTGCCTAGGAGGCAG...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR CAA 90 bp | AAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACACTCTaGGTGCACGCCTACAAGCACCATCTCGGAACCGCTTGCTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: KTSCFAMLVRGSLTL*VHAYKHHLGTACCQ Trigger: TTGACAGCAAGCGGTTCCGAGATGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCATCTCCTAGGCACTGCCTaGCTCACTGCCAAAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TEAQTNGHSCTIYTANLHLLGTA*LTAKAF Trigger: GAAGGCTTTGGCAGTGAGGCAGGCAGTGCCTAGGAG...ATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTTACACTGGACACAGAACAGGAGCTAACAGTTCTTTAAGCTATAAACAGGCCGCACAAACTGAGTaGGACGTCCTTCTCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LFYTGHRTGANSSLSYKQAAQTE*DVLLCL Trigger: GAGGCAGAGAAGGACGTCTCACTCAGTTTGTGCGGC...CTGTTTATAGCTTAAAGAACTGTTAGCTCCTGTTCTGTGTCCAGTGTAAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTCTGCCTCCTAGGCACTaGCTGCCTCACTGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFLPPRH*LPHCQS Trigger: GCTTTGGCAGTGAGGCAGGCAGTGCCTAGGAGGCAG...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCGGAACCTGAAGATTTaGAGAACTCTCAAACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: NTEAQTNGHSCTIYTANLRNLKI*RTLKQL Trigger: CAGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCG...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACCACTGCCTGCCTCACTaGCAAAGCCTTCGGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: ANADILTKQDFRYHQHLYHCLPH*QSLRNL Trigger: CAGGTTCCGAAGGCTTTGGCAGTGAGGCAGGCAGTG...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTCACTGCCTGCCTCACTaGCAAAGCCTTCGGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFHCLPH*QSLRNL Trigger: CAGGTTCCGAAGGCTTTGGCAGTGAGGCAGGCAGTG...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACATGGTTTTACCACAGTaGCCTGTAAGGAACGATGCG | + |
|
Preference number: 2 (lower is better) Translates to: INTEAQTNGHSCTIYTANMVLPQ*PVRNDA Trigger: CGCATCGTTCCTTACAGGCCACTGTGGTAAAACCAT...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CCA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGAAAGTGGGAAGTGAATaGTTTTACCACAGTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NTEAQTNGHSCTIYTANLKVGSE*FYHSGL Trigger: CAGGCCACTGTGGTAAAACCATTCACTTCCCACTTT...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTGCCGCACAAACTGAGTaGGACGTCCTTCTCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: ICQLLLYCSHKFELITAGAAQTE*DVLLCL Trigger: GAGGCAGAGAAGGACGTCTCACTCAGTTTGTGCGGC...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACAAAGTGGGAAGTGAATaGTTTTACCACAGTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: INTEAQTNGHSCTIYTANKVGSE*FYHSGL Trigger: CAGGCCACTGTGGTAAAACCATTCACTTCCCACTTT...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGATTTTGCTGCAACAATaGACCCTGTTTTACACTGGA | + |
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Preference number: 2 (lower is better) Translates to: NTEAQTNGHSCTIYTANLILLQQ*TLFYTG Trigger: TCCAGTGTAAAACAGGGTGCATTGTTGCAGCAAAAT...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR CAA 90 bp | ACGATCTACACTGCAAACTTGCATGGCCCAACATTCCAAGGAAATTaGTCTAGTACATTTTGCTGCAACAATGCACCCTGTTTTACACTG | + |
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Preference number: 2 (lower is better) Translates to: TIYTANLHGPTFQGN*SSTFCCNNAPCFTL Trigger: CAGTGTAAAACAGGGTGCATTGTTGCAGCAAAATGTACTAGACAAATTTCCTTGGAATGTTGGGCCATGCAAGTTTGCAGTGTAGATCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACATTTTGCTGCAACAATaGACCCTGTTTTACACTGGA | + |
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Preference number: 2 (lower is better) Translates to: INTEAQTNGHSCTIYTANILLQQ*TLFYTG Trigger: TCCAGTGTAAAACAGGGTGCATTGTTGCAGCAAAAT...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTATGGTTTTACCACAGTaGCCTGTAAGGAACGATGCG | + |
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Preference number: 2 (lower is better) Translates to: ICQLLLYCSHKFELITAGMVLPQ*PVRNDA Trigger: CGCATCGTTCCTTACAGGCCACTGTGGTAAAACCAT...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTCACTGCAAACTTGCATaGCCCAACATTCCAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFHCKLA*PNIPRK Trigger: TTTCCTTGGAATGTTGGGCCATGCAAGTTTGCAGTG...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTCGGAACCTGAAGATTTaGAGAACTCTCAAACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ICQLLLYCSHKFELITAGRNLKI*RTLKQL Trigger: CAGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCG...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTCTGTTTGATCATCTATaGCTGTACAGCCATATGTAT | + |
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Preference number: 2 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFLFDHL*LYSHMY Trigger: ATACATATGGCTGTACAGTCATAGATGATCAAACAG...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR TCA 72 bp | CTCATGTGCAGCCTGGCATACCTGAGCCGCACAAACTaGGTGAGACGTCCTTCTCTGCCTCCTAGGCACTGC | + |
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Preference number: 3 (lower is better) Translates to: LMCSLAYLSRTN*VRRPSLPPRHC Trigger: GCAGTGCCTAGGAGGCAGAGAAGGACGTCTCACTCAGTTTGTGCGGCTCAGGTATGCCAGGCTGCACATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 72 bp | GAAATAAACACTGAGGCACAAACCAATGGTCATTCGTaGACGATCTACACTGCAAACTTGCATGGCCCAACA | + |
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Preference number: 3 (lower is better) Translates to: EINTEAQTNGHS*TIYTANLHGPT Trigger: TGTTGGGCCATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 72 bp | CCAATGGTCATTCGTGCACGATCTACACTGCAAACTTaGATGGCCCAACATTCCAAGGAAATTTGTCTAGTA | + |
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Preference number: 3 (lower is better) Translates to: PMVIRARSTLQT*MAQHSKEICLV Trigger: TACTAGACAAATTTCCTTGGAATGTTGGGCCATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCATTCCAGTATCTGCCAATaGCTTCTTTATTGCTCACAT | + |
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Preference number: 3 (lower is better) Translates to: TEAQTNGHSCTIYTANLHSSICQ*LLYCSH Trigger: ATGTGAGCAATAAAGAAGCAATTGGCAGATACTGGA...ATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 72 bp | GGCCCAACATTCCAAGGAAATTTGTCTAGTACATTTTaGTGCAACAATGCACCCTGTTTTACACTGGACACA | + |
