Pregenerated sensors for LEKR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074579Ensembl transcript IDs: ENSMUST00000099075.4, ENSMUST00000177434.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTTGGAAGTAGAGCAGGAAATTCAGAAGTTCGAAATCATCCTTTaGTACATGGAAACACATGACCCAGTAGAAAACTGGATACTTGAT | + |
|
Preference number: 1 (lower is better) Translates to: HLEVEQEIQKFEIIL*YMETHDPVENWILD Trigger: ATCAAGTATCCAGTTTTCTACTGGGTCATGTGTTTCCATGTAGCAAAGGATGATTTCGAACTTCTGAATTTCCTGCTCTACTTCCAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGCCCTGGGTTTGTTTCCCCAGCACCAAATAAACCTGGTGTGGTGACACATCTACATGGAAACACATaGCCCAGTAGAAAACTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: QSPGFVSPAPNKPGVVTHLHGNT*PSRKLD Trigger: ATCCAGTTTTCTACTGGGTCATGTGTTTCCATGTAG...ATGTGTCACCACACCAGGTTTATTTGGTGCTGGGGAAACAAACCCAGGGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR-3UTR TCA 90 bp | CTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCGTCTCTGCCCTGCTGTaGAAGGGTGTGTGTCCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: LCTFLVNYIYSYVCFPVPVSALL*KGVCPV Trigger: CACGGGACACACACCCTTTCACAGCAGGGCAGAGAC...GGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCAGCAAAGTATCACAGTAAGGCTACCCTAAAGATAAAGCGTGGTGCTGAGTGGTGTGGTGACACATaGCATCACTTGGAAGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: CPAKYHSKATLKIKRGAEWCGDT*HHLEVE Trigger: CTCTACTTCCAAGTGATGGCATGTGTCACCACACCA...CTCAGCACCACGCTTTATCTTTAGGGTAGCCTTACTGTGATACTTTGCTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR CAA 90 bp | CCCTTTGAAAACTGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTaGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCGGTT | + |
|
Preference number: 2 (lower is better) Translates to: PFENCGFTVPSFVHF*LTTSTAMFVSRYPV Trigger: AACCGGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACAGTTTTCAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| 3UTR-3UTR GCA 90 bp | AACTCTAGAAGACACACTACATTAAAAAGGGGAGACTTGTCCAGCAAAGTATCATACTTGGTAGAGTATTaGCTAGCATACACAGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: NSRRHTTLKRGDLSSKVSYLVEY*LAYTEP Trigger: GGGCTCTGTGTATGCTAGGCAATACTCTACCAAGTA...TGATACTTTGCTGGACAAGTCTCCCCTTTTTAATGTAGTGTGTCTTCTAGAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR CAA 90 bp | GAACAGTATTATATTAGAAACTCCACAGATTGGAGATATAGCTACTaGGTAGAGTATTGCCTAGCATACACAGAGCCCTGGGTTTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EQYYIRNSTDWRYSY*VEYCLAYTEPWVCF Trigger: GAAACAAACCCAGGGCTCTGTGTATGCTAGGCAATACTCTACCAAGTAGCTATATCTCCAATCTGTGGAGTTTCTAATATAATACTGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGAAGTAGAGCAGGAAATTCAGAAGTTCGAAATCATCCTTTGCTACATGGAAGAAAACTGGATACTTaGTGTGTGCAAGTAGTCATC | + |
|
Preference number: 2 (lower is better) Translates to: LGSRAGNSEVRNHPLLHGRKLDT*CVQVVI Trigger: GATGACTACTTGCACACATCAAGTATCCAGTTTTCT...TCCATGTAGCAAAGGATGATTTCGAACTTCTGAATTTCCTGCTCTACTTCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR-3UTR CCA 90 bp | AACTCTAGAAGACACACTACATTAAAAAGGGGAGACTTGTCCAGCAAAGTATCAAGAGAAATATATAGCTaGCCTGGAATTCTCAGCGCT | + |
|
Preference number: 2 (lower is better) Translates to: NSRRHTTLKRGDLSSKVSREIYS*PGILSA Trigger: AGCGCTGAGAATTCCAGGCCAGCTATATATTTCTCT...TGATACTTTGCTGGACAAGTCTCCCCTTTTTAATGTAGTGTGTCTTCTAGAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR GCA 72 bp | ATGTTTGTTTCCCGGTACCCGGTTACAGTGAGTCTCTaGCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: MFVSRYPVTVSL*PAVKGCVSRGW Trigger: CCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTACCGGGAAACAAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| 3UTR-3UTR CAA 90 bp | CATAGAACTGATGGCCAAGGCTCTTTCCTTTCTCAGACTGCAGAGGTGGGGCTCATCATGACACAGACCTaGGCAGAATTTGGCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HRTDGQGSFLSQTAEVGLIMTQT*AEFGTV Trigger: CACTGTGCCAAATTCTGCCAAGGTCTGTGTCATGAT...GAGCCCCACCTCTGCAGTCTGAGAAAGGAAAGAGCCTTGGCCATCAGTTCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR CCA 72 bp | CAAAGGCACAGCAAAGGATATAGAGAAATATATAGCTaGCCTGGAATTCTCAGCGCTTCTGCCCCAGGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: QRHSKGYREIYS*PGILSASAPGP Trigger: CGGACCTGGGGCAGAAGCGCTGAGAATTCCAGGCCAGCTATATATTTCTCTATATCCTTTGCTGTGCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR TCA 72 bp | AGTAAGGCTACCCTAAAGATAAAGCGTGGTGCTGAGTaGCTGGGAGGCAGTGAGTCACTAGCACAAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SKATLKIKRGAE*LGGSESLAQNR Trigger: TCTGTTTTGTGCTAGTGACTCACTGCCTCCCAGTCACTCAGCACCACGCTTTATCTTTAGGGTAGCCTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR-3UTR CAA 90 bp | CATAGAACTGATGGCCAAGGCTCTTTCCTTTCTCAGACTGCAGAGGTGGGGCTCAGACCTTGGCAGAATTaGGCACAGTGTGAAAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: HRTDGQGSFLSQTAEVGLRPWQN*AQCENF Trigger: AAAATTTTCACACTGTGCCAAATTCTGCCAAGGTCT...GAGCCCCACCTCTGCAGTCTGAGAAAGGAAAGAGCCTTGGCCATCAGTTCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR TCA 72 bp | GGTTTGTTTCCCCAGCACCAAATAAACCTGGTGTGGTaGCACATGCCATCACTTGGAAGTAGAGCAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GLFPQHQINLVW*HMPSLGSRAGN Trigger: ATTTCCTGCTCTACTTCCAAGTGATGGCATGTGTCACCACACCAGGTTTATTTGGTGCTGGGGAAACAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR GCA 72 bp | TCCACAGATTGGAGATATAGCTACTTGGTAGAGTATTaGCTAGCATACACAGAGCCCTGGGTTTGTTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: STDWRYSYLVEY*LAYTEPWVCFP Trigger: GGGGAAACAAACCCAGGGCTCTGTGTATGCTAGGCAATACTCTACCAAGTAGCTATATCTCCAATCTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR GCA 72 bp | GTAGAGCAGGAAATTCAGAAGTTCGAAATCATCCTTTaGTACATGGAAACACATGACCCAGTAGAAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: VEQEIQKFEIIL*YMETHDPVENW Trigger: CCAGTTTTCTACTGGGTCATGTGTTTCCATGTAGCAAAGGATGATTTCGAACTTCTGAATTTCCTGCTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR CCA 72 bp | AGACTCAGACTTGAAAAGAATAGAACAAGGAAAGAGTaGGGCGGAGGCATATTTACTGCAAAAGACTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLRLEKNRTRKE*GGGIFTAKDLK Trigger: TTTTAAGTCTTTTGCAGTAAATATGCCTCCGCCCCACTCTTTCCTTGTTCTATTCTTTTCAAGTCTGAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| 3UTR CCA 72 bp | CATCAATGTACAATAATCCCAGCGCATACATGTAAGTaGCAAAGTCACAGGACACACTATTTTATTTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: HQCTIIPAHTCK*QSHRTHYFIYC Trigger: ACAATAAATAAAATAGTGTGTCCTGTGACTTTGCCACTTACATGTATGCGCTGGGATTATTGTACATTGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS-3UTR CCA 90 bp | GTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACGGGTCGGGGAAGCTGTaGGTTTTGGCAGTCCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTVSLCPAVKGCVSRGWDGSGKL*VLAVHA Trigger: TGCGTGGACTGCCAAAACCCACAGCTTCCCCGACCC...GTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | GTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACTTCCTCCGCTCCTCCTaGGCTCCAGGAGCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTVSLCPAVKGCVSRGWDFLRSS*APGAVL Trigger: AAGAACAGCTCCTGGAGCTCAGGAGGAGCGGAGGAA...GTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | AGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCCTCCTGAATCCTTTGCTGTCTTCTaGAGTCTCAACCCAAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCPAVKGCVSRGWDPPESFAVF*SLNPSA Trigger: GGCACTTGGGTTGAGACTTCAGAAGACAGCAAAGGA...TTCAGGAGGGTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | GTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACTTCTCTTCCTGTGACTaGCTGAACTGCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTVSLCPAVKGCVSRGWDFSSCD*LNCCSS Trigger: GCTGCTGCAGCAGTTCAGCCAGTCACAGGAAGAGAA...GTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | TACCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGGGGCTCTTTCCTTGCTaGGCTCAGCTTCAATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPVTVSLCPAVKGCVSRGGLFPC*AQLQSS Trigger: AGAAGATTGAAGCTGAGCTCAGCAAGGAAAGAGCCC...CCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | AGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCCTCCTGAAAGCTGTTCTTTGGCTTaGCTCAAAGCCTCCGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCPAVKGCVSRGWDPPESCSLA*LKASVS Trigger: ACTAACGGAGGCTTTGAGTCAAGCCAAAGAACAGCT...TTCAGGAGGGTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | GTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACTGGAACTCAATGAGATaGCGGGCTCTTTCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTVSLCPAVKGCVSRGWDWNSMR*RALSLL Trigger: CAGCAAGGAAAGAGCCCGGCATCTCATTGAGTTCCA...GTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | TATGTTTGTTTCCCGGTACCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGACTGGCTGAACTGCTaGAGCAGCTGTGTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YVCFPVPGYSESLPCCERDWLNC*SSCVWA Trigger: GGCCCAGACACAGCTGCTGCAGCAGTTCAGCCAGTC...CCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTACCGGGAAACAAACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | GTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCTGCGCACGGTTTCCTaGAGAAAAGTGTTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTVSLCPAVKGCVSRGWDLRTVS*RKVFSS Trigger: GGAAGAGAACACTTTTCTCCAGGAAACCGTGCGCAG...GTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCCTCCTGAAGTTGTCCAGCTCCTTTaGTGTCTTCTGAAGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLCPAVKGCVSRGWDPPEVVQLL*CLLKSQ Trigger: TTGAGACTTCAGAAGACAGCAAAGGAGCTGGACAAC...TTCAGGAGGGTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | TACCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGCCTGCAGCTGCTCGATaGTTTTCTGATGAGAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: YPVTVSLCPAVKGCVSRGPAAAR*FSDEKP Trigger: TGGTTTCTCATCAGAAAAGCATCGAGCAGCTGCAGG...CCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | CCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGTCTTTCCAGCTCGTCTaGCTTCTGTTTCATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVTVSLCPAVKGCVSRGWSFQLV*LLFHFL Trigger: AAGGAAATGAAACAGAAGTCAGACGAGCTGGAAAGA...CCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | TATGTTTGTTTCCCGGTACCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGCTGACTCAACCTCCTaGGAAGGATGGCTGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: YVCFPVPGYSESLPCCERADSTS*EGWLST Trigger: GGTTGACAGCCATCCTTCGCAGGAGGTTGAGTCAGC...CCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTACCGGGAAACAAACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | AGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCCTCCTGAATTAAAGAGAAGAGCTTaGTCCTGGAACTCAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCPAVKGCVSRGWDPPELKRRA*SWNSMR Trigger: TCTCATTGAGTTCCAGGATCAAGCTCTTCTCTTTAA...TTCAGGAGGGTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCCTCCTGAACTCTTCTGTGTATTGTaGATGGGATTCATGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCPAVKGCVSRGWDPPELFCVL*MGFMQF Trigger: AAACTGCATGAATCCCATGCACAATACACAGAAGAG...TTCAGGAGGGTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | GTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACTACTGTTCAAACTCCTaGCTAAGAGACTGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTVSLCPAVKGCVSRGWDYCSNS*LRDCSF Trigger: AAAGCTGCAGTCTCTTAGCCAGGAGTTTGAACAGTA...GTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | TACCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGCAACTCTTGCCTTCTTaGACTCGCTGTCACTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YPVTVSLCPAVKGCVSRGQLLPS*TRCHFY Trigger: ATAAAAGTGACAGCGAGTCCAAGAAGGCAAGAGTTG...CCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | GTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCATCCGACAACAATTTaGGACTTTTCATTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTVSLCPAVKGCVSRGWDHPTTI*DFSFPL Trigger: AAGAGGAAATGAAAAGTCTCAAATTGTTGTCGGATG...GTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTTTGAAAACTGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAGCCCCTGGGAGGATATaGCTGGGAAAGGGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPFENCGFTVPSFVHFLLAPGRI*LGKGRQ Trigger: CTGCCTGCCCTTTCCCAGGCATATCCTCCCAGGGGC...TAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACAGTTTTCAAAGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | TATGTTTGTTTCCCGGTACCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGTCATGCAGTTTTTCTTaGAGAGAGGCCACTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVCFPVPGYSESLPCCERSCSFS*REATSS Trigger: GCTGGAAGTGGCCTCTCTCCAAGAAAAACTGCATGA...CCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTACCGGGAAACAAACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | CTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCCTGGGAGGATATGCCTaGGAAAGGGCAGGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCTFLVNYIYSYVCFPVPLGGYA*ERAGSP Trigger: GGGACTGCCTGCCCTTTCCCAGGCATATCCTCCCAG...GGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCCTGGGTTTGTTTCCCCAGCACCAAATAAACCTGGTGTGGTGACACATTCAGGAGACATCTTTTaGATTTCTTCAGGTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSPGFVSPAPNKPGVVTHSGDIF*ISSGKA Trigger: TGCCTTACCTGAAGAAATCCAAAAGATGTCTCCTGA...ATGTGTCACCACACCAGGTTTATTTGGTGCTGGGGAAACAAACCCAGGGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS-3UTR TCA 90 bp | TTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCGGTTACAGTGATGCCTCCATCTGCTaGGACCTCAATATGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLVNYIYSYVCFPVPGYSDASIC*DLNMAA Trigger: TGCAGCCATATTGAGGTCTCAGCAGATGGAGGCATC...ACTGTAACCGGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTGTGACTGGCTGAACTaGTGCAGCAGCTGTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFTVPSFVHFLLTTSTAMCDWLN*CSSCVW Trigger: CCAGACACAGCTGCTGCAGCAGTTCAGCCAGTCACA...CATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | GGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGAGTGTTCTCTTCCTGTaGCTGGCTGAACTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFTVPSFVHFLLTTSTAMSVLFL*LAELLQ Trigger: CTGCAGCAGTTCAGCCAGTCACAGGAAGAGAACACT...CATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGCCAGGAGCTGTTCTTTaGCTTGACTCAAAGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GFTVPSFVHFLLTTSTAMPGAVL*LDSKPP Trigger: CGGAGGCTTTGAGTCAAGCCAAAGAACAGCTCCTGG...CATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCGGTTCTTCACACTCTCTaGGCACGGTTTCCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FVHFLLTTSTAMFVSRYPVLHTL*ARFPGE