Pregenerated sensors for LECT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021539Ensembl transcript IDs: ENSMUST00000062806.6, ENSMUST00000225183.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGATCTGGCCTTTGTCTCTGCTTACAGGTATGCTGTGGGGTCACTaGAGTCGCAGTTTTCAACGTGTACATGCGACTGGATGCCCGGGT | + |
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Preference number: 1 (lower is better) Translates to: KIWPLSLLTGMLWGH*SRSFQRVHATGCPG Trigger: ACCCGGGCATCCAGTCGCATGTACACGTTGAAAACTGCGACTCCAGTGACCCCACAGCATACCTGTAAGCAGAGACAAAGGCCAGATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR CCA 90 bp | AGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTGATGACTTaGAATCAGGGTTGTGAGTGTTTACACAGATTTATGTTTCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: RWQADQSPPVRAVMT*NQGCECLHRFMFLL Trigger: TAACAGAAACATAAATCTGTGTAAACACTCACAACCCTGATTCCAAGTCATCACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| 3UTR TCA 90 bp | CCAGAGCCCACCCGTCAGAGCGGTGATGACTTGGAATCAGGGTTGTaGGTGTTTACACAGATTTATGTTTCTGTTAGAATGCACGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: PEPTRQSGDDLESGL*VFTQIYVSVRMHVS Trigger: AGAAACGTGCATTCTAACAGAAACATAAATCTGTGTAAACACTCACAACCCTGATTCCAAGTCATCACCGCTCTGACGGGTGGGCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| 3UTR GCA 90 bp | AATCAGGGTTGTGAGTGTTTACACAGATTTATGTTTCTGTTAGAATaGACGTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGG | + |
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Preference number: 1 (lower is better) Translates to: NQGCECLHRFMFLLE*TFLREQGMSQFLRW Trigger: CCATCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAACGTGCATTCTAACAGAAACATAAATCTGTGTAAACACTCACAACCCTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAACTCCCTGGCCCTTGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGTACATGCGACTGGATaGCCGGGTAAACTTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SNSLALEVAGRPEPTRQSVHATG*PGKLSA Trigger: TGCAGAAAGTTTACCCGGGCATCCAGTCGCATGTAC...GCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGCCAGGGAGTTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR CAA 90 bp | CACGTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGGCTTaGAATTTAGAAGATCTGGCCTTTGTCTCTGCTTACAGGTATGCT | + |
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Preference number: 2 (lower is better) Translates to: HVSSGAGHVPVSEMA*NLEDLAFVSAYRYA Trigger: AGCATACCTGTAAGCAGAGACAAAGGCCAGATCTTCTAAATTCAAAGCCATCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAACGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGCCCTTGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTGATGGTTTCTGAGATGGCTTaGAATTTAGAAGATCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PWPLRWQADQSPPVRAVMVSEMA*NLEDLA Trigger: GGCCAGATCTTCTAAATTCAAAGCCATCTCAGAAAC...CATCACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGCCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| 3UTR CCA 72 bp | AAAAATCGAAAATGTCAAACTCCCTGGCCCTTGAGGTaGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTG | + |
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Preference number: 3 (lower is better) Translates to: KNRKCQTPWPLR*QADQSPPVRAV Trigger: CACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGCCAGGGAGTTTGACATTTTCGATTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| 3UTR TCA 72 bp | AACCTAAAAATCGAAAATGTCAAACTCCCTGGCCCTTaGGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: NLKIENVKLPGP*GGRPTRAHPSE Trigger: CTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGCCAGGGAGTTTGACATTTTCGATTTTTAGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| 3UTR GCA 72 bp | TGGAGTCGCAGTTTTCAACGTGTACATGCGACTGGATaGCCGGGTAAACTTTCTGCAGGGGCAGCAAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: WSRSFQRVHATG*PGKLSAGAARC Trigger: GCACCTTGCTGCCCCTGCAGAAAGTTTACCCGGGCATCCAGTCGCATGTACACGTTGAAAACTGCGACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR CCA 72 bp | CCTTTGTCTCTGCTTACAGGTATGCTGTGGGGTCACTaGAGTCGCAGTTTTCAACGTGTACATGCGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: PLSLLTGMLWGH*SRSFQRVHATG Trigger: TCCAGTCGCATGTACACGTTGAAAACTGCGACTCCAGTGACCCCACAGCATACCTGTAAGCAGAGACAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR GCA 72 bp | TTTAGAAGATCTGGCCTTTGTCTCTGCTTACAGGTATaGTGTGGGGTCACTGGAGTCGCAGTTTTCAACGTG | + |
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Preference number: 3 (lower is better) Translates to: FRRSGLCLCLQV*CGVTGVAVFNV Trigger: CACGTTGAAAACTGCGACTCCAGTGACCCCACAGCATACCTGTAAGCAGAGACAAAGGCCAGATCTTCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR CCA 72 bp | AAGATCTGGCCTTTGTCTCTGCTTACAGGTATGCTGTaGGGTCACTGGAGTCGCAGTTTTCAACGTGTACAT | + |
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Preference number: 3 (lower is better) Translates to: KIWPLSLLTGML*GHWSRSFQRVH Trigger: ATGTACACGTTGAAAACTGCGACTCCAGTGACCCCACAGCATACCTGTAAGCAGAGACAAAGGCCAGATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTTTGTCTCTGCTTACAGGTATGCTGTGGGGTCACTGGAGTCGCAGTTTTCAAGCTTCTCCCCCTTTTaGATAGAACCTTTATACTTA | + |
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Preference number: 3 (lower is better) Translates to: AFVSAYRYAVGSLESQFSSFSPF*IEPLYL Trigger: TAAGTATAAAGGTTCTATCAAAAAGGGGGAGAAGCT...TGAAAACTGCGACTCCAGTGACCCCACAGCATACCTGTAAGCAGAGACAAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR TCA 72 bp | ACCCGTCAGAGCGGTGATGACTTGGAATCAGGGTTGTaGGTGTTTACACAGATTTATGTTTCTGTTAGAATG | + |
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Preference number: 3 (lower is better) Translates to: TRQSGDDLESGL*VFTQIYVSVRM Trigger: CATTCTAACAGAAACATAAATCTGTGTAAACACTCACAACCCTGATTCCAAGTCATCACCGCTCTGACGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR GCA 90 bp | TCCCTGGCCCTTGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTGATGTACATGCGACTGGATaGCCGGGTAAACTTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SLALEVAGRPEPTRQSGDVHATG*PGKLSA Trigger: TGCAGAAAGTTTACCCGGGCATCCAGTCGCATGTAC...ATCACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGCCAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062806.6 |
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| CDS-3UTR CCA 90 bp | ACTCCCTGGCCCTTGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTGTATCTTCCCAGTGAATaGTGCATACACCACAGATCC | + |
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Preference number: 4 (lower is better) Translates to: TPWPLRWQADQSPPVRAVYLPSE*CIHHRS Trigger: GGATCTGTGGTGTATGCACCATTCACTGGGAAGATA...CACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGCCAGGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR GCA 90 bp | CCCTTGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTGATGACTTGGGTTGTAGTATGTGCCTaGAATCTCTGCCCTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PLRWQADQSPPVRAVMTWVVVCA*NLCPLP Trigger: TGGAAGAGGGCAGAGATTGCAGGCACATACTACAAC...CCAAGTCATCACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| CDS-3UTR TCA 90 bp | AACTCCCTGGCCCTTGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTGTCGAATGCCATCATTaGTGGCATTTTTGTTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: NSLALEVAGRPEPTRQSGVECHH*WHFCFY Trigger: ATAGAAACAAAAATGCCATCAATGATGGCATTCGAC...ACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGCCAGGGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR CCA 90 bp | CGACTGGATGCCCGGGTAAACTTTCTGCAGGGGCAGCAAGGTGCCCAGCTTCTCACGTCCGGATCTCGTTaGAAGATTTGCTGGCACATA | + |