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Preference number: 3 (lower is better) Translates to: GPTFQGNLSSTF*CNNAPCFTLDT Trigger: TGTGTCCAGTGTAAAACAGGGTGCATTGTTGCAGCAAAATGTACTAGACAAATTTCCTTGGAATGTTGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTTCGGAACCTGAAGATTaGCAGAACTCTCAAACAGCT | + |
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Preference number: 3 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFSEPED*QNSQTA Trigger: AGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCGA...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CAA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACTCGGAACCTGAAGATTaGCAGAACTCTCAAACAGCT | + |
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Preference number: 3 (lower is better) Translates to: ANADILTKQDFRYHQHLYSEPED*QNSQTA Trigger: AGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCGA...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTATCTACACTGCAAACTaGCATGGCCCAACATTCCAA | + |
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Preference number: 3 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFIYTAN*HGPTFQ Trigger: TTGGAATGTTGGGCCATGCAAGTTTGCAGTGTAGAT...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR GCA 72 bp | CCAACATTCCAAGGAAATTTGTCTAGTACATTTTGCTaGAACAATGCACCCTGTTTTACACTGGACACAGAA | + |
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Preference number: 3 (lower is better) Translates to: PTFQGNLSSTFC*NNAPCFTLDTE Trigger: TTCTGTGTCCAGTGTAAAACAGGGTGCATTGTTGCAGCAAAATGTACTAGACAAATTTCCTTGGAATGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR TCA 72 bp | GCTAACAGTTCTTTAAGCTATAAACAGACTGGGAAATaGCATAATCCCTTTAGTTCTGTCACAGTCCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: ANSSLSYKQTGK*HNPFSSVTVPV Trigger: TACTGGGACTGTGACAGAACTAAAGGGATTATGTCATTTCCCAGTCTGTTTATAGCTTAAAGAACTGTTAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR TCA 72 bp | ATTCCAGCTGTTTCACATCTTCCCTTGGACCAACAATaGTCTATCCAGCAGGTTATTTTTCAAAAAGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: IPAVSHLPLDQQ*SIQQVIFQKAN Trigger: ATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGAAGATGTGAAACAGCTGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTTTTACACTGGACACAGAACAGGAGCTAACAGTTCTTTAAGCTATAAACAGATTGCTCACATAAATTaGAACTCATTACAGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: LFYTGHRTGANSSLSYKQIAHIN*NSLQLV Trigger: CACCAGCTGTAATGAGTTCAAATTTATGTGAGCAAT...CTGTTTATAGCTTAAAGAACTGTTAGCTCCTGTTCTGTGTCCAGTGTAAAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTATTGCTCACATAAATTaGAACTCATTACAGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFIAHIN*NSLQLV Trigger: CACCAGCTGTAATGAGTTCAAATTTATGTGAGCAAT...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS-3UTR GCA 90 bp | GCTGTCAAGCCGGTGCTCCTCATGTGCAGCCTGGCATACCTGAGCCGCACAAACCCAGCAGCACTTTGCTaGCCGCCGCGGGGACGGCCG | + |
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Preference number: 4 (lower is better) Translates to: AVKPVLLMCSLAYLSRTNPAALC*PPRGRP Trigger: CGGCCGTCCCCGCGGCGGGCAGCAAAGTGCTGCTGG...GTTTGTGCGGCTCAGGTATGCCAGGCTGCACATGAGGAGCACCGGCTTGACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS-3UTR TCA 90 bp | TGCCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCACGCCTACAAGCACCATCATCCGAGAGCTGCTaGGGCGCCGCCGCCGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: CHACPWFSNTLGARLQAPSSESC*GAAAAV Trigger: GACGGCGGCGGCGGCGCCTCAGCAGCTCTCGGATGA...TGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS-3UTR TCA 90 bp | GCTGTCAAGCCGGTGCTCCTCATGTGCAGCCTGGCATACCTGAGCCGCACAAACGCTTCTTCAGCTTCTTaGGGTAGACGGGCCGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AVKPVLLMCSLAYLSRTNASSAS*GRRAGC Trigger: GCACCCGGCCCGTCTACCTCAAGAAGCTGAAGAAGC...GTTTGTGCGGCTCAGGTATGCCAGGCTGCACATGAGGAGCACCGGCTTGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| 3UTR CAA 72 bp | CTTGGTGCACGCCTACAAGCACCATCTCGGAACCGCTaGCTGTCAAGCCGGTGCTCCTCATGTGCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGARLQAPSRNR*LSSRCSSCAAW Trigger: CCAGGCTGCACATGAGGAGCACCGGCTTGACAGCAAGCGGTTCCGAGATGGTGCTTGTAGGCGTGCACCAAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS-3UTR CCA 90 bp | GCTTGCTGTCAAGCCGGTGCTCCTCATGTGCAGCCTGGCATACCTGAGCCGCACAGGGCATCTGGGGCCTaGTGGACTGTAAAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACCQAGAPHVQPGIPEPHRASGA*WTVKTA Trigger: TGCAGTTTTTACAGTCCACCAGGCCCCAGATGCCCT...GTGCGGCTCAGGTATGCCAGGCTGCACATGAGGAGCACCGGCTTGACAGCAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACGCGCCGGTGGGGCTCTaGGCCCGCGGTACTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANAPVGL*ARGTGA Trigger: CGCTCCAGTACCGCGGGCTCAGAGCCCCACCGGCGC...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCCTGCTCCCGCGGGCTaGCCTCCACGTCCGACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NTEAQTNGHSCTIYTANLPAPAG*PPRPTR Trigger: ACGAGTCGGACGTGGAGGCCAGCCCGCGGGAGCAGG...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACAGCCCAGCAGCACTTTaGTGCCCGCCGCGGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANSPAAL*CPPRGR Trigger: CCGTCCCCGCGGCGGGCAGCAAAGTGCTGCTGGGCT...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCTCCGTCTGGGTCGATaGCGGGCGAGGGAGTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTEAQTNGHSCTIYTANLLRLGR*RARESS Trigger: GGACGACTCCCTCGCCCGGCATCGACCCAGACGGAG...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | TGCCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCACGCCTACAAGCACCAGTCATTCATCGCGAGTaGTCCCCCTCCCTGAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: CHACPWFSNTLGARLQAPVIHRE*SPSLNR Trigger: TCGGTTCAGGGAGGGGGAGCACTCGCGATGAATGAC...TGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACCTGAGCCCGCGGTACTaGAGCGCAGCCCGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANLSPRY*SAARSL Trigger: GAGGGACCGGGCTGCGCTCCAGTACCGCGGGCTCAG...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACATCATCCGAGAGCTGCTaGGGCGCCGCCGCCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTSSESC*GAAAAV Trigger: GACGGCGGCGGCGGCGCCTCAGCAGCTCTCGGATGA...