Trigger: TTCTCCAGGAAACCGTGCGCAGAGAGTGTGAAGAAC...CGGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | GTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCTGCAGCAGCTGTGTCTaGGCCAGCCTTACTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSFVHFLLTTSTAMFVSCSSCV*ASLTLS Trigger: GGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCA...GGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTGCATCTTCAACTCTTaGCTTCTTGGACTCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFTVPSFVHFLLTTSTAMCIFNS*LLGLAV Trigger: GACAGCGAGTCCAAGAAGGCAAGAGTTGAAGATGCA...CATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | TGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTTCACCTATCTTCCTCTaGAGGTCCTCATGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGFTVPSFVHFLLTTSTASPIFL*RSSCSC Trigger: GCAAGAACATGAGGACCTGCAGAGGAAGATAGGTGA...AGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTTTGTTATAAAGGTCTTCATAGAACTGATGGCCAAGGCTCTTTCCTTTCCGACCTTGCCTTCTTaGACTCGCTGTCACTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSFVIKVFIELMAKALSFPTLPS*TRCHFY Trigger: ATAAAAGTGACAGCGAGTCCAAGAAGGCAAGGTCGG...AAAGGAAAGAGCCTTGGCCATCAGTTCTATGAAGACCTTTATAACAAAGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS-3UTR TCA 90 bp | TTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCGCCAAGTGCCTCTACTTaGCACTGTAAATCTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVHFLLTTSTAMFVSRYPPSAST*HCKSSA Trigger: AGCACTAGATTTACAGTGTCAAGTAGAGGCACTTGG...CGGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | GTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCTGTCTCAGGGTTTCCTaGAGCTGCTCGATGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSFVHFLLTTSTAMFVSCLRVS*SCSMLF Trigger: GAAAAGCATCGAGCAGCTGCAGGAAACCCTGAGACA...GGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGGCACAGCAAAGGATATAGAGAAATATATAGCTGGCCTGGAATTCTCATACTGTTCAAACTCCTaGCTAAGAGACTGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKGTAKDIEKYIAGLEFSYCSNS*LRDCSF Trigger: AAAGCTGCAGTCTCTTAGCCAGGAGTTTGAACAGTA...TGAGAATTCCAGGCCAGCTATATATTTCTCTATATCCTTTGCTGTGCCTTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS-3UTR TCA 90 bp | CACAGCAAAGGATATAGAGAAATATATAGCTGGCCTGGAATTCTCAGCGCTTCTGAAGAATTAGATAGCTaGCGCCACAGTATTTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSKGYREIYSWPGILSASEELDS*RHSIYK Trigger: TTTGTAAATACTGTGGCGTCAGCTATCTAATTCTTC...AGAAGCGCTGAGAATTCCAGGCCAGCTATATATTTCTCTATATCCTTTGCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS-3UTR GCA 90 bp | CTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCAGACCTCAATATGGCTaGATCCGACAACAATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCTFLVNYIYSYVCFPVPRPQYG*IRQQFE Trigger: CTCAAATTGTTGTCGGATGCAGCCATATTGAGGTCT...GGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | CTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCTGTGCATGGGATTCATaGAGTTTTTCTTGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCTFLVNYIYSYVCFPVPCAWDS*SFSWRE Trigger: CTCTCTCCAAGAAAAACTGCATGAATCCCATGCACA...GGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | TGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTACGACACTGGAATTCTaGTACCAGATTTTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CGFTVPSFVHFLLTTSTATTLEF*YQIFQV Trigger: GACCTGAAAAATCTGGTAGCAGAATTCCAGTGTCGT...AGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCGGTTACAGTTCAGGAGACATCTTTTaGATTTCTTCAGGTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLVNYIYSYVCFPVPGYSSGDIF*ISSGKA Trigger: TGCCTTACCTGAAGAAATCCAAAAGATGTCTCCTGA...ACTGTAACCGGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| 3UTR CAA 72 bp | AACTGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTaGTTAACTACATCTACAGCTATGTTTGTTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NCGFTVPSFVHF*LTTSTAMFVSR Trigger: CCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTTTGAAAACTGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTATTAAGTAGCCTTTTGTaGCTTGACTCAGAGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: RPFENCGFTVPSFVHFLLLSSLL*LDSEIM Trigger: CATTATCTCTGAGTCAAGGCACAAAAGGCTACTTAA...TAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACAGTTTTCAAAGGGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | GTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCATTTCTTCCTGTGTCTaGAGCAGGAGAGATTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSFVHFLLTTSTAMFVSISSCV*SRRDLV Trigger: GACTAAATCTCTCCTGCTTCAGACACAGGAAGAAAT...GGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAACTACATCTACAGCTCATACCTTATTTCTCTaGGACACTGTCAGACTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CGFTVPSFVHFLLTTSTAHTLFL*DTVRLL