Pregenerated sensors for LEF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027985Ensembl transcript IDs: ENSMUST00000029611.14, ENSMUST00000066849.13, ENSMUST00000098611.4, ENSMUST00000106341.9
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTaGAGACAGTCTGGGGTTTCAACAAGCTTCCATCTCCAGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GKVAVSVPWGQPGKL*RQSGVSTSFHLQKR Trigger: CCTCTTCTGGAGATGGAAGCTTGTTGAAACCCCAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR GCA 90 bp | TTTCCGAAACAACCGTTTTCGGCTTTCTTTTTGGAAGTCGGCGCTTaGAGTAGACGACAGAAGGAAGAGGTGGCAGTGACTGTGTCTTCG | + |
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Preference number: 1 (lower is better) Translates to: FPKQPFSAFFLEVGA*SRRQKEEVAVTVSS Trigger: CGAAGACACAGTCACTGCCACCTCTTCCTTCTGTCGTCTACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAAACGGTTGTTTCGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGAGGAAGAGGTGGCAGTaGCTGTGTCTTCGGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GRVTGQHRRCWRIAQRPERKRWQ*LCLRVS Trigger: GCTGACCCGAAGACACAGTCACTGCCACCTCTTCCT...CTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGCTCCAGAAGAGGGCCTaGGGTCGCTGCCTTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: SLRKGDRSAQKMLEDRTELQKRA*GRCLGF Trigger: AAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAG...CTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGGCTGTCAGTGTTCCTTaGGGTCAGCCGGGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SLRKGDRSAQKMLEDRTEAVSVP*GQPGKL Trigger: CAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGC...CTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR GCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCAGGGCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGG | + |
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Preference number: 2 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSRAWGR*LGFARW Trigger: CCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCT...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTCTTCGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGTCGCTGCCTTGGCTTTaGACGTTGGGAAGGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LCLRVSASSDLRVRLLSVSLPWL*TLGRSF Trigger: GAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGA...CACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCGAAGACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR TCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCAGGAAGAGGTGGCAGTaGCTGTGTCTTCGGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSRKRWQ*LCLRVS Trigger: GCTGACCCGAAGACACAGTCACTGCCACCTCTTCCT...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR GCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCGGTCCTGTCTGTCCTTaGGGAAGGGTGACAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSGPVCP*GRVTGQ Trigger: CTGACCTGTCACCCTTCCGCAAGGACAGACAGGACC...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR GCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCTCGCTGCCTTGGCTTTaGACGTTGGGAAGGAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSSLPWL*TLGRSF Trigger: GAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGA...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCCTTGGCTTTGCACGTTaGGAAGGAGCTTCTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRLGFAR*EGASLT Trigger: GGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAG...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTCTTCGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGGCTGTGGAGACAGTCTaGGGTTTCAACAAGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LCLRVSASSDLRVRLLSVAVETV*GFNKLP Trigger: TGGAAGCTTGTTGAAACCCCAGACTGTCTCCACAGC...CACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCGAAGACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGGCTGTGGAGACAGTCTaGGGTTTCAACAAGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SLRKGDRSAQKMLEDRTEAVETV*GFNKLP Trigger: TGGAAGCTTGTTGAAACCCCAGACTGTCTCCACAGC...CTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCGGGCAAGCTGTGGAGACAGTCTGGGGTTTCAACAAGCTTCCATCTCCAGACTTGGCTTTGCACGTTaGGAAGGAGCTTCTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: SRASCGDSLGFQQASISRLGFAR*EGASLT Trigger: GGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAG...TCTGGAGATGGAAGCTTGTTGAAACCCCAGACTGTCTCCACAGCTTGCCCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | CGAAACAACCGTTTTCGGCTTTCTTTTTGGAAGTCGGCGCTTGCAGTAGACGACCAGCCGGGCAAGCTGTaGAGACAGTCTGGGGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: RNNRFRLSFWKSALAVDDQPGKL*RQSGVS Trigger: TGAAACCCCAGACTGTCTCCACAGCTTGCCCGGCTG...GTCGTCTACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAAACGGTTGTTTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCCTTGGCTTTGCACGTTaGGAAGGAGCTTCTCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSLGFAR*EGASLT Trigger: GGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAG...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATACTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: RKMKTGARGVFHNSHTRILGSLP*LCTLGR Trigger: CCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | CAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCAGAGGCTGTGCCTTCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: QTGMTNVKMTSLGQRLCLLGSLP*LCTLGR Trigger: CCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...AAGGCACAGCCTCTGCCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | CAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCAGAGGCTGTGCCTTCTCCAGAAGAGGGCCTaGGGTCGCTGCCTTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QTGMTNVKMTSLGQRLCLLQKRA*GRCLGF Trigger: AAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAG...AAGGCACAGCCTCTGCCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATAAGGAAGAGGTGGCAGTaGCTGTGTCTTCGGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RKMKTGARGVFHNSHTRIRKRWQ*LCLRVS Trigger: GCTGACCCGAAGACACAGTCACTGCCACCTCTTCCT...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGAGGGCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGRAWGR*LGFARW Trigger: CCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCT...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATACAGCACAGAAGATGCTaGAGGATCGCACAGAGACCG | + |