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTCAAGCCGGTGCTCCTCATGTGCAGCCTGGCATACCTGAGCCGCACAAACTGGGGAAAGCGATGGTaGTATCTATCTAGTCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVKPVLLMCSLAYLSRTNWGKRW*YLSSRK Trigger: CTTACGACTAGATAGATACCACCATCGCTTTCCCCA...GTTTGTGCGGCTCAGGTATGCCAGGCTGCACATGAGGAGCACCGGCTTGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| 3UTR CAA 72 bp | TGCTTTGCCATGCTTGTCCGTGGTTCTCTAACACTCTaGGTGCACGCCTACAAGCACCATCTCGGAACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFAMLVRGSLTL*VHAYKHHLGTA Trigger: AGCGGTTCCGAGATGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | TGCCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCACGCCTACAAGCACCACCAGTATGGTTGGCGTaGTTGATCCTGAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CHACPWFSNTLGARLQAPPVWLA*LILSVP Trigger: TGGCACACTCAGGATCAACCACGCCAACCATACTGG...TGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCATGCTTCTTCAGCTTCTTaGGGTAGACGGGCCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TEAQTNGHSCTIYTANLHASSAS*GRRAGC Trigger: GCACCCGGCCCGTCTACCTCAAGAAGCTGAAGAAGC...ATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACCCGACTCGTCCGAGCTaGAGCCCAGCAGCACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANPTRPS*SPAALC Trigger: GCAAAGTGCTGCTGGGCTTCAGCTCGGACGAGTCGG...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | AGGAACGATGCGGCTTACTGTATACAAAAATTCACATTAGTTCACAAATTATGGGCGCCGGTGGGGCTCTaGGCCCGCGGTACTGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RNDAAYCIQKFTLVHKLWAPVGL*ARGTGA Trigger: CGCTCCAGTACCGCGGGCTCAGAGCCCCACCGGCGC...CCATAATTTGTGAACTAATGTGAATTTTTGTATACAGTAAGCCGCATCGTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCATCCTTTAATACCTGTCTaGCCGGGGCCACGTCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TEAQTNGHSCTIYTANLHPLIPV*PGPRRR Trigger: ACGGCGACGTGGCCCCGGCCAGACAGGTATTAAAGG...ATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCGGGAGGGAGGCTGTTaGCATACAGACCGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTEAQTNGHSCTIYTANLREGGC*HTDRGN Trigger: ATTCCCCCGGTCTGTATGCCAACAGCCTCCCTCCCG...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACAAGTGCTCCCCCTCCCTaGACCGAAGTCTCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTSAPPP*TEVSCR Trigger: CCGGCAGGAGACTTCGGTTCAGGGAGGGGGAGCACT...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACAGCCCAGCAGCACTTTaGTGCCCGCCGCGGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYSPAAL*CPPRGR Trigger: CCGTCCCCGCGGCGGGCAGCAAAGTGCTGCTGGGCT...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | TCGGAACCTGAAGATTTGCAGAACTCTCAAACAGCTGTCTTCAGCAATAAAAATCTCCGTCTGGGTCGATaGCGGGCGAGGGAGTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEPEDLQNSQTAVFSNKNLRLGR*RARESS Trigger: GGACGACTCCCTCGCCCGGCATCGACCCAGACGGAG...ATTTTTATTGCTGAAGACAGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACCCTGCTCCCGCGGGCTaGCCTCCACGTCCGACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYPAPAG*PPRPTR Trigger: ACGAGTCGGACGTGGAGGCCAGCCCGCGGGAGCAGG...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTCTGAGCCCGCGGTACTaGAGCGCAGCCCGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFLSPRY*SAARSL Trigger: GAGGGACCGGGCTGCGCTCCAGTACCGCGGGCTCAG...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGTGCTGCTGTTGCTGCTaGTCTTCCTCGCGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTEAQTNGHSCTIYTANLCCCCC*SSSRSF Trigger: GAAGCTTCGCGAGGAAGAGCAGCAGCAACAGCAGCA...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCATTGCTGTTGCTGCTGTTaGTGCTGCTCTTCCTCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TEAQTNGHSCTIYTANLHCCCCC*CCSSSR Trigger: TCGCGAGGAAGAGCAGCAGCAACAGCAGCAACAGCA...ATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | TGCCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCACGCCTACAAGCACCAATCTTTTTCCTGTCCTaGGGCTGTATTAGGGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: CHACPWFSNTLGARLQAPIFFLS*GCIRES Trigger: CGATTCCCTAATACAGCCGCAGGACAGGAAAAAGAT...TGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCATCACCAGAAGGGCATCTaGGGCCTGGTGGACTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEAQTNGHSCTIYTANLHHQKGI*GLVDCK Trigger: TTTACAGTCCACCAGGCCCCAGATGCCCTTCTGGTG...ATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTGCTGCTGTTGCTGCTaGTCTTCCTCGCGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANCCCCC*SSSRSF Trigger: GAAGCTTCGCGAGGAAGAGCAGCAGCAACAGCAGCA...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTGCTGTTGCTGCTGTTaGTGCTGCTCTTCCTCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANCCCCC*CCSSSR Trigger: TCGCGAGGAAGAGCAGCAGCAACAGCAGCAACAGCA...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACGATGCGGCTTACTGTATACAAAAATTCACATTAGTTCACAAATTATGGCGTTCACCGTTCGGCTaGCCCACAGCGGCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RNDAAYCIQKFTLVHKLWRSPFG*PTAAPR Trigger: CCGAGGAGCCGCTGTGGGCCAGCCGAACGGTGAACG...CCATAATTTGTGAACTAATGTGAATTTTTGTATACAGTAAGCCGCATCGTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCATAGGGCATCTGGGGCCTaGTGGACTGTAAAAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEAQTNGHSCTIYTANLHRASGA*WTVKTA Trigger: TGCAGTTTTTACAGTCCACCAGGCCCCAGATGCCCT...ATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTAGTGCTCCCCCTCCCTaGACCGAAGTCTCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ICQLLLYCSHKFELITAGSAPPP*TEVSCR Trigger: CCGGCAGGAGACTTCGGTTCAGGGAGGGGGAGCACT...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACACCATGTCATACATCTaGCTCGTCTCCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANTMSYI*LVSSSS Trigger: GGAGGAGGAGGAGACGAGGCAGATGTATGACATGGT...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACCCAGTATGGTTGGCGTaGTTGATCCTGAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANPVWLA*LILSVP Trigger: TGGCACACTCAGGATCAACCACGCCAACCATACTGG...