Trigger: TAAAAGTCTGACAGTGTCCCAGAGAAATAAGGTATG...AGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR TCA 90 bp | AGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACGAAGAATTAGATAGCTaGCGCCACAGTATTTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFVHFLLTTSTAMFVSRYEELDS*RHSIYK Trigger: TTTGTAAATACTGTGGCGTCAGCTATCTAATTCTTC...GTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | AACTCTAGAAGACACACTACATTAAAAAGGGGAGACTTGTCCAGCAAAGTATCACATTTCTTCTTGCACTaGTTTCAGTTTTTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSRRHTTLKRGDLSSKVSHFFLH*FQFFFH Trigger: ATGGAAGAAAAACTGAAAGCAGTGCAAGAAGAAATG...TGATACTTTGCTGGACAAGTCTCCCCTTTTTAATGTAGTGTGTCTTCTAGAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS-3UTR CCA 90 bp | CTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCTTCCGGATTATTTCCTaGTGCTTTTCTTTTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LCTFLVNYIYSYVCFPVPFRIIS*CFSFSM Trigger: CATTGAAAAAGAAAAGCACCAGGAAATAATCCGGAA...GGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR GCA 90 bp | AGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCATTTCTTCTTGCACTaGTTTCAGTTTTTCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFVHFLLTTSTAMFVSRYHFFLH*FQFFFH Trigger: ATGGAAGAAAAACTGAAAGCAGTGCAAGAAGAAATG...GTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 90 bp | GGAAAGGGCAGGCAGTCCCGAGCTGCTGACCTTCTTGAGCTTATCTaGGGTCGGGGAAGCTGTGGGTTTTGGCAGTCCACGCAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKGRQSRAADLLELI*GRGSCGFWQSTQAG Trigger: CCCAGCCTGCGTGGACTGCCAAAACCCACAGCTTCCCCGACCCCAGATAAGCTCAAGAAGGTCAGCAGCTCGGGACTGCCTGCCCTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 90 bp | CCTCCTGCGAAGGATGGCTGTCAACCTCTGCCTGGCCTCGTTTACTaGAATTGCTCGGCCCCTGGGAGGATATGCCTGGGAAAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPAKDGCQPLPGLVY*NCSAPGRICLGKGR Trigger: CCTGCCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAAACGAGGCCAGGCAGAGGTTGACAGCCATCCTTCGCAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | AGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCCTCCTGAAGAGCTGCTGACCTTCTaGAGCTTATCTGGGGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCPAVKGCVSRGWDPPEELLTF*SLSGVG Trigger: CCCGACCCCAGATAAGCTCAAGAAGGTCAGCAGCTC...TTCAGGAGGGTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | CCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGTGCCGGGCTCTTTCCTaGCTGAGCTCAGCTTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PVTVSLCPAVKGCVSRGWCRALS*LSSASI Trigger: GATTGAAGCTGAGCTCAGCAAGGAAAGAGCCCGGCA...CCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 90 bp | ACTGCTGACTCAACCTCCTGCGAAGGATGGCTGTCAACCTCTGCCTaGCCTCGTTTACTGAAATTGCTCGGCCCCTGGGAGGATATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TADSTSCEGWLSTSA*PRLLKLLGPWEDMP Trigger: AGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAAACGAGGCCAGGCAGAGGTTGACAGCCATCCTTCGCAGGAGGTTGAGTCAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 90 bp | TGCGCACGGTTTCCTGGAGAAAAGTGTTCTCTTCCTGTGACTGGCTaGACTGCTGCAGCAGCTGTGTCTGGGCCAGCCTTACTCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CARFPGEKCSLPVTG*TAAAAVSGPALLFP Trigger: TGGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCAGTTCAGCCAGTCACAGGAAGAGAACACTTTTCTCCAGGAAACCGTGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | AGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCCTCCTGAACTTGTCTTTCTTTTGTaGTCAGCTCTTCCTGTACGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCPAVKGCVSRGWDPPELVFLL*SALPVR Trigger: CCGTACAGGAAGAGCTGACAACAAAAGAAAGACAAG...TTCAGGAGGGTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | ACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGACCCTCAGGTCCTCATGTTCTaGCTGATACTTCCGGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: TVSLCPAVKGCVSRGWDPQVLMF*LILPDY Trigger: ATAATCCGGAAGTATCAGCAAGAACATGAGGACCTG...AGGGTCCCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | TACCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGGTTAGGGTGCCCTTATaGAGGGAACACGGTAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YPVTVSLCPAVKGCVSRGVRVPL*REHGKF Trigger: AAACTTACCGTGTTCCCTCAATAAGGGCACCCTAAC...CCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 90 bp | GTTTCCTGGAGAAAAGTGTTCTCTTCCTGTGACTGGCTGAACTGCTaGAGCAGCTGTGTCTGGGCCAGCCTTACTCTTTCCAGCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSWRKVFSSCDWLNC*SSCVWASLTLSSSS Trigger: AGACGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCAGTTCAGCCAGTCACAGGAAGAGAACACTTTTCTCCAGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | TATGTTTGTTTCCCGGTACCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGCCTCGTTTACTGAAATaGCTCGGCCCCTGGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YVCFPVPGYSESLPCCERPRLLK*LGPWED