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Preference number: 4 (lower is better) Translates to: RLDARVNFLQGQQGAQLLTSGSR*KICWHI Trigger: TATGTGCCAGCAAATCTTCCAACGAGATCCGGACGT...GAGAAGCTGGGCACCTTGCTGCCCCTGCAGAAAGTTTACCCGGGCATCCAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| 3UTR CAA 72 bp | GAACCTAAAAATCGAAAATGTCAAACTCCCTGGCCCTaGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: EPKNRKCQTPWP*RWQADQSPPVR Trigger: TCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGCCAGGGAGTTTGACATTTTCGATTTTTAGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR TCA 90 bp | GCCCTTGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTGATGACTTGGTCGAATGCCATCATTaGTGGCATTTTTGTTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: ALEVAGRPEPTRQSGDDLVECHH*WHFCFY Trigger: ATAGAAACAAAAATGCCATCAATGATGGCATTCGAC...CAAGTCATCACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR CCA 90 bp | GACCAGAGCCCACCCGTCAGAGCGGTGATGACTTGGAATCAGGGTTGTGAGTGTACGTCCGGATCTCGTTaGAAGATTTGCTGGCACATA | + |
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Preference number: 4 (lower is better) Translates to: DQSPPVRAVMTWNQGCECTSGSR*KICWHI Trigger: TATGTGCCAGCAAATCTTCCAACGAGATCCGGACGT...ACACTCACAACCCTGATTCCAAGTCATCACCGCTCTGACGGGTGGGCTCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR TCA 90 bp | TTCAACGTGTACATGCGACTGGATGCCCGGGTAAACTTTCTGCAGGGGCAGCAATGCCTTTGGGTTCTTTaGGCAGAGTACTGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: FNVYMRLDARVNFLQGQQCLWVL*AEYCPQ Trigger: CTGTGGACAGTACTCTGCTCAAAGAACCCAAAGGCA...TTGCTGCCCCTGCAGAAAGTTTACCCGGGCATCCAGTCGCATGTACACGTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| CDS-3UTR CCA 90 bp | TCTGTTAGAATGCACGTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGCAGGACGTCCACACCTaGGTGATGCCTTTGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SVRMHVSSGAGHVPVSEMQDVHT*VMPLGS Trigger: AGAACCCAAAGGCATCACCCAGGTGTGGACGTCCTG...CATCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAACGTGCATTCTAACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR TCA 90 bp | TTCAACGTGTACATGCGACTGGATGCCCGGGTAAACTTTCTGCAGGGGCAGCAAGGAAAGCAAAGCAGCTaGAATGAGGATTGTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: FNVYMRLDARVNFLQGQQGKQSS*NEDCCG Trigger: CCCACAACAATCCTCATTTCAGCTGCTTTGCTTTCC...TTGCTGCCCCTGCAGAAAGTTTACCCGGGCATCCAGTCGCATGTACACGTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGTTAGAATGCACGTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGACAGGACGTCCACACCTaGGTGATGCCTTTGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: FLLECTFLREQGMSQFLRQDVHT*VMPLGS Trigger: AGAACCCAAAGGCATCACCCAGGTGTGGACGTCCTG...TCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAACGTGCATTCTAACAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR GCA 90 bp | CTGTTAGAATGCACGTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGGCTTCCCAGTGAATGGTaGATACACCACAGATCCATC | + |
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Preference number: 4 (lower is better) Translates to: LLECTFLREQGMSQFLRWLPSEW*IHHRSI Trigger: GATGGATCTGTGGTGTATGCACCATTCACTGGGAAG...CCATCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAACGTGCATTCTAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR TCA 90 bp | TCTGTTAGAATGCACGTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGGGAAAGCAAAGCAGCTaGAATGAGGATTGTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SVRMHVSSGAGHVPVSEMGKQSS*NEDCCG Trigger: CCCACAACAATCCTCATTTCAGCTGCTTTGCTTTCC...CATCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAACGTGCATTCTAACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGTTAGAATGCACGTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGCCTTTGGGTTCTTTaGGCAGAGTACTGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: FLLECTFLREQGMSQFLRCLWVL*AEYCPQ Trigger: CTGTGGACAGTACTCTGCTCAAAGAACCCAAAGGCA...TCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAACGTGCATTCTAACAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| 3UTR CAA 72 bp | TCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGGCTTaGAATTTAGAAGATCTGGCCTTTGTCTCTGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: SGAGHVPVSEMA*NLEDLAFVSAY Trigger: GTAAGCAGAGACAAAGGCCAGATCTTCTAAATTCAAAGCCATCTCAGAAACTGGGACATGCCCTGCTCCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| CDS-3UTR TCA 90 bp | TCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGGCTTTGAATTTAGAAGATCCACTATCTTCCCAGTaGATGGTGCATACACCACAG | + |
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Preference number: 4 (lower is better) Translates to: SSGAGHVPVSEMALNLEDPLSSQ*MVHTPQ Trigger: CTGTGGTGTATGCACCATTCACTGGGAAGATAGTGG...ATCTTCTAAATTCAAAGCCATCTCAGAAACTGGGACATGCCCTGCTCCCGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR GCA 90 bp | TCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGGCTTTGAATTTAGAAGATGAGAGTTGTAGTATGTaGCTGCAATCTCTGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSGAGHVPVSEMALNLEDESCSM*LQSLPS Trigger: AGAGGGCAGAGATTGCAGGCACATACTACAACTCTC...ATCTTCTAAATTCAAAGCCATCTCAGAAACTGGGACATGCCCTGCTCCCGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| CDS-3UTR GCA 90 bp | TTACACAGATTTATGTTTCTGTTAGAATGCACGTTTCTTCGGGAGCAGGGCATGCTTCCCAGTGAATGGTaGATACACCACAGATCCATC | + |
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Preference number: 4 (lower is better) Translates to: LHRFMFLLECTFLREQGMLPSEW*IHHRSI Trigger: GATGGATCTGTGGTGTATGCACCATTCACTGGGAAG...CATGCCCTGCTCCCGAAGAAACGTGCATTCTAACAGAAACATAAATCTGTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS CCA 90 bp | TGGTGCATACACCACAGATCCATCCGAGCACAGGACGTCCACACCTaGGTGATGCCTTTGGGTTCTTTGAGCAGAGTACTGTCCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: WCIHHRSIRAQDVHT*VMPLGSLSRVLSTA Trigger: GGCTGTGGACAGTACTCTGCTCAAAGAACCCAAAGGCATCACCCAGGTGTGGACGTCCTGTGCTCGGATGGATCTGTGGTGTATGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR CAA 90 bp | CCCTTGAGGTGGCAGGCCGACCAGAGCCCACCCGTCAGAGCGGTGATGACTTGGAGCTTCTCCCCCTTTTaGATAGAACCTTTATACTTA | + |
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Preference number: 5 (lower is better) Translates to: PLRWQADQSPPVRAVMTWSFSPF*IEPLYL Trigger: TAAGTATAAAGGTTCTATCAAAAAGGGGGAGAAGCT...CCAAGTCATCACCGCTCTGACGGGTGGGCTCTGGTCGGCCTGCCACCTCAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062806.6 |
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| CDS-3UTR CAA 90 bp | TTTCTGTTAGAATGCACGTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGACACGTCCGGATCTCGTaGGAAGATTTGCTGGCACAT | + |
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Preference number: 5 (lower is better) Translates to: FLLECTFLREQGMSQFLRHVRIS*EDLLAH Trigger: ATGTGCCAGCAAATCTTCCAACGAGATCCGGACGTG...TCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAACGTGCATTCTAACAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTTCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGGCTTTGAATTTAGAACACGTCCGGATCTCGTaGGAAGATTTGCTGGCACAT | + |
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Preference number: 5 (lower is better) Translates to: VSSGAGHVPVSEMALNLEHVRIS*EDLLAH Trigger: ATGTGCCAGCAAATCTTCCAACGAGATCCGGACGTG...TTCTAAATTCAAAGCCATCTCAGAAACTGGGACATGCCCTGCTCCCGAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR CAA 90 bp | TCGGGAGCAGGGCATGTCCCAGTTTCTGAGATGGCTTTGAATTTAGAAGATCTGACCTGGGTGATGCCTTaGGGTTCTTTGAGCAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: SGAGHVPVSEMALNLEDLTWVMP*GSLSRV Trigger: TACTCTGCTCAAAGAACCCAAAGGCATCACCCAGGT...CAGATCTTCTAAATTCAAAGCCATCTCAGAAACTGGGACATGCCCTGCTCCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS-3UTR CAA 90 bp | GACCAGAGCCCACCCGTCAGAGCGGTGATGACTTGGAATCAGGGTTGTGAGTGTAGTCGAATGCCATCATaGATGGCATTTTTGTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: DQSPPVRAVMTWNQGCECSRMPS*MAFLFL Trigger: TAGAAACAAAAATGCCATCAATGATGGCATTCGACT...ACACTCACAACCCTGATTCCAAGTCATCACCGCTCTGACGGGTGGGCTCTGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS TCA 90 bp | GTGCCTGCAATCTCTGCCCTCTTCCAGACAGTCGAATGCCATCATTaGTGGCATTTTTGTTTCTATAGGGTTTCTCCTGGCCCACTATCT | + |