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | TGCCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCACGCCTACAAGCACCAGTTCATATGTTTATTTaGTGGCTTCAAGGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CHACPWFSNTLGARLQAPVHMFI*WLQGSV Trigger: AACACTCCCTTGAAGCCAGCAAATAAACATATGAAC...TGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATATTCGGGAGGGAGGCTGTTaGCATACAGACCGGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EKDASASKGDLFKCHNYIREGGC*HTDRGN Trigger: ATTCCCCCGGTCTGTATGCCAACAGCCTCCCTCCCG...AATATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACAGGGAGTGTTGCAAGTaGGGGCCTGGGGAAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYRECCK*GPGESD Trigger: ATCGCTTTCCCCAGGCCCTCACTTGCAACACTCCCT...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACGTCATTCATCGCGAGTaGTCCCCCTCCCTGAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYVIHRE*SPSLNR Trigger: TCGGTTCAGGGAGGGGGAGCACTCGCGATGAATGAC...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACGATGCGGCTTACTGTATACAAAAATTCACATTAGTTCACAAATTATGGCCTTTAATACCTGTCTaGCCGGGGCCACGTCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RNDAAYCIQKFTLVHKLWPLIPV*PGPRRR Trigger: ACGGCGACGTGGCCCCGGCCAGACAGGTATTAAAGG...CCATAATTTGTGAACTAATGTGAATTTTTGTATACAGTAAGCCGCATCGTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACAGAACTGCCACATTCATaGTCTCCTGCAATCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTELPHS*SPAIWA Trigger: GGCCCAGATTGCAGGAGACCATGAATGTGGCAGTTC...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | TCGGAACCTGAAGATTTGCAGAACTCTCAAACAGCTGTCTTCAGCAATAAAAATCACCAGAAGGGCATCTaGGGCCTGGTGGACTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEPEDLQNSQTAVFSNKNHQKGI*GLVDCK Trigger: TTTACAGTCCACCAGGCCCCAGATGCCCTTCTGGTG...ATTTTTATTGCTGAAGACAGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTCAAGACGCAGAGGGCTaGATCCACCGCCAGACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFQDAEG*IHRQTR Trigger: TCTAGTCTGGCGGTGGATCCAGCCCTCTGCGTCTTG...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTAGGGAGTGTTGCAAGTaGGGGCCTGGGGAAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ICQLLLYCSHKFELITAGRECCK*GPGESD Trigger: ATCGCTTTCCCCAGGCCCTCACTTGCAACACTCCCT...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTCAAGACGCAGAGGGCTaGATCCACCGCCAGACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ICQLLLYCSHKFELITAGQDAEG*IHRQTR Trigger: TCTAGTCTGGCGGTGGATCCAGCCCTCTGCGTCTTG...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| 3UTR CAA 72 bp | ACCAATGGTCATTCGTGCACGATCTACACTGCAAACTaGCATGGCCCAACATTCCAAGGAAATTTGTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TNGHSCTIYTAN*HGPTFQGNLSS Trigger: ACTAGACAAATTTCCTTGGAATGTTGGGCCATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| 3UTR CAA 72 bp | TTATACACATTCCCATCTGTCTTACAGGGAGGACTCTaGGTCGGCTTAAGAGTTCCAGGTAAAATAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYTFPSVLQGGL*VGLRVPGKISC Trigger: GCAGCTTATTTTACCTGGAACTCTTAAGCCGACCAAGAGTCCTCCCTGTAAGACAGATGGGAATGTGTATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTTTACACTGGACACAGAACAGGAGCTAACAGTTCTTTAAGCTATAAACAGATCGCCAGGTGCCAGTaGTCTCCTATTTCCATAACC | + |
|
Preference number: 4 (lower is better) Translates to: LFYTGHRTGANSSLSYKQIARCQ*SPISIT Trigger: GGTTATGGAAATAGGAGATCACTGGCACCTGGCGAT...CTGTTTATAGCTTAAAGAACTGTTAGCTCCTGTTCTGTGTCCAGTGTAAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTACCATGTCATACATCTaGCTCGTCTCCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFTMSYI*LVSSSS Trigger: GGAGGAGGAGGAGACGAGGCAGATGTATGACATGGT...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATAGGAATCGCGGACATGTaGAAGAGGCATGTAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKRMHLHQKVTCLNATTIGIADM*KRHVRL Trigger: CAGCCTTACATGCCTCTTCCACATGTCCGCGATTCC...TATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | TCGGAACCTGAAGATTTGCAGAACTCTCAAACAGCTGTCTTCAGCAATAAAAATGCCTGGGGAAAGCGATaGTGGTATCTATCTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SEPEDLQNSQTAVFSNKNAWGKR*WYLSSR Trigger: ACGACTAGATAGATACCACCATCGCTTTCCCCAGGC...ATTTTTATTGCTGAAGACAGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| 3UTR CAA 72 bp | ACTGCAAACTTGCATGGCCCAACATTCCAAGGAAATTaGTCTAGTACATTTTGCTGCAACAATGCACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TANLHGPTFQGN*SSTFCCNNAPC Trigger: ACAGGGTGCATTGTTGCAGCAAAATGTACTAGACAAATTTCCTTGGAATGTTGGGCCATGCAAGTTTGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACATCGCCAGGTGCCAGTaGTCTCCTATTTCCATAACC | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYIARCQ*SPISIT Trigger: GGTTATGGAAATAGGAGATCACTGGCACCTGGCGAT...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACAATCTTTTTCCTGTCCTaGGGCTGTATTAGGGAATCG | + |
|
Preference number: 4 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTIFFLS*GCIRES Trigger: CGATTCCCTAATACAGCCGCAGGACAGGAAAAAGAT...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTCAAACCAAGAGCCATaGAATGCTTTAAAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: INTEAQTNGHSCTIYTANSNQEP*NALKAF Trigger: GAAGGCTTTTAAAGCATTGCATGGCTCTTGGTTTGA...GTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTTCAGGTAGGTGTGATTaGAGCCAGTATGGTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFSGRCD*SQYGWR Trigger: ACGCCAACCATACTGGCTCCAATCACACCTACCTGA...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACTCCCGTTTAAACTGCTaGAGAAGTTCCTCTTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYSRLNC*RSSSSG Trigger: GCCCGAAGAGGAACTTCTCCAGCAGTTTAAACGGGA...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTTCCCGTTTAAACTGCTaGAGAAGTTCCTCTTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFSRLNC*RSSSSG Trigger: GCCCGAAGAGGAACTTCTCCAGCAGTTTAAACGGGA...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTGAACTGCCACATTCATaGTCTCCTGCAATCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ICQLLLYCSHKFELITAGELPHS*SPAIWA Trigger: GGCCCAGATTGCAGGAGACCATGAATGTGGCAGTTC...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACGATGCGGCTTACTGTATACAAAAATTCACATTAGTTCACAAATTATGGGGAATCGCGGACATGTaGAAGAGGCATGTAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNDAAYCIQKFTLVHKLWGIADM*KRHVRL Trigger: CAGCCTTACATGCCTCTTCCACATGTCCGCGATTCC...CCATAATTTGTGAACTAATGTGAATTTTTGTATACAGTAAGCCGCATCGTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATATTGCCTGGGGAAAGCGATaGTGGTATCTATCTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EKDASASKGDLFKCHNYIAWGKR*WYLSSR Trigger: ACGACTAGATAGATACCACCATCGCTTTCCCCAGGC...AATATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACAACAGAAAGCATCCTTTaGCTAGAACTGCCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTTESIL*LELPHS Trigger: TGAATGTGGCAGTTCTAGTCAAAGGATGCTTTCTGT...