Trigger: ATCCTCCCAGGGGCCGAGCAATTTCAGTAAACGAGG...CCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGGTACCGGGAAACAAACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 90 bp | GTGTTCTCTTCCTGTGACTGGCTGAACTGCTGCAGCAGCTGTGTCTaGGCCAGCCTTACTCTTTCCAGCTCGTCTGACTTCTGTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VFSSCDWLNCCSSCV*ASLTLSSSSDFCFI Trigger: AATGAAACAGAAGTCAGACGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCAGTTCAGCCAGTCACAGGAAGAGAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | CCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGGGCATCCGACAACAATTaGAGACTTTTCATTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVTVSLCPAVKGCVSRGWASDNN*RLFISS Trigger: AGAGGAAATGAAAAGTCTCAAATTGTTGTCGGATGC...CCACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 90 bp | TCTGCAGCTCATAGCACCTGGCTTGCAAGTTCACTTCATGCTGTTTaGATGCCTCCATCTGCTGAGACCTCAATATGGCTGCATCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: SAAHSTWLASSLHAV*MPPSAETSIWLHPT Trigger: TGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCATCCAAACAGCATGAAGTGAACTTGCAAGCCAGGTGCTATGAGCTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | CCCGGTTACAGTGAGTCTCTGCCCTGCTGTGAAAGGGTGTGTGTCCCGTGGGTGTTTTTAACTGTATGCTaGCATCTTCAACTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGYSESLPCCERVCVPWVFLTVC*HLQLLP Trigger: AGGCAAGAGTTGAAGATGCAAGCATACAGTTAAAAA...CACCCACGGGACACACACCCTTTCACAGCAGGGCAGAGACTCACTGTAACCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 90 bp | CAGCTCATAGCACCTGGCTTGCAAGTTCACTTCATGCTGTTTGGATaGCTCCATCTGCTGAGACCTCAATATGGCTGCATCCGACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: QLIAPGLQVHFMLFG*LHLLRPQYGCIRQQ Trigger: TTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCATCCAAACAGCATGAAGTGAACTTGCAAGCCAGGTGCTATGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 90 bp | CTTGACTCAAAGCCTCCGTTAGTTCAAAGCGTTCTTCACACTCTCTaGGCACGGTTTCCTGGAGAAAAGTGTTCTCTTCCTGTGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDSKPPLVQSVLHTL*ARFPGEKCSLPVTG Trigger: GCCAGTCACAGGAAGAGAACACTTTTCTCCAGGAAACCGTGCGCAGAGAGTGTGAAGAACGCTTTGAACTAACGGAGGCTTTGAGTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 90 bp | TCAGACTCTTCTGTGTATTGTGCATGGGATTCATGCAGTTTTTCTTaGAGAGAGGCCACTTCCAGCCTCAGGTCCTTTGTAGCATCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SDSSVYCAWDSCSFS*REATSSLRSFVASA Trigger: CGCAGATGCTACAAAGGACCTGAGGCTGGAAGTGGCCTCTCTCCAAGAAAAACTGCATGAATCCCATGCACAATACACAGAAGAGTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 90 bp | CTGGCTTGCAAGTTCACTTCATGCTGTTTGGATGCCTCCATCTGCTaGGACCTCAATATGGCTGCATCCGACAACAATTTGAGACTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LACKFTSCCLDASIC*DLNMAASDNNLRLF Trigger: GAAAAGTCTCAAATTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCATCCAAACAGCATGAAGTGAACTTGCAAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 90 bp | CATCGCTCAGCAGCTTCTGTCTCAGGGTTTCCTGCAGCTGCTCGATaGTTTTCTGATGAGAAACCAGCATCAATTCCCTTTCATTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRSAASVSGFPAAAR*FSDEKPASIPFHFS Trigger: TGAAAAATGAAAGGGAATTGATGCTGGTTTCTCATCAGAAAAGCATCGAGCAGCTGCAGGAAACCCTGAGACAGAAGCTGCTGAGCGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 90 bp | TTCATGCTGTTTGGATGCCTCCATCTGCTGAGACCTCAATATGGCTaGATCCGACAACAATTTGAGACTTTTCATTTCCTCTTCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FMLFGCLHLLRPQYG*IRQQFETFHFLFQA Trigger: TGCCTGGAAGAGGAAATGAAAAGTCTCAAATTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCATCCAAACAGCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | CACAGCAAAGGATATAGAGAAATATATAGCTGGCCTGGAATTCTCAGCGCTTCTTCCGACCTTGCCTTCTaGGACTCGCTGTCACTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HSKGYREIYSWPGILSASSDLAF*DSLSLL Trigger: TAAAAGTGACAGCGAGTCCAAGAAGGCAAGGTCGGA...AGAAGCGCTGAGAATTCCAGGCCAGCTATATATTTCTCTATATCCTTTGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTTTGAAAACTGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTAAGCATCTCCTTACAGTaGTCCAGCTCCTTTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPFENCGFTVPSFVHFLLSISLQ*SSSFAV Trigger: GACAGCAAAGGAGCTGGACAACTGTAAGGAGATGCT...TAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACAGTTTTCAAAGGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 90 bp | GCGATTAGGTCACCTATCTTCCTCTGCAGGTCCTCATGTTCTTGCTaGTACTTCCGGATTATTTCCTGGTGCTTTTCTTTTTCAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AIRSPIFLCRSSCSC*YFRIISWCFSFSMS Trigger: TGACATTGAAAAAGAAAAGCACCAGGAAATAATCCGGAAGTATCAGCAAGAACATGAGGACCTGCAGAGGAAGATAGGTGACCTAATCGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTTTGAAAACTGTGGCTTCACAGTTCCTAGCTTTGTACATTTCTTGTTATTCATGCAGTTTTTCTaGGAGAGAGGCCACTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPFENCGFTVPSFVHFLLFMQFF*ERGHFQ Trigger: CTGGAAGTGGCCTCTCTCCAAGAAAAACTGCATGAA...TAACAAGAAATGTACAAAGCTAGGAACTGTGAAGCCACAGTTTTCAAAGGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | AGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACAGTTGTCCAGCTCCTTaGCTGTCTTCTGAAGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFVHFLLTTSTAMFVSRYSCPAP*LSSEVS Trigger: TGAGACTTCAGAAGACAGCAAAGGAGCTGGACAACT...GTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACCCGGTTACAGTCTTAAAGAGAAGAGCTaGATCCTGGAACTCAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLVNYIYSYVCFPVPGYSLKEKS*ILELNE Trigger: CTCATTGAGTTCCAGGATCAAGCTCTTCTCTTTAAG...ACTGTAACCGGGTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS-3UTR CAA 90 bp | AGCTTTGTACATTTCTTGTTAACTACATCTACAGCTATGTTTGTTTCCCGGTACTCAACTCTTCGGAAATaGAATCATCACGGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFVHFLLTTSTAMFVSRYSTLRK*NHHGQF Trigger: AAACTGGCCGTGATGATTCAATTTCCGAAGAGTTGA...GTACCGGGAAACAAACATAGCTGTAGATGTAGTTAACAAGAAATGTACAAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 72 bp | AAGCTGTGGGTTTTGGCAGTCCACGCAGGCTGGGCGTaGCGGTGCCTCGTCCACAGTTCTGTCTCCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: KLWVLAVHAGWA*RCLVHSSVSHC Trigger: GCAGTGGGAGACAGAACTGTGGACGAGGCACCGGCACGCCCAGCCTGCGTGGACTGCCAAAACCCACAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 72 bp | TGGGTTTTGGCAGTCCACGCAGGCTGGGCGTGCCGGTaGCTCGTCCACAGTTCTGTCTCCCACTGCTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WVLAVHAGWACR*LVHSSVSHCLA Trigger: AGCTAAGCAGTGGGAGACAGAACTGTGGACGAGGCACCGGCACGCCCAGCCTGCGTGGACTGCCAAAACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CAA 90 bp | TGCGAAGGATGGCTGTCAACCTCTGCCTGGCCTCGTTTACTGAAATaGCTCGGCCCCTGGGAGGATATGCCTGGGAAAGGGCAGGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CEGWLSTSAWPRLLK*LGPWEDMPGKGQAV Trigger: GACTGCCTGCCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAAACGAGGCCAGGCAGAGGTTGACAGCCATCCTTCGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 72 bp | TTTACTGAAATTGCTCGGCCCCTGGGAGGATATGCCTaGGAAAGGGCAGGCAGTCCCGAGCTGCTGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTEIARPLGGYA*ERAGSPELLTF Trigger: GAAGGTCAGCAGCTCGGGACTGCCTGCCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CAA 72 bp | TGGCTGTCAACCTCTGCCTGGCCTCGTTTACTGAAATaGCTCGGCCCCTGGGAGGATATGCCTGGGAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLSTSAWPRLLK*LGPWEDMPGKG Trigger: CCCTTTCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAAACGAGGCCAGGCAGAGGTTGACAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 72 bp | AAGGATGGCTGTCAACCTCTGCCTGGCCTCGTTTACTaGAATTGCTCGGCCCCTGGGAGGATATGCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KDGCQPLPGLVY*NCSAPGRICLG Trigger: TCCCAGGCATATCCTCCCAGGGGCCGAGCAATTTCAGTAAACGAGGCCAGGCAGAGGTTGACAGCCATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 72 bp | TCCTGTGACTGGCTGAACTGCTGCAGCAGCTGTGTCTaGGCCAGCCTTACTCTTTCCAGCTCGTCTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SCDWLNCCSSCV*ASLTLSSSSDF Trigger: GAAGTCAGACGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCAGTTCAGCCAGTCACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 72 bp | CCGCTCCTCCTGAGCTCCAGGAGCTGTTCTTTGGCTTaGCTCAAAGCCTCCGTTAGTTCAAAGCGTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLLLSSRSCSLA*LKASVSSKRSS Trigger: TGAAGAACGCTTTGAACTAACGGAGGCTTTGAGTCAAGCCAAAGAACAGCTCCTGGAGCTCAGGAGGAGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 72 bp | AGAAAAGTGTTCTCTTCCTGTGACTGGCTGAACTGCTaGAGCAGCTGTGTCTGGGCCAGCCTTACTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RKVFSSCDWLNC*SSCVWASLTLS Trigger: GGAAAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCAGTTCAGCCAGTCACAGGAAGAGAACACTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 72 bp | TGGAGAAAAGTGTTCTCTTCCTGTGACTGGCTGAACTaGTGCAGCAGCTGTGTCTGGGCCAGCCTTACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: WRKVFSSCDWLN*CSSCVWASLTL Trigger: AAGAGTAAGGCTGGCCCAGACACAGCTGCTGCAGCAGTTCAGCCAGTCACAGGAAGAGAACACTTTTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 72 bp | GCACCTGGCTTGCAAGTTCACTTCATGCTGTTTGGATaGCTCCATCTGCTGAGACCTCAATATGGCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: APGLQVHFMLFG*LHLLRPQYGCI Trigger: GATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCATCCAAACAGCATGAAGTGAACTTGCAAGCCAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 72 bp | CTGTGTCTGGGCCAGCCTTACTCTTTCCAGCTCGTCTaGCTTCTGTTTCATTTCCTTCTTCAACTCTTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LCLGQPYSFQLV*LLFHFLLQLFG Trigger: TCCGAAGAGTTGAAGAAGGAAATGAAACAGAAGTCAGACGAGCTGGAAAGAGTAAGGCTGGCCCAGACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 72 bp | GCAGCTTCTGTCTCAGGGTTTCCTGCAGCTGCTCGATaGTTTTCTGATGAGAAACCAGCATCAATTCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AASVSGFPAAAR*FSDEKPASIPF Trigger: AAAGGGAATTGATGCTGGTTTCTCATCAGAAAAGCATCGAGCAGCTGCAGGAAACCCTGAGACAGAAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 72 bp | AAGCCTCCGTTAGTTCAAAGCGTTCTTCACACTCTCTaGGCACGGTTTCCTGGAGAAAAGTGTTCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KPPLVQSVLHTL*ARFPGEKCSLP Trigger: AGGAAGAGAACACTTTTCTCCAGGAAACCGTGCGCAGAGAGTGTGAAGAACGCTTTGAACTAACGGAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 72 bp | TCTGTGTATTGTGCATGGGATTCATGCAGTTTTTCTTaGAGAGAGGCCACTTCCAGCCTCAGGTCCTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SVYCAWDSCSFS*REATSSLRSFV Trigger: TACAAAGGACCTGAGGCTGGAAGTGGCCTCTCTCCAAGAAAAACTGCATGAATCCCATGCACAATACACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CAA 72 bp | TTCTGTGTATTGTGCATGGGATTCATGCAGTTTTTCTaGGAGAGAGGCCACTTCCAGCCTCAGGTCCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FCVLCMGFMQFF*ERGHFQPQVLC Trigger: ACAAAGGACCTGAGGCTGGAAGTGGCCTCTCTCCAAGAAAAACTGCATGAATCCCATGCACAATACACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 72 bp | AAGTTCACTTCATGCTGTTTGGATGCCTCCATCTGCTaGGACCTCAATATGGCTGCATCCGACAACAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: KFTSCCLDASIC*DLNMAASDNNL Trigger: CAAATTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCATCCAAACAGCATGAAGTGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS GCA 72 bp | TTTGGATGCCTCCATCTGCTGAGACCTCAATATGGCTaGATCCGACAACAATTTGAGACTTTTCATTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FGCLHLLRPQYG*IRQQFETFHFL Trigger: GAGGAAATGAAAAGTCTCAAATTGTTGTCGGATGCAGCCATATTGAGGTCTCAGCAGATGGAGGCATCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CAA 90 bp | AATTTCAGGCATGTACCACCATGCCACCCAAATCTACTGTTTGCCTaGAAACTAAATAAGAGACAGGAAACATACTCCGACCTTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NFRHVPPCHPNLLFA*KLNKRQETYSDLAF Trigger: GAAGGCAAGGTCGGAGTATGTTTCCTGTCTCTTATTTAGTTTCAAGGCAAACAGTAGATTTGGGTGGCATGGTGGTACATGCCTGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS TCA 72 bp | TCACCTATCTTCCTCTGCAGGTCCTCATGTTCTTGCTaGTACTTCCGGATTATTTCCTGGTGCTTTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPIFLCRSSCSC*YFRIISWCFSF Trigger: AAAAGAAAAGCACCAGGAAATAATCCGGAAGTATCAGCAAGAACATGAGGACCTGCAGAGGAAGATAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 72 bp | ATAAGAGACAGGAAACATACTCCGACCTTGCCTTCTTaGACTCGCTGTCACTTTTATACTGTTCAAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IRDRKHTPTLPS*TRCHFYTVQTP Trigger: AGGAGTTTGAACAGTATAAAAGTGACAGCGAGTCCAAGAAGGCAAGGTCGGAGTATGTTTCCTGTCTCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS CAA 72 bp | AATAAGAGACAGGAAACATACTCCGACCTTGCCTTCTaGGACTCGCTGTCACTTTTATACTGTTCAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: NKRQETYSDLAF*DSLSLLYCSNS Trigger: GGAGTTTGAACAGTATAAAAGTGACAGCGAGTCCAAGAAGGCAAGGTCGGAGTATGTTTCCTGTCTCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099075.4 |
||
| CDS CAA 90 bp | GCTCGTCTGACTTCTGTTTCATTTCCTTCTTCAACTCTTCGGAAATaGAATCATCACGGCCAGTTTCCTGTTTCAAACGACACTGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: ARLTSVSFPSSTLRK*NHHGQFPVSNDTGI Trigger: AATTCCAGTGTCGTTTGAAACAGGAAACTGGCCGTGATGATTCAATTTCCGAAGAGTTGAAGAAGGAAATGAAACAGAAGTCAGACGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 72 bp | GAATCATCACGGCCAGTTTCCTGTTTCAAACGACACTaGAATTCTGCTACCAGATTTTTCAGGTCTTCAATT | + |
|
Preference number: 6 (lower is better) Translates to: ESSRPVSCFKRH*NSATRFFRSSI Trigger: AATTGAAGACCTGAAAAATCTGGTAGCAGAATTCCAGTGTCGTTTGAAACAGGAAACTGGCCGTGATGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS TCA 72 bp | CTTCTGTTTCATTTCCTTCTTCAACTCTTCGGAAATTaGATCATCACGGCCAGTTTCCTGTTTCAAACGACA | + |
|
Preference number: 6 (lower is better) Translates to: LLFHFLLQLFGN*IITASFLFQTT Trigger: TGTCGTTTGAAACAGGAAACTGGCCGTGATGATTCAATTTCCGAAGAGTTGAAGAAGGAAATGAAACAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CCA 72 bp | TTAACTGTATGCTTGCATCTTCAACTCTTGCCTTCTTaGACTCGCTGTCACTTTTATACTGTTCAAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LTVCLHLQLLPS*TRCHFYTVQTP Trigger: AGGAGTTTGAACAGTATAAAAGTGACAGCGAGTCCAAGAAGGCAAGAGTTGAAGATGCAAGCATACAGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||
| CDS CAA 72 bp | TTTAACTGTATGCTTGCATCTTCAACTCTTGCCTTCTaGGACTCGCTGTCACTTTTATACTGTTCAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FNCMLASSTLAF*DSLSLLYCSNS Trigger: GGAGTTTGAACAGTATAAAAGTGACAGCGAGTCCAAGAAGGCAAGAGTTGAAGATGCAAGCATACAGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177434.3 |
||