Pregenerated sensors for LEMD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079330Ensembl transcript IDs: ENSMUST00000112357.9, ENSMUST00000185223.2, ENSMUST00000185436.7, ENSMUST00000187339.7, ENSMUST00000188169.7, ENSMUST00000189062.2, ENSMUST00000191418.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATTCGGTCCTCCATCTCAGTCCTGGCCCACCTGGCCCAAGAGGATaGAAAGAAAGGGCTAAGACCCTGGAGCCCCAGCCTAGACTCCAT | + |
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Preference number: 1 (lower is better) Translates to: DSVLHLSPGPPGPRG*KERAKTLEPQPRLH Trigger: ATGGAGTCTAGGCTGGGGCTCCAGGGTCTTAGCCCTTTCTTTGCATCCTCTTGGGCCAGGTGGGCCAGGACTGAGATGGAGGACCGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR GCA 90 bp | TTCCTTGGCTTACAGACCATCATGCACCACCATGCTGCCTGGTTCTaGCCTTGCTCCTCCACCCGGCTGAACCCAGAAACAGCCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: FLGLQTIMHHHAAWF*PCSSTRLNPETARR Trigger: TCTCCTGGCTGTTTCTGGGTTCAGCCGGGTGGAGGAGCAAGGGCAGAACCAGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
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| 3UTR TCA 90 bp | CCAGACACACAGAAGAGCCTTCTACTGTCTGACCCTTCGAATGTCTaGTTCGGTCCTCCATCTCAGTCCTGGCCCACCTGGCCCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PDTQKSLLLSDPSNV*FGPPSQSWPTWPKR Trigger: CCTCTTGGGCCAGGTGGGCCAGGACTGAGATGGAGGACCGAATCAGACATTCGAAGGGTCAGACAGTAGAAGGCTCTTCTGTGTGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR GCA 90 bp | GGCAGCCTTTCCCATGGTGGCTCCGTGGTGGCTCTGCCCCAACAGTaGCTAAGTGTGATCTCTGTCCGATCCTCATTCTCCATCATTACA | + |
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Preference number: 1 (lower is better) Translates to: GSLSHGGSVVALPQQ*LSVISVRSSFSIIT Trigger: TGTAATGATGGAGAATGAGGATCGGACAGAGATCACACTTAGGCACTGTTGGGGCAGAGCCACCACGGAGCCACCATGGGAAAGGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR CCA 90 bp | GTTCTCGGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGGCATaGAAAGTTGTTCCTGGGGTTCTGGTATGGGGAGCTGCTCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: VLGALPQKAVLRVLA*KVVPGVLVWGAALG Trigger: TCCAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCCGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR CCA 90 bp | ACGTTGTTCTCGGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTaGCATGGAAAGTTGTTCCTGGGGTTCTGGTATGGGGAGCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: TLFSELSHRKLSSGF*HGKLFLGFWYGELL Trigger: GAGCAGCTCCCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCCGAGAACAACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR TCA 90 bp | GCATTTCACTATGTAGCCCAGGCTAGCCTAGAACTCCTGAGCTCCTaGGCTCCTGAGATCTCCTGCTTCAGTTTCCCAAGTACCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: AFHYVAQASLELLSS*APEISCFSFPSTTP Trigger: GGGGGTGGTACTTGGGAAACTGAAGCAGGAGATCTCAGGAGCTCAGGAGCTCAGGAGTTCTAGGCTAGCCTGGGCTACATAGTGAAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR GCA 90 bp | AACCCAGAAACAGCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTaGCTGGTTGTAGCCATGGACCTTCTGCACAGCTCTAAGGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: NPETARRSQYRAGRS*LVVAMDLLHSSKVP Trigger: AGGAACCTTAGAGCTGTGCAGAAGGTCCATGGCTACAACCAGGCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGCTGTTTCTGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
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| 3UTR CCA 90 bp | CCCACAGAAAGCTGTCCTCAGGGTTCTGGCATGGAAAGTTGTTCCTaGGGTTCTGGTATGGGGAGCTGCTCTTGGATCTCTTGTTGCATC | + |
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Preference number: 1 (lower is better) Translates to: PTESCPQGSGMESCS*GSGMGSCSWISCCI Trigger: GATGCAACAAGAGATCCAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR CCA 90 bp | CAACACAATGAAGAAAATCCCAAGGACGGCCAGCTTCAAGCTCCATaGGACGTTGTTCTCGGAGCTCTCCCACAGAAAGCTGTCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: QHNEENPKDGQLQAP*DVVLGALPQKAVLR Trigger: CCTGAGGACAGCTTTCTGTGGGAGAGCTCCGAGAACAACGTCCCATGGAGCTTGAAGCTGGCCGTCCTTGGGATTTTCTTCATTGTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR TCA 90 bp | CCAACAAGCAGCACTCCTCCATGGTCTCTGCTTCAGTTCCTGCCCTaGCTTCCCTCAGTAATGGATCGTGATGGGAAATGGTGTGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: PTSSTPPWSLLQFLP*LPSVMDRDGKWCAK Trigger: TTTGGCACACCATTTCCCATCACGATCCATTACTGAGGGAAGTCAGGGCAGGAACTGAAGCAGAGACCATGGAGGAGTGCTGCTTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR TCA 90 bp | TTGTTGGTCAGGTACCAGTTAAATAAAGATGGAAGACACACGCTCTaGGCACCACAGCAGCCTCAGGCTCAGATCCACGGGGAGCTGACA | + |
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Preference number: 1 (lower is better) Translates to: LLVRYQLNKDGRHTL*APQQPQAQIHGELT Trigger: TGTCAGCTCCCCGTGGATCTGAGCCTGAGGCTGCTGTGGTGCTCAGAGCGTGTGTCTTCCATCTTTATTTAACTGGTACCTGACCAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR TCA 90 bp | GAAGAGACTCTCTGGAGGAGCTGCCTGTACACTCTTTGGGAACTCTaGAAGCCAGTTTTCACCACAACTTCTTACCCGTGCTGGGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: EETLWRSCLYTLWEL*KPVFTTTSYPCWGK Trigger: CTTTCCCCAGCACGGGTAAGAAGTTGTGGTGAAAACTGGCTTTCAGAGTTCCCAAAGAGTGTACAGGCAGCTCCTCCAGAGAGTCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR TCA 90 bp | AGAATAGCAGAGAAGCTAGCAGCTCAGGCTCCACCAAGACAACCTTaGTCCCAGCAAATCTGCAGAAAGCCCAAGAAACACCCTTTCCCG | + |