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATATCCTCCCGTTTAAACTaGTGGAGAAGTTCCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KKRMHLHQKVTCLNATTISSRLN*WRSSSS Trigger: CGAAGAGGAACTTCTCCAGCAGTTTAAACGGGAGGA...TATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | AGGAACGATGCGGCTTACTGTATACAAAAATTCACATTAGTTCACAAATTATGGTCAGGTAGGTGTGATTaGAGCCAGTATGGTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RNDAAYCIQKFTLVHKLWSGRCD*SQYGWR Trigger: ACGCCAACCATACTGGCTCCAATCACACCTACCTGA...CCATAATTTGTGAACTAATGTGAATTTTTGTATACAGTAAGCCGCATCGTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTGCATCTGGGGCCTGGTaGACTGTAAAAACTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ICQLLLYCSHKFELITAGASGAW*TVKTAH Trigger: ATGTGCAGTTTTTACAGTCCACCAGGCCCCAGATGC...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTTCCTCCCGTTTAAACTaGTGGAGAAGTTCCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ICQLLLYCSHKFELITAGSSRLN*WRSSSS Trigger: CGAAGAGGAACTTCTCCAGCAGTTTAAACGGGAGGA...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACTGGGGAAAGCGATGGTaGTATCTATCTAGTCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYWGKRW*YLSSRK Trigger: CTTACGACTAGATAGATACCACCATCGCTTTCCCCA...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTACAGAAAGCATCCTTTaGCTAGAACTGCCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFTESIL*LELPHS Trigger: TGAATGTGGCAGTTCTAGTCAAAGGATGCTTTCTGT...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACATGGCAAGCTTCATTATaGCTTCGCAAAACATCTATA | + |
|
Preference number: 4 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTWQASL*LRKTSI Trigger: TATAGATGTTTTGCGAAGTCATAATGAAGCTTGCCA...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| 3UTR CAA 72 bp | GTATCTGCCAATTGCTTCTTTATTGCTCACATAAATTaGAACTCATTACAGCTGGTGCCAGAACTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VSANCFFIAHIN*NSLQLVPELLH Trigger: GTGTAGAAGTTCTGGCACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACTCAAACCAAGAGCCATaGAATGCTTTAAAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYSNQEP*NALKAF Trigger: GAAGGCTTTTAAAGCATTGCATGGCTCTTGGTTTGA...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACCATATGTTTATTTGCTaGCTTCAAGGGAGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ANADILTKQDFRYHQHLYHMFIC*LQGSVA Trigger: TGCAACACTCCCTTGAAGCCAGCAAATAAACATATG...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATACATATGTTTATTTGCTaGCTTCAAGGGAGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKRMHLHQKVTCLNATTIHMFIC*LQGSVA Trigger: TGCAACACTCCCTTGAAGCCAGCAAATAAACATATG...TATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATATTTGGCAAGCTTCATTATaGCTTCGCAAAACATCTATA | + |
|
Preference number: 4 (lower is better) Translates to: EKDASASKGDLFKCHNYIWQASL*LRKTSI Trigger: TATAGATGTTTTGCGAAGTCATAATGAAGCTTGCCA...AATATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATAGTGGACTGTAAAAACTaGACATCAGTTATGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKRMHLHQKVTCLNATTIVDCKN*TSVMFV Trigger: GACAAACATAACTGATGTGCAGTTTTTACAGTCCAC...TATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | GAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATATTGTTCATATGTTTATTTaGTGGCTTCAAGGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EKDASASKGDLFKCHNYIVHMFI*WLQGSV Trigger: AACACTCCCTTGAAGCCAGCAAATAAACATATGAAC...AATATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR GCA 90 bp | AGGAACGATGCGGCTTACTGTATACAAAAATTCACATTAGTTCACAAATTATGGGTGGACTGTAAAAACTaGACATCAGTTATGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNDAAYCIQKFTLVHKLWVDCKN*TSVMFV Trigger: GACAAACATAACTGATGTGCAGTTTTTACAGTCCAC...CCATAATTTGTGAACTAATGTGAATTTTTGTATACAGTAAGCCGCATCGTTCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS TCA 90 bp | CCGCCTGCTCCCGCGGGCTGGCCTCCACGTCCGACTCGTCCGAGCTaGAGCCCAGCAGCACTTTGCTGCCCGCCGCGGGGACGGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPAPAGWPPRPTRPS*SPAALCCPPRGRPP Trigger: CGGCGGCCGTCCCCGCGGCGGGCAGCAAAGTGCTGCTGGGCTTCAGCTCGGACGAGTCGGACGTGGAGGCCAGCCCGCGGGAGCAGGCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 90 bp | AGTCCGAGTAGTGCTCCCGGCAGCTGCTGTAGGGGAGAAGCCGGCTaGCGTTCACCGTTCGGCTGGCCCACAGCGGCTCCTCGGCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSAPGSCCRGEAG*RSPFGWPTAAPRPR Trigger: CCGAGGCCGAGGAGCCGCTGTGGGCCAGCCGAACGGTGAACGGCAGCCGGCTTCTCCCCTACAGCAGCTGCCGGGAGCACTACTCGGACT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 90 bp | CCTCCTCCTCCTCCTCCTCCGAGTCCGAGTAGTGCTCCCGGCAGCTaGTGTAGGGGAGAAGCCGGCTGCCGTTCACCGTTCGGCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPPPPPPSPSSAPGS*CRGEAGCRSPFGWP Trigger: GGGCCAGCCGAACGGTGAACGGCAGCCGGCTTCTCCCCTACAGCAGCTGCCGGGAGCACTACTCGGACTCGGAGGAGGAGGAGGAGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 90 bp | GGCCAGCTTCTTCGCGCCGGCACGGTATCGAGGAATGGAGTCCACTaGATCGCACCCGCACCCTCCTCCTCCTCCTCCTCCCGGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQLLRAGTVSRNGVH*IAPAPSSSSSSRLG Trigger: GCCGAGCCGGGAGGAGGAGGAGGAGGAGGGTGCGGGTGCGATCCAGTGGACTCCATTCCTCGATACCGTGCCGGCGCGAAGAAGCTGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS TCA 90 bp | CCCGCGGCCGCCGCCCTGTCATTCATCGCGAGTGCTCCCCCTCCCTaGACCGAAGTCTCCTGCCGGCTGCCGCCAGATTTAGCAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAAAALSFIASAPPP*TEVSCRLPPDLAVS Trigger: GCTGACTGCTAAATCTGGCGGCAGCCGGCAGGAGACTTCGGTTCAGGGAGGGGGAGCACTCGCGATGAATGACAGGGCGGCGGCCGCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 90 bp | GTCTGGGTCGATGCCGGGCGAGGGAGTCGTCCTTTAATACCTGTCTaGCCGGGGCCACGTCGCCGTCCTCCTCCCCCTCCTCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VWVDAGRGSRPLIPV*PGPRRRPPPPPPPP Trigger: AGGAGGAGGAGGAGGGGGAGGAGGACGGCGACGTGGCCCCGGCCAGACAGGTATTAAAGGACGACTCCCTCGCCCGGCATCGACCCAGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 90 bp | ACAGCAGCGGGGCCAGCTTCTTCGCGCCGGCACGGTATCGAGGAATaGAGTCCACTGGATCGCACCCGCACCCTCCTCCTCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TAAGPASSRRHGIEE*SPLDRTRTLLLLLL Trigger: GAGGAGGAGGAGGAGGAGGGTGCGGGTGCGATCCAGTGGACTCCATTCCTCGATACCGTGCCGGCGCGAAGAAGCTGGCCCCGCTGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 90 bp | GCAGTCAGCGCCGAGAACGGCTTACTATGGCTCCGTCTGGGTCGATaGCGGGCGAGGGAGTCGTCCTTTAATACCTGTCTGGCCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVSAENGLLWLRLGR*RARESSFNTCLAGA Trigger: GGCCCCGGCCAGACAGGTATTAAAGGACGACTCCCTCGCCCGGCATCGACCCAGACGGAGCCATAGTAAGCCGTTCTCGGCGCTGACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS TCA 90 bp | GCTGCTGTTGCTGCTGCTCTTCCTCGCGAAGCTTCTTCAGCTTCTTaGGGTAGACGGGCCGGGTGCTCTCCGTCACGGGACCCGGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: AAVAAALPREASSAS*GRRAGCSPSRDPEI Trigger: TATCTCCGGGTCCCGTGACGGAGAGCACCCGGCCCGTCTACCTCAAGAAGCTGAAGAAGCTTCGCGAGGAAGAGCAGCAGCAACAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 90 bp | CGGCTGCCGCCAGATTTAGCAGTCAGCGCCGAGAACGGCTTACTATaGCTCCGTCTGGGTCGATGCCGGGCGAGGGAGTCGTCCTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLPPDLAVSAENGLL*LRLGRCRARESSFN Trigger: ATTAAAGGACGACTCCCTCGCCCGGCATCGACCCAGACGGAGCCATAGTAAGCCGTTCTCGGCGCTGACTGCTAAATCTGGCGGCAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGCTGTCAAGCCGGTGCTCCTCATGTGCAGCCTGGCATACCTGAGCCGCACTTGGAGCCAGTATGGTaGGCGTGGTTGATCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ACCQAGAPHVQPGIPEPHLEPVW*AWLILS Trigger: ACTCAGGATCAACCACGCCAACCATACTGGCTCCAA...GTGCGGCTCAGGTATGCCAGGCTGCACATGAGGAGCACCGGCTTGACAGCAAGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGAAGCCCAGCAGCACTTaGCTGCCCGCCGCGGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: NTEAQTNGHSCTIYTANLKPSST*LPAAGT Trigger: CGTCCCCGCGGCGGGCAGCAAAGTGCTGCTGGGCTT...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCACGCCTACAAGCACCAGGCTTCAAGGGAGTGTaGCAAGTGAGGGCCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CHACPWFSNTLGARLQAPGFKGV*QVRAWG Trigger: TCCCCAGGCCCTCACTTGCAACACTCCCTTGAAGCC...TGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 90 bp | GCCAGTCCGCAGGCGCAGGTGAGACAGAGAGTTCATATGTTTATTTaGTGGCTTCAAGGGAGTGTTGCAAGTGAGGGCCTGGGGAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ASPQAQVRQRVHMFI*WLQGSVASEGLGKA Trigger: CGCTTTCCCCAGGCCCTCACTTGCAACACTCCCTTGAAGCCAGCAAATAAACATATGAACTCTCTGTCTCACCTGCGCCTGCGGACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 90 bp | AGACACAGCCCTCCCGCGAGTTCCTGTCTACGGCAATATGAACGATaGCGTCATTGTCACTGCACTTCTCTAAAATCGCTTCTTGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RHSPPASSCLRQYER*RHCHCTSLKSLLGS Trigger: CGATCCAAGAAGCGATTTTAGAGAAGTGCAGTGACAATGACGGCATCGTTCATATTGCCGTAGACAGGAACTCGCGGGAGGGCTGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 90 bp | GTCACAGTAATGAAAGCACGCCGGAAACGGCACCAGAAGGGCATCTaGGGCCTGGTGGACTGTAAAAACTGCACATCAGTTATGTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VTVMKARRKRHQKGI*GLVDCKNCTSVMFV Trigger: GACAAACATAACTGATGTGCAGTTTTTACAGTCCACCAGGCCCCAGATGCCCTTCTGGTGCCGTTTCCGGCGTGCTTTCATTACTGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATGCTTGTCCGTGGTTCTCTAACACTCTTGGTGCACGCCTACAAGCACCAGGTATAACTAATGTCTaGTCACAAGACGCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CHACPWFSNTLGARLQAPGITNV*SQDAEG Trigger: GCCCTCTGCGTCTTGTGACAAGACATTAGTTATACC...TGGTGCTTGTAGGCGTGCACCAAGAGTGTTAGAGAACCACGGACAAGCATGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 90 bp | GCAACGCACACCAGCACTACACCTAAACATAACAACAATAACCTATaGGTCACAGTAATGAAAGCACGCCGGAAACGGCACCAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATHTSTTPKHNNNNL*VTVMKARRKRHQKG Trigger: GCCCTTCTGGTGCCGTTTCCGGCGTGCTTTCATTACTGTGACCCATAGGTTATTGTTGTTATGTTTAGGTGTAGTGCTGGTGTGCGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 90 bp | ACTTTAGAGGGTATAACTAATGTCTTGTCACAAGACGCAGAGGGCTaGATCCACCGCCAGACTAGAAAGTCTGCACCGCCTACTCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TLEGITNVLSQDAEG*IHRQTRKSAPPTLR Trigger: TCGAAGAGTAGGCGGTGCAGACTTTCTAGTCTGGCGGTGGATCCAGCCCTCTGCGTCTTGTGACAAGACATTAGTTATACCCTCTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTAAGCCCAGCAGCACTTaGCTGCCCGCCGCGGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: ICQLLLYCSHKFELITAGKPSST*LPAAGT Trigger: CGTCCCCGCGGCGGGCAGCAAAGTGCTGCTGGGCTT...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | AACACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGGCCGTCGCCGTGTTATaGTTATTACTGTTCCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: NTEAQTNGHSCTIYTANLAVAVL*LLLFRV Trigger: GACGCGGAACAGTAATAACAATAACACGGCGACGGC...CAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | TCGGAACCTGAAGATTTGCAGAACTCTCAAACAGCTGTCTTCAGCAATAAAAATGGCTTCAAGGGAGTGTaGCAAGTGAGGGCCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SEPEDLQNSQTAVFSNKNGFKGV*QVRAWG Trigger: TCCCCAGGCCCTCACTTGCAACACTCCCTTGAAGCC...ATTTTTATTGCTGAAGACAGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS TCA 90 bp | GAGAGTTCATATGTTTATTTGCTGGCTTCAAGGGAGTGTTGCAAGTaGGGGCCTGGGGAAAGCGATGGTGGTATCTATCTAGTCGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESSYVYLLASRECCK*GPGESDGGIYLVVS Trigger: ACTTACGACTAGATAGATACCACCATCGCTTTCCCCAGGCCCTCACTTGCAACACTCCCTTGAAGCCAGCAAATAAACATATGAACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACAGCCGTCGCCGTGTTATaGTTATTACTGTTCCGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTAVAVL*LLLFRV Trigger: GACGCGGAACAGTAATAACAATAACACGGCGACGGC...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTGGACCAACAATGATCTATCCAGCAGGTTATTTTTCAAAAAGCCAATTTGTATGGTTGGCGTGGTaGATCCTGAGTGTGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGPTMIYPAGYFSKSQFVWLAW*ILSVPG Trigger: CCCTGGCACACTCAGGATCAACCACGCCAACCATAC...AAATTGGCTTTTTGAAAAATAACCTGCTGGATAGATCATTGTTGGTCCAAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGCACAAACCAATGGTCATTCGTGCACGATCTACACTGCAAACTTGCATGACAGAAAGCATCCTTaGACTAGAACTGCCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: TEAQTNGHSCTIYTANLHDRKHP*TRTATF Trigger: GAATGTGGCAGTTCTAGTCAAAGGATGCTTTCTGTC...ATGCAAGTTTGCAGTGTAGATCGTGCACGAATGACCATTGGTTTGTGCCTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS TCA 90 bp | TCACTGCACTTCTCTAAAATCGCTTCTTGGATCGCCAGGTGCCAGTaGTCTCCTATTTCCATAACCGGGTCAAACATATTTCGAATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLHFSKIASWIARCQ*SPISITGSNIFRIF Trigger: AAAGATTCGAAATATGTTTGACCCGGTTATGGAAATAGGAGATCACTGGCACCTGGCGATCCAAGAAGCGATTTTAGAGAAGTGCAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATATTTTGGAGCCAGTATGGTaGGCGTGGTTGATCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EKDASASKGDLFKCHNYILEPVW*AWLILS Trigger: ACTCAGGATCAACCACGCCAACCATACTGGCTCCAA...AATATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACAGCACATCAGTTATGTTaGTCAAGTCTTCCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTAHQLC*SSLPQA Trigger: GGCCTGAGGAAGACTTGACAAACATAACTGATGTGC...