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Preference number: 2 (lower is better) Translates to: RKMKTGARGVFHNSHTRIQHRRC*RIAQRP Trigger: CGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTG...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGAGGAAGAGGTGGCAGTaGCTGTGTCTTCGGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGRKRWQ*LCLRVS Trigger: GCTGACCCGAAGACACAGTCACTGCCACCTCTTCCT...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR TCA 90 bp | CAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCAGAGGCTGTGCCTTATTTGGATAGGAAAATaGAGACAGGAGCGAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QTGMTNVKMTSLGQRLCLIWIGK*RQEREE Trigger: CTCCTCTCGCTCCTGTCTTCATTTTCCTATCCAAAT...AAGGCACAGCCTCTGCCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCTTTCTAGTTGCACGTaGCAAGGCAAACACAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGLSSCT*QGKHSQ Trigger: TTGGCTGTGTTTGCCTTGTCACGTGCAACTAGAAAG...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGTTTCGGCTTTCTTTTTaGAAGTCGGCGCTTGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGFRLSF*KSALAV Trigger: TACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAA...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAACAATTCAAGTGCTGGGCTTTTTACAGGAGTGAAAAGAAAGAGATTACAGCACAGAAGATGCTaGAGGATCGCACAGAGACCG | + |
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Preference number: 2 (lower is better) Translates to: RKNNSSAGLFTGVKRKRLQHRRC*RIAQRP Trigger: CGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTG...TAATCTCTTTCTTTTCACTCCTGTAAAAAGCCCAGCACTTGAATTGTTCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAACAATTCAAGTGCTGGGCTTTTTACAGGAGTGAAAAGAAAGAGATTAATTTGGATAGGAAAATaGAGACAGGAGCGAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: RKNNSSAGLFTGVKRKRLIWIGK*RQEREE Trigger: CTCCTCTCGCTCCTGTCTTCATTTTCCTATCCAAAT...TAATCTCTTTCTTTTCACTCCTGTAAAAAGCCCAGCACTTGAATTGTTCTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGGCTCATTTTAACAACTaGCATAAATTCCCACTAATC | + |
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Preference number: 2 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGAHFNN*HKFPLI Trigger: GATTAGTGGGAATTTATGCCAGTTGTTAAAATGAGC...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR GCA 72 bp | TGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATaGTGGAGGATCGCACAGAGACCGGAGGCAGTGCCG | + |
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Preference number: 3 (lower is better) Translates to: CPCGRVTGQHRR*WRIAQRPEAVP Trigger: CGGCACTGCCTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGCCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SLRKGDRSAQKMLEDRTEPGVAA*ALHVGK Trigger: CTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGG...CTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCTGCTGTCAGTGTTCCTaGGGGTCAGCCGGGCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRCCQCS*GSAGQA Trigger: AGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCA...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCGTCGCTGCCTTGGCTTaGCACGTTGGGAAGGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRVAALA*HVGKEL Trigger: AAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGAC...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGGTCGCTGCCTTGGCTTaGCACGTTGGGAAGGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SLRKGDRSAQKMLEDRTEVAALA*HVGKEL Trigger: AAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGAC...CTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGGACCTCAGGGTAAGGTaGCTGTCAGTGTTCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: GRVTGQHRRCWRIAQRPEDLRVR*LSVFLG Trigger: CCCAAGGAACACTGACAGCAACCTTACCCTGAGGTC...CTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR-3UTR CAA 90 bp | TCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGGACCTCAGGGTAAGGTaGCTGTCAGTGTTCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLRKGDRSAQKMLEDRTEDLRVR*LSVFLG Trigger: CCCAAGGAACACTGACAGCAACCTTACCCTGAGGTC...CTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR TCA 72 bp | AACACAGCCAAGGTCCTGTCTGTCCTTGCGGAAGGGTaGCAGGTCAGCACAGAAGATGCTGGAGGATCGCAC | + |
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Preference number: 3 (lower is better) Translates to: NTAKVLSVLAEG*QVSTEDAGGSH Trigger: GTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACAGGACCTTGGCTGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| 3UTR GCA 72 bp | TCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAAGGAGCTTCTCTTACCACCATGTT | + |
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Preference number: 3 (lower is better) Translates to: SPEEGLGSLPWL*TLGRSFSYHHV Trigger: AACATGGTGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR GCA 72 bp | ACAAGCTTCCATCTCCAGAAGAGGGCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGGGAAGGAGCTTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: TSFHLQKRAWGR*LGFARWEGASL Trigger: AAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGGAAGCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR CCA 72 bp | GCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTaGAGACAGTCTGGGGTTTCAACAAGCTTCCATCTC | + |