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Preference number: 5 (lower is better) Translates to: VPAISALFQTVECHH*WHFCFYRVSPGPLS Trigger: AGATAGTGGGCCAGGAGAAACCCTATAGAAACAAAAATGCCATCAATGATGGCATTCGACTGTCTGGAAGAGGGCAGAGATTGCAGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| CDS-3UTR CAA 90 bp | TTTCAACGTGTACATGCGACTGGATGCCCGGGTAAACTTTCTGCAGGGGCAGCAAGTCGAATGCCATCATaGATGGCATTTTTGTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: FQRVHATGCPGKLSAGAASRMPS*MAFLFL Trigger: TAGAAACAAAAATGCCATCAATGATGGCATTCGACT...TGCTGCCCCTGCAGAAAGTTTACCCGGGCATCCAGTCGCATGTACACGTTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| CDS-3UTR CAA 90 bp | CAGCAAGGTGCCCAGCTTCTCCCCCTTTTTGATAGAACCTTTATACTTAATTGGATGCCTTTGGGTTCTTaGAGCAGAGTACTGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: QQGAQLLPLFDRTFILNWMPLGS*SRVLST Trigger: TGTGGACAGTACTCTGCTCAAAGAACCCAAAGGCAT...CCAATTAAGTATAAAGGTTCTATCAAAAAGGGGGAGAAGCTGGGCACCTTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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| CDS-3UTR CAA 90 bp | AGAGCGGTGATGACTTGGAATCAGGGTTGTGAGTGTTTACACAGATTTATGTTTATGCCTTTGGGTTCTTaGAGCAGAGTACTGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: RAVMTWNQGCECLHRFMFMPLGS*SRVLST Trigger: TGTGGACAGTACTCTGCTCAAAGAACCCAAAGGCAT...AAACATAAATCTGTGTAAACACTCACAACCCTGATTCCAAGTCATCACCGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS CAA 90 bp | ATCCGAGCACAGGACGTCCACACCTGGGTGATGCCTTTGGGTTCTTaGAGCAGAGTACTGTCCACAGCCATAGCTGTCACACGTCCGGAT | + |
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Preference number: 6 (lower is better) Translates to: IRAQDVHTWVMPLGS*SRVLSTAIAVTRPD Trigger: ATCCGGACGTGTGACAGCTATGGCTGTGGACAGTACTCTGCTCAAAGAACCCAAAGGCATCACCCAGGTGTGGACGTCCTGTGCTCGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS CAA 90 bp | CACAGATCCATCCGAGCACAGGACGTCCACACCTGGGTGATGCCTTaGGGTTCTTTGAGCAGAGTACTGTCCACAGCCATAGCTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: HRSIRAQDVHTWVMP*GSLSRVLSTAIAVT Trigger: TGTGACAGCTATGGCTGTGGACAGTACTCTGCTCAAAGAACCCAAAGGCATCACCCAGGTGTGGACGTCCTGTGCTCGGATGGATCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS CAA 72 bp | CAGGACGTCCACACCTGGGTGATGCCTTTGGGTTCTTaGAGCAGAGTACTGTCCACAGCCATAGCTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: QDVHTWVMPLGS*SRVLSTAIAVT Trigger: TGTGACAGCTATGGCTGTGGACAGTACTCTGCTCAAAGAACCCAAAGGCATCACCCAGGTGTGGACGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS TCA 72 bp | TTCTATAGGGTTTCTCCTGGCCCACTATCTTCCCAGTaGATGGTGCATACACCACAGATCCATCCGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: FYRVSPGPLSSQ*MVHTPQIHPST Trigger: TGTGCTCGGATGGATCTGTGGTGTATGCACCATTCACTGGGAAGATAGTGGGCCAGGAGAAACCCTATAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062806.6 ENSMUST00000225183.2 |
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| CDS GCA 72 bp | CCAATAACAAGTGAAGTCATTGAGAGTTGTAGTATGTaGCTGCAATCTCTGCCCTCTTCCAGACAGTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: PITSEVIESCSM*LQSLPSSRQSN Trigger: ATTCGACTGTCTGGAAGAGGGCAGAGATTGCAGGCACATACTACAACTCTCAATGACTTCACTTGTTATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225183.2 |
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