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | TCGGAACCTGAAGATTTGCAGAACTCTCAAACAGCTGTCTTCAGCAATAAAAATGCACATCAGTTATGTTaGTCAAGTCTTCCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SEPEDLQNSQTAVFSNKNAHQLC*SSLPQA Trigger: GGCCTGAGGAAGACTTGACAAACATAACTGATGTGC...ATTTTTATTGCTGAAGACAGCTGTTTGAGAGTTCTGCAAATCTTCAGGTTCCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACGACAGAAAGCATCCTTaGACTAGAACTGCCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: ANADILTKQDFRYHQHLYDRKHP*TRTATF Trigger: GAATGTGGCAGTTCTAGTCAAAGGATGCTTTCTGTC...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGCCAATTGCTTCTTTATTGCTCACATAAATTTGAACTCATTACAGCTGGTGGTATAACTAATGTCTaGTCACAAGACGCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ICQLLLYCSHKFELITAGGITNV*SQDAEG Trigger: GCCCTCTGCGTCTTGTGACAAGACATTAGTTATACC...ACCAGCTGTAATGAGTTCAAATTTATGTGAGCAATAAAGAAGCAATTGGCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGAAATACAAAACAAGCTGCTTTGCCATGCTTGTCCGTGGTTCTCTAACAATGAAATGCTTGACCTaGCCATACTTTAGAGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LWKYKTSCFAMLVRGSLTMKCLT*PYFRGY Trigger: ATACCCTCTAAAGTATGGCAAGGTCAAGCATTTCAT...TGTTAGAGAACCACGGACAAGCATGGCAAAGCAGCTTGTTTTGTATTTCCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | GCTAATGCAGACATTCTCACAAAACAAGACTTTCGCTATCATCAGCATTTATACAGTTCATATGTTTATTaGCTGGCTTCAAGGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ANADILTKQDFRYHQHLYSSYVY*LASREC Trigger: ACACTCCCTTGAAGCCAGCAAATAAACATATGAACT...GTATAAATGCTGATGATAGCGAAAGTCTTGTTTTGTGAGAATGTCTGCATTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGATGCATCTGCATCAAAAGGTGACCTGTTTAAATGCCACAACTATATTAGTTCATATGTTTATTaGCTGGCTTCAAGGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EKDASASKGDLFKCHNYISSYVY*LASREC Trigger: ACACTCCCTTGAAGCCAGCAAATAAACATATGAACT...AATATAGTTGTGGCATTTAAACAGGTCACCTTTTGATGCAGATGCATCCTTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119944.8 |
||
| CDS-3UTR CAA 90 bp | AGGAACGATGCGGCTTACTGTATACAAAAATTCACATTAGTTCACAAATTATGGATGAAATGCTTGACCTaGCCATACTTTAGAGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RNDAAYCIQKFTLVHKLWMKCLT*PYFRGY Trigger: ATACCCTCTAAAGTATGGCAAGGTCAAGCATTTCAT...CCATAATTTGTGAACTAATGTGAATTTTTGTATACAGTAAGCCGCATCGTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CAA 90 bp | CTGGCCTCCACGTCCGACTCGTCCGAGCTGAAGCCCAGCAGCACTTaGCTGCCCGCCGCGGGGACGGCCGCCGCGCCCCCGGAGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LASTSDSSELKPSST*LPAAGTAAAPPEPP Trigger: AGGAGGCTCCGGGGGCGCGGCGGCCGTCCCCGCGGCGGGCAGCAAAGTGCTGCTGGGCTTCAGCTCGGACGAGTCGGACGTGGAGGCCAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CAA 72 bp | ACGTCCGACTCGTCCGAGCTGAAGCCCAGCAGCACTTaGCTGCCCGCCGCGGGGACGGCCGCCGCGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TSDSSELKPSST*LPAAGTAAAPP Trigger: CGGGGGCGCGGCGGCCGTCCCCGCGGCGGGCAGCAAAGTGCTGCTGGGCTTCAGCTCGGACGAGTCGGACGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS TCA 72 bp | CCCGCGGGCTGGCCTCCACGTCCGACTCGTCCGAGCTaGAGCCCAGCAGCACTTTGCTGCCCGCCGCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PAGWPPRPTRPS*SPAALCCPPRG Trigger: TCCCCGCGGCGGGCAGCAAAGTGCTGCTGGGCTTCAGCTCGGACGAGTCGGACGTGGAGGCCAGCCCGCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | TGTAGGGGAGAAGCCGGCTGCCGTTCACCGTTCGGCTaGCCCACAGCGGCTCCTCGGCCTCGGGGTCGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: CRGEAGCRSPFG*PTAAPRPRGRG Trigger: ACCGCGACCCCGAGGCCGAGGAGCCGCTGTGGGCCAGCCGAACGGTGAACGGCAGCCGGCTTCTCCCCTACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 72 bp | AGTGCTCCCGGCAGCTGCTGTAGGGGAGAAGCCGGCTaGCGTTCACCGTTCGGCTGGCCCACAGCGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAPGSCCRGEAG*RSPFGWPTAAP Trigger: AGGAGCCGCTGTGGGCCAGCCGAACGGTGAACGGCAGCCGGCTTCTCCCCTACAGCAGCTGCCGGGAGCACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 72 bp | CCTCCTCCTCCGAGTCCGAGTAGTGCTCCCGGCAGCTaGTGTAGGGGAGAAGCCGGCTGCCGTTCACCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPPPSPSSAPGS*CRGEAGCRSPF Trigger: GAACGGTGAACGGCAGCCGGCTTCTCCCCTACAGCAGCTGCCGGGAGCACTACTCGGACTCGGAGGAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | CTTCGCGCCGGCACGGTATCGAGGAATGGAGTCCACTaGATCGCACCCGCACCCTCCTCCTCCTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRAGTVSRNGVH*IAPAPSSSSSS Trigger: GGAGGAGGAGGAGGAGGAGGGTGCGGGTGCGATCCAGTGGACTCCATTCCTCGATACCGTGCCGGCGCGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS TCA 72 bp | GCCGCCCTGTCATTCATCGCGAGTGCTCCCCCTCCCTaGACCGAAGTCTCCTGCCGGCTGCCGCCAGATTTA | + |
|
Preference number: 6 (lower is better) Translates to: AALSFIASAPPP*TEVSCRLPPDL Trigger: TAAATCTGGCGGCAGCCGGCAGGAGACTTCGGTTCAGGGAGGGGGAGCACTCGCGATGAATGACAGGGCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | CCAGATTTAGCAGTCAGCGCCGAGAACGGCTTACTATaGCTCCGTCTGGGTCGATGCCGGGCGAGGGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PDLAVSAENGLL*LRLGRCRARES Trigger: CGACTCCCTCGCCCGGCATCGACCCAGACGGAGCCATAGTAAGCCGTTCTCGGCGCTGACTGCTAAATCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | CTCCCCGTCGGGGACACCTCCTCCCGTTTAAACTGCTaGAGAAGTTCCTCTTCGGGCTCGCAGAGCTTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPVGDTSSRLNC*RSSSSGSQSFG Trigger: GCCGAAGCTCTGCGAGCCCGAAGAGGAACTTCTCCAGCAGTTTAAACGGGAGGAGGTGTCCCCGACGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 72 bp | GCCGAGAACGGCTTACTATGGCTCCGTCTGGGTCGATaGCGGGCGAGGGAGTCGTCCTTTAATACCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AENGLLWLRLGR*RARESSFNTCL Trigger: CAGACAGGTATTAAAGGACGACTCCCTCGCCCGGCATCGACCCAGACGGAGCCATAGTAAGCCGTTCTCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | CAGTCAGCGCCGAGAACGGCTTACTATGGCTCCGTCTaGGTCGATGCCGGGCGAGGGAGTCGTCCTTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: QSAPRTAYYGSV*VDAGRGSRPLI Trigger: TATTAAAGGACGACTCCCTCGCCCGGCATCGACCCAGACGGAGCCATAGTAAGCCGTTCTCGGCGCTGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 72 bp | GGAGAAGTTCCTCTTCGGGCTCGCAGAGCTTCGGCTTaGCGTAGGCGGTTTTCAGGTAGGTGTGATTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GEVPLRARRASA*RRRFSGRCDWS Trigger: GCTCCAATCACACCTACCTGAAAACCGCCTACGGCAAGCCGAAGCTCTGCGAGCCCGAAGAGGAACTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 72 bp | AAACTCCCCGTCGGGGACACCTCCTCCCGTTTAAACTaGTGGAGAAGTTCCTCTTCGGGCTCGCAGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KLPVGDTSSRLN*WRSSSSGSQSF Trigger: GAAGCTCTGCGAGCCCGAAGAGGAACTTCTCCAGCAGTTTAAACGGGAGGAGGTGTCCCCGACGGGGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | CACGCCGGAAACGGCACCAGAAGGGCATCTGGGGCCTaGTGGACTGTAAAAACTGCACATCAGTTATGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HAGNGTRRASGA*WTVKTAHQLCL Trigger: CAAACATAACTGATGTGCAGTTTTTACAGTCCACCAGGCCCCAGATGCCCTTCTGGTGCCGTTTCCGGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | ATGAAAGCACGCCGGAAACGGCACCAGAAGGGCATCTaGGGCCTGGTGGACTGTAAAAACTGCACATCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: MKARRKRHQKGI*GLVDCKNCTSV Trigger: AACTGATGTGCAGTTTTTACAGTCCACCAGGCCCCAGATGCCCTTCTGGTGCCGTTTCCGGCGTGCTTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | GCCGGAAACGGCACCAGAAGGGCATCTGGGGCCTGGTaGACTGTAAAAACTGCACATCAGTTATGTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGNGTRRASGAW*TVKTAHQLCLS Trigger: TGACAAACATAACTGATGTGCAGTTTTTACAGTCCACCAGGCCCCAGATGCCCTTCTGGTGCCGTTTCCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CCA 72 bp | GGTATAACTAATGTCTTGTCACAAGACGCAGAGGGCTaGATCCACCGCCAGACTAGAAAGTCTGCACCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GITNVLSQDAEG*IHRQTRKSAPP Trigger: AGGCGGTGCAGACTTTCTAGTCTGGCGGTGGATCCAGCCCTCTGCGTCTTGTGACAAGACATTAGTTATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS TCA 72 bp | ACACAGCCCTCCCGCGAGTTCCTGTCTACGGCAATATaGACGATGCCGTCATTGTCACTGCACTTCTCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: TQPSREFLSTAI*TMPSLSLHFSK Trigger: TTTAGAGAAGTGCAGTGACAATGACGGCATCGTTCATATTGCCGTAGACAGGAACTCGCGGGAGGGCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 72 bp | CAGAAGGGCATCTGGGGCCTGGTGGACTGTAAAAACTaGACATCAGTTATGTTTGTCAAGTCTTCCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QKGIWGLVDCKN*TSVMFVKSSSG Trigger: GCCTGAGGAAGACTTGACAAACATAACTGATGTGCAGTTTTTACAGTCCACCAGGCCCCAGATGCCCTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS GCA 72 bp | CCTCCCGCGAGTTCCTGTCTACGGCAATATGAACGATaGCGTCATTGTCACTGCACTTCTCTAAAATCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPASSCLRQYER*RHCHCTSLKSL Trigger: AAGCGATTTTAGAGAAGTGCAGTGACAATGACGGCATCGTTCATATTGCCGTAGACAGGAACTCGCGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CAA 72 bp | GCCTGGTGGACTGTAAAAACTGCACATCAGTTATGTTaGTCAAGTCTTCCTCAGGCCCGTAACCAACACACC | + |
|
Preference number: 6 (lower is better) Translates to: AWWTVKTAHQLC*SSLPQARNQHT Trigger: GGTGTGTTGGTTACGGGCCTGAGGAAGACTTGACAAACATAACTGATGTGCAGTTTTTACAGTCCACCAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
||
| CDS CAA 72 bp | GAGTTCATATGTTTATTTGCTGGCTTCAAGGGAGTGTaGCAAGTGAGGGCCTGGGGAAAGCGATGGTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: EFICLFAGFKGV*QVRAWGKRWWY Trigger: ATACCACCATCGCTTTCCCCAGGCCCTCACTTGCAACACTCCCTTGAAGCCAGCAAATAAACATATGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS CAA 90 bp | GCATCTGGGGCCTGGTGGACTGTAAAAACTGCACATCAGTTATGTTaGTCAAGTCTTCCTCAGGCCCGTAACCAACACACCTTATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ASGAWWTVKTAHQLC*SSLPQARNQHTLFQ Trigger: TTGGAATAAGGTGTGTTGGTTACGGGCCTGAGGAAGACTTGACAAACATAACTGATGTGCAGTTTTTACAGTCCACCAGGCCCCAGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS TCA 72 bp | TATGTTTATTTGCTGGCTTCAAGGGAGTGTTGCAAGTaGGGGCCTGGGGAAAGCGATGGTGGTATCTATCTA | + |
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Preference number: 6 (lower is better) Translates to: YVYLLASRECCK*GPGESDGGIYL Trigger: TAGATAGATACCACCATCGCTTTCCCCAGGCCCTCACTTGCAACACTCCCTTGAAGCCAGCAAATAAACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS CCA 72 bp | GGAGTGTTGCAAGTGAGGGCCTGGGGAAAGCGATGGTaGTATCTATCTAGTCGTAAGTATTTTACTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: GVLQVRAWGKRW*YLSSRKYFTVT Trigger: GGTTACAGTAAAATACTTACGACTAGATAGATACCACCATCGCTTTCCCCAGGCCCTCACTTGCAACACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS TCA 72 bp | TTCTCTAAAATCGCTTCTTGGATCGCCAGGTGCCAGTaGTCTCCTATTTCCATAACCGGGTCAAACATATTT | + |
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Preference number: 6 (lower is better) Translates to: FSKIASWIARCQ*SPISITGSNIF Trigger: AAATATGTTTGACCCGGTTATGGAAATAGGAGATCACTGGCACCTGGCGATCCAAGAAGCGATTTTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS TCA 72 bp | GGCTGTAAGTCTTTAGTCTCCTGGCAAGCTTCATTATaGCTTCGCAAAACATCTATAATCTTTACCACCATG | + |
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Preference number: 6 (lower is better) Translates to: GCKSLVSWQASL*LRKTSIIFTTM Trigger: CATGGTGGTAAAGATTATAGATGTTTTGCGAAGTCATAATGAAGCTTGCCAGGAGACTAAAGACTTACAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS GCA 72 bp | TTTACTGTAACCAATTTTCCATCAAACCAAGAGCCATaGAATGCTTTAAAAGCCTTCCCAGCATATTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: FTVTNFPSNQEP*NALKAFPAYSG Trigger: TCCGGAATATGCTGGGAAGGCTTTTAAAGCATTGCATGGCTCTTGGTTTGATGGAAAATTGGTTACAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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| CDS CAA 90 bp | CCGGGTCAAACATATTTCGAATCTTTAAACATGGAGTCAAACTATTaGGTGGTGAATTTCTTCTATCTAAATGAAATGCTTGACCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: PGQTYFESLNMESNY*VVNFFYLNEMLDLA Trigger: GGCAAGGTCAAGCATTTCATTTAGATAGAAGAAATTCACCACCAAATAGTTTGACTCCATGTTTAAAGATTCGAAATATGTTTGACCCGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119093.2 ENSMUST00000119944.8 |
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