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Preference number: 3 (lower is better) Translates to: AVSVPWGQPGKL*RQSGVSTSFHL Trigger: GAGATGGAAGCTTGTTGAAACCCCAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| 3UTR-3UTR CAA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATATGCTGTCAGTGTTCCTaGGGGTCAGCCGGGCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RKMKTGARGVFHNSHTRICCQCS*GSAGQA Trigger: AGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCA...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | CGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGAGCGGGTGGACCGCGTaGGAGGGCTGCACCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVSASSDLRVRLLSVFLGSGWTA*EGCTTG Trigger: GCCCGTGGTGCAGCCCTCTCACGCGGTCCACCCGCT...CCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCAGCGGGTGGACCGCGTaGGAGGGCTGCACCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRSGWTA*EGCTTG Trigger: GCCCGTGGTGCAGCCCTCTCACGCGGTCCACCCGCT...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGAGCTTCTGGATCATCTCATCGGTaGCGCAGAGTTCCGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKRAWGRCLGFARWEGASGSSHR*RRVPGP Trigger: GGGACCCGGAACTCTGCGCCACCGATGAGATGATCC...AGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 |
||
| CDS-3UTR CCA 90 bp | CCATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGTTGCCAGCCAATGGGTaGGGTGATCTGTCCAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPEEGLGSLPWLCTLGRLPANG*GDLSNA Trigger: GGCGTTGGACAGATCACCCCACCCATTGGCTGGCAA...CCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000098611.4 |
||
| CDS-3UTR TCA 90 bp | CCATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGGATCGCCTTCGTCCTTaGAGGGGATCATCTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPEEGLGSLPWLCTLGRDRLRP*RGSSHR Trigger: CCGATGAGATGATCCCCTTCAAGGACGAAGGCGATC...CCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCTTCGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGAGGGCCTGGGGTCGCTaGCTTGGCTTTGCACGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVSASSDLRVRLLSVRAWGR*LGFARW Trigger: CCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCT...CACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCGAAGACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCGGATCATCTCATCGGTaGCGCAGAGTTCCGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDLRVRLLSVFLGVSRASGSSHR*RRVPGP Trigger: GGGACCCGGAACTCTGCGCCACCGATGAGATGATCC...GCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGGGGTGGGATGTGTGACGGGTaGGATCCCGGAGAAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCQCSLGSAGQAVETVWGGMCDG*DPGEKC Trigger: GCACTTTTCTCCGGGATCCCACCCGTCACACATCCC...ACCCCAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGAGCTTCTAGGTCACTGTCCGTGTaGGGGTGCTCCTGTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: QKRAWGRCLGFARWEGASRSLSV*GCSCLT Trigger: GGTCAAACAGGAGCACCCCCACACGGACAGTGACCT...AGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR TCA 90 bp | AGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCCCCTCCTCTTCGGGATaGCTGATCTCGGCGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SDLRVRLLSVFLGVSRASPSSSG*LISAKI Trigger: GATCTTCGCCGAGATCAGTCATCCCGAAGAGGAGGG...GCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGGCATGTCTGACCACCTCATaGCCGTTGCTGGCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RVTGQHRRCWRIAQRPEACLTTS*PLLAGM Trigger: CATCCCAGCCAGCAACGGGCATGAGGTGGTCAGACA...TGCCTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGGGGTCATCAGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCQCSLGSAGQAVETVWGHQGVL*PCRGRA Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCTGATG...ACCCCAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCGGGATGTGTGACGGGTaGGATCCCGGAGAAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLRVRLLSVFLGVSRASGMCDG*DPGEKC Trigger: GCACTTTTCTCCGGGATCCCACCCGTCACACATCCC...GCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGGCAGGGATGTGTGACGGGTaGGATCCCGGAGAAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVTGQHRRCWRIAQRPEAGMCDG*DPGEKC Trigger: GCACTTTTCTCCGGGATCCCACCCGTCACACATCCC...TGCCTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGTTGCCAGCCAATGGGTaGGGTGATCTGTCCAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLLSVFLGVSRASCGDSLLPANG*GDLSNA Trigger: GGCGTTGGACAGATCACCCCACCCATTGGCTGGCAA...CAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000098611.4 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCCTGGGGTCGCTGCCTTaGCTTTGCACGTTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRLGSLP*LCTLGR Trigger: CCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAG...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGATCGCCTTCGTCCTTaGAGGGGATCATCTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRVRLLSVFLGVSRASCGDRLRP*RGSSHR Trigger: CCGATGAGATGATCCCCTTCAAGGACGAAGGCGATC...TCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGTGTCTGACCACCTCATaGCCGTTGCTGGCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLRKGDRSAQKMLEDRTECLTTS*PLLAGM Trigger: CATCCCAGCCAGCAACGGGCATGAGGTGGTCAGACA...CTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR GCA 90 bp | CCATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGGGTCTTTTGGGCTCCTaGTCCTTTCTCTGTTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPEEGLGSLPWLCTLGRGLLGS*SFLCSC Trigger: ACACGAACAGAGAAAGGAGCAGGAGCCCAAAAGACC...CCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| CDS-3UTR CCA 90 bp | AGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGCATCAGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLSVFLGVSRASCGDSLHQGVL*PCRGRA Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCTGATG...CAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGCATCAGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRVTGQHRRCWRIAQRPEHQGVL*PCRGRA Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCTGATG...CTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR CCA 90 bp | AGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGAGCTTCTCGTACAGGCCTCCGTCTaGATGCTTTCCTTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGPGVAALALHVGKELLVQASV*MLSFIR Trigger: CCTGATGAAGGAAAGCATCCAGACGGAGGCCTGTAC...GAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR CCA 90 bp | CCATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGTGTAGCCAGAGTAACTaGAGTAGGAGGGTCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPEEGLGSLPWLCTLGRCSQSN*SRRVPC Trigger: ACAAGGGACCCTCCTACTCCAGTTACTCTGGCTACA...CCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
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| CDS-3UTR CCA 90 bp | CTGTGTCTTCGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGGGGATGTGTGACGGGTaGGATCCCGGAGAAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVSASSDLRVRLLSVGMCDG*DPGEKC Trigger: GCACTTTTCTCCGGGATCCCACCCGTCACACATCCC...CACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCGAAGACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR CCA 90 bp | CGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGACAGGGGGTAGAAGGTaGGGATTTCAGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSASSDLRVRLLSVFLGTGGRR*GFQELE Trigger: CTCCAGCTCCTGAAATCCCCACCTTCTACCCCCTGT...CCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR CCA 90 bp | AGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGAGCTTCTCGGGAAAACCTGGACATaGAAGTGTCGCCTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRGPGVAALALHVGKELLGKTWT*KCRLTV Trigger: CACTGTCAGGCGACACTTCCATGTCCAGGTTTTCCC...GAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000098611.4 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCAGGTCACTGTCCGTGTaGGGGTGCTCCTGTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRRSLSV*GCSCLT Trigger: GGTCAAACAGGAGCACCCCCACACGGACAGTGACCT...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTTCGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGAGGTCACTGTCCGTGTaGGGGTGCTCCTGTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVSASSDLRVRLLSVRSLSV*GCSCLT Trigger: GGTCAAACAGGAGCACCCCCACACGGACAGTGACCT...CACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCGAAGACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGAAACCAGCCAATGGGTaGGGTGATCTGTCCAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLLSVFLGVSRASCGDSLKPANG*GDLSNA Trigger: GGCGTTGGACAGATCACCCCACCCATTGGCTGGTTT...CAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| 3UTR CAA 72 bp | GCTTCCATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAAGGAGCTTCTCTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASISRRGPGVAA*ALHVGKELLLP Trigger: TGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR TCA 90 bp | AGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCCCTCTTCGGGATGACTaGTCTCGGCGAAGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDLRVRLLSVFLGVSRASPLRDD*SRRRSS Trigger: AGAAGATCTTCGCCGAGATCAGTCATCCCGAAGAGG...GCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGAGCTTCTCGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGPGVAALALHVGKELLVTIAG*GMPVVW Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...GAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR GCA 90 bp | AGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCAGGCCTCCGTCTGGATaGTTTCCTTCATCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLRVRLLSVFLGVSRASRPPSG*FPSSGC Trigger: ACACCCTGATGAAGGAAAGCATCCAGACGGAGGCCT...GCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAATGCCCGTTGCTGGCTaGGATGATTTCGGACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRVRLLSVFLGVSRASCGMPVAG*DDFGLV Trigger: AACGAGTCCGAAATCATCCCAGCCAGCAACGGGCAT...TCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCGTACAGGCCTCCGTCTaGATGCTTTCCTTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLRVRLLSVFLGVSRASVQASV*MLSFIR Trigger: CCTGATGAAGGAAAGCATCCAGACGGAGGCCTGTAC...GCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCCTCCAGAAGAGGGCCTaGGGTCGCTGCCTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSLQKRA*GRCLGF Trigger: AAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAG...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| 3UTR CAA 72 bp | ATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAAGGAGCTTCTCTTACCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ISRRGPGVAALA*HVGKELLLPPC Trigger: ACATGGTGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR TCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGAGCGGGTGGACCGCGTaGGAGGGCTGCACCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGSGWTA*EGCTTG Trigger: GCCCGTGGTGCAGCCCTCTCACGCGGTCCACCCGCT...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLSVFLGVSRASCGDSLVTIAG*GMPVVW Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...CAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVTGQHRRCWRIAQRPEVTIAG*GMPVVW Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...CTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGAGCTTCTCTGCTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRGPGVAALALHVGKELLCSCLT*GVTIAG Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAGCA...GAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGAGCTTCTCAGAGGCTTCTTAATATaGGGTCTTTTGGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRGPGVAALALHVGKELLRGFLI*GLLGSC Trigger: GCAGGAGCCCAAAAGACCTCATATTAAGAAGCCTCT...GAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGATAATTGTCTCGCGCTaGCCAGCCTGGATAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVTGQHRRCWRIAQRPEIIVSR*PAWIKL Trigger: CAGCTTTATCCAGGCTGGTCAGCGCGAGACAATTAT...CTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | CGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGATAATTGTCTCGCGCTaGCCAGCCTGGATAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVSASSDLRVRLLSVFLGIIVSR*PAWIKL Trigger: CAGCTTTATCCAGGCTGGTCAGCGCGAGACAATTAT...CCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCAGGCCTCCGTCTGGATaGTTTCCTTCATCAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRRPPSG*FPSSGC Trigger: ACACCCTGATGAAGGAAAGCATCCAGACGGAGGCCT...