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Preference number: 1 (lower is better) Translates to: RIAEKLAAQAPPRQP*SQQICRKPKKHPFP Trigger: CGGGAAAGGGTGTTTCTTGGGCTTTCTGCAGATTTGCTGGGATCAAGGTTGTCTTGGTGGAGCCTGAGCTGCTAGCTTCTCTGCTATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR TCA 90 bp | CAGAGGGTAGGAGGCTCAGGCAGTTTCCCTTACAGAAGAGCGTGCTaGTGTATTAGCATCTTTAATGATGGCTTCCTTGGCTTACAGACC | + |
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Preference number: 1 (lower is better) Translates to: QRVGGSGSFPYRRAC*CISIFNDGFLGLQT Trigger: GGTCTGTAAGCCAAGGAAGCCATCATTAAAGATGCTAATACATCAGCACGCTCTTCTGTAAGGGAAACTGCCTGAGCCTCCTACCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112357.9 ENSMUST00000188169.7 |
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| 3UTR GCA 90 bp | AACCCTCCAAAGTCTGCAAAAACAGTTACTTTGCTGTTTAGCAACTaGTTTCCTCTCCCAAGGCTGCATAAGCTTCATGGGAGGGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: NPPKSAKTVTLLFSN*FPLPRLHKLHGRGP Trigger: GGGACCCCTCCCATGAAGCTTATGCAGCCTTGGGAGAGGAAAGCAGTTGCTAAACAGCAAAGTAACTGTTTTTGCAGACTTTGGAGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR TCA 90 bp | GAGCCAGAGATAAAGTTAGGTTCAATGACTGCAGAAGGGCCCATCTaGGTCTGCTTCGGAGGCAGATTTACGCTGTATCAAAGTCACTGT | + |
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Preference number: 1 (lower is better) Translates to: EPEIKLGSMTAEGPI*VCFGGRFTLYQSHC Trigger: ACAGTGACTTTGATACAGCGTAAATCTGCCTCCGAAGCAGACTCAGATGGGCCCTTCTGCAGTCATTGAACCTAACTTTATCTCTGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR GCA 90 bp | TGTCGCATACATCAAACCCTCCAAAGTCTGCAAAAACAGTTACTTTaGTGTTTAGCAACTGCTTTCCTCTCCCAAGGCTGCATAAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: CRIHQTLQSLQKQLL*CLATAFLSQGCISF Trigger: GAAGCTTATGCAGCCTTGGGAGAGGAAAGCAGTTGCTAAACAGCAAAGTAACTGTTTTTGCAGACTTTGGAGGGTTTGATGTATGCGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR TCA 90 bp | TTCAATAATTCACAGGAATCATACAAGGCTCGTGAGGTCCCTCTCTaGGCTCATAGAACTGTAAACAACTTCCAGAGAGAAGAGACTCTC | + |
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Preference number: 1 (lower is better) Translates to: FNNSQESYKAREVPL*AHRTVNNFQREETL Trigger: GAGAGTCTCTTCTCTCTGGAAGTTGTTTACAGTTCTATGAGCTCAGAGAGGGACCTCACGAGCCTTGTATGATTCCTGTGAATTATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR GCA 90 bp | AGTATTGTACCTTTGTATAGGGCTTGTTTTATCTGCCATAGAAATTaGTATAGGACCTCTTCCTCTTCTGAGCCTGACTGGAATCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: SIVPLYRACFICHRN*YRTSSSSEPDWNPD Trigger: GTCTGGATTCCAGTCAGGCTCAGAAGAGGAAGAGGTCCTATAGCAATTTCTATGGCAGATAAAACAAGCCCTATACAAAGGTACAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR CAA 90 bp | GGACCTCTTCCTCTTCTGAGCCTGACTGGAATCCAGACCTCACACTaGCTTGGTAGGGCTCAACCTCTGACCCCCAGCCCCAGCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GPLPLLSLTGIQTSH*LGRAQPLTPSPSQP Trigger: AGGCTGGCTGGGGCTGGGGGTCAGAGGTTGAGCCCTACCAAGCAAGTGTGAGGTCTGGATTCCAGTCAGGCTCAGAAGAGGAAGAGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR-3UTR GCA 90 bp | TTGGCTTACAGACCATCATGCACCACCATGCTGCCTGGTTCTGCCCTTGCTCCTGCCTGGTTCTGCCCTTaGTCCTCCACCCGGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LAYRPSCTTMLPGSALAPAWFCP*SSTRLN Trigger: GTTCAGCCGGGTGGAGGAGCAAGGGCAGAACCAGGC...AGGAGCAAGGGCAGAACCAGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
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| 3UTR-3UTR GCA 90 bp | TCCATGGGACGTTGTTCTCGGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTAGGGCGGGGAGAAGTTaGCTGGTTGTAGCCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: SMGRCSRSSPTESCPQGSRAGRS*LVVAMD Trigger: GTCCATGGCTACAACCAGGCAACTTCTCCCCGCCCT...AGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCCGAGAACAACGTCCCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185436.7 ENSMUST00000188169.7 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGGGTAGGAGGCTCAGGCAGTTTCCCTTACAGAAGAGCGTGCTGATGTATCACCACCATGCTGCCTaGTTCTGCCCTTGCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AEGRRLRQFPLQKSVLMYHHHAA*FCPCSS Trigger: GGAGGAGCAAGGGCAGAACCAGGCAGCATGGTGGTG...ATACATCAGCACGCTCTTCTGTAAGGGAAACTGCCTGAGCCTCCTACCCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112357.9 ENSMUST00000188169.7 |
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| 3UTR-3UTR CCA 90 bp | CGGCTGAACCCAGAAACAGCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTGCTTGTTCCTGGGGTTCTaGTATGGGGAGCTGCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RLNPETARRSQYRAGRSCLFLGF*YGELLL Trigger: CAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAA...GCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGCTGTTTCTGGGTTCAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000185436.7 ENSMUST00000188169.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTACTGTCTGACCCTTCGAATGTCTGATTCGGTCCTCCATCTCAGTCCTGGCGGAAGACACACGCTCTaGGCACCACAGCAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: FYCLTLRMSDSVLHLSPGGRHTL*APQQPQ Trigger: CTGAGGCTGCTGTGGTGCTCAGAGCGTGTGTCTTCC...GCCAGGACTGAGATGGAGGACCGAATCAGACATTCGAAGGGTCAGACAGTAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGTGGGAAGGCAGAGGCGAAAAGCCAGTGGAGAATAGCAGAGAAGCTAGCCAGTCCTGGCCCACCTaGCCCAAGAGGATGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: FRWEGRGEKPVENSREASQSWPT*PKRMQR Trigger: TCTTTGCATCCTCTTGGGCCAGGTGGGCCAGGACTG...GCTAGCTTCTCTGCTATTCTCCACTGGCTTTTCGCCTCTGCCTTCCCACCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR CAA 90 bp | GAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGGCATGGAAAGTaGTTCCTGGGGTTCTGGTATGGGGAGCTGCTCTTGGATCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: ELSHRKLSSGFWHGK*FLGFWYGELLLDLL Trigger: CAAGAGATCCAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR CAA 90 bp | ATGAAGAAAATCCCAAGGACGGCCAGCTTCAAGCTCCATGGGACGTaGTTCTCGGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: MKKIPRTASFKLHGT*FSELSHRKLSSGFW Trigger: CCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCCGAGAACAACGTCCCATGGAGCTTGAAGCTGGCCGTCCTTGGGATTTTCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR-3UTR CCA 90 bp | ACGTTGTTCTCGGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGGCATGGAATGGAAAGTTGTTCCTaGGGTTCTGGTATGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: TLFSELSHRKLSSGFWHGMESCS*GSGMGS Trigger: GCTCCCCATACCAGAACCCCAGGAACAACTTTCCAT...TCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCCGAGAACAACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR-3UTR TCA 90 bp | TTCCCGTTTGCTCAGAGTCTCTCGCTGAGTCCAGACCTTCCTCCATCTTTGACCGAGACACAAGCACAATaGCAAAGCCAGGGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: FPFAQSLSLSPDLPPSLTETQAQ*QSQGRK Trigger: CTTCCTTCCCTGGCTTTGTCATTGTGCTTGTGTCTC...GGTCAAAGATGGAGGAAGGTCTGGACTCAGCGAGAGACTCTGAGCAAACGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTGCCTGGTTGTAGCCATGGACGAAGCCTCAAGTCTCTaGCATAAGCAGAAAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: ARRSQYRAGRSCLVVAMDEASSL*HKQKEM Trigger: CATTTCTTTCTGCTTATGTCAGAGACTTGAGGCTTC...GTCCATGGCTACAACCAGGCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185436.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGGTCAGGGCCAGACACACAGAAGAGCCTTCTACTGTCTGACCCTTCGATTGCTGTTTAGCAACTaGTTTCCTCTCCCAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LVGQGQTHRRAFYCLTLRLLFSN*FPLPRL Trigger: CAGCCTTGGGAGAGGAAAGCAGTTGCTAAACAGCAA...TCGAAGGGTCAGACAGTAGAAGGCTCTTCTGTGTGTCTGGCCCTGACCTACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGGGTAGGAGGCTCAGGCAGTTTCCCTTACAGAAGAGCGTGCTGATGTATATGGAAAGTTGTTCCTaGGGTTCTGGTATGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: AEGRRLRQFPLQKSVLMYMESCS*GSGMGS Trigger: GCTCCCCATACCAGAACCCCAGGAACAACTTTCCAT...ATACATCAGCACGCTCTTCTGTAAGGGAAACTGCCTGAGCCTCCTACCCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR CAA 90 bp | GCAAAGAAAGGGCTAAGACCCTGGAGCCCCAGCCTAGACTCCATCTaGTGTTTGATGGTGGTGTCGCATACATCAAACCCTCCAAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: AKKGLRPWSPSLDSI*CLMVVSHTSNPPKS Trigger: AGACTTTGGAGGGTTTGATGTATGCGACACCACCATCAAACACAAGATGGAGTCTAGGCTGGGGCTCCAGGGTCTTAGCCCTTTCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGTCCTCAGGGTTCTGGCATGGAAAGTTGTTCCTGGGGTTCTGGTATGGGGTCTTGCAGCATACCTaGCTTTCTTTGTGGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KLSSGFWHGKLFLGFWYGVLQHT*LSLWAS Trigger: AGAAGCCCACAAAGAAAGTCAGGTATGCTGCAAGAC...CCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 |
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| 3UTR-3UTR GCA 90 bp | CGTGCTGATGTATTAGCATCTTTAATGATGGCTTCCTTGGCTTACAGACCATCAGCCTGGTTCTGCCCTTaGTCCTCCACCCGGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: RADVLASLMMASLAYRPSAWFCP*SSTRLN Trigger: GTTCAGCCGGGTGGAGGAGCAAGGGCAGAACCAGGC...TGATGGTCTGTAAGCCAAGGAAGCCATCATTAAAGATGCTAATACATCAGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112357.9 ENSMUST00000188169.7 |
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| 3UTR-3UTR CCA 90 bp | GATCCCAGCAAATCTGCAGAAAGCCCAAGAAACACCCTTTCCCGTTTGCTCAGAGCAAGTGGCAGATCCTaGGGAAACCCTTGTGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: DPSKSAESPRNTLSRLLRASGRS*GNPCVA Trigger: AGCTACACAAGGGTTTCCCCAGGATCTGCCACTTGC...TCTGAGCAAACGGGAAAGGGTGTTTCTTGGGCTTTCTGCAGATTTGCTGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR CAA 90 bp | CTTCCAGAGAGAAGAGACTCTCTGGAGGAGCTGCCTGTACACTCTTaGGGAACTCTGAAAGCCAGTTTTCACCACAACTTCTTACCCGTG | + |
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Preference number: 2 (lower is better) Translates to: LPERRDSLEELPVHS*GTLKASFHHNFLPV Trigger: CACGGGTAAGAAGTTGTGGTGAAAACTGGCTTTCAGAGTTCCCAAAGAGTGTACAGGCAGCTCCTCCAGAGAGTCTCTTCTCTCTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR CAA 90 bp | AAAGGGCTAAGACCCTGGAGCCCCAGCCTAGACTCCATCTTGTGTTaGATGGTGGTGTCGCATACATCAAACCCTCCAAAGTCTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: KGLRPWSPSLDSILC*MVVSHTSNPPKSAK Trigger: TTTTGCAGACTTTGGAGGGTTTGATGTATGCGACACCACCATCAAACACAAGATGGAGTCTAGGCTGGGGCTCCAGGGTCTTAGCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGGCATGGAAAGTTGTTCCTGGGTCTTGGATCTCTTGTTaGATCGAGAGTAGTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: ALPQKAVLRVLAWKVVPGSWISC*IESSLL Trigger: AAGAAGACTACTCTCGATGCAACAAGAGATCCAAGA...CCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTAATGATGGCTTCCTTGGCTTACAGACCATCATGCACCACCATGCTGCCGTCTTGCAGCATACCTaGCTTTCTTTGTGGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IFNDGFLGLQTIMHHHAAVLQHT*LSLWAS Trigger: AGAAGCCCACAAAGAAAGTCAGGTATGCTGCAAGAC...GGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAGCCATCATTAAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185436.7 |
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| 3UTR-3UTR TCA 90 bp | TTAAATAAAGCAGACTGGGCAAGCCATGGCAAGCAAGCCAACAAGCAGCACTCCAGATTGAAACATTCCTaGGATGGGAGGAAGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: LNKADWASHGKQANKQHSRLKHS*DGRKAH Trigger: ATGAGCCTTCCTCCCATCTCAGGAATGTTTCAATCT...GGAGTGCTGCTTGTTGGCTTGCTTGCCATGGCTTGCCCAGTCTGCTTTATTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR-3UTR TCA 90 bp | CCACCTCTTCCTCTAGCACCTAAGAGACACAAGCACAATGACAAAGCCAGGGAAAAACGCTTTTGCTTCTaGACTCCTAGAAATGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: PPLPLAPKRHKHNDKAREKRFCF*TPRNGH Trigger: GTGGCCATTTCTAGGAGTTCAGAAGCAAAAGCGTTT...TTCCCTGGCTTTGTCATTGTGCTTGTGTCTCTTAGGTGCTAGAGGAAGAGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAATAAAGCAGACTGGGCAAGCCATGGCAAGCAAGCCAACAAGCAGCACTCCTCACTGTCATCAGCATaGCAAACTGCAAATGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: LNKADWASHGKQANKQHSSLSSA*QTANVT Trigger: GGTGACATTTGCAGTTTGGCATGCTGATGACAGTGA...GGAGTGCTGCTTGTTGGCTTGCTTGCCATGGCTTGCCCAGTCTGCTTTATTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR-3UTR CCA 90 bp | CGTGCTGATGTATTAGCATCTTTAATGATGGCTTCCTTGGCTTACAGACCATCATTGTTCCTGGGGTTCTaGTATGGGGAGCTGCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: RADVLASLMMASLAYRPSLFLGF*YGELLL Trigger: CAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAA...TGATGGTCTGTAAGCCAAGGAAGCCATCATTAAAGATGCTAATACATCAGCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR-3UTR GCA 90 bp | TGCAAAGAAAGGGCTAAGACCCTGGAGCCCCAGCCTAGACTCCATCTTGTGTTTAAACCCTCCAAAGTCTaGAAAAACAGTTACTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CKERAKTLEPQPRLHLVFKPSKV*KNSYFA Trigger: AGCAAAGTAACTGTTTTTGCAGACTTTGGAGGGTTT...AAACACAAGATGGAGTCTAGGCTGGGGCTCCAGGGTCTTAGCCCTTTCTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTAATGATGGCTTCCTTGGCTTACAGACCATCATGCACCACCATGCTGCCTTCTTGGATCTCTTGTTaGATCGAGAGTAGTCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLMMASLAYRPSCTTMLPSWISC*IESSLL Trigger: AAGAAGACTACTCTCGATGCAACAAGAGATCCAAGA...AGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAGCCATCATTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR-3UTR CCA 90 bp | TACCACCCCCTACACACACACACACACACACACACACACACACACACACACATATGTTCTTGTAAATTTTaGGGGTCAAATGATTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YHPLHTHTHTHTHTHTHICSCKF*GSNDSW Trigger: CCAGGAATCATTTGACCCCCAAAATTTACAAGAACA...TATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGGGTGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTTTCCTCCCTGAGATGATTTTGTTTAGTGTTTCATCACAGCAAGTAGAACCAGGAGACACATGGTaGCTCACAATCATCTATGAC | + |
|
Preference number: 2 (lower is better) Translates to: NPFLPEMILFSVSSQQVEPGDTW*LTIIYD Trigger: GTCATAGATGATTGTGAGCCACCATGTGTCTCCTGG...TTCTACTTGCTGTGATGAAACACTAAACAAAATCATCTCAGGGAGGAAAGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR-3UTR GCA 90 bp | AACCCTTTCCTCCCTGAGATGATTTTGTTTAGTGTTTCATCACAGCAAGTAGAACTCACCTCTGTCCTTTaGGGTGTTCTTGTAAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: NPFLPEMILFSVSSQQVELTSVL*GVLVNF Trigger: AAAATTTACAAGAACACCGCAAAGGACAGAGGTGAG...TTCTACTTGCTGTGATGAAACACTAAACAAAATCATCTCAGGGAGGAAAGGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR TCA 72 bp | GACCCCCAGCCCCAGCCAGCCTCTACTGTTAATGGCTaGGGCAGCCTTTCCCATGGTGGCTCCGTGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPQPQPASTVNG*GSLSHGGSVVA Trigger: AGCCACCACGGAGCCACCATGGGAAAGGCTGCCTCAGCCATTAACAGTAGAGGCTGGCTGGGGCTGGGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR GCA 72 bp | TGGCTTCCTTGGCTTACAGACCATCATGCACCACCATaGTGCCTGGTTCTGCCCTTGCTCCTCCACCCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: WLPWLTDHHAPP*CLVLPLLLHPA Trigger: AGCCGGGTGGAGGAGCAAGGGCAGAACCAGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR GCA 72 bp | CTTCCTTGGCTTACAGACCATCATGCACCACCATGCTaGCTGGTTCTGCCCTTGCTCCTCCACCCGGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPWLTDHHAPPC*LVLPLLLHPAE Trigger: TTCAGCCGGGTGGAGGAGCAAGGGCAGAACCAGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR GCA 72 bp | TCCCATGGTGGCTCCGTGGTGGCTCTGCCCCAACAGTaGCTAAGTGTGATCTCTGTCCGATCCTCATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SHGGSVVALPQQ*LSVISVRSSFS Trigger: GGAGAATGAGGATCGGACAGAGATCACACTTAGGCACTGTTGGGGCAGAGCCACCACGGAGCCACCATGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR GCA 72 bp | ACAGCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTaGCTGGTTGTAGCCATGGACCTTCTGCACAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TARRSQYRAGRS*LVVAMDLLHSS Trigger: AGAGCTGTGCAGAAGGTCCATGGCTACAACCAGGCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR GCA 72 bp | TTACAGACCATCATGCACCACCATGCTGCCTGGTTCTaGCCTTGCTCCTCCACCCGGCTGAACCCAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: LQTIMHHHAAWF*PCSSTRLNPET Trigger: TGTTTCTGGGTTCAGCCGGGTGGAGGAGCAAGGGCAGAACCAGGCAGCATGGTGGTGCATGATGGTCTGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR TCA 72 bp | CAGAAGAGCCTTCTACTGTCTGACCCTTCGAATGTCTaGTTCGGTCCTCCATCTCAGTCCTGGCCCACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QKSLLLSDPSNV*FGPPSQSWPTW Trigger: CCAGGTGGGCCAGGACTGAGATGGAGGACCGAATCAGACATTCGAAGGGTCAGACAGTAGAAGGCTCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| 3UTR TCA 72 bp | CAGCTTCCCAAGGACAGAAGGGAACGAGGCAGGGTGTaGGTAAACAAAATGGGATCAGTGGTGTGGCCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLPKDRRERGRV*VNKMGSVVWPS Trigger: GCTCGGCCACACCACTGATCCCATTTTGTTTACTCACACCCTGCCTCGTTCCCTTCTGTCCTTGGGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| 3UTR CCA 72 bp | GCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGGCATaGAAAGTTGTTCCTGGGGTTCTGGTATGGGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALPQKAVLRVLA*KVVPGVLVWGA Trigger: AGCTCCCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
||
| 3UTR CCA 72 bp | TCGGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTaGCATGGAAAGTTGTTCCTGGGGTTCTGGTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SELSHRKLSSGF*HGKLFLGFWYG Trigger: CCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTGCCTGGTTGTAGCCATGGACTTCTGGCATGGAAAGTaGTTCCTGGGGTTCTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ARRSQYRAGRSCLVVAMDFWHGK*FLGFWY Trigger: ATACCAGAACCCCAGGAACAACTTTCCATGCCAGAA...GTCCATGGCTACAACCAGGCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR CCA 72 bp | AGCTGTCCTCAGGGTTCTGGCATGGAAAGTTGTTCCTaGGGTTCTGGTATGGGGAGCTGCTCTTGGATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SCPQGSGMESCS*GSGMGSCSWIS Trigger: AGAGATCCAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
||
| 3UTR CCA 72 bp | CTGGCCCAAGAGGATGCAAAGAAAGGGCTAAGACCCTaGAGCCCCAGCCTAGACTCCATCTTGTGTTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LAQEDAKKGLRP*SPSLDSILCLM Trigger: CATCAAACACAAGATGGAGTCTAGGCTGGGGCTCCAGGGTCTTAGCCCTTTCTTTGCATCCTCTTGGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| 3UTR TCA 72 bp | AGGTACCAGTTAAATAAAGATGGAAGACACACGCTCTaGGCACCACAGCAGCCTCAGGCTCAGATCCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: RYQLNKDGRHTL*APQQPQAQIHG Trigger: CCCGTGGATCTGAGCCTGAGGCTGCTGTGGTGCTCAGAGCGTGTGTCTTCCATCTTTATTTAACTGGTACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| 3UTR TCA 72 bp | GTCAGGGCCAGACACACAGAAGAGCCTTCTACTGTCTaGCCCTTCGAATGTCTGATTCGGTCCTCCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VRARHTEEPSTV*PFECLIRSSIS Trigger: TGAGATGGAGGACCGAATCAGACATTCGAAGGGTCAGACAGTAGAAGGCTCTTCTGTGTGTCTGGCCCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGGCATGGAAAGTTGTTCCTTTCTGGCATGGAAAGTaGTTCCTGGGGTTCTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: GALPQKAVLRVLAWKVVPFWHGK*FLGFWY Trigger: ATACCAGAACCCCAGGAACAACTTTCCATGCCAGAA...AGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
||
| 3UTR TCA 72 bp | GAGAAGCTAGCAGCTCAGGCTCCACCAAGACAACCTTaGTCCCAGCAAATCTGCAGAAAGCCCAAGAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: EKLAAQAPPRQP*SQQICRKPKKH Trigger: GTGTTTCTTGGGCTTTCTGCAGATTTGCTGGGATCAAGGTTGTCTTGGTGGAGCCTGAGCTGCTAGCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| 3UTR GCA 72 bp | TCTTTAATGATGGCTTCCTTGGCTTACAGACCATCATaGACCACCATGCTGCCTGGTTCTGCCCTTGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLMMASLAYRPS*TTMLPGSALAP Trigger: AGGAGCAAGGGCAGAACCAGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAGCCATCATTAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR CCA 72 bp | TCAGGGTTCTGGCATGGAAAGTTGTTCCTGGGGTTCTaGTATGGGGAGCTGCTCTTGGATCTCTTGTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SGFWHGKLFLGF*YGELLLDLLLH Trigger: ATGCAACAAGAGATCCAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
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| 3UTR-3UTR CAA 90 bp | AATGATGGCTTCCTTGGCTTACAGACCATCATGCACCACCATGCTGCCTGGTTCTTCTGGCATGGAAAGTaGTTCCTGGGGTTCTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: NDGFLGLQTIMHHHAAWFFWHGK*FLGFWY Trigger: ATACCAGAACCCCAGGAACAACTTTCCATGCCAGAA...GAACCAGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAGCCATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR TCA 72 bp | TCAGTTCCTGCCCTGACTTCCCTCAGTAATGGATCGTaGTGGGAAATGGTGTGCCAAATTAACCCTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SVPALTSLSNGS*WEMVCQINPFL Trigger: GAGGAAAGGGTTAATTTGGCACACCATTTCCCATCACGATCCATTACTGAGGGAAGTCAGGGCAGGAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR TCA 72 bp | ATAAAGTTAGGTTCAATGACTGCAGAAGGGCCCATCTaGGTCTGCTTCGGAGGCAGATTTACGCTGTATCAA | + |
|
Preference number: 3 (lower is better) Translates to: IKLGSMTAEGPI*VCFGGRFTLYQ Trigger: TTGATACAGCGTAAATCTGCCTCCGAAGCAGACTCAGATGGGCCCTTCTGCAGTCATTGAACCTAACTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR TCA 72 bp | TCACAGGAATCATACAAGGCTCGTGAGGTCCCTCTCTaGGCTCATAGAACTGTAAACAACTTCCAGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SQESYKAREVPL*AHRTVNNFQRE Trigger: TTCTCTCTGGAAGTTGTTTACAGTTCTATGAGCTCAGAGAGGGACCTCACGAGCCTTGTATGATTCCTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR GCA 72 bp | ACATTTGTGTACATGTTCTCAGGAAGAGTCACCAGCTaGCACCAGGAAACAGAAAGATCAGAGCCAGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: TFVYMFSGRVTS*HQETERSEPEI Trigger: TATCTCTGGCTCTGATCTTTCTGTTTCCTGGTGGCAGCTGGTGACTCTTCCTGAGAACATGTACACAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR TCA 72 bp | GGTATAGCTACCTCTGTCTCCAGATTGAAACATTCCTaGGATGGGAGGAAGGCTCATAAAACCCATAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GIATSVSRLKHS*DGRKAHKTHKT Trigger: TGTCTTATGGGTTTTATGAGCCTTCCTCCCATCTCAGGAATGTTTCAATCTGGAGACAGAGGTAGCTATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR GCA 72 bp | CCTTTGTATAGGGCTTGTTTTATCTGCCATAGAAATTaGTATAGGACCTCTTCCTCTTCTGAGCCTGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PLYRACFICHRN*YRTSSSSEPDW Trigger: CCAGTCAGGCTCAGAAGAGGAAGAGGTCCTATAGCAATTTCTATGGCAGATAAAACAAGCCCTATACAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR GCA 72 bp | AAGTCTGCAAAAACAGTTACTTTGCTGTTTAGCAACTaGTTTCCTCTCCCAAGGCTGCATAAGCTTCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: KSAKTVTLLFSN*FPLPRLHKLHG Trigger: CCCATGAAGCTTATGCAGCCTTGGGAGAGGAAAGCAGTTGCTAAACAGCAAAGTAACTGTTTTTGCAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| 3UTR GCA 72 bp | CCCAGTATTGTACCTTTGTATAGGGCTTGTTTTATCTaGCATAGAAATTGCTATAGGACCTCTTCCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSIVPLYRACFI*HRNCYRTSSSS Trigger: AGAAGAGGAAGAGGTCCTATAGCAATTTCTATGGCAGATAAAACAAGCCCTATACAAAGGTACAATACTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| CDS-3UTR TCA 90 bp | ACCACAGCAGCCTCAGGCTCAGATCCACGGGGAGCTGACAAGGGAGGCCCTGGTATCTTGCAGAAGCCGTaGAGACCACAGAAACAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TTAASGSDPRGADKGGPGILQKP*RPQKQA Trigger: CGCCTGTTTCTGTGGTCTTCACGGCTTCTGCAAGAT...ACCAGGGCCTCCCTTGTCAGCTCCCCGTGGATCTGAGCCTGAGGCTGCTGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185223.2 ENSMUST00000189062.2 |
||
| 3UTR CAA 72 bp | CCTCTTCTGAGCCTGACTGGAATCCAGACCTCACACTaGCTTGGTAGGGCTCAACCTCTGACCCCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLTGIQTSH*LGRAQPLTPSP Trigger: GGGGCTGGGGGTCAGAGGTTGAGCCCTACCAAGCAAGTGTGAGGTCTGGATTCCAGTCAGGCTCAGAAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCAGCCTCAGGCTCAGATCCACGGGGAGCTGACAAGGGAGGCCCTGGTTCTTCCTCTTCATCTTaGAGAAGCCGTGAAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTAASGSDPRGADKGGPGSSSSS*RSREDH Trigger: GTGGTCTTCACGGCTTCTGCAAGATGAAGAGGAAGA...ACCAGGGCCTCCCTTGTCAGCTCCCCGTGGATCTGAGCCTGAGGCTGCTGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185223.2 ENSMUST00000189062.2 |
||
| 3UTR CAA 72 bp | TTTGACCCTGACGGTGGTGGGAATGTGACATCTCCCTaGTGTGCAGAACTGCTTGTCCCAGTGAGGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FDPDGGGNVTSP*CAELLVPVRRA Trigger: CGCCCTCCTCACTGGGACAAGCAGTTCTGCACACAAGGGAGATGTCACATTCCCACCACCGTCAGGGTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTGCCTGGTTGTAGCCATGGACCGTAGGTCTTTCTGGTaGAAGGTAGTATTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARRSQYRAGRSCLVVAMDRRSFW*KVVLGQ Trigger: CTGGCCCAATACTACCTTCCACCAGAAAGACCTACG...GTCCATGGCTACAACCAGGCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| CDS-3UTR CCA 90 bp | CTGAACCCAGAAACAGCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTGCCTGTTGTTCCTGGGGTTCTaGTATGGGGAGCTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNPETARRSQYRAGRSCLLFLGF*YGELLL Trigger: CAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAA...CAGGCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGCTGTTTCTGGGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112357.9 |
||
| CDS-3UTR CCA 90 bp | CATGGGACGTTGTTCTCGGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGGCGTAGGTCTTTCTGGTaGAAGGTAGTATTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGTLFSELSHRKLSSGFWRRSFW*KVVLGQ Trigger: CTGGCCCAATACTACCTTCCACCAGAAAGACCTACG...CCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCCGAGAACAACGTCCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
||
| CDS-3UTR CCA 90 bp | ACAGCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTGCCTGGTTGTAGCCATGATGGAAAGTTGTTCCTaGGGTTCTGGTATGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TARRSQYRAGRSCLVVAMMESCS*GSGMGS Trigger: GCTCCCCATACCAGAACCCCAGGAACAACTTTCCAT...CATGGCTACAACCAGGCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112357.9 |
||
| 3UTR CAA 72 bp | CACAGAAAGCTGTCCTCAGGGTTCTGGCATGGAAAGTaGTTCCTGGGGTTCTGGTATGGGGAGCTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRKLSSGFWHGK*FLGFWYGELLL Trigger: CAAGAGCAGCTCCCCATACCAGAACCCCAGGAACAACTTTCCATGCCAGAACCCTGAGGACAGCTTTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 |
||
| 3UTR CAA 72 bp | AAGGTCTGTCCCCTGTGTCCTGTCTGGGGGAGACATTaGTGTACATGTTCTCAGGAAGAGTCACCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVCPLCPVWGRH*CTCSQEESPAA Trigger: GGCAGCTGGTGACTCTTCCTGAGAACATGTACACAAATGTCTCCCCCAGACAGGACACAGGGGACAGACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
||
| 3UTR CAA 72 bp | GGGCTAAGACCCTGGAGCCCCAGCCTAGACTCCATCTaGTGTTTGATGGTGGTGTCGCATACATCAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRPWSPSLDSI*CLMVVSHTSNP Trigger: AGGGTTTGATGTATGCGACACCACCATCAAACACAAGATGGAGTCTAGGCTGGGGCTCCAGGGTCTTAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAACAGCCAGGAGAAGCCAGTATAGGGCGGGGAGAAGTTGCCTGGTTGTACGTAGGTCTTTCTGGTaGAAGGTAGTATTGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PETARRSQYRAGRSCLVVRRSFW*KVVLGQ Trigger: CTGGCCCAATACTACCTTCCACCAGAAAGACCTACG...TACAACCAGGCAACTTCTCCCCGCCCTATACTGGCTTCTCCTGGCTGTTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000188169.7 |
||
| 3UTR CAA 72 bp | AGACCCTGGAGCCCCAGCCTAGACTCCATCTTGTGTTaGATGGTGGTGTCGCATACATCAAACCCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPWSPSLDSILC*MVVSHTSNPPK Trigger: CTTTGGAGGGTTTGATGTATGCGACACCACCATCAAACACAAGATGGAGTCTAGGCTGGGGCTCCAGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
||
| CDS-3UTR GCA 90 bp | AACTGCTTTCCTCTCCCAAGGCTGCATAAGCTTCATGGGAGGGGTCCCCTGAGATCTTCCTCTTCATCTTaGAGAAGCCGTGAAGACCAC | + |
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Preference number: 4 (lower is better) Translates to: NCFPLPRLHKLHGRGPLRSSSSS*RSREDH Trigger: GTGGTCTTCACGGCTTCTGCAAGATGAAGAGGAAGA...TCTCAGGGGACCCCTCCCATGAAGCTTATGCAGCCTTGGGAGAGGAAAGCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| CDS-3UTR TCA 90 bp | CCACCTCTTCCTCTAGCACCTAAGAGACACAAGCACAATGACAAAGCCAGGGAAATCTTGCAGAAGCCGTaGAGACCACAGAAACAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PPLPLAPKRHKHNDKAREILQKP*RPQKQA Trigger: CGCCTGTTTCTGTGGTCTTCACGGCTTCTGCAAGAT...TTCCCTGGCTTTGTCATTGTGCTTGTGTCTCTTAGGTGCTAGAGGAAGAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| CDS-3UTR CCA 90 bp | GTTAGGTTCAATGACTGCAGAAGGGCCCATCTGAGTCTGCTTCGGAGGCAGATTCGTAGGTCTTTCTGGTaGAAGGTAGTATTGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VRFNDCRRAHLSLLRRQIRRSFW*KVVLGQ Trigger: CTGGCCCAATACTACCTTCCACCAGAAAGACCTACG...AATCTGCCTCCGAAGCAGACTCAGATGGGCCCTTCTGCAGTCATTGAACCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| CDS-3UTR GCA 90 bp | CAGTATAGGGCGGGGAGAAGTTGCCTGGTTGTAGCCATGGACCTTCTGCACAGCTCTTGGATCTCTTGTTaGATCGAGAGTAGTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QYRAGRSCLVVAMDLLHSSWISC*IESSLL Trigger: AAGAAGACTACTCTCGATGCAACAAGAGATCCAAGA...GCTGTGCAGAAGGTCCATGGCTACAACCAGGCAACTTCTCCCCGCCCTATACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112357.9 |
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| CDS-3UTR GCA 90 bp | CAAGCAAGCCAACAAGCAGCACTCCTCCATGGTCTCTGCTTCAGTTCCTGCCCTTGCAGCATACCTTCTTaGCTTCCTTGCCTTTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: QASQQAALLHGLCFSSCPCSIPS*LPCLCF Trigger: AAAACAAAGGCAAGGAAGGCAAGAAGGTATGCTGCA...AGGGCAGGAACTGAAGCAGAGACCATGGAGGAGTGCTGCTTGTTGGCTTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR CAA 72 bp | AGGGGTGGGCACAAGAAGGCGGATGTCCTCAGGTTGTaGGTCAGGTACCAGTTAAATAAAGATGGAAGACAC | + |
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Preference number: 4 (lower is better) Translates to: RGGHKKADVLRL*VRYQLNKDGRH Trigger: GTGTCTTCCATCTTTATTTAACTGGTACCTGACCAACAACCTGAGGACATCCGCCTTCTTGTGCCCACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| 3UTR CAA 72 bp | AGAGAAGCTAGCAGCTCAGGCTCCACCAAGACAACCTaGATCCCAGCAAATCTGCAGAAAGCCCAAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: REASSSGSTKTT*IPANLQKAQET Trigger: TGTTTCTTGGGCTTTCTGCAGATTTGCTGGGATCAAGGTTGTCTTGGTGGAGCCTGAGCTGCTAGCTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189062.2 |
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| CDS-3UTR CCA 90 bp | ATGATGGCTTCCTTGGCTTACAGACCATCATGCACCACCATGCTGCCTGGTTCTCTTAATCCTTGGACTTaGTCTTGCAGCATACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: MMASLAYRPSCTTMLPGSLNPWT*SCSIPS Trigger: TGAAGGTATGCTGCAAGACCAAGTCCAAGGATTAAG...AGAACCAGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAGCCATCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112357.9 |
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| 3UTR CAA 72 bp | CGTGCTGATGTATTAGCATCTTTAATGATGGCTTCCTaGGCTTACAGACCATCATGCACCACCATGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RADVLASLMMAS*AYRPSCTTMLP Trigger: AGGCAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAGCCATCATTAAAGATGCTAATACATCAGCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112357.9 ENSMUST00000188169.7 |
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| 3UTR CAA 72 bp | ATGTTCCTGTTTAGACTAGCCCCCAGTATTGTACCTTaGTATAGGGCTTGTTTTATCTGCCATAGAAATTGC | + |
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Preference number: 4 (lower is better) Translates to: MFLFRLAPSIVP*YRACFICHRNC Trigger: GCAATTTCTATGGCAGATAAAACAAGCCCTATACAAAGGTACAATACTGGGGGCTAGTCTAAACAGGAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| CDS-3UTR CCA 90 bp | AACCCTTTCCTCCCTGAGATGATTTTGTTTAGTGTTTCATCACAGCAAGTAGAAAATGATTTTTATGGCTaGATCTTCACTGTCATCGCT | + |
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Preference number: 4 (lower is better) Translates to: NPFLPEMILFSVSSQQVENDFYG*IFTVIA Trigger: AGCGATGACAGTGAAGATCCAGCCATAAAAATCATT...TTCTACTTGCTGTGATGAAACACTAAACAAAATCATCTCAGGGAGGAAAGGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| 3UTR CAA 72 bp | GTGTGCCAAATTAACCCTTTCCTCCCTGAGATGATTTaGTTTAGTGTTTCATCACAGCAAGTAGAAAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VCQINPFLPEMI*FSVSSQQVESK Trigger: TTTACTTTCTACTTGCTGTGATGAAACACTAAACAAAATCATCTCAGGGAGGAAAGGGTTAATTTGGCACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| CDS TCA 90 bp | TGTCATCGCTGTCCTCAGAGCCGTGCGGCCTTGTGGGTCTCTTCATaGCAGGCGGTTTCCAGGGAGGCGAGGCCAGAAGCTGCACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CHRCPQSRAALWVSS*QAVSREARPEAAPA Trigger: AGCTGGTGCAGCTTCTGGCCTCGCCTCCCTGGAAACCGCCTGTCATGAAGAGACCCACAAGGCCGCACGGCTCTGAGGACAGCGATGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 ENSMUST00000191418.2 |
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| CDS GCA 90 bp | ATTTTTATGGCTGGATCTTCACTGTCATCGCTGTCCTCAGAGCCGTaGGGCCTTGTGGGTCTCTTCATGACAGGCGGTTTCCAGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: IFMAGSSLSSLSSEP*GLVGLFMTGGFQGG Trigger: GCCTCCCTGGAAACCGCCTGTCATGAAGAGACCCACAAGGCCGCACGGCTCTGAGGACAGCGATGACAGTGAAGATCCAGCCATAAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000188169.7 ENSMUST00000191418.2 |
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| CDS-3UTR CAA 90 bp | ACGTTGTTCTCGGAGCTCTCCCACAGAAAGCTGTCCTCAGGGTTCTGGCATGGATCCTTGGACTTGGTCTaGCAGCATACCTTCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: TLFSELSHRKLSSGFWHGSLDLV*QHTFLP Trigger: AGGCAAGAAGGTATGCTGCAAGACCAAGTCCAAGGA...TCCATGCCAGAACCCTGAGGACAGCTTTCTGTGGGAGAGCTCCGAGAACAACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188169.7 |
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| CDS-3UTR CAA 90 bp | GCAGAGGGTAGGAGGCTCAGGCAGTTTCCCTTACAGAAGAGCGTGCTGATGTATTCCTTGGACTTGGTCTaGCAGCATACCTTCACTGTC | + |
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Preference number: 5 (lower is better) Translates to: AEGRRLRQFPLQKSVLMYSLDLV*QHTFTV Trigger: GACAGTGAAGGTATGCTGCAAGACCAAGTCCAAGGA...ATACATCAGCACGCTCTTCTGTAAGGGAAACTGCCTGAGCCTCCTACCCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112357.9 |
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| CDS-3UTR CAA 90 bp | GCATCTTTAATGATGGCTTCCTTGGCTTACAGACCATCATGCACCACCATGCTGTTCTGGCATGGAAAGTaGTTCCTGGGGTTCTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: ASLMMASLAYRPSCTTMLFWHGK*FLGFWY Trigger: ATACCAGAACCCCAGGAACAACTTTCCATGCCAGAA...CAGCATGGTGGTGCATGATGGTCTGTAAGCCAAGGAAGCCATCATTAAAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112357.9 |
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| CDS TCA 72 bp | TGTCCTCAGAGCCGTGCGGCCTTGTGGGTCTCTTCATaGCAGGCGGTTTCCAGGGAGGCGAGGCCAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: CPQSRAALWVSS*QAVSREARPEA Trigger: AGCTTCTGGCCTCGCCTCCCTGGAAACCGCCTGTCATGAAGAGACCCACAAGGCCGCACGGCTCTGAGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000112357.9 ENSMUST00000185436.7 ENSMUST00000187339.7 ENSMUST00000188169.7 ENSMUST00000191418.2 |
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| CDS GCA 72 bp | GCTGGATCTTCACTGTCATCGCTGTCCTCAGAGCCGTaGGGCCTTGTGGGTCTCTTCATGACAGGCGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AGSSLSSLSSEP*GLVGLFMTGGF Trigger: GAAACCGCCTGTCATGAAGAGACCCACAAGGCCGCACGGCTCTGAGGACAGCGATGACAGTGAAGATCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000188169.7 ENSMUST00000191418.2 |
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| CDS GCA 72 bp | AGCATACCTTCACTGTCATCGCTGTCCTCAGAGCCGTaGGGCCTTGTGGGTCTCTTCATGACAGGCGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SIPSLSSLSSEP*GLVGLFMTGGF Trigger: GAAACCGCCTGTCATGAAGAGACCCACAAGGCCGCACGGCTCTGAGGACAGCGATGACAGTGAAGGTATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112357.9 |
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| CDS GCA 72 bp | CAAGTCTCTTCACTGTCATCGCTGTCCTCAGAGCCGTaGGGCCTTGTGGGTCTCTTCATGACAGGCGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: QVSSLSSLSSEP*GLVGLFMTGGF Trigger: GAAACCGCCTGTCATGAAGAGACCCACAAGGCCGCACGGCTCTGAGGACAGCGATGACAGTGAAGAGACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187339.7 |
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