Pregenerated sensors for LELP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027927Ensembl transcript IDs: ENSMUST00000029535.6
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGTAACAACCACCACAAAAGCAAATCCTCCAAGGGAGCAGAAGTaGTCCACAGCAGAGGAAGGTCTTTGTCAGTTCATGGTTTCACTT | + |
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Preference number: 1 (lower is better) Translates to: CVTTTTKANPPREQK*STAEEGLCQFMVSL Trigger: AAGTGAAACCATGAACTGACAAAGACCTTCCTCTGCTGTGGATCACTTCTGCTCCCTTGGAGGATTTGCTTTTGTGGTGGTTGTTACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAGTGGTGGCAAGGTTGGTGTCATGCATTGCCCTAGCAGGACTTGGCATGGTAATGGAGGCCAGTaGTGGGGGTGGTGGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: EASGGKVGVMHCPSRTWHGNGGQ*WGWWSV Trigger: AACACTCCACCACCCCCACCACTGGCCTCCATTACC...ATGCCAAGTCCTGCTAGGGCAATGCATGACACCAACCTTGCCACCACTGGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGGGGTCCTCAAAGATATCTCACTCTCACGGATTGCTTCTTGGCCGAATCAGTGGTGGGGGTGGTaGAGTGTTGCCCATGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GCGVLKDISLSRIASWPNQWWGW*SVAHGA Trigger: GGCACCATGGGCAACACTCCACCACCCCCACCACTG...ATTCGGCCAAGAAGCAATCCGTGAGAGTGAGATATCTTTGAGGACCCCACAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCAAATCCTCCAAGGGAGCAGAAGTGATCCACAGCAGAGGAAGGTCTTTGGGCCAGTGGTGGGGGTaGTGGAGTGTTGCCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: KSKSSKGAEVIHSRGRSLGQWWG*WSVAHG Trigger: ACCATGGGCAACACTCCACCACCCCCACCACTGGCC...CAAAGACCTTCCTCTGCTGTGGATCACTTCTGCTCCCTTGGAGGATTTGCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR-3UTR TCA 90 bp | TCATGGTTTCACTTCCAGCCCCACAATGTTGTAGGTGGTAATGGAGGCCAGTGGCCAAGGGAGCAGAAGTaGTCCACAGCAGAGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SWFHFQPHNVVGGNGGQWPREQK*STAEEG Trigger: ACCTTCCTCTGCTGTGGATCACTTCTGCTCCCTTGG...CCACTGGCCTCCATTACCACCTACAACATTGTGGGGCTGGAAGTGAAACCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAGGAAGGTCTTTGTCAGTTCATGGTTTCACTTCCAGGCCCACACATTGTAATGGAGGCCAGTGGTaGGGGTGGTGGAGTGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SRGRSLSVHGFTSRPTHCNGGQW*GWWSVA Trigger: GGCAACACTCCACCACCCCCACCACTGGCCTCCATT...ACAATGTGTGGGCCTGGAAGTGAAACCATGAACTGACAAAGACCTTCCTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGAGGCTGTGGGGTCCTCAAAGATATCTCACTCTCACGGATTGCTTCTTGGCGTCTTTGTCAGTTCATaGTTTCACTTCCAGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VEAVGSSKISHSHGLLLGVFVSS*FHFQAH Trigger: GTGGGCCTGGAAGTGAAACCATGAACTGACAAAGAC...GCCAAGAAGCAATCCGTGAGAGTGAGATATCTTTGAGGACCCCACAGCCTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR CCA 72 bp | GGCAAGGTTGGTGTCATGCATTGCCCTAGCAGGACTTaGCATTCTTTGGAAAGGAACCTTCCCCTAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: GKVGVMHCPSRT*HSLERNLPLGD Trigger: GTCACCTAGGGGAAGGTTCCTTTCCAAAGAATGCCAAGTCCTGCTAGGGCAATGCATGACACCAACCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR TCA 72 bp | GACTTGGCATTCTTTGGAAAGGAACCTTCCCCTAGGTaGCAGGTAGAGGCTGTGGGGTCCTCAAAGATATCT | + |
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Preference number: 3 (lower is better) Translates to: DLAFFGKEPSPR*QVEAVGSSKIS Trigger: AGATATCTTTGAGGACCCCACAGCCTCTACCTGTCACCTAGGGGAAGGTTCCTTTCCAAAGAATGCCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR GCA 72 bp | CTGTGGGGTCCTCAAAGATATCTCACTCTCACGGATTaGTTCTTGGCCGAATGCTGTGTAACAACCACCACA | + |
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Preference number: 3 (lower is better) Translates to: LWGPQRYLTLTD*FLAECCVTTTT Trigger: TGTGGTGGTTGTTACACAGCATTCGGCCAAGAAGCAATCCGTGAGAGTGAGATATCTTTGAGGACCCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR TCA 72 bp | ACCACCACAAAAGCAAATCCTCCAAGGGAGCAGAAGTaGTCCACAGCAGAGGAAGGTCTTTGTCAGTTCATG | + |
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Preference number: 3 (lower is better) Translates to: TTTKANPPREQK*STAEEGLCQFM Trigger: CATGAACTGACAAAGACCTTCCTCTGCTGTGGATCACTTCTGCTCCCTTGGAGGATTTGCTTTTGTGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR GCA 72 bp | AGATATCTCACTCTCACGGATTGCTTCTTGGCCGAATaGTGTGTAACAACCACCACAAAAGCAAATCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: RYLTLTDCFLAE*CVTTTTKANPP Trigger: TGGAGGATTTGCTTTTGTGGTGGTTGTTACACAGCATTCGGCCAAGAAGCAATCCGTGAGAGTGAGATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR TCA 90 bp | GTAGAGGCTGTGGGGTCCTCAAAGATATCTCACTCTCACGGATTGCTTCTTGGCGTGGAACACTGCGACTaGCACACCAGGGGGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: VEAVGSSKISHSHGLLLGVEHCD*HTRGHG Trigger: TCCATGCCCCCTGGTGTGTCAGTCGCAGTGTTCCAC...GCCAAGAAGCAATCCGTGAGAGTGAGATATCTTTGAGGACCCCACAGCCTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CCA 90 bp | GAGGCCAGTGGTGGCAAGGTTGGTGTCATGCATTGCCCTAGCAGGACTTGGCATACACAGTGGGGAAGTTaGTGTGGAACACTGCGACTG | + |
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Preference number: 4 (lower is better) Translates to: EASGGKVGVMHCPSRTWHTQWGS*CGTLRL Trigger: CAGTCGCAGTGTTCCACACCAACTTCCCCACTGTGT...ATGCCAAGTCCTGCTAGGGCAATGCATGACACCAACCTTGCCACCACTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CCA 90 bp | AGGCCAGTGGTGGCAAGGTTGGTGTCATGCATTGCCCTAGCAGGACTTGGCATTTCTTGGGCTACACAGTaGGGGACACAGTGGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RPVVARLVSCIALAGLGISWATQ*GTQWGS Trigger: ACTTCCCCACTGTGTCCCCCACTGTGTAGCCCAAGA...AATGCCAAGTCCTGCTAGGGCAATGCATGACACCAACCTTGCCACCACTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR TCA 90 bp | CACGGATTGCTTCTTGGCCGAATGCTGTGTAACAACCACCACAAAAGCAAATCCTGGGAGGGCAAGGCTTaGCACATCCTTTTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: HGLLLGRMLCNNHHKSKSWEGKA*HILFGG Trigger: GCCCCCAAAAAGGATGTGTCAAGCCTTGCCCTCCCA...GGATTTGCTTTTGTGGTGGTTGTTACACAGCATTCGGCCAAGAAGCAATCCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR TCA 90 bp | CACAAAAGCAAATCCTCCAAGGGAGCAGAAGTGATCCACAGCAGAGGAAGGTCTTCCTTTTTGGGGGCATaGTGGTGGACAACATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HKSKSSKGAEVIHSRGRSSFLGA*WWTTCQ Trigger: CTGGCATGTTGTCCACCATCATGCCCCCAAAAAGGA...AGACCTTCCTCTGCTGTGGATCACTTCTGCTCCCTTGGAGGATTTGCTTTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CCA 90 bp | GGTGGCAAGGTTGGTGTCATGCATTGCCCTAGCAGGACTTGGCATTCTTTGGAATTTAGACAGCTGGGCTaGCACTTGGTCTCGCACTTT | + |
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Preference number: 4 (lower is better) Translates to: GGKVGVMHCPSRTWHSLEFRQLG*HLVSHF Trigger: AAAGTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAA...TTCCAAAGAATGCCAAGTCCTGCTAGGGCAATGCATGACACCAACCTTGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| 3UTR CAA 72 bp | GCTGTGGGGTCCTCAAAGATATCTCACTCTCACGGATaGCTTCTTGGCCGAATGCTGTGTAACAACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: AVGSSKISHSHG*LLGRMLCNNHH Trigger: GTGGTGGTTGTTACACAGCATTCGGCCAAGAAGCAATCCGTGAGAGTGAGATATCTTTGAGGACCCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CCA 90 bp | GAAGTGATCCACAGCAGAGGAAGGTCTTTGTCAGTTCATGGTTTCACTTCCAGGAGCTGGGCTGGCACTTaGTCTCGCACTTTTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: EVIHSRGRSLSVHGFTSRSWAGT*SRTFVH Trigger: GTGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCT...CCTGGAAGTGAAACCATGAACTGACAAAGACCTTCCTCTGCTGTGGATCACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CCA 90 bp | ACAGCAGAGGAAGGTCTTTGTCAGTTCATGGTTTCACTTCCAGGCCCACACATTGTGGGGAAGTTGGTGTaGAACACTGCGACTGACACA | + |
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Preference number: 4 (lower is better) Translates to: TAEEGLCQFMVSLPGPHIVGKLV*NTATDT Trigger: TGTGTCAGTCGCAGTGTTCCACACCAACTTCCCCAC...AATGTGTGGGCCTGGAAGTGAAACCATGAACTGACAAAGACCTTCCTCTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CCA 90 bp | ACATGTTTACTTGTCAGTTCATGGTTTCACTTCCAGCCCCACAATGTTGTAGGTACACACCAGGGGGCATaGAGGACATGGAGGACATGG | + |
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Preference number: 4 (lower is better) Translates to: TCLLVSSWFHFQPHNVVGTHQGA*RTWRTW Trigger: CCATGTCCTCCATGTCCTCCATGCCCCCTGGTGTGT...ACCTACAACATTGTGGGGCTGGAAGTGAAACCATGAACTGACAAGTAAACATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CCA 90 bp | AGAGGAAGGTCTTTGTCAGTTCATGGTTTCACTTCCAGGCCCACACATTGTAGGTTGACACATCCTTTTTaGGGGCATGATGGTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: RGRSLSVHGFTSRPTHCRLTHPF*GHDGGQ Trigger: TTGTCCACCATCATGCCCCCAAAAAGGATGTGTCAA...CCTACAATGTGTGGGCCTGGAAGTGAAACCATGAACTGACAAAGACCTTCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 90 bp | TGCCAGGGTACCGGAGCATCTTGGGCTACACAGTGGGGGACACAGTaGGGAAGTTGGTGTGGAACACTGCGACTGACACACCAGGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CQGTGASWATQWGTQ*GSWCGTLRLTHQGA Trigger: TGCCCCCTGGTGTGTCAGTCGCAGTGTTCCACACCAACTTCCCCACTGTGTCCCCCACTGTGTAGCCCAAGATGCTCCGGTACCCTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 90 bp | TGGTGGACAACATGCCAGGGTACCGGAGCATCTTGGGCTACACAGTaGGGGACACAGTGGGGAAGTTGGTGTGGAACACTGCGACTGACA | + |
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Preference number: 5 (lower is better) Translates to: WWTTCQGTGASWATQ*GTQWGSWCGTLRLT Trigger: TGTCAGTCGCAGTGTTCCACACCAACTTCCCCACTGTGTCCCCCACTGTGTAGCCCAAGATGCTCCGGTACCCTGGCATGTTGTCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 90 bp | CATGGAGAAGGACACTTGGGAGGGCAAGGCTTGACACATCCTTTTTaGGGGCATGATGGTGGACAACATGCCAGGGTACCGGAGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: HGEGHLGGQGLTHPF*GHDGGQHARVPEHL Trigger: AAGATGCTCCGGTACCCTGGCATGTTGTCCACCATCATGCCCCCAAAAAGGATGTGTCAAGCCTTGCCCTCCCAAGTGTCCTTCTCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CAA 90 bp | ATCCACAGCAGAGGAAGGTCTTTGTCAGTTCATGGTTTCACTTCCAGGCCCACACAGCTGGGCTGGCACTaGGTCTCGCACTTTTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: IHSRGRSLSVHGFTSRPTQLGWH*VSHFCS Trigger: TGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCTG...TGTGGGCCTGGAAGTGAAACCATGAACTGACAAAGACCTTCCTCTGCTGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 90 bp | GCGAACACTTTTCAGAGCAGCGTTGTAGCAGCTTGTTTAGACAGCTaGGCTGGCACTTGGTCTCGCACTTTTGTTCACATCTGGGATCAC | + |
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Preference number: 5 (lower is better) Translates to: ANTFQSSVVAACLDS*AGTWSRTFVHIWDH Trigger: GTGATCCCAGATGTGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAACAAGCTGCTACAACGCTGCTCTGAAAAGTGTTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CAA 90 bp | AGCAGAGGAAGGTCTTTGTCAGTTCATGGTTTCACTTCCAGGCCCACACATTGTCAGCGTTGTAGCAGCTaGTTTAGACAGCTGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SRGRSLSVHGFTSRPTHCQRCSS*FRQLGW Trigger: CCAGCCCAGCTGTCTAAACAAGCTGCTACAACGCTG...ACAATGTGTGGGCCTGGAAGTGAAACCATGAACTGACAAAGACCTTCCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CAA 90 bp | CTGTGTAACAACCACCACAAAAGCAAATCCTCCAAGGGAGCAGAAGTGATCCACGACACAGTGGGGAAGTaGGTGTGGAACACTGCGACT | + |
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Preference number: 5 (lower is better) Translates to: LCNNHHKSKSSKGAEVIHDTVGK*VWNTAT Trigger: AGTCGCAGTGTTCCACACCAACTTCCCCACTGTGTC...GTGGATCACTTCTGCTCCCTTGGAGGATTTGCTTTTGTGGTGGTTGTTACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CAA 90 bp | AGCAGAGGAAGGTCTTTGTCAGTTCATGGTTTCACTTCCAGGCCCACACATTGTCATGGAGAAGGACACTaGGGAGGGCAAGGCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: SRGRSLSVHGFTSRPTHCHGEGH*GGQGLT Trigger: TGTCAAGCCTTGCCCTCCCAAGTGTCCTTCTCCATG...ACAATGTGTGGGCCTGGAAGTGAAACCATGAACTGACAAAGACCTTCCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 90 bp | CACTTTTCAGAGCAGCGTTGTAGCAGCTTGTTTAGACAGCTGGGCTaGCACTTGGTCTCGCACTTTTGTTCACATCTGGGATCACAATTC | + |
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Preference number: 5 (lower is better) Translates to: HFSEQRCSSLFRQLG*HLVSHFCSHLGSQF Trigger: GAATTGTGATCCCAGATGTGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAACAAGCTGCTACAACGCTGCTCTGAAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CAA 90 bp | TCCTCAAAGATATCTCACTCTCACGGATTGCTTCTTGGCCGAATGCTGTGTAACCTTGGTCTCGCACTTTaGTTCACATCTGGGATCACA | + |
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Preference number: 5 (lower is better) Translates to: SSKISHSHGLLLGRMLCNLGLAL*FTSGIT Trigger: TGTGATCCCAGATGTGAACAAAAGTGCGAGACCAAG...GTTACACAGCATTCGGCCAAGAAGCAATCCGTGAGAGTGAGATATCTTTGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS-3UTR CAA 90 bp | ACATGTTTACTTGTCAGTTCATGGTTTCACTTCCAGCCCCACAATGTTGTAGGTCTGGGATCACAATTCTaGAGACCATTCTTAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: TCLLVSSWFHFQPHNVVGLGSQF*RPFLES Trigger: TGACTCTAAGAATGGTCTCAAGAATTGTGATCCCAG...ACCTACAACATTGTGGGGCTGGAAGTGAAACCATGAACTGACAAGTAAACATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS TCA 72 bp | GGACACAGTGGGGAAGTTGGTGTGGAACACTGCGACTaGCACACCAGGGGGCATGGAGGACATGGAGGACAT | + |
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Preference number: 6 (lower is better) Translates to: GHSGEVGVEHCD*HTRGHGGHGGH Trigger: ATGTCCTCCATGTCCTCCATGCCCCCTGGTGTGTCAGTCGCAGTGTTCCACACCAACTTCCCCACTGTGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 72 bp | ACCGGAGCATCTTGGGCTACACAGTGGGGGACACAGTaGGGAAGTTGGTGTGGAACACTGCGACTGACACAC | + |
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Preference number: 6 (lower is better) Translates to: TGASWATQWGTQ*GSWCGTLRLTH Trigger: GTGTGTCAGTCGCAGTGTTCCACACCAACTTCCCCACTGTGTCCCCCACTGTGTAGCCCAAGATGCTCCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 72 bp | ACATGCCAGGGTACCGGAGCATCTTGGGCTACACAGTaGGGGACACAGTGGGGAAGTTGGTGTGGAACACTG | + |
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Preference number: 6 (lower is better) Translates to: TCQGTGASWATQ*GTQWGSWCGTL Trigger: CAGTGTTCCACACCAACTTCCCCACTGTGTCCCCCACTGTGTAGCCCAAGATGCTCCGGTACCCTGGCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 72 bp | GGACACTTGGGAGGGCAAGGCTTGACACATCCTTTTTaGGGGCATGATGGTGGACAACATGCCAGGGTACCG | + |
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Preference number: 6 (lower is better) Translates to: GHLGGQGLTHPF*GHDGGQHARVP Trigger: CGGTACCCTGGCATGTTGTCCACCATCATGCCCCCAAAAAGGATGTGTCAAGCCTTGCCCTCCCAAGTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CAA 72 bp | ATGATGGTGGACAACATGCCAGGGTACCGGAGCATCTaGGGCTACACAGTGGGGGACACAGTGGGGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: MMVDNMPGYRSI*GYTVGDTVGKL Trigger: CAACTTCCCCACTGTGTCCCCCACTGTGTAGCCCAAGATGCTCCGGTACCCTGGCATGTTGTCCACCATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS TCA 72 bp | GTAGGCATGGAGAAGGACACTTGGGAGGGCAAGGCTTaGCACATCCTTTTTGGGGGCATGATGGTGGACAAC | + |
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Preference number: 6 (lower is better) Translates to: VGMEKDTWEGKA*HILFGGMMVDN Trigger: GTTGTCCACCATCATGCCCCCAAAAAGGATGTGTCAAGCCTTGCCCTCCCAAGTGTCCTTCTCCATGCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CAA 72 bp | GGTAGGCATGGAGAAGGACACTTGGGAGGGCAAGGCTaGACACATCCTTTTTGGGGGCATGATGGTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: GRHGEGHLGGQG*THPFWGHDGGQ Trigger: TTGTCCACCATCATGCCCCCAAAAAGGATGTGTCAAGCCTTGCCCTCCCAAGTGTCCTTCTCCATGCCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 72 bp | GAGCAGCGTTGTAGCAGCTTGTTTAGACAGCTGGGCTaGCACTTGGTCTCGCACTTTTGTTCACATCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: EQRCSSLFRQLG*HLVSHFCSHLG Trigger: TCCCAGATGTGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAACAAGCTGCTACAACGCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CAA 72 bp | TCTAGCGAACACTTTTCAGAGCAGCGTTGTAGCAGCTaGTTTAGACAGCTGGGCTGGCACTTGGTCTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: SSEHFSEQRCSS*FRQLGWHLVSH Trigger: GTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAACAAGCTGCTACAACGCTGCTCTGAAAAGTGTTCGCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CAA 90 bp | GGGCACTTGTCTAGCGAACACTTTTCAGAGCAGCGTTGTAGCAGCTaGTTTAGACAGCTGGGCTGGCACTTGGTCTCGCACTTTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GHLSSEHFSEQRCSS*FRQLGWHLVSHFCS Trigger: TGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAACAAGCTGCTACAACGCTGCTCTGAAAAGTGTTCGCTAGACAAGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 72 bp | TTTCAGAGCAGCGTTGTAGCAGCTTGTTTAGACAGCTaGGCTGGCACTTGGTCTCGCACTTTTGTTCACATC | + |
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Preference number: 6 (lower is better) Translates to: FQSSVVAACLDS*AGTWSRTFVHI Trigger: GATGTGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAACAAGCTGCTACAACGCTGCTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CAA 72 bp | CGTTGTAGCAGCTTGTTTAGACAGCTGGGCTGGCACTaGGTCTCGCACTTTTGTTCACATCTGGGATCACAA | + |
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Preference number: 6 (lower is better) Translates to: RCSSLFRQLGWH*VSHFCSHLGSQ Trigger: TTGTGATCCCAGATGTGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAACAAGCTGCTACAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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| CDS CCA 72 bp | GTTGTAGCAGCTTGTTTAGACAGCTGGGCTGGCACTTaGTCTCGCACTTTTGTTCACATCTGGGATCACAAT | + |
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Preference number: 6 (lower is better) Translates to: VVAACLDSWAGT*SRTFVHIWDHN Trigger: ATTGTGATCCCAGATGTGAACAAAAGTGCGAGACCAAGTGCCAGCCCAGCTGTCTAAACAAGCTGCTACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029535.6 |
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