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGGGTCTTTTGGGCTCCTaGTCCTTTCTCTGTTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLLSVFLGVSRASCGDSLGLLGS*SFLCSC Trigger: ACACGAACAGAGAAAGGAGCAGGAGCCCAAAAGACC...CAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGGCATGTAGCCAGAGTAACTaGAGTAGGAGGGTCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVTGQHRRCWRIAQRPEACSQSN*SRRVPC Trigger: ACAAGGGACCCTCCTACTCCAGTTACTCTGGCTACA...TGCCTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGGGGAAAACCTGGACATaGAAGTGTCGCCTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRKGDRSAQKMLEDRTEGKTWT*KCRLTV Trigger: CACTGTCAGGCGACACTTCCATGTCCAGGTTTTCCC...CTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000098611.4 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCAGGCAGCTGTCATTCTaGGACCTGTACCTGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRRQLSF*DLYLKS Trigger: CGACTTCAGGTACAGGTCCCAGAATGACAGCTGCCT...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR CCA 90 bp | CGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGCTTGGCTTTGCACGTTaGGAAGGAGCTTCTCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: RVSASSDLRVRLLSVFLGLGFAR*EGASLT Trigger: GGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAG...CCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | CTGTGTCTTCGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGGTTACAATAGCTGGATaGGGGATGCCAGTTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVSASSDLRVRLLSVVTIAG*GMPVVW Trigger: CCACACAACTGGCATCCCTCATCCAGCTATTGTAAC...CACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCGAAGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGTGCTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLSVFLGVSRASCGDSLCSCLT*GVTIAG Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAGCA...CAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | AGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCAGAGGCTTCTTAATATaGGGTCTTTTGGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLRVRLLSVFLGVSRASRGFLI*GLLGSC Trigger: GCAGGAGCCCAAAAGACCTCATATTAAGAAGCCTCT...GCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCACAGGGGGTAGAAGGTaGGGATTTCAGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSTGGRR*GFQELE Trigger: CTCCAGCTCCTGAAATCCCCACCTTCTACCCCCTGT...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGCCGGGCAAGCTGTGGAGACAGTCTGGGGTTTCAACAAGCTTCCATCTCCAGAAGGCAGCTGTCATTCTaGGACCTGTACCTGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRASCGDSLGFQQASISRRQLSF*DLYLKS Trigger: CGACTTCAGGTACAGGTCCCAGAATGACAGCTGCCT...TCTGGAGATGGAAGCTTGTTGAAACCCCAGACTGTCTCCACAGCTTGCCCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR CCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCAAACCAGCCAATGGGTaGGGTGATCTGTCCAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSKPANG*GDLSNA Trigger: GGCGTTGGACAGATCACCCCACCCATTGGCTGGTTT...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCAGAGGCTTCTTAATATaGGGTCTTTTGGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRRGFLI*GLLGSC Trigger: GCAGGAGCCCAAAAGACCTCATATTAAGAAGCCTCT...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCGGACCAGGAATCATATaGTGGGAAAACCAGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRGPGII*WENQPM Trigger: CATTGGCTGGTTTTCCCATCATATGATTCCTGGTCC...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGGTCGCTGTTCATATTaGGCATCATTATGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSASSDLRVRLLSVFLGGRCSY*ASLCSQ Trigger: CTGGCTACATAATGATGCCCAATATGAACAGCGACC...CCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCTATGATGGGAAAACCTaGACATGGAAGTGTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRYDGKT*TWKCRL Trigger: CAGGCGACACTTCCATGTCCAGGTTTTCCCATCATA...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000098611.4 |
||
| CDS-3UTR TCA 90 bp | CGAAACAACCGTTTTCGGCTTTCTTTTTGGAAGTCGGCGCTTGCAGTAGACGACGATCGCCTTCGTCCTTaGAGGGGATCATCTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: RNNRFRLSFWKSALAVDDDRLRP*RGSSHR Trigger: CCGATGAGATGATCCCCTTCAAGGACGAAGGCGATC...GTCGTCTACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAAACGGTTGTTTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCATAATTGTCTCGCGCTaGCCAGCCTGGATAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSIIVSR*PAWIKL Trigger: CAGCTTTATCCAGGCTGGTCAGCGCGAGACAATTAT...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR GCA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCTCCTCTTCTTCTTCTTaGCATAATTGTCTCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRSSSSS*HNCLAL Trigger: CAGCGCGAGACAATTATGGCAAGAAGAAGAAGAGGA...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR CCA 90 bp | CGAAACAACCGTTTTCGGCTTTCTTTTTGGAAGTCGGCGCTTGCAGTAGACGACCATCAGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNNRFRLSFWKSALAVDDHQGVL*PCRGRA Trigger: AGCCCTACCACGACAAGGCCAGAGAACACCCTGATG...GTCGTCTACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAAACGGTTGTTTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR TCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATACCCTCCTCTTCGGGATaGCTGATCTCGGCGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: RKMKTGARGVFHNSHTRIPSSSG*LISAKI Trigger: GATCTTCGCCGAGATCAGTCATCCCGAAGAGGAGGG...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
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| CDS-3UTR GCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATATGTCTGACCACCTCATaGCCGTTGCTGGCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RKMKTGARGVFHNSHTRICLTTS*PLLAGM Trigger: CATCCCAGCCAGCAACGGGCATGAGGTGGTCAGACA...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CGAAACAACCGTTTTCGGCTTTCTTTTTGGAAGTCGGCGCTTGCAGTAGACGACATGCCCGTTGCTGGCTaGGATGATTTCGGACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RNNRFRLSFWKSALAVDDMPVAG*DDFGLV Trigger: AACGAGTCCGAAATCATCCCAGCCAGCAACGGGCAT...GTCGTCTACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAAACGGTTGTTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CGAAACAACCGTTTTCGGCTTTCTTTTTGGAAGTCGGCGCTTGCAGTAGACGACGTACAGGCCTCCGTCTaGATGCTTTCCTTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNNRFRLSFWKSALAVDDVQASV*MLSFIR Trigger: CCTGATGAAGGAAAGCATCCAGACGGAGGCCTGTAC...GTCGTCTACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAAACGGTTGTTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR CCA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCTATGATGGGAAAACCTaGACATGGAAGTGTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSYDGKT*TWKCRL Trigger: CAGGCGACACTTCCATGTCCAGGTTTTCCCATCATA...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000098611.4 |
||
| CDS-3UTR CCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATAACAGGGGGTAGAAGGTaGGGATTTCAGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKMKTGARGVFHNSHTRITGGRR*GFQELE Trigger: CTCCAGCTCCTGAAATCCCCACCTTCTACCCCCTGT...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR TCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATACCTCTTCGGGATGACTaGTCTCGGCGAAGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKMKTGARGVFHNSHTRIPLRDD*SRRRSS Trigger: AGAAGATCTTCGCCGAGATCAGTCATCCCGAAGAGG...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCCCTCCTCTTCGGGATaGCTGATCTCGGCGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGPSSSG*LISAKI Trigger: GATCTTCGCCGAGATCAGTCATCCCGAAGAGGAGGG...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | CGAAACAACCGTTTTCGGCTTTCTTTTTGGAAGTCGGCGCTTGCAGTAGACGACTGCTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RNNRFRLSFWKSALAVDDCSCLT*GVTIAG Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAGCA...GTCGTCTACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAAACGGTTGTTTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | CGAAACAACCGTTTTCGGCTTTCTTTTTGGAAGTCGGCGCTTGCAGTAGACGACAGAGGCTTCTTAATATaGGGTCTTTTGGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNNRFRLSFWKSALAVDDRGFLI*GLLGSC Trigger: GCAGGAGCCCAAAAGACCTCATATTAAGAAGCCTCT...GTCGTCTACTGCAAGCGCCGACTTCCAAAAAGAAAGCCGAAAACGGTTGTTTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATAATGCCCGTTGCTGGCTaGGATGATTTCGGACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKMKTGARGVFHNSHTRIMPVAG*DDFGLV Trigger: AACGAGTCCGAAATCATCCCAGCCAGCAACGGGCAT...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATAAGGCAGCTGTCATTCTaGGACCTGTACCTGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RKMKTGARGVFHNSHTRIRQLSF*DLYLKS Trigger: CGACTTCAGGTACAGGTCCCAGAATGACAGCTGCCT...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR GCA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATAGGTCTTTTGGGCTCCTaGTCCTTTCTCTGTTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKMKTGARGVFHNSHTRIGLLGS*SFLCSC Trigger: ACACGAACAGAGAAAGGAGCAGGAGCCCAAAAGACC...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCAGAGGCTGTGCCTTGGTCTTTTGGGCTCCTaGTCCTTTCTCTGTTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTGMTNVKMTSLGQRLCLGLLGS*SFLCSC Trigger: ACACGAACAGAGAAAGGAGCAGGAGCCCAAAAGACC...AAGGCACAGCCTCTGCCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCAGAGGCTGTGCCTTTGTAGCCAGAGTAACTaGAGTAGGAGGGTCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTGMTNVKMTSLGQRLCLCSQSN*SRRVPC Trigger: ACAAGGGACCCTCCTACTCCAGTTACTCTGGCTACA...AAGGCACAGCCTCTGCCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGGTACAGGCCTCCGTCTaGATGCTTTCCTTCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGVQASV*MLSFIR Trigger: CCTGATGAAGGAAAGCATCCAGACGGAGGCCTGTAC...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR GCA 90 bp | CAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCAGAGGCTGTGCCTTTCCTCTTCTTCTTCTTaGCATAATTGTCTCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTGMTNVKMTSLGQRLCLSSSSS*HNCLAL Trigger: CAGCGCGAGACAATTATGGCAAGAAGAAGAAGAGGA...AAGGCACAGCCTCTGCCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | AATTTGGATAGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACTGCTCCTGTTTGACCTaGGGTGTTACAATAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLDRKMKTGARGVFHNSHCSCLT*GVTIAG Trigger: TCCAGCTATTGTAACACCTCAGGTCAAACAGGAGCA...GTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCTATCCAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS-3UTR CCA 90 bp | AGAAAGAACAATTCAAGTGCTGGGCTTTTTACAGGAGTGAAAAGAAAGAGATTAAGGTCACTGTCCGTGTaGGGGTGCTCCTGTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: RKNNSSAGLFTGVKRKRLRSLSV*GCSCLT Trigger: GGTCAAACAGGAGCACCCCCACACGGACAGTGACCT...TAATCTCTTTCTTTTCACTCCTGTAAAAAGCCCAGCACTTGAATTGTTCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGCACGTTAACTCAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGTCCTCTTCTTCTTCTTaGCATAATTGTCTCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTLTQTGMTNVKMTSLGSSSSS*HNCLAL Trigger: CAGCGCGAGACAATTATGGCAAGAAGAAGAAGAGGA...CCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTGAGTTAACGTGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAACAATTCAAGTGCTGGGCTTTTTACAGGAGTGAAAAGAAAGAGATTAACAGGGGGTAGAAGGTaGGGATTTCAGGAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKNNSSAGLFTGVKRKRLTGGRR*GFQELE Trigger: CTCCAGCTCCTGAAATCCCCACCTTCTACCCCCTGT...TAATCTCTTTCTTTTCACTCCTGTAAAAAGCCCAGCACTTGAATTGTTCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAACAATTCAAGTGCTGGGCTTTTTACAGGAGTGAAAAGAAAGAGATTAGGACCAGGAATCATATaGTGGGAAAACCAGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RKNNSSAGLFTGVKRKRLGPGII*WENQPM Trigger: CATTGGCTGGTTTTCCCATCATATGATTCCTGGTCC...TAATCTCTTTCTTTTCACTCCTGTAAAAAGCCCAGCACTTGAATTGTTCTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAACAATTCAAGTGCTGGGCTTTTTACAGGAGTGAAAAGAAAGAGATTAGGTCGCTGTTCATATTaGGCATCATTATGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKNNSSAGLFTGVKRKRLGRCSY*ASLCSQ Trigger: CTGGCTACATAATGATGCCCAATATGAACAGCGACC...TAATCTCTTTCTTTTCACTCCTGTAAAAAGCCCAGCACTTGAATTGTTCTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGGGGTGATGAGGGATGCCAGTaGTGTGGGGGCCAGGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CCQCSLGSAGQAVETVWGDEGCQ*CGGQGD Trigger: GTCCCCCTGGCCCCCACACAACTGGCATCCCTCATC...ACCCCAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGGATGAGGGATGCCAGTaGTGTGGGGGCCAGGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLLSVFLGVSRASCGDSLDEGCQ*CGGQGD Trigger: GTCCCCCTGGCCCCCACACAACTGGCATCCCTCATC...CAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGACTGAGAGGACGGGGCTaGTCTGACCACCTCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRVRLLSVFLGVSRASCGLRGRG*SDHLMP Trigger: GGGCATGAGGTGGTCAGACAAGCCCCGTCCTCTCAG...TCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTCCTTGCGGAAGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCGATGAGGGATGCCAGTaGTGTGGGGGCCAGGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CLSLRKGDRSAQKMLEDRDEGCQ*CGGQGD Trigger: GTCCCCCTGGCCCCCACACAACTGGCATCCCTCATC...GCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCTTCCGCAAGGACAGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGACCTGGGGTCGCTGCCTaGGCTTTGCACGTTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRVRLLSVFLGVSRASCGPGVAA*ALHVGK Trigger: CTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGG...TCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCTTACCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTTGGGAAGGAGCTTCTCACCACCTCATGCCCGTaGCTGGCTGGGATGATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRGPGVAALALHVGKELLTTSCP*LAGMIS Trigger: CGAAATCATCCCAGCCAGCAACGGGCATGAGGTGGT...GAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 |
||
| CDS-3UTR CAA 90 bp | AGGTTGCTGTCAGTGTTCCTTGGGGTCAGCCGGGCAAGCTGTGGAGACAGTCTGACCACCTCATGCCCGTaGCTGGCTGGGATGATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLLSVFLGVSRASCGDSLTTSCP*LAGMIS Trigger: CGAAATCATCCCAGCCAGCAACGGGCATGAGGTGGT...CAGACTGTCTCCACAGCTTGCCCGGCTGACCCCAAGGAACACTGACAGCAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTGACAGGTCAGCACAGAAGATGCTGGAGGATCGCACAGAGACCGGAGGCAACCACCTCATGCCCGTaGCTGGCTGGGATGATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RVTGQHRRCWRIAQRPEATTSCP*LAGMIS Trigger: CGAAATCATCCCAGCCAGCAACGGGCATGAGGTGGT...TGCCTCCGGTCTCTGTGCGATCCTCCAGCATCTTCTGTGCTGACCTGTCACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCCTGAGAGGACGGGGCTaGTCTGACCACCTCATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSLRGRG*SDHLMP Trigger: GGGCATGAGGTGGTCAGACAAGCCCCGTCCTCTCAG...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | CGGGTCAGCGCTAGCAGTGACCTCAGGGTAAGGTTGCTGTCAGTGTTCCTTGGGCTGGACATGCCTTGCTaGGAGTTGACATCTGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVSASSDLRVRLLSVFLGLDMPC*ELTSDG Trigger: CCCGTCAGATGTCAACTCCAAGCAAGGCATGTCCAG...CCCAAGGAACACTGACAGCAACCTTACCCTGAGGTCACTGCTAGCGCTGACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS GCA 90 bp | AAGCTTCCATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAAGGAGCTTCTCTTACCACCTGAAGTCGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLPSPEEGLGSLPWL*TLGRSFSYHLKSTP Trigger: AGGAGTCGACTTCAGGTGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGGAAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | AGCCGGGCAAGCTGTGGAGACAGTCTGGGGTTTCAACAAGCTTCCATCTCCAGACTGGACATGCCTTGCTaGGAGTTGACATCTGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRASCGDSLGFQQASISRLDMPC*ELTSDG Trigger: CCCGTCAGATGTCAACTCCAAGCAAGGCATGTCCAG...TCTGGAGATGGAAGCTTGTTGAAACCCCAGACTGTCTCCACAGCTTGCCCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 |
||
| CDS-3UTR CAA 90 bp | GACGGGCTGCCAAATGTGACCACCAACAGGAGTGGGTTTGGCTATCTCTTTAGCGTCGCTGCCTTGGCTTaGCACGTTGGGAAGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DGLPNVTTNRSGFGYLFSVAALA*HVGKEL Trigger: AAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGAC...GCTAAAGAGATAGCCAAACCCACTCCTGTTGGTGGTCACATTTGGCAGCCCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS TCA 90 bp | ACCAAAGATGACTTGATGTCGGCTAAGTCGCCCTCCTCTTCGGGATaGCTGATCTCGGCGAAGATCTTCTCCTTCTGGGGATCGCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TKDDLMSAKSPSSSG*LISAKIFSFWGSPS Trigger: CGAAGGCGATCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGTCATCCCGAAGAGGAGGGCGACTTAGCCGACATCAAGTCATCTTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
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| CDS-3UTR CAA 90 bp | AGGAAAATGAAGACAGGAGCGAGAGGAGTCTTCCACAATTCTCACACCAGGATAGATGAGGGATGCCAGTaGTGTGGGGGCCAGGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RKMKTGARGVFHNSHTRIDEGCQ*CGGQGD Trigger: GTCCCCCTGGCCCCCACACAACTGGCATCCCTCATC...TATCCTGGTGTGAGAATTGTGGAAGACTCCTCTCGCTCCTGTCTTCATTTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS CCA 90 bp | ACGGGTCGCTGTTCATATTGGGCATCATTATGTAGCCAGAGTAACTaGAGTAGGAGGGTCCCTTGTTGTACAGGCCTCCGTCTGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: TGRCSYWASLCSQSN*SRRVPCCTGLRLDA Trigger: AGCATCCAGACGGAGGCCTGTACAACAAGGGACCCTCCTACTCCAGTTACTCTGGCTACATAATGATGCCCAATATGAACAGCGACCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS CCA 90 bp | GTGGAGAAAGGGACCCATTTGACATGTACGGGTCGCTGTTCATATTaGGCATCATTATGTAGCCAGAGTAACTGGAGTAGGAGGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VEKGTHLTCTGRCSY*ASLCSQSNWSRRVP Trigger: AGGGACCCTCCTACTCCAGTTACTCTGGCTACATAATGATGCCCAATATGAACAGCGACCCGTACATGTCAAATGGGTCCCTTTCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | CAAACTGGAATGACAAACGTTAAGATGACAAGTTTGGGGCAGAGGCTGTGCCTTCTGGACATGCCTTGCTaGGAGTTGACATCTGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTGMTNVKMTSLGQRLCLLDMPC*ELTSDG Trigger: CCCGTCAGATGTCAACTCCAAGCAAGGCATGTCCAG...AAGGCACAGCCTCTGCCCCAAACTTGTCATCTTAACGTTTGTCATTCCAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAACAATTCAAGTGCTGGGCTTTTTACAGGAGTGAAAAGAAAGAGATTACTGGACATGCCTTGCTaGGAGTTGACATCTGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKNNSSAGLFTGVKRKRLLDMPC*ELTSDG Trigger: CCCGTCAGATGTCAACTCCAAGCAAGGCATGTCCAG...TAATCTCTTTCTTTTCACTCCTGTAAAAAGCCCAGCACTTGAATTGTTCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS CAA 72 bp | GGCCTTGTCGTGGTAGGGCTCCTGAGAGGACGGGGCTaGTCTGACCACCTCATGCCCGTTGCTGGCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLVVVGLLRGRG*SDHLMPVAGWD Trigger: ATCCCAGCCAGCAACGGGCATGAGGTGGTCAGACAAGCCCCGTCCTCTCAGGAGCCCTACCACGACAAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS CCA 72 bp | TCTGTCCAACGCCGCCCGGAGACAGGGGGTAGAAGGTaGGGATTTCAGGAGCTGGAGGGTGTCTGGACATGC | + |
|
Preference number: 6 (lower is better) Translates to: SVQRRPETGGRR*GFQELEGVWTC Trigger: GCATGTCCAGACACCCTCCAGCTCCTGAAATCCCCACCTTCTACCCCCTGTCTCCGGGCGGCGTTGGACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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| CDS CCA 72 bp | CTCCGTCTGGATGCTTTCCTTCATCAGGGTGTTCTCTaGCCTTGTCGTGGTAGGGCTCCTGAGAGGACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRLDAFLHQGVL*PCRGRAPERTG Trigger: CCCCGTCCTCTCAGGAGCCCTACCACGACAAGGCCAGAGAACACCCTGATGAAGGAAAGCATCCAGACGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS CAA 90 bp | CCATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTaGGGAAGGAGCTTCTCTTACCACCTGAAGTCGACTCCTGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPEEGLGSLPWLCT*GRSFSYHLKSTPVA Trigger: AGCTACAGGAGTCGACTTCAGGTGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS CAA 90 bp | CAAGCTTCCATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAAGGAGCTTCTCTTACCACCTGAAGTCGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: QASISRRGPGVAALA*HVGKELLLPPEVDS Trigger: GGAGTCGACTTCAGGTGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGATGGAAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS GCA 72 bp | TCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTaGACGTTGGGAAGGAGCTTCTCTTACCACCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPEEGLGSLPWL*TLGRSFSYHLK Trigger: CTTCAGGTGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS CAA 72 bp | GAAGAGGGCCTGGGGTCGCTGCCTTGGCTTTGCACGTaGGGAAGGAGCTTCTCTTACCACCTGAAGTCGACT | + |
|
Preference number: 6 (lower is better) Translates to: EEGLGSLPWLCT*GRSFSYHLKST Trigger: AGTCGACTTCAGGTGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS TCA 72 bp | CGAAGATCTTCTCCTTCTGGGGATCGCCTTCGTCCTTaGAGGGGATCATCTCATCGGTGGCGCAGAGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RRSSPSGDRLRP*RGSSHRWRRVP Trigger: CGGAACTCTGCGCCACCGATGAGATGATCCCCTTCAAGGACGAAGGCGATCCCCAGAAGGAGAAGATCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS CAA 72 bp | ATCTCCAGAAGAGGGCCTGGGGTCGCTGCCTTGGCTTaGCACGTTGGGAAGGAGCTTCTCTTACCACCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ISRRGPGVAALA*HVGKELLLPPE Trigger: TTCAGGTGGTAAGAGAAGCTCCTTCCCAACGTGCAAAGCCAAGGCAGCGACCCCAGGCCCTCTTCTGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106341.9 |
||
| CDS TCA 72 bp | GACTTGATGTCGGCTAAGTCGCCCTCCTCTTCGGGATaGCTGATCTCGGCGAAGATCTTCTCCTTCTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: DLMSAKSPSSSG*LISAKIFSFWG Trigger: TCCCCAGAAGGAGAAGATCTTCGCCGAGATCAGTCATCCCGAAGAGGAGGGCGACTTAGCCGACATCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000106341.9 |
||
| CDS CAA 72 bp | TTGATGTCCTCGGGATGGGTGGAGAAAGGGACCCATTaGACATGTACGGGTCGCTGTTCATATTGGGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LMSSGWVEKGTH*TCTGRCSYWAS Trigger: TGATGCCCAATATGAACAGCGACCCGTACATGTCAAATGGGTCCCTTTCTCCACCCATCCCGAGGACATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS CCA 72 bp | GGGACCCATTTGACATGTACGGGTCGCTGTTCATATTaGGCATCATTATGTAGCCAGAGTAACTGGAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTHLTCTGRCSY*ASLCSQSNWSR Trigger: CCTACTCCAGTTACTCTGGCTACATAATGATGCCCAATATGAACAGCGACCCGTACATGTCAAATGGGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
||
| CDS CAA 90 bp | GCACTTTATTTGATGTCCTCGGGATGGGTGGAGAAAGGGACCCATTaGACATGTACGGGTCGCTGTTCATATTGGGCATCATTATGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALYLMSSGWVEKGTH*TCTGRCSYWASLCS Trigger: GCTACATAATGATGCCCAATATGAACAGCGACCCGTACATGTCAAATGGGTCCCTTTCTCCACCCATCCCGAGGACATCAAATAAAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029611.14 ENSMUST00000066849.13 ENSMUST00000098611.4 ENSMUST00